Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442090 | sp|Q8VYR4|CSLG2_ARATH | 34.694 | 441 | 267 | 6 | 20 | 456 | 236 | 659 | 4.25e-93 | 301 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442090 | A0A7D3QB06 | 98.387 | 496 | 8 | 0 | 1 | 496 | 220 | 715 | 0.0 | 1017 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0208410 | Msa1442090 | 0.964141 | 5.910434e-123 | -8.615850e-47 |
| Msa0208430 | Msa1442090 | 0.935767 | 5.046770e-97 | -8.615850e-47 |
| Msa0209200 | Msa1442090 | 0.893429 | 6.339514e-75 | -8.615850e-47 |
| Msa0209220 | Msa1442090 | 0.805762 | 1.141592e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442090 | MtrunA17_Chr2g0307191 | 97.581 | 496 | 12 | 0 | 1 | 496 | 197 | 692 | 0.0 | 1009 |
| Msa1442090 | MtrunA17_Chr2g0298581 | 82.661 | 496 | 86 | 0 | 1 | 496 | 197 | 692 | 0.0 | 875 |
| Msa1442090 | MtrunA17_Chr3g0095791 | 81.452 | 496 | 92 | 0 | 1 | 496 | 196 | 691 | 0.0 | 858 |
| Msa1442090 | MtrunA17_Chr3g0077511 | 70.281 | 498 | 146 | 1 | 1 | 496 | 197 | 694 | 0.0 | 734 |
| Msa1442090 | MtrunA17_Chr4g0046401 | 43.711 | 485 | 262 | 3 | 18 | 494 | 231 | 712 | 2.95e-133 | 403 |
| Msa1442090 | MtrunA17_Chr1g0186381 | 41.152 | 486 | 268 | 5 | 20 | 494 | 233 | 711 | 1.02e-129 | 394 |
| Msa1442090 | MtrunA17_Chr3g0102531 | 33.547 | 468 | 286 | 5 | 34 | 494 | 257 | 706 | 3.85e-87 | 283 |
| Msa1442090 | MtrunA17_Chr3g0102541 | 32.914 | 477 | 293 | 8 | 29 | 496 | 253 | 711 | 7.82e-86 | 279 |
| Msa1442090 | MtrunA17_Chr3g0102551 | 32.051 | 468 | 293 | 5 | 34 | 496 | 268 | 715 | 1.65e-81 | 268 |
| Msa1442090 | MtrunA17_Chr8g0379241 | 29.231 | 520 | 308 | 7 | 30 | 495 | 435 | 948 | 6.85e-69 | 238 |
| Msa1442090 | MtrunA17_Chr8g0364641 | 30.667 | 525 | 305 | 12 | 20 | 495 | 426 | 940 | 9.61e-68 | 234 |
| Msa1442090 | MtrunA17_Chr2g0284211 | 28.244 | 524 | 311 | 7 | 30 | 495 | 420 | 936 | 2.60e-66 | 230 |
| Msa1442090 | MtrunA17_Chr4g0073711 | 27.536 | 552 | 330 | 9 | 1 | 495 | 459 | 997 | 5.91e-66 | 230 |
| Msa1442090 | MtrunA17_Chr4g0025201 | 29.615 | 493 | 325 | 12 | 19 | 493 | 227 | 715 | 2.10e-63 | 219 |
| Msa1442090 | MtrunA17_Chr2g0307231 | 94.118 | 102 | 6 | 0 | 112 | 213 | 1 | 102 | 3.26e-63 | 201 |
| Msa1442090 | MtrunA17_Chr2g0322361 | 29.713 | 488 | 324 | 9 | 20 | 490 | 234 | 719 | 5.61e-62 | 215 |
| Msa1442090 | MtrunA17_Chr1g0183381 | 27.462 | 528 | 323 | 11 | 20 | 495 | 344 | 863 | 1.83e-61 | 216 |
| Msa1442090 | MtrunA17_Chr2g0322371 | 29.857 | 489 | 319 | 10 | 20 | 490 | 227 | 709 | 2.35e-60 | 211 |
| Msa1442090 | MtrunA17_Chr2g0322351 | 30.165 | 484 | 305 | 14 | 25 | 488 | 234 | 704 | 1.21e-58 | 206 |
| Msa1442090 | MtrunA17_Chr2g0297351 | 27.606 | 518 | 313 | 15 | 33 | 494 | 474 | 985 | 9.62e-53 | 192 |
| Msa1442090 | MtrunA17_Chr5g0410641 | 25.670 | 522 | 323 | 12 | 34 | 495 | 567 | 1083 | 2.54e-52 | 191 |
| Msa1442090 | MtrunA17_Chr4g0039801 | 26.766 | 538 | 327 | 11 | 19 | 495 | 573 | 1104 | 5.49e-50 | 184 |
| Msa1442090 | MtrunA17_Chr1g0165411 | 27.096 | 513 | 318 | 10 | 34 | 495 | 558 | 1065 | 1.96e-49 | 182 |
| Msa1442090 | MtrunA17_Chr7g0269741 | 26.435 | 575 | 309 | 16 | 4 | 494 | 587 | 1131 | 5.51e-47 | 175 |
| Msa1442090 | MtrunA17_Chr2g0307221 | 90.667 | 75 | 7 | 0 | 268 | 342 | 1 | 75 | 2.32e-42 | 145 |
| Msa1442090 | MtrunA17_Chr8g0352231 | 26.536 | 358 | 240 | 8 | 144 | 495 | 697 | 1037 | 9.00e-35 | 139 |
| Msa1442090 | MtrunA17_Chr8g0352231 | 39.103 | 156 | 87 | 1 | 18 | 165 | 490 | 645 | 6.92e-32 | 130 |
| Msa1442090 | MtrunA17_Chr8g0383701 | 29.102 | 323 | 218 | 6 | 176 | 494 | 739 | 1054 | 2.31e-34 | 137 |
| Msa1442090 | MtrunA17_Chr8g0383701 | 38.854 | 157 | 87 | 2 | 18 | 165 | 508 | 664 | 7.83e-31 | 127 |
| Msa1442090 | MtrunA17_Chr7g0267731 | 26.769 | 325 | 224 | 7 | 176 | 494 | 628 | 944 | 2.77e-33 | 134 |
| Msa1442090 | MtrunA17_Chr7g0267731 | 37.576 | 165 | 89 | 2 | 1 | 157 | 391 | 549 | 2.01e-31 | 129 |
| Msa1442090 | MtrunA17_Chr2g0322331 | 28.395 | 324 | 222 | 8 | 171 | 488 | 29 | 348 | 2.91e-33 | 130 |
| Msa1442090 | MtrunA17_Chr2g0296991 | 25.309 | 324 | 231 | 5 | 176 | 495 | 687 | 1003 | 5.40e-33 | 133 |
| Msa1442090 | MtrunA17_Chr2g0296991 | 41.353 | 133 | 78 | 0 | 30 | 162 | 461 | 593 | 1.07e-31 | 129 |
| Msa1442090 | MtrunA17_Chr7g0274751 | 29.143 | 350 | 176 | 11 | 19 | 306 | 361 | 700 | 7.67e-33 | 132 |
| Msa1442090 | MtrunA17_Chr1g0201731 | 40.764 | 157 | 84 | 2 | 18 | 165 | 510 | 666 | 1.70e-32 | 132 |
| Msa1442090 | MtrunA17_Chr1g0201731 | 27.329 | 322 | 223 | 5 | 176 | 493 | 740 | 1054 | 1.28e-28 | 120 |
| Msa1442090 | MtrunA17_Chr3g0088821 | 26.687 | 326 | 225 | 7 | 176 | 495 | 720 | 1037 | 6.20e-32 | 130 |
| Msa1442090 | MtrunA17_Chr3g0088821 | 39.726 | 146 | 80 | 1 | 20 | 157 | 492 | 637 | 1.51e-31 | 129 |
| Msa1442090 | MtrunA17_Chr3g0078671 | 24.069 | 349 | 243 | 7 | 160 | 495 | 669 | 1008 | 1.22e-30 | 126 |
| Msa1442090 | MtrunA17_Chr3g0078671 | 39.490 | 157 | 86 | 2 | 18 | 165 | 457 | 613 | 1.53e-29 | 123 |
| Msa1442090 | MtrunA17_Chr3g0137951 | 26.524 | 328 | 223 | 7 | 176 | 495 | 728 | 1045 | 1.42e-30 | 126 |
| Msa1442090 | MtrunA17_Chr3g0137951 | 41.096 | 146 | 78 | 1 | 20 | 157 | 502 | 647 | 3.22e-29 | 122 |
| Msa1442090 | MtrunA17_Chr1g0165421 | 36.986 | 146 | 90 | 2 | 25 | 170 | 563 | 706 | 5.75e-26 | 112 |
| Msa1442090 | MtrunA17_Chr1g0165421 | 27.119 | 295 | 207 | 6 | 205 | 495 | 803 | 1093 | 4.53e-22 | 100 |
| Msa1442090 | MtrunA17_Chr2g0322341 | 43.636 | 110 | 58 | 1 | 20 | 125 | 234 | 343 | 5.44e-25 | 106 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1442090 | AT4G24000.2 | 34.459 | 444 | 270 | 6 | 20 | 459 | 44 | 470 | 2.46e-96 | 301 |
| Msa1442090 | AT4G23990.2 | 34.812 | 451 | 266 | 6 | 20 | 459 | 44 | 477 | 1.12e-94 | 297 |
| Msa1442090 | AT4G24000.1 | 34.694 | 441 | 267 | 6 | 20 | 456 | 236 | 659 | 4.32e-94 | 301 |
| Msa1442090 | AT4G24010.1 | 32.992 | 488 | 296 | 8 | 20 | 496 | 239 | 706 | 5.26e-94 | 301 |
| Msa1442090 | AT4G23990.1 | 34.812 | 451 | 266 | 6 | 20 | 459 | 258 | 691 | 5.35e-92 | 296 |
| Msa1442090 | AT1G55850.1 | 31.381 | 478 | 295 | 6 | 25 | 494 | 252 | 704 | 1.19e-78 | 260 |
| Msa1442090 | AT5G17420.1 | 29.114 | 553 | 321 | 11 | 1 | 495 | 446 | 985 | 2.80e-71 | 245 |
| Msa1442090 | AT4G18780.1 | 28.927 | 522 | 307 | 6 | 33 | 495 | 426 | 942 | 5.69e-69 | 238 |
| Msa1442090 | AT5G64740.1 | 27.807 | 561 | 308 | 11 | 18 | 494 | 495 | 1042 | 5.58e-66 | 231 |
| Msa1442090 | AT2G32540.1 | 30.143 | 491 | 303 | 11 | 28 | 488 | 245 | 725 | 5.22e-61 | 213 |
| Msa1442090 | AT2G32530.1 | 30.185 | 487 | 302 | 11 | 31 | 488 | 248 | 725 | 2.17e-58 | 206 |
| Msa1442090 | AT2G32620.4 | 32.026 | 459 | 264 | 12 | 28 | 453 | 149 | 592 | 4.41e-56 | 198 |
| Msa1442090 | AT2G32620.1 | 32.026 | 459 | 264 | 12 | 28 | 453 | 245 | 688 | 1.48e-55 | 198 |
| Msa1442090 | AT4G15290.1 | 29.654 | 462 | 281 | 14 | 28 | 458 | 245 | 693 | 1.61e-54 | 195 |
| Msa1442090 | AT2G32610.1 | 31.635 | 471 | 262 | 14 | 28 | 457 | 246 | 697 | 5.69e-54 | 194 |
| Msa1442090 | AT4G15320.4 | 29.677 | 465 | 278 | 13 | 28 | 458 | 260 | 709 | 4.33e-53 | 191 |
| Msa1442090 | AT4G15320.3 | 29.677 | 465 | 278 | 13 | 28 | 458 | 245 | 694 | 4.77e-53 | 191 |
| Msa1442090 | AT4G15320.5 | 29.677 | 465 | 278 | 13 | 28 | 458 | 245 | 694 | 4.82e-53 | 191 |
| Msa1442090 | AT4G38190.1 | 27.237 | 514 | 326 | 12 | 25 | 495 | 560 | 1068 | 5.20e-52 | 190 |
| Msa1442090 | AT2G32620.3 | 35.952 | 331 | 186 | 7 | 28 | 341 | 245 | 566 | 1.39e-51 | 185 |
| Msa1442090 | AT2G32620.2 | 36.741 | 313 | 168 | 9 | 28 | 323 | 245 | 544 | 2.00e-49 | 178 |
| Msa1442090 | AT3G03050.1 | 25.612 | 531 | 330 | 12 | 25 | 495 | 582 | 1107 | 3.36e-49 | 182 |
| Msa1442090 | AT1G02730.1 | 26.190 | 546 | 323 | 13 | 19 | 492 | 604 | 1141 | 1.79e-48 | 180 |
| Msa1442090 | AT5G16910.1 | 25.189 | 528 | 333 | 12 | 25 | 495 | 585 | 1107 | 1.48e-47 | 177 |
| Msa1442090 | AT1G32180.1 | 26.628 | 522 | 318 | 11 | 34 | 495 | 428 | 944 | 4.66e-47 | 176 |
| Msa1442090 | AT1G32180.2 | 26.628 | 522 | 318 | 11 | 34 | 495 | 428 | 944 | 4.66e-47 | 176 |
| Msa1442090 | AT2G33100.2 | 24.665 | 523 | 329 | 10 | 33 | 494 | 481 | 999 | 1.24e-46 | 174 |
| Msa1442090 | AT2G33100.1 | 24.665 | 523 | 329 | 10 | 33 | 494 | 481 | 999 | 1.24e-46 | 174 |
| Msa1442090 | AT4G15320.2 | 28.836 | 378 | 193 | 10 | 28 | 341 | 245 | 610 | 4.21e-40 | 154 |
| Msa1442090 | AT4G15320.1 | 28.836 | 378 | 193 | 10 | 28 | 341 | 288 | 653 | 4.73e-40 | 154 |
| Msa1442090 | AT5G09870.1 | 42.038 | 157 | 82 | 2 | 18 | 165 | 483 | 639 | 4.88e-34 | 137 |
| Msa1442090 | AT5G09870.1 | 26.140 | 329 | 220 | 7 | 176 | 494 | 712 | 1027 | 1.97e-30 | 126 |
| Msa1442090 | AT4G32410.1 | 27.439 | 328 | 220 | 7 | 176 | 495 | 722 | 1039 | 1.93e-33 | 135 |
| Msa1442090 | AT4G32410.1 | 40.411 | 146 | 79 | 1 | 20 | 157 | 496 | 641 | 2.01e-29 | 123 |
| Msa1442090 | AT2G21770.1 | 40.764 | 157 | 84 | 2 | 18 | 165 | 501 | 657 | 3.56e-33 | 134 |
| Msa1442090 | AT2G21770.1 | 26.140 | 329 | 220 | 7 | 176 | 494 | 730 | 1045 | 4.02e-32 | 131 |
| Msa1442090 | AT4G39350.1 | 42.568 | 148 | 77 | 1 | 18 | 157 | 496 | 643 | 3.97e-33 | 134 |
| Msa1442090 | AT4G39350.1 | 27.439 | 328 | 217 | 6 | 176 | 494 | 726 | 1041 | 5.41e-31 | 128 |
| Msa1442090 | AT5G05170.1 | 40.411 | 146 | 79 | 1 | 20 | 157 | 480 | 625 | 3.48e-31 | 128 |
| Msa1442090 | AT5G05170.1 | 26.667 | 330 | 220 | 9 | 176 | 495 | 707 | 1024 | 3.82e-30 | 125 |
| Msa1442090 | AT5G44030.3 | 26.769 | 325 | 227 | 7 | 176 | 495 | 411 | 729 | 2.25e-30 | 125 |
| Msa1442090 | AT5G44030.3 | 41.406 | 128 | 75 | 0 | 30 | 157 | 175 | 302 | 1.50e-29 | 123 |
| Msa1442090 | AT5G44030.1 | 26.769 | 325 | 227 | 7 | 176 | 495 | 690 | 1008 | 4.00e-30 | 125 |
| Msa1442090 | AT5G44030.1 | 40.602 | 133 | 79 | 0 | 30 | 162 | 454 | 586 | 3.00e-29 | 122 |
| Msa1442090 | AT5G44030.2 | 26.769 | 325 | 227 | 7 | 176 | 495 | 719 | 1037 | 4.18e-30 | 125 |
| Msa1442090 | AT5G44030.2 | 40.602 | 133 | 79 | 0 | 30 | 162 | 483 | 615 | 2.81e-29 | 122 |
| Msa1442090 | AT2G25540.1 | 25.305 | 328 | 227 | 7 | 176 | 495 | 702 | 1019 | 5.29e-30 | 125 |
| Msa1442090 | AT2G25540.1 | 40.411 | 146 | 79 | 1 | 20 | 157 | 476 | 621 | 1.20e-29 | 124 |
Find 106 sgRNAs with CRISPR-Local
Find 503 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCTTCTTTGGTGGTTTA+TGG | 0.102162 | tig0029741:+28181 | Msa1442090:CDS |
| ATAAATATTGCTTGCTTCTT+TGG | 0.137497 | tig0029741:+28171 | Msa1442090:CDS |
| GCAACATCTTTAGAGGTTTC+AGG | 0.218423 | tig0029741:-21210 | Msa1442090:intergenic |
| TTCTCTAAGTCGTCCTATTC+TGG | 0.230855 | tig0029741:+28269 | Msa1442090:CDS |
| GGATATAGGCCGTTGCAAAT+TGG | 0.258643 | tig0029741:-27470 | Msa1442090:intergenic |
| CCTATGAGAGAAACACAAAT+TGG | 0.275541 | tig0029741:+25667 | Msa1442090:CDS |
| CCAATTTGTGTTTCTCTCAT+AGG | 0.285482 | tig0029741:-25667 | Msa1442090:intergenic |
| AACAAAAGCAACATCTTTAG+AGG | 0.287887 | tig0029741:-21217 | Msa1442090:intergenic |
| GCAACGGCCTATATCCTATA+TGG | 0.288599 | tig0029741:+27477 | Msa1442090:CDS |
| TCACCATACAAAGATTCTTT+AGG | 0.309631 | tig0029741:-20408 | Msa1442090:intergenic |
| AGTAGAAGTGCATTACTCTT+TGG | 0.329145 | tig0029741:+21470 | Msa1442090:CDS |
| AGTTCAGATGACCACTTTAT+CGG | 0.331660 | tig0029741:-27348 | Msa1442090:intergenic |
| AAATATAGCCCATTCACTTA+TGG | 0.354851 | tig0029741:+27390 | Msa1442090:CDS |
| CAAGGCAAAATTCACTTTAT+CGG | 0.355964 | tig0029741:+28047 | Msa1442090:CDS |
| AAACTTGAGAGTACCGTTAC+TGG | 0.362985 | tig0029741:+27222 | Msa1442090:CDS |
| GATATAGGCCGTTGCAAATT+GGG | 0.364576 | tig0029741:-27469 | Msa1442090:intergenic |
| AGTGGGATTGTAAAATCAAT+TGG | 0.369244 | tig0029741:+27976 | Msa1442090:CDS |
| CTGGTGGCTCCTCGATGATT+TGG | 0.376584 | tig0029741:+27938 | Msa1442090:CDS |
| TGATTACAGCTAAGGGTGTC+AGG | 0.380411 | tig0029741:+21090 | Msa1442090:intron |
| TCCTCAGATTTGCTTCTTGA+AGG | 0.386708 | tig0029741:+27506 | Msa1442090:CDS |
| TTTGGAAGTCCAAACCAAAA+AGG | 0.388326 | tig0029741:+21488 | Msa1442090:CDS |
| TACATTGAGGTAATTTCAAC+TGG | 0.390946 | tig0029741:+27919 | Msa1442090:CDS |
| CGAGATACATAAACAACTAA+TGG | 0.399852 | tig0029741:-20918 | Msa1442090:intergenic |
| CTAAGGTTGTGAAACATTTG+AGG | 0.415344 | tig0029741:-21246 | Msa1442090:intergenic |
| CTATGAGAGAAACACAAATT+GGG | 0.429297 | tig0029741:+25668 | Msa1442090:CDS |
| CTTGATGCTCTATACAACTT+TGG | 0.431278 | tig0029741:+25531 | Msa1442090:CDS |
| AAAGGTTAAACAATGAATAG+TGG | 0.432663 | tig0029741:-27427 | Msa1442090:intergenic |
| AATATTGCTTGCTTCTTTGG+TGG | 0.448903 | tig0029741:+28174 | Msa1442090:CDS |
| CATATATGTCTTTCTTGCTA+AGG | 0.452770 | tig0029741:-21263 | Msa1442090:intergenic |
| CATTACAGGTTACAGATCCT+TGG | 0.455030 | tig0029741:+27851 | Msa1442090:intron |
| GATATAATCCCCTCCAGAAT+AGG | 0.455085 | tig0029741:-28282 | Msa1442090:intergenic |
| TCTGAGGAACGAATCCATAT+AGG | 0.464687 | tig0029741:-27491 | Msa1442090:intergenic |
| AACGAATCCATATAGGATAT+AGG | 0.472750 | tig0029741:-27484 | Msa1442090:intergenic |
| CTTGAAAGGCCATAAGTGAA+TGG | 0.474502 | tig0029741:-27399 | Msa1442090:intergenic |
| CAACCTAAAGAATCTTTGTA+TGG | 0.477060 | tig0029741:+20405 | Msa1442090:CDS |
| CCTCAGATTTGCTTCTTGAA+GGG | 0.478015 | tig0029741:+27507 | Msa1442090:CDS |
| GAGAAAGTATATAGATAATG+AGG | 0.480925 | tig0029741:-28251 | Msa1442090:intergenic |
| GGTCCAGGTCTAACCGGTAG+TGG | 0.491544 | tig0029741:+21437 | Msa1442090:CDS |
| TTGAAAGGCCATAAGTGAAT+GGG | 0.491625 | tig0029741:-27398 | Msa1442090:intergenic |
| TAAGCTAAAGAAATATGAGC+AGG | 0.493122 | tig0029741:+28089 | Msa1442090:CDS |
| TTAAGAGGTCCAGGTCTAAC+CGG | 0.494171 | tig0029741:+21431 | Msa1442090:CDS |
| GTGGGATTGTAAAATCAATT+GGG | 0.497044 | tig0029741:+27977 | Msa1442090:CDS |
| ACTTATATAATTTCCACTAC+CGG | 0.497654 | tig0029741:-21450 | Msa1442090:intergenic |
| TGTGCTTACCAAGTAACAAA+AGG | 0.502993 | tig0029741:-27445 | Msa1442090:intergenic |
| AATCCCTCTTTCATGTCAGT+TGG | 0.503641 | tig0029741:-27318 | Msa1442090:intergenic |
| TAAGGTTGTGAAACATTTGA+GGG | 0.508349 | tig0029741:-21245 | Msa1442090:intergenic |
| ACAAAGTGGAAGGGAATGGA+TGG | 0.509961 | tig0029741:+21407 | Msa1442090:CDS |
| ATCTCCATCCTCTGCAGTGG+AGG | 0.517622 | tig0029741:-27251 | Msa1442090:intergenic |
| ATGGATGGATTAAGAGGTCC+AGG | 0.518984 | tig0029741:+21422 | Msa1442090:CDS |
| ATTGTGAGTAACACAATCAC+TGG | 0.521404 | tig0029741:-28150 | Msa1442090:intergenic |
| TTTCTATTAGACAAAGTGGA+AGG | 0.522662 | tig0029741:+21397 | Msa1442090:intron |
| AATGTAATGATGAATTTGAC+TGG | 0.526323 | tig0029741:-27902 | Msa1442090:intergenic |
| ATCTCCTCCACTGCAGAGGA+TGG | 0.531864 | tig0029741:+27247 | Msa1442090:CDS |
| TGGTGACCGATAGACCTTCT+CGG | 0.533070 | tig0029741:+20425 | Msa1442090:CDS |
| GTGGCTCCTCGATGATTTGG+TGG | 0.533592 | tig0029741:+27941 | Msa1442090:CDS |
| CAATCTACGACAAGTACATA+AGG | 0.536818 | tig0029741:-21129 | Msa1442090:intergenic |
| TTCTATTAGACAAAGTGGAA+GGG | 0.538234 | tig0029741:+21398 | Msa1442090:intron |
| AAGGTTAAACAATGAATAGT+GGG | 0.542914 | tig0029741:-27426 | Msa1442090:intergenic |
| GGTGGAATGAACAAAGAAGT+GGG | 0.545717 | tig0029741:+27959 | Msa1442090:CDS |
| GTAATTTCTATTAGACAAAG+TGG | 0.553718 | tig0029741:+21393 | Msa1442090:intron |
| CTAAGTCGTCCTATTCTGGA+GGG | 0.554683 | tig0029741:+28273 | Msa1442090:CDS |
| TTAGACAAAGTGGAAGGGAA+TGG | 0.556621 | tig0029741:+21403 | Msa1442090:intron |
| TTGAATCTGTGAGGAACAGA+TGG | 0.556993 | tig0029741:-20951 | Msa1442090:intergenic |
| GAATAGTGGGCAATCTTGAA+AGG | 0.559596 | tig0029741:-27413 | Msa1442090:intergenic |
| TCAAATTCATCATTACATTG+AGG | 0.560781 | tig0029741:+27906 | Msa1442090:CDS |
| TTTCCACTACCGGTTAGACC+TGG | 0.561413 | tig0029741:-21440 | Msa1442090:intergenic |
| TGATGGTGCAGCATTGCTCA+TGG | 0.561940 | tig0029741:+28125 | Msa1442090:CDS |
| TGCTCCAACTGACATGAAAG+AGG | 0.562817 | tig0029741:+27314 | Msa1442090:CDS |
| TTTACAAGAAGCATGTGAAG+TGG | 0.562845 | tig0029741:+25635 | Msa1442090:CDS |
| TCTAAGTCGTCCTATTCTGG+AGG | 0.571094 | tig0029741:+28272 | Msa1442090:CDS |
| GGCTATCTCCTCCACTGCAG+AGG | 0.572142 | tig0029741:+27243 | Msa1442090:CDS |
| TCTGTTCCTCACAGATTCAA+AGG | 0.573369 | tig0029741:+20954 | Msa1442090:CDS |
| GATTGATTCAACCGATAAAG+TGG | 0.574825 | tig0029741:+27337 | Msa1442090:CDS |
| ACGGGTACCTCGATCCGAGA+AGG | 0.575054 | tig0029741:-20439 | Msa1442090:intergenic |
| ATTGAGGTAATTTCAACTGG+TGG | 0.581963 | tig0029741:+27922 | Msa1442090:CDS |
| TATCTATGAAGCGGAAGAGT+GGG | 0.586068 | tig0029741:+28301 | Msa1442090:CDS |
| TGGTGGAATGAACAAAGAAG+TGG | 0.587711 | tig0029741:+27958 | Msa1442090:CDS |
| CTCGATCCGAGAAGGTCTAT+CGG | 0.593655 | tig0029741:-20431 | Msa1442090:intergenic |
| AGGAGGAGCTCTCAATACAT+TGG | 0.593942 | tig0029741:+20974 | Msa1442090:CDS |
| ATTTGAACCATGAAAAGAAG+AGG | 0.595843 | tig0029741:+28332 | Msa1442090:three_prime_UTR |
| TTGATCTCCATCCTCTGCAG+TGG | 0.604218 | tig0029741:-27254 | Msa1442090:intergenic |
| TAAGTCGTCCTATTCTGGAG+GGG | 0.606867 | tig0029741:+28274 | Msa1442090:CDS |
| GTGTCAGGGCTAATCAGCAA+TGG | 0.607231 | tig0029741:+21105 | Msa1442090:CDS |
| ATATCTATGAAGCGGAAGAG+TGG | 0.607521 | tig0029741:+28300 | Msa1442090:CDS |
| GGGAATACCTCTATATCCAA+AGG | 0.609329 | tig0029741:+27527 | Msa1442090:CDS |
| CGATAGACCTTCTCGGATCG+AGG | 0.610677 | tig0029741:+20432 | Msa1442090:CDS |
| AAGGGAATGGATGGATTAAG+AGG | 0.618466 | tig0029741:+21416 | Msa1442090:CDS |
| AAAATTCACTTTATCGGACA+AGG | 0.620711 | tig0029741:+28053 | Msa1442090:CDS |
| TATGAGAGAAACACAAATTG+GGG | 0.621432 | tig0029741:+25669 | Msa1442090:CDS |
| TTTGAACCATGAAAAGAAGA+GGG | 0.624361 | tig0029741:+28333 | Msa1442090:three_prime_UTR |
| CCCTTCAAGAAGCAAATCTG+AGG | 0.636796 | tig0029741:-27507 | Msa1442090:intergenic |
| GATTACAGCTAAGGGTGTCA+GGG | 0.639742 | tig0029741:+21091 | Msa1442090:intron |
| AAGCTAAAGAAATATGAGCA+GGG | 0.640748 | tig0029741:+28090 | Msa1442090:CDS |
| GGAGCACATCCTAAGAAGCA+TGG | 0.641531 | tig0029741:-27297 | Msa1442090:intergenic |
| AAACACAAATTGGGGTAACG+AGG | 0.644444 | tig0029741:+25677 | Msa1442090:CDS |
| GCTCCAACTGACATGAAAGA+GGG | 0.649039 | tig0029741:+27315 | Msa1442090:CDS |
| ACTGTAAACACTATAAACCA+AGG | 0.655731 | tig0029741:-27868 | Msa1442090:intergenic |
| TATGGAGACTACTCAATGTG+AGG | 0.662737 | tig0029741:+28199 | Msa1442090:CDS |
| AAGCACAACCCAATTTGCAA+CGG | 0.664325 | tig0029741:+27461 | Msa1442090:CDS |
| ACATATATGATAGTCAGACT+AGG | 0.669035 | tig0029741:+21277 | Msa1442090:CDS |
| AGGGGATTATATCTATGAAG+CGG | 0.671490 | tig0029741:+28292 | Msa1442090:CDS |
| TTCATTCCACCAAATCATCG+AGG | 0.679487 | tig0029741:-27947 | Msa1442090:intergenic |
| GTGGAGGAGATAGCCAGTAA+CGG | 0.681972 | tig0029741:-27235 | Msa1442090:intergenic |
| GCTCCTCCTTTGAATCTGTG+AGG | 0.696490 | tig0029741:-20960 | Msa1442090:intergenic |
| GTTCCTCACAGATTCAAAGG+AGG | 0.708338 | tig0029741:+20957 | Msa1442090:CDS |
| GAATCACTAAAAGCATTACG+TGG | 0.753334 | tig0029741:+25573 | Msa1442090:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAACCTAATATTTATA+AGG | + | tig0029741:20595-20614 | Msa1442090:intron | 10.0% |
| !!! | TATTTTTTATTTCCATTTTA+AGG | + | tig0029741:20736-20755 | Msa1442090:intron | 10.0% |
| !! | TTTAAGCATAATATAAATAT+GGG | - | tig0029741:20798-20817 | Msa1442090:intergenic | 10.0% |
| !!! | TTTTAAGCATAATATAAATA+TGG | - | tig0029741:20799-20818 | Msa1442090:intergenic | 10.0% |
| !! | TTAATTTAAAGAAAATTAAG+AGG | - | tig0029741:21032-21051 | Msa1442090:intergenic | 10.0% |
| !!! | GTTTTTTTTTTCTATATATT+TGG | + | tig0029741:23916-23935 | Msa1442090:intron | 10.0% |
| !!! | TTTGTTATAAATATTAATAG+TGG | - | tig0029741:24995-25014 | Msa1442090:intergenic | 10.0% |
| !! | AGACAAAAAAAAAAAAATAT+TGG | - | tig0029741:25145-25164 | Msa1442090:intergenic | 10.0% |
| !! | AATTTATTATATTATACACA+GGG | - | tig0029741:25329-25348 | Msa1442090:intergenic | 10.0% |
| !! | AAATTTATTATATTATACAC+AGG | - | tig0029741:25330-25349 | Msa1442090:intergenic | 10.0% |
| !! | CATAATTATATAATTTCATT+TGG | - | tig0029741:25783-25802 | Msa1442090:intergenic | 10.0% |
| !! | TTGAATTATAGTTAAATTTA+TGG | + | tig0029741:26047-26066 | Msa1442090:intron | 10.0% |
| !!! | ATTAATTTATTTTACATTAC+AGG | + | tig0029741:27837-27856 | Msa1442090:intron | 10.0% |
| !! | TGTAGAATAATTTAGTTAAA+TGG | + | tig0029741:20493-20512 | Msa1442090:intron | 15.0% |
| !!! | ATTTTATAGACATTTTTTAG+AGG | + | tig0029741:20563-20582 | Msa1442090:intron | 15.0% |
| !! | AACATTTCCTTATAAATATT+AGG | - | tig0029741:20605-20624 | Msa1442090:intergenic | 15.0% |
| !! | TCTTCATAAAAAAGATAATA+AGG | - | tig0029741:20875-20894 | Msa1442090:intergenic | 15.0% |
| !!! | AGATAAATAGCTTAAAATTT+TGG | - | tig0029741:21323-21342 | Msa1442090:intergenic | 15.0% |
| !! | AGTGTTATAAATATTAATAG+TGG | - | tig0029741:21829-21848 | Msa1442090:intergenic | 15.0% |
| !! | ATAACCAATTAATTCTAATT+TGG | + | tig0029741:22540-22559 | Msa1442090:intron | 15.0% |
| !! | TAACCAATTAATTCTAATTT+GGG | + | tig0029741:22541-22560 | Msa1442090:intron | 15.0% |
| !! | AGTTCAAATAATTATTTGAA+AGG | - | tig0029741:24107-24126 | Msa1442090:intergenic | 15.0% |
| !! | TTAATAAAACTTATGATAGA+TGG | + | tig0029741:24227-24246 | Msa1442090:intron | 15.0% |
| !! | ATAAATCTTGAAAGAATATT+GGG | - | tig0029741:24275-24294 | Msa1442090:intergenic | 15.0% |
| !! | TTTATCCTAGTATATTATAT+TGG | + | tig0029741:24290-24309 | Msa1442090:intron | 15.0% |
| !! | AAATCAATATATCAACATAA+AGG | + | tig0029741:24436-24455 | Msa1442090:intron | 15.0% |
| !!! | TACATTATAAACTCTATTTT+GGG | - | tig0029741:24472-24491 | Msa1442090:intergenic | 15.0% |
| !!! | ATACATTATAAACTCTATTT+TGG | - | tig0029741:24473-24492 | Msa1442090:intergenic | 15.0% |
| !! | AAAATAGAGTTTATAATGTA+TGG | + | tig0029741:24472-24491 | Msa1442090:intron | 15.0% |
| !!! | TTTTGTCTTAATATTTTTCA+AGG | - | tig0029741:24809-24828 | Msa1442090:intergenic | 15.0% |
| !!! | AAAAAGTATTAGTCTTATTT+TGG | - | tig0029741:25241-25260 | Msa1442090:intergenic | 15.0% |
| !! | ATTTATTATATTATACACAG+GGG | - | tig0029741:25328-25347 | Msa1442090:intergenic | 15.0% |
| !!! | ATGTGAATCATAATTTTTTT+AGG | + | tig0029741:25854-25873 | Msa1442090:intron | 15.0% |
| !!! | TGTGAATCATAATTTTTTTA+GGG | + | tig0029741:25855-25874 | Msa1442090:intron | 15.0% |
| !! | AAAAATTTATGGCTAAATTT+AGG | + | tig0029741:26168-26187 | Msa1442090:intron | 15.0% |
| !! | AAAATTTATGGCTAAATTTA+GGG | + | tig0029741:26169-26188 | Msa1442090:intron | 15.0% |
| !! | AATCTATTGTAAATAAAACT+AGG | + | tig0029741:26340-26359 | Msa1442090:intron | 15.0% |
| !! | ATCTATTGTAAATAAAACTA+GGG | + | tig0029741:26341-26360 | Msa1442090:intron | 15.0% |
| !! | GTAATTAGTTAGTATTATTA+AGG | + | tig0029741:26676-26695 | Msa1442090:intron | 15.0% |
| !! | AATATCAGTCAAATTAATAA+CGG | - | tig0029741:27176-27195 | Msa1442090:intergenic | 15.0% |
| !! | CAGAAAAATATTGAGAAATT+CGG | + | tig0029741:20379-20398 | Msa1442090:CDS | 20.0% |
| !! | ATTATTCATTTAACTCAAAC+GGG | - | tig0029741:20460-20479 | Msa1442090:intergenic | 20.0% |
| !! | GATTATTCATTTAACTCAAA+CGG | - | tig0029741:20461-20480 | Msa1442090:intergenic | 20.0% |
| !! | CAAACAAAAACTTCTATATT+TGG | - | tig0029741:20659-20678 | Msa1442090:intergenic | 20.0% |
| !!! | CAAATATAGAAGTTTTTGTT+TGG | + | tig0029741:20657-20676 | Msa1442090:intron | 20.0% |
| !! | GAATTCTAACAAATATTCTT+AGG | + | tig0029741:21540-21559 | Msa1442090:intron | 20.0% |
| !!! | TATTCTTAGGATATTGTTTT+AGG | + | tig0029741:21553-21572 | Msa1442090:intron | 20.0% |
| !!! | ATTTTAGTAAGGTTTTAATG+AGG | - | tig0029741:21879-21898 | Msa1442090:intergenic | 20.0% |
| !!! | AATAATTGTGGTTTATCTTT+TGG | - | tig0029741:22319-22338 | Msa1442090:intergenic | 20.0% |
| !! | CAACATATACAAAATAATTG+TGG | - | tig0029741:22331-22350 | Msa1442090:intergenic | 20.0% |
| !! | CAAATCGAACATTTAAATAA+TGG | - | tig0029741:22916-22935 | Msa1442090:intergenic | 20.0% |
| !!! | TTGATGACATAAACATTATT+GGG | - | tig0029741:23029-23048 | Msa1442090:intergenic | 20.0% |
| !!! | GATCTTTTCATAAAAATACA+TGG | + | tig0029741:23081-23100 | Msa1442090:intron | 20.0% |
| !! | AATTAAATAAGTCTCTCTAT+GGG | - | tig0029741:23188-23207 | Msa1442090:intergenic | 20.0% |
| !! | AAATTAAATAAGTCTCTCTA+TGG | - | tig0029741:23189-23208 | Msa1442090:intergenic | 20.0% |
| !!! | GAGAGACTTATTTAATTTTA+TGG | + | tig0029741:23191-23210 | Msa1442090:intron | 20.0% |
| !! | CAAATAATTATTTGAACTTC+AGG | + | tig0029741:24109-24128 | Msa1442090:intron | 20.0% |
| !!! | ATTAGTTTTTCCAATATTAG+GGG | - | tig0029741:24164-24183 | Msa1442090:intergenic | 20.0% |
| !!! | GATTAGTTTTTCCAATATTA+GGG | - | tig0029741:24165-24184 | Msa1442090:intergenic | 20.0% |
| !! | GATAAATCTTGAAAGAATAT+TGG | - | tig0029741:24276-24295 | Msa1442090:intergenic | 20.0% |
| !!! | TTCTCATCTTAGTAAATTTT+TGG | - | tig0029741:24341-24360 | Msa1442090:intergenic | 20.0% |
| !! | ACTTACATATAGTAATAAGT+TGG | + | tig0029741:24405-24424 | Msa1442090:intron | 20.0% |
| !!! | TTTTTTGAATTTATAATGGC+AGG | + | tig0029741:25498-25517 | Msa1442090:intron | 20.0% |
| !!! | TTTTTGAATTTATAATGGCA+GGG | + | tig0029741:25499-25518 | Msa1442090:intron | 20.0% |
| !! | AATTTAAATTCACACCTTAT+GGG | - | tig0029741:25892-25911 | Msa1442090:intergenic | 20.0% |
| !! | AAATTTAAATTCACACCTTA+TGG | - | tig0029741:25893-25912 | Msa1442090:intergenic | 20.0% |
| !! | AGTAAAATTAAAGAGATCAA+AGG | - | tig0029741:25930-25949 | Msa1442090:intergenic | 20.0% |
| !! | TTAAATTTATGGCTAGAATT+TGG | + | tig0029741:26058-26077 | Msa1442090:intron | 20.0% |
| !! | ACACAAGGAAAAAAAATTTA+TGG | + | tig0029741:26157-26176 | Msa1442090:intron | 20.0% |
| !! | TAAAATAAATCAATAACAGC+AGG | + | tig0029741:26454-26473 | Msa1442090:intron | 20.0% |
| !! | CTATAAATTTATCACATTGA+TGG | - | tig0029741:26652-26671 | Msa1442090:intergenic | 20.0% |
| !! | CATCAATGTGATAAATTTAT+AGG | + | tig0029741:26650-26669 | Msa1442090:intron | 20.0% |
| !! | AATGTGATAAATTTATAGGT+GGG | + | tig0029741:26654-26673 | Msa1442090:intron | 20.0% |
| !! | ATAATTGTCTTCATCAAATA+AGG | + | tig0029741:26726-26745 | Msa1442090:intron | 20.0% |
| !! | TAATTGTCTTCATCAAATAA+GGG | + | tig0029741:26727-26746 | Msa1442090:intron | 20.0% |
| !! | ATATCAGTCAAATTAATAAC+GGG | - | tig0029741:27175-27194 | Msa1442090:intergenic | 20.0% |
| !!! | ATTTATCCATATTTTACCTT+TGG | - | tig0029741:27546-27565 | Msa1442090:intergenic | 20.0% |
| !!! | AAAAACTTATGAACACATTT+TGG | + | tig0029741:27611-27630 | Msa1442090:intron | 20.0% |
| !! | AATTAATAGAAGTAACATGT+TGG | - | tig0029741:27824-27843 | Msa1442090:intergenic | 20.0% |
| !! | AAACAACGAAAAAAAAGTTT+GGG | + | tig0029741:28019-28038 | Msa1442090:CDS | 20.0% |
| !!! | AGTTTCAATTGTTTTTAAAG+TGG | + | tig0029741:28445-28464 | Msa1442090:three_prime_UTR | 20.0% |
| ! | ACAAGTTAAGAACCTTAAAA+TGG | - | tig0029741:20751-20770 | Msa1442090:intergenic | 25.0% |
| ! | GTAATTTCTATTAGACAAAG+TGG | + | tig0029741:21393-21412 | Msa1442090:intron | 25.0% |
| ! | ACTTATATAATTTCCACTAC+CGG | - | tig0029741:21453-21472 | Msa1442090:intergenic | 25.0% |
| !!! | TAATTTGTACCTTTTTGGTT+TGG | - | tig0029741:21500-21519 | Msa1442090:intergenic | 25.0% |
| !!! | TGTAGTAATTTGTACCTTTT+TGG | - | tig0029741:21505-21524 | Msa1442090:intergenic | 25.0% |
| ! | TTACAATGAGCTCTATTTAT+AGG | + | tig0029741:21729-21748 | Msa1442090:intron | 25.0% |
| ! | TACAATGAGCTCTATTTATA+GGG | + | tig0029741:21730-21749 | Msa1442090:intron | 25.0% |
| ! | CAAATAGCAAATTGGTTAAT+GGG | - | tig0029741:21801-21820 | Msa1442090:intergenic | 25.0% |
| ! | TTACTAAAATAAAACCCAGT+GGG | + | tig0029741:21889-21908 | Msa1442090:intron | 25.0% |
| !!! | ACTATAATTTTTTTCCCACT+GGG | - | tig0029741:21906-21925 | Msa1442090:intergenic | 25.0% |
| ! | TGGGAAAAAAATTATAGTGA+AGG | + | tig0029741:21908-21927 | Msa1442090:intron | 25.0% |
| ! | GAGAAACTTGTATTATGAAT+TGG | - | tig0029741:22088-22107 | Msa1442090:intergenic | 25.0% |
| ! | AGTTTCTCAAAAACTTTACT+TGG | + | tig0029741:22100-22119 | Msa1442090:intron | 25.0% |
| ! | GTTTCTCAAAAACTTTACTT+GGG | + | tig0029741:22101-22120 | Msa1442090:intron | 25.0% |
| ! | TTGAAAGAAGGATACATTAA+AGG | - | tig0029741:22244-22263 | Msa1442090:intergenic | 25.0% |
| !!! | ATTTGATGATGTTGTTGTTA+TGG | + | tig0029741:22414-22433 | Msa1442090:intron | 25.0% |
| ! | ACAAATTACTTGTTTAGAAG+TGG | - | tig0029741:22475-22494 | Msa1442090:intergenic | 25.0% |
| ! | GTACCCAAATTAGAATTAAT+TGG | - | tig0029741:22547-22566 | Msa1442090:intergenic | 25.0% |
| !! | AAGAACTGTATCTTGATAAT+AGG | + | tig0029741:22653-22672 | Msa1442090:intron | 25.0% |
| ! | TTGACAGAAAATGATATATC+TGG | + | tig0029741:22676-22695 | Msa1442090:intron | 25.0% |
| !!! | GTTGATGACATAAACATTAT+TGG | - | tig0029741:23030-23049 | Msa1442090:intergenic | 25.0% |
| !! | AAATATGATGAATGATAACG+AGG | - | tig0029741:23673-23692 | Msa1442090:intergenic | 25.0% |
| !!! | TACTGAGATCTCTTTATTTT+TGG | + | tig0029741:23770-23789 | Msa1442090:intron | 25.0% |
| !!! | ACTGAGATCTCTTTATTTTT+GGG | + | tig0029741:23771-23790 | Msa1442090:intron | 25.0% |
| !!! | TCTTTATTTTTGGGAATTTC+AGG | + | tig0029741:23780-23799 | Msa1442090:intron | 25.0% |
| ! | AAAAAACCTCGAATAAGAAA+AGG | - | tig0029741:23903-23922 | Msa1442090:intergenic | 25.0% |
| ! | CAATATTAGAATATCCTACA+GGG | + | tig0029741:23984-24003 | Msa1442090:intron | 25.0% |
| !!! | TTAGTTTTTCCAATATTAGG+GGG | - | tig0029741:24163-24182 | Msa1442090:intergenic | 25.0% |
| !!! | GGATTAGTTTTTCCAATATT+AGG | - | tig0029741:24166-24185 | Msa1442090:intergenic | 25.0% |
| ! | TTGCTCCAATATAATATACT+AGG | - | tig0029741:24298-24317 | Msa1442090:intergenic | 25.0% |
| !!! | TCTAATTCATCATTGGTTTT+AGG | - | tig0029741:24379-24398 | Msa1442090:intergenic | 25.0% |
| ! | TAAAACCAATGATGAATTAG+AGG | + | tig0029741:24378-24397 | Msa1442090:intron | 25.0% |
| ! | AAAACCAATGATGAATTAGA+GGG | + | tig0029741:24379-24398 | Msa1442090:intron | 25.0% |
| ! | AAAATAATCTCACAAACTTC+TGG | + | tig0029741:24672-24691 | Msa1442090:intron | 25.0% |
| ! | AATTTGAGTCTCTCAATAAT+TGG | - | tig0029741:24770-24789 | Msa1442090:intergenic | 25.0% |
| ! | TTACAATGAGCTCTATTTAT+AGG | + | tig0029741:21729-21748 | Msa1442090:intron | 25.0% |
| ! | TACAATGAGCTCTATTTATA+GGG | + | tig0029741:21730-21749 | Msa1442090:intron | 25.0% |
| ! | CAAATAGCAAATTGGTTAAT+GGG | - | tig0029741:21801-21820 | Msa1442090:intergenic | 25.0% |
| ! | AATGAATGTCTTAAGATCAT+TGG | - | tig0029741:25047-25066 | Msa1442090:intergenic | 25.0% |
| !!! | TATTAGTCTTATTTTGGTTG+TGG | - | tig0029741:25235-25254 | Msa1442090:intergenic | 25.0% |
| !!! | AAGACTAATACTTTTTTGTC+CGG | + | tig0029741:25245-25264 | Msa1442090:intron | 25.0% |
| !! | TTTTGAATTTATAATGGCAG+GGG | + | tig0029741:25500-25519 | Msa1442090:intron | 25.0% |
| !!! | TGACTAGAGATTTTTTTTGA+AGG | + | tig0029741:26108-26127 | Msa1442090:intron | 25.0% |
| ! | TTGTAAATAAAACTAGGGTT+AGG | + | tig0029741:26346-26365 | Msa1442090:intron | 25.0% |
| ! | CTTCTACCAAAAATGATTAT+GGG | - | tig0029741:26376-26395 | Msa1442090:intergenic | 25.0% |
| ! | TCTTCTACCAAAAATGATTA+TGG | - | tig0029741:26377-26396 | Msa1442090:intergenic | 25.0% |
| !! | TGGAATTGGGTTTAAATTTT+TGG | - | tig0029741:26494-26513 | Msa1442090:intergenic | 25.0% |
| ! | CAATGTGATAAATTTATAGG+TGG | + | tig0029741:26653-26672 | Msa1442090:intron | 25.0% |
| ! | ACGTGAAAACTAAAATGAAA+CGG | + | tig0029741:26821-26840 | Msa1442090:intron | 25.0% |
| ! | TTAAGCTCAAAATTATGCAT+TGG | + | tig0029741:27035-27054 | Msa1442090:intron | 25.0% |
| ! | AATGAAAGTTTAATGTGAGT+TGG | - | tig0029741:27125-27144 | Msa1442090:intergenic | 25.0% |
| !! | TTAATTTGACTGATATTCAC+AGG | + | tig0029741:27179-27198 | Msa1442090:intron | 25.0% |
| ! | AAGGTTAAACAATGAATAGT+GGG | - | tig0029741:27429-27448 | Msa1442090:intergenic | 25.0% |
| ! | AAAGGTTAAACAATGAATAG+TGG | - | tig0029741:27430-27449 | Msa1442090:intergenic | 25.0% |
| !! | TTGTTTAACCTTTTGTTACT+TGG | + | tig0029741:27437-27456 | Msa1442090:CDS | 25.0% |
| !! | TATTTTACCTTTGGATATAG+AGG | - | tig0029741:27537-27556 | Msa1442090:intergenic | 25.0% |
| ! | CTATATCCAAAGGTAAAATA+TGG | + | tig0029741:27537-27556 | Msa1442090:intron | 25.0% |
| ! | ATAAGTCAATTCTAACAAGA+TGG | + | tig0029741:27766-27785 | Msa1442090:intron | 25.0% |
| ! | AATGTAATGATGAATTTGAC+TGG | - | tig0029741:27905-27924 | Msa1442090:intergenic | 25.0% |
| ! | TCAAATTCATCATTACATTG+AGG | + | tig0029741:27906-27925 | Msa1442090:CDS | 25.0% |
| ! | GAAACAACGAAAAAAAAGTT+TGG | + | tig0029741:28018-28037 | Msa1442090:CDS | 25.0% |
| ! | ATAAATATTGCTTGCTTCTT+TGG | + | tig0029741:28171-28190 | Msa1442090:CDS | 25.0% |
| !!! | AGGAATTTTGATGAAATGTT+TGG | + | tig0029741:28219-28238 | Msa1442090:CDS | 25.0% |
| !! | GAGAAAGTATATAGATAATG+AGG | - | tig0029741:28254-28273 | Msa1442090:intergenic | 25.0% |
| CAACCTAAAGAATCTTTGTA+TGG | + | tig0029741:20405-20424 | Msa1442090:CDS | 30.0% | |
| TCACCATACAAAGATTCTTT+AGG | - | tig0029741:20411-20430 | Msa1442090:intergenic | 30.0% | |
| TTTCTTAACTTATGCCTCAA+GGG | - | tig0029741:20636-20655 | Msa1442090:intergenic | 30.0% | |
| !! | TCATATTAACTTGTGCCTAA+GGG | - | tig0029741:20775-20794 | Msa1442090:intergenic | 30.0% |
| ! | CAACTAATGGCATTTCTTTT+TGG | - | tig0029741:20908-20927 | Msa1442090:intergenic | 30.0% |
| CGAGATACATAAACAACTAA+TGG | - | tig0029741:20921-20940 | Msa1442090:intergenic | 30.0% | |
| ATCAAATGTGATTACAGCTA+AGG | + | tig0029741:21082-21101 | Msa1442090:intron | 30.0% | |
| TCAAATGTGATTACAGCTAA+GGG | + | tig0029741:21083-21102 | Msa1442090:intron | 30.0% | |
| ! | AAAAAAGCACATGGATTGTT+TGG | - | tig0029741:21184-21203 | Msa1442090:intergenic | 30.0% |
| AACAAAAGCAACATCTTTAG+AGG | - | tig0029741:21220-21239 | Msa1442090:intergenic | 30.0% | |
| TAAGGTTGTGAAACATTTGA+GGG | - | tig0029741:21248-21267 | Msa1442090:intergenic | 30.0% | |
| CATATATGTCTTTCTTGCTA+AGG | - | tig0029741:21266-21285 | Msa1442090:intergenic | 30.0% | |
| ACATATATGATAGTCAGACT+AGG | + | tig0029741:21277-21296 | Msa1442090:CDS | 30.0% | |
| TTTCTATTAGACAAAGTGGA+AGG | + | tig0029741:21397-21416 | Msa1442090:intron | 30.0% | |
| TTCTATTAGACAAAGTGGAA+GGG | + | tig0029741:21398-21417 | Msa1442090:intron | 30.0% | |
| TTAGAATTCTCGAAACTGTA+AGG | - | tig0029741:21529-21548 | Msa1442090:intergenic | 30.0% | |
| CCAAATAGCAAATTGGTTAA+TGG | - | tig0029741:21802-21821 | Msa1442090:intergenic | 30.0% | |
| !! | CCATTAACCAATTTGCTATT+TGG | + | tig0029741:21799-21818 | Msa1442090:intron | 30.0% |
| !!! | CACTGGGTTTTATTTTAGTA+AGG | - | tig0029741:21890-21909 | Msa1442090:intergenic | 30.0% |
| CTTACTAAAATAAAACCCAG+TGG | + | tig0029741:21888-21907 | Msa1442090:intron | 30.0% | |
| !!! | CACTATAATTTTTTTCCCAC+TGG | - | tig0029741:21907-21926 | Msa1442090:intergenic | 30.0% |
| AGAGATATTTGTCTTCATGA+GGG | - | tig0029741:22052-22071 | Msa1442090:intergenic | 30.0% | |
| AAGAGATATTTGTCTTCATG+AGG | - | tig0029741:22053-22072 | Msa1442090:intergenic | 30.0% | |
| GAAGACAAATATCTCTTAGA+TGG | + | tig0029741:22056-22075 | Msa1442090:intron | 30.0% | |
| !! | TGGGAGAAATATGTTTTGTT+CGG | + | tig0029741:22215-22234 | Msa1442090:intron | 30.0% |
| !! | TGGTTTATCTTTTGGAAGAA+TGG | - | tig0029741:22311-22330 | Msa1442090:intergenic | 30.0% |
| GTAGAGAATGTGTTTGATTA+AGG | - | tig0029741:22363-22382 | Msa1442090:intergenic | 30.0% | |
| ! | AGAACTTTTAGCATTTCATG+AGG | - | tig0029741:22389-22408 | Msa1442090:intergenic | 30.0% |
| GTACCATATCTTAGTACAAT+AGG | - | tig0029741:22733-22752 | Msa1442090:intergenic | 30.0% | |
| AGTGTTAAAACGTTTCTACA+TGG | - | tig0029741:22860-22879 | Msa1442090:intergenic | 30.0% | |
| GAATTCGAAATGAAAGACTT+GGG | - | tig0029741:22964-22983 | Msa1442090:intergenic | 30.0% | |
| AGAATTCGAAATGAAAGACT+TGG | - | tig0029741:22965-22984 | Msa1442090:intergenic | 30.0% | |
| TCATTTCGAATTCTTTCTTC+AGG | + | tig0029741:22971-22990 | Msa1442090:intron | 30.0% | |
| ! | AGTGAATATTTGCTAAAGGA+GGG | - | tig0029741:23129-23148 | Msa1442090:intergenic | 30.0% |
| !! | TTAGTCTTATAGCTCATGAA+GGG | - | tig0029741:23347-23366 | Msa1442090:intergenic | 30.0% |
| !! | ATTAGTCTTATAGCTCATGA+AGG | - | tig0029741:23348-23367 | Msa1442090:intergenic | 30.0% |
| ! | TCAATTGCATCTTTCCATTT+TGG | + | tig0029741:23600-23619 | Msa1442090:intron | 30.0% |
| CTACAATCTTTAATAGACCT+AGG | + | tig0029741:23639-23658 | Msa1442090:intron | 30.0% | |
| ATGTCACTATTGAAATCCAA+TGG | - | tig0029741:23746-23765 | Msa1442090:intergenic | 30.0% | |
| GAATAAGAAAAGGAGCTTAA+AGG | - | tig0029741:23893-23912 | Msa1442090:intergenic | 30.0% | |
| ! | TCTATATATTTGGAACCGAT+TGG | + | tig0029741:23926-23945 | Msa1442090:intron | 30.0% |
| GCAATATTAGAATATCCTAC+AGG | + | tig0029741:23983-24002 | Msa1442090:intron | 30.0% | |
| TGCAAATGAGTTATATCTTG+AGG | + | tig0029741:24058-24077 | Msa1442090:intron | 30.0% | |
| AACTTTAGACGTCTAAAGAA+TGG | + | tig0029741:24520-24539 | Msa1442090:intron | 30.0% | |
| GCATATGCTCATGAAAAAAA+TGG | - | tig0029741:24556-24575 | Msa1442090:intergenic | 30.0% | |
| TTTGTGAATCGATATATCGA+AGG | - | tig0029741:24742-24761 | Msa1442090:intergenic | 30.0% | |
| TTAAGACAAAAGTAGAGAGA+AGG | + | tig0029741:24818-24837 | Msa1442090:intron | 30.0% | |
| CCAAATAGCAAATTGGTTAA+TGG | - | tig0029741:21802-21821 | Msa1442090:intergenic | 30.0% | |
| !! | CCATTAACCAATTTGCTATT+TGG | + | tig0029741:21799-21818 | Msa1442090:intron | 30.0% |
| GACAATGCATAATATATGCA+AGG | + | tig0029741:25190-25209 | Msa1442090:intron | 30.0% | |
| !!! | AGACTAATACTTTTTTGTCC+GGG | + | tig0029741:25246-25265 | Msa1442090:intron | 30.0% |
| TAGAGATTCTATTTCAAACC+CGG | - | tig0029741:25267-25286 | Msa1442090:intergenic | 30.0% | |
| ATTTATGTTACCTTCACCAA+TGG | + | tig0029741:25392-25411 | Msa1442090:intron | 30.0% | |
| ! | ATTGATTTCACCATATCCAT+TGG | - | tig0029741:25411-25430 | Msa1442090:intergenic | 30.0% |
| CTATGAGAGAAACACAAATT+GGG | + | tig0029741:25668-25687 | Msa1442090:CDS | 30.0% | |
| TATGAGAGAAACACAAATTG+GGG | + | tig0029741:25669-25688 | Msa1442090:CDS | 30.0% | |
| CAATCCATTGAAAATTGAAC+GGG | - | tig0029741:26243-26262 | Msa1442090:intergenic | 30.0% | |
| CCAATCCATTGAAAATTGAA+CGG | - | tig0029741:26244-26263 | Msa1442090:intergenic | 30.0% | |
| !! | CGTTCAATTTTCAATGGATT+GGG | + | tig0029741:26242-26261 | Msa1442090:intron | 30.0% |
| TAAATAAAACTAGGGTTAGG+TGG | + | tig0029741:26349-26368 | Msa1442090:intron | 30.0% | |
| AAATAAAACTAGGGTTAGGT+GGG | + | tig0029741:26350-26369 | Msa1442090:intron | 30.0% | |
| ! | TTTTGGTAGAAGATCATCAT+AGG | + | tig0029741:26384-26403 | Msa1442090:intron | 30.0% |
| ATAAATCAATAACAGCAGGT+CGG | + | tig0029741:26458-26477 | Msa1442090:intron | 30.0% | |
| TGATGGTAAAATTTAGCTAG+CGG | - | tig0029741:26635-26654 | Msa1442090:intergenic | 30.0% | |
| TGAAGACAATTATAACGAGA+CGG | - | tig0029741:26719-26738 | Msa1442090:intergenic | 30.0% | |
| TTCAAATGAGTCATCTATTG+CGG | - | tig0029741:26869-26888 | Msa1442090:intergenic | 30.0% | |
| TTGTGTCAAGTATTATGAGA+TGG | + | tig0029741:27076-27095 | Msa1442090:intron | 30.0% | |
| !! | GTTTAATGTGAGTTGGATTT+TGG | - | tig0029741:27118-27137 | Msa1442090:intergenic | 30.0% |
| AAATATAGCCCATTCACTTA+TGG | + | tig0029741:27390-27409 | Msa1442090:CDS | 30.0% | |
| AACGAATCCATATAGGATAT+AGG | - | tig0029741:27487-27506 | Msa1442090:intergenic | 30.0% | |
| !! | ACTTATGAACACATTTTGGT+TGG | + | tig0029741:27615-27634 | Msa1442090:intron | 30.0% |
| !! | TTTGAAATGTGCTCGTTTTA+AGG | + | tig0029741:27660-27679 | Msa1442090:intron | 30.0% |
| GTCTCAGAATGTGTTATAAT+AGG | + | tig0029741:27682-27701 | Msa1442090:intron | 30.0% | |
| ACTGTAAACACTATAAACCA+AGG | - | tig0029741:27871-27890 | Msa1442090:intergenic | 30.0% | |
| TACATTGAGGTAATTTCAAC+TGG | + | tig0029741:27919-27938 | Msa1442090:CDS | 30.0% | |
| AGTGGGATTGTAAAATCAAT+TGG | + | tig0029741:27976-27995 | Msa1442090:CDS | 30.0% | |
| GTGGGATTGTAAAATCAATT+GGG | + | tig0029741:27977-27996 | Msa1442090:CDS | 30.0% | |
| !! | AAAAAAGTTTGGGTTGAACA+AGG | + | tig0029741:28029-28048 | Msa1442090:CDS | 30.0% |
| CAAGGCAAAATTCACTTTAT+CGG | + | tig0029741:28047-28066 | Msa1442090:CDS | 30.0% | |
| AAAATTCACTTTATCGGACA+AGG | + | tig0029741:28053-28072 | Msa1442090:CDS | 30.0% | |
| TAAGCTAAAGAAATATGAGC+AGG | + | tig0029741:28089-28108 | Msa1442090:CDS | 30.0% | |
| AAGCTAAAGAAATATGAGCA+GGG | + | tig0029741:28090-28109 | Msa1442090:CDS | 30.0% | |
| !! | CAGGGTAAGTTTAATTTTGA+TGG | + | tig0029741:28108-28127 | Msa1442090:CDS | 30.0% |
| ATTTGAACCATGAAAAGAAG+AGG | + | tig0029741:28332-28351 | Msa1442090:three_prime_UTR | 30.0% | |
| TTTGAACCATGAAAAGAAGA+GGG | + | tig0029741:28333-28352 | Msa1442090:three_prime_UTR | 30.0% | |
| GTTTCTTAACTTATGCCTCA+AGG | - | tig0029741:20637-20656 | Msa1442090:intergenic | 35.0% | |
| !! | GTCATATTAACTTGTGCCTA+AGG | - | tig0029741:20776-20795 | Msa1442090:intergenic | 35.0% |
| CAATCTACGACAAGTACATA+AGG | - | tig0029741:21132-21151 | Msa1442090:intergenic | 35.0% | |
| ! | AGGATCAAGAAAAAAGCACA+TGG | - | tig0029741:21193-21212 | Msa1442090:intergenic | 35.0% |
| CTAAGGTTGTGAAACATTTG+AGG | - | tig0029741:21249-21268 | Msa1442090:intergenic | 35.0% | |
| ! | AGTAGAAGTGCATTACTCTT+TGG | + | tig0029741:21470-21489 | Msa1442090:CDS | 35.0% |
| TTTGGAAGTCCAAACCAAAA+AGG | + | tig0029741:21488-21507 | Msa1442090:CDS | 35.0% | |
| AAGGAGAAGAAGAGAGAATA+AGG | + | tig0029741:21671-21690 | Msa1442090:intron | 35.0% | |
| TGGATGTCCAAATAGCAAAT+TGG | - | tig0029741:21809-21828 | Msa1442090:intergenic | 35.0% | |
| ATATTTATAACACTCCCCCT+TGG | + | tig0029741:21835-21854 | Msa1442090:intron | 35.0% | |
| TTAATGAGGCATATCCTCAA+TGG | - | tig0029741:21865-21884 | Msa1442090:intergenic | 35.0% | |
| AGATATTTGTCTTCATGAGG+GGG | - | tig0029741:22050-22069 | Msa1442090:intergenic | 35.0% | |
| GAGATATTTGTCTTCATGAG+GGG | - | tig0029741:22051-22070 | Msa1442090:intergenic | 35.0% | |
| ATCACGGGTGAAAAAGAATT+TGG | + | tig0029741:22195-22214 | Msa1442090:intron | 35.0% | |
| TCACGGGTGAAAAAGAATTT+GGG | + | tig0029741:22196-22215 | Msa1442090:intron | 35.0% | |
| TGTATTGCTCAGTTGAAAGA+AGG | - | tig0029741:22256-22275 | Msa1442090:intergenic | 35.0% | |
| TGAAATGCTAAAAGTTCTGC+AGG | + | tig0029741:22391-22410 | Msa1442090:intron | 35.0% | |
| CTTTACAGATCTCCATGAAA+TGG | + | tig0029741:22441-22460 | Msa1442090:intron | 35.0% | |
| GTTTATGATCTACCATGATG+AGG | + | tig0029741:22493-22512 | Msa1442090:intron | 35.0% | |
| TATTTGTCAGATCCTCATCA+TGG | - | tig0029741:22508-22527 | Msa1442090:intergenic | 35.0% | |
| ! | CATGTATTTTGTTACCTTCG+AGG | - | tig0029741:22601-22620 | Msa1442090:intergenic | 35.0% |
| TACACAAAGACATTGGAATG+GGG | - | tig0029741:22629-22648 | Msa1442090:intergenic | 35.0% | |
| CTACACAAAGACATTGGAAT+GGG | - | tig0029741:22630-22649 | Msa1442090:intergenic | 35.0% | |
| GCTCCTATTGTACTAAGATA+TGG | + | tig0029741:22727-22746 | Msa1442090:intron | 35.0% | |
| GTACTAAGATATGGTACTTC+AGG | + | tig0029741:22736-22755 | Msa1442090:intron | 35.0% | |
| TCTAGTGATCTAACAACCAT+TGG | + | tig0029741:22811-22830 | Msa1442090:intron | 35.0% | |
| !! | GGAAAGACAAAGTTTTGTCT+CGG | - | tig0029741:22943-22962 | Msa1442090:intergenic | 35.0% |
| TTCTTTCTTCAGGCAATCTA+TGG | + | tig0029741:22981-23000 | Msa1442090:intron | 35.0% | |
| ! | CAGTGAATATTTGCTAAAGG+AGG | - | tig0029741:23130-23149 | Msa1442090:intergenic | 35.0% |
| ! | CCTCAGTGAATATTTGCTAA+AGG | - | tig0029741:23133-23152 | Msa1442090:intergenic | 35.0% |
| CCTTTAGCAAATATTCACTG+AGG | + | tig0029741:23130-23149 | Msa1442090:intron | 35.0% | |
| TGCAAATAGTTCAGGATCTA+GGG | - | tig0029741:23226-23245 | Msa1442090:intergenic | 35.0% | |
| ATGCAAATAGTTCAGGATCT+AGG | - | tig0029741:23227-23246 | Msa1442090:intergenic | 35.0% | |
| GAAACCAGTTGGGTATAAAT+GGG | - | tig0029741:23514-23533 | Msa1442090:intergenic | 35.0% | |
| TGAAACCAGTTGGGTATAAA+TGG | - | tig0029741:23515-23534 | Msa1442090:intergenic | 35.0% | |
| CTCAACAAGAGAAAAGTCTT+TGG | - | tig0029741:23564-23583 | Msa1442090:intergenic | 35.0% | |
| ATTGTAGACAAAGCGAGAAT+TGG | - | tig0029741:23626-23645 | Msa1442090:intergenic | 35.0% | |
| AGAGTTTCTATATCCTCGTT+TGG | + | tig0029741:23858-23877 | Msa1442090:intron | 35.0% | |
| GAGTTTCTATATCCTCGTTT+GGG | + | tig0029741:23859-23878 | Msa1442090:intron | 35.0% | |
| ! | TAAGCTCCTTTTCTTATTCG+AGG | + | tig0029741:23894-23913 | Msa1442090:intron | 35.0% |
| AACGAAATAGATATCCCTGT+AGG | - | tig0029741:24001-24020 | Msa1442090:intergenic | 35.0% | |
| ACAGGGATATCTATTTCGTT+TGG | + | tig0029741:24001-24020 | Msa1442090:intron | 35.0% | |
| TTATCATCTCCCCCTAATAT+TGG | + | tig0029741:24151-24170 | Msa1442090:intron | 35.0% | |
| !! | GTAGGTTGATTATCGATTGA+TGG | - | tig0029741:24187-24206 | Msa1442090:intergenic | 35.0% |
| TCAATCGATAATCAACCTAC+TGG | + | tig0029741:24187-24206 | Msa1442090:intron | 35.0% | |
| CAATCGATAATCAACCTACT+GGG | + | tig0029741:24188-24207 | Msa1442090:intron | 35.0% | |
| AAGGAGAAGAAGAGAGAATA+AGG | + | tig0029741:21671-21690 | Msa1442090:intron | 35.0% | |
| TGGATGTCCAAATAGCAAAT+TGG | - | tig0029741:21809-21828 | Msa1442090:intergenic | 35.0% | |
| ! | TAAGCTTATCTCAGTTGGTA+GGG | + | tig0029741:25168-25187 | Msa1442090:intron | 35.0% |
| CATAATATATGCAAGGTTCG+AGG | + | tig0029741:25197-25216 | Msa1442090:intron | 35.0% | |
| GGTAAGTAACACAATTGGTT+TGG | - | tig0029741:25307-25326 | Msa1442090:intergenic | 35.0% | |
| CTTGATGCTCTATACAACTT+TGG | + | tig0029741:25531-25550 | Msa1442090:CDS | 35.0% | |
| !! | GAATCACTAAAAGCATTACG+TGG | + | tig0029741:25573-25592 | Msa1442090:CDS | 35.0% |
| ! | TTTACAAGAAGCATGTGAAG+TGG | + | tig0029741:25635-25654 | Msa1442090:CDS | 35.0% |
| CCAATTTGTGTTTCTCTCAT+AGG | - | tig0029741:25670-25689 | Msa1442090:intergenic | 35.0% | |
| CCTATGAGAGAAACACAAAT+TGG | + | tig0029741:25667-25686 | Msa1442090:CDS | 35.0% | |
| ! | GCTAAATTTAGGGCTATACA+CGG | + | tig0029741:26179-26198 | Msa1442090:intron | 35.0% |
| ! | CTAAATTTAGGGCTATACAC+GGG | + | tig0029741:26180-26199 | Msa1442090:intron | 35.0% |
| ! | CATTGAAAATTGAACGGGTT+GGG | - | tig0029741:26238-26257 | Msa1442090:intergenic | 35.0% |
| ! | CCGTTCAATTTTCAATGGAT+TGG | + | tig0029741:26241-26260 | Msa1442090:intron | 35.0% |
| !! | GGTTTAAATTTTTGGACCCA+TGG | - | tig0029741:26486-26505 | Msa1442090:intergenic | 35.0% |
| !! | CAAAGTTTGGTTCTGGAATT+GGG | - | tig0029741:26507-26526 | Msa1442090:intergenic | 35.0% |
| CTTGGGTTCAGATAATTAGT+GGG | + | tig0029741:26556-26575 | Msa1442090:intron | 35.0% | |
| !! | GTTCAGATAATTAGTGGGTT+GGG | + | tig0029741:26561-26580 | Msa1442090:intron | 35.0% |
| GAAGACAATTATAACGAGAC+GGG | - | tig0029741:26718-26737 | Msa1442090:intergenic | 35.0% | |
| TCAAATGAGTCATCTATTGC+GGG | - | tig0029741:26868-26887 | Msa1442090:intergenic | 35.0% | |
| TGTCAAGTATTATGAGATGG+TGG | + | tig0029741:27079-27098 | Msa1442090:intron | 35.0% | |
| TTTGACTGATATTCACAGGT+TGG | + | tig0029741:27183-27202 | Msa1442090:intron | 35.0% | |
| !! | CTAAGAAGCATGGTCTTTTT+GGG | - | tig0029741:27290-27309 | Msa1442090:intergenic | 35.0% |
| ! | GATTGATTCAACCGATAAAG+TGG | + | tig0029741:27337-27356 | Msa1442090:CDS | 35.0% |
| AGTTCAGATGACCACTTTAT+CGG | - | tig0029741:27351-27370 | Msa1442090:intergenic | 35.0% | |
| TTGAAAGGCCATAAGTGAAT+GGG | - | tig0029741:27401-27420 | Msa1442090:intergenic | 35.0% | |
| TGTGCTTACCAAGTAACAAA+AGG | - | tig0029741:27448-27467 | Msa1442090:intergenic | 35.0% | |
| !!! | TGAACACATTTTGGTTGGTT+TGG | + | tig0029741:27620-27639 | Msa1442090:intron | 35.0% |
| ATTGAGGTAATTTCAACTGG+TGG | + | tig0029741:27922-27941 | Msa1442090:CDS | 35.0% | |
| ATTGTGAGTAACACAATCAC+TGG | - | tig0029741:28153-28172 | Msa1442090:intergenic | 35.0% | |
| AATATTGCTTGCTTCTTTGG+TGG | + | tig0029741:28174-28193 | Msa1442090:CDS | 35.0% | |
| AGGGGATTATATCTATGAAG+CGG | + | tig0029741:28292-28311 | Msa1442090:CDS | 35.0% | |
| ! | ACATATCCCTCTTCTTTTCA+TGG | - | tig0029741:28342-28361 | Msa1442090:intergenic | 35.0% |
| !! | AATGTTAACTTGTGCCCTTG+AGG | + | tig0029741:20619-20638 | Msa1442090:intron | 40.0% |
| TTGAATCTGTGAGGAACAGA+TGG | - | tig0029741:20954-20973 | Msa1442090:intergenic | 40.0% | |
| TCTGTTCCTCACAGATTCAA+AGG | + | tig0029741:20954-20973 | Msa1442090:CDS | 40.0% | |
| ! | GCAACATCTTTAGAGGTTTC+AGG | - | tig0029741:21213-21232 | Msa1442090:intergenic | 40.0% |
| !! | TCAGACTAGGACTGCTTTTA+CGG | + | tig0029741:21290-21309 | Msa1442090:CDS | 40.0% |
| TTAGACAAAGTGGAAGGGAA+TGG | + | tig0029741:21403-21422 | Msa1442090:intron | 40.0% | |
| !! | AAGGGAATGGATGGATTAAG+AGG | + | tig0029741:21416-21435 | Msa1442090:CDS | 40.0% |
| TAGAGACAGAAGTAGAGAGA+AGG | + | tig0029741:21652-21671 | Msa1442090:intron | 40.0% | |
| AACTAAGCCCAATAACCTAG+TGG | + | tig0029741:21770-21789 | Msa1442090:intron | 40.0% | |
| GGTCATTCCACTAGGTTATT+GGG | - | tig0029741:21780-21799 | Msa1442090:intergenic | 40.0% | |
| TATCCTCAATGGACATCCAA+GGG | - | tig0029741:21854-21873 | Msa1442090:intergenic | 40.0% | |
| ATATCCTCAATGGACATCCA+AGG | - | tig0029741:21855-21874 | Msa1442090:intergenic | 40.0% | |
| ! | TCCTGGTAAGGTTTTTAACG+AGG | - | tig0029741:21968-21987 | Msa1442090:intergenic | 40.0% |
| !!! | CACTCTTTTTTCCTTCACCA+AGG | - | tig0029741:22009-22028 | Msa1442090:intergenic | 40.0% |
| ! | CACCATTCTTCTGAAGATCA+CGG | + | tig0029741:22179-22198 | Msa1442090:intron | 40.0% |
| ! | ACCATTCTTCTGAAGATCAC+GGG | + | tig0029741:22180-22199 | Msa1442090:intron | 40.0% |
| GTGGAGATACAACCATTTCA+TGG | - | tig0029741:22456-22475 | Msa1442090:intergenic | 40.0% | |
| CTTCGAGGTACAATGGATAT+GGG | - | tig0029741:22586-22605 | Msa1442090:intergenic | 40.0% | |
| TTGTTACCTTCGAGGTACAA+TGG | - | tig0029741:22593-22612 | Msa1442090:intergenic | 40.0% | |
| CCTACACAAAGACATTGGAA+TGG | - | tig0029741:22631-22650 | Msa1442090:intergenic | 40.0% | |
| CCATTCCAATGTCTTTGTGT+AGG | + | tig0029741:22628-22647 | Msa1442090:intron | 40.0% | |
| CTTCACCTACACAAAGACAT+TGG | - | tig0029741:22636-22655 | Msa1442090:intergenic | 40.0% | |
| ! | CTGGAAGCGTATAATTAGCA+AGG | + | tig0029741:22695-22714 | Msa1442090:intron | 40.0% |
| GAAGATGGTGAAGAACTACT+TGG | - | tig0029741:22763-22782 | Msa1442090:intergenic | 40.0% | |
| GGTTGTTAGATCACTAGATG+TGG | - | tig0029741:22809-22828 | Msa1442090:intergenic | 40.0% | |
| GATCTAACAACCATTGGAGT+CGG | + | tig0029741:22817-22836 | Msa1442090:intron | 40.0% | |
| ! | TTCAGGCAATCTATGGCTTT+TGG | + | tig0029741:22988-23007 | Msa1442090:intron | 40.0% |
| !! | TATGGCTTTTGGAAGCTCTT+CGG | + | tig0029741:22999-23018 | Msa1442090:intron | 40.0% |
| TAAAACAATCTGGACGCATG+TGG | - | tig0029741:23164-23183 | Msa1442090:intergenic | 40.0% | |
| ! | CTCTATGGGCTAAAACAATC+TGG | - | tig0029741:23174-23193 | Msa1442090:intergenic | 40.0% |
| GATCCTGAACTATTTGCATC+AGG | + | tig0029741:23228-23247 | Msa1442090:intron | 40.0% | |
| TTGCCTGATGCAAATAGTTC+AGG | - | tig0029741:23234-23253 | Msa1442090:intergenic | 40.0% | |
| TCAGGCAAGTTAAATCCTTC+AGG | + | tig0029741:23246-23265 | Msa1442090:intron | 40.0% | |
| CAGGCAAGTTAAATCCTTCA+GGG | + | tig0029741:23247-23266 | Msa1442090:intron | 40.0% | |
| ATCTACATGAAGATCCCTGA+AGG | - | tig0029741:23264-23283 | Msa1442090:intergenic | 40.0% | |
| ATCAAGTGAGCCATACAAGT+AGG | + | tig0029741:23290-23309 | Msa1442090:intron | 40.0% | |
| GTAGTCACTTCCTACTTGTA+TGG | - | tig0029741:23303-23322 | Msa1442090:intergenic | 40.0% | |
| AGGGCTAAATTTGCACATGA+TGG | - | tig0029741:23328-23347 | Msa1442090:intergenic | 40.0% | |
| GTCTCATTAAAGTCAATCCC+AGG | + | tig0029741:23408-23427 | Msa1442090:intron | 40.0% | |
| ! | AAGGATTTTCGCAAAGACCT+GGG | - | tig0029741:23428-23447 | Msa1442090:intergenic | 40.0% |
| AACACCCATTTATACCCAAC+TGG | + | tig0029741:23507-23526 | Msa1442090:intron | 40.0% | |
| CTAAAGGAGTGAAACCAGTT+GGG | - | tig0029741:23524-23543 | Msa1442090:intergenic | 40.0% | |
| GTTTCACTCCTTTAGGTGTT+CGG | + | tig0029741:23529-23548 | Msa1442090:intron | 40.0% | |
| AAAGCGAGAATTGGCCAAAA+TGG | - | tig0029741:23617-23636 | Msa1442090:intergenic | 40.0% | |
| ATAACGAGGATCATGAACCT+AGG | - | tig0029741:23659-23678 | Msa1442090:intergenic | 40.0% | |
| !! | TGTCAACGTTGACTTCATGT+CGG | + | tig0029741:23718-23737 | Msa1442090:intron | 40.0% |
| AGTTCCAGATGAAACTGATC+AGG | - | tig0029741:23808-23827 | Msa1442090:intergenic | 40.0% | |
| AAGGAAAGATAACCCAAACG+AGG | - | tig0029741:23874-23893 | Msa1442090:intergenic | 40.0% | |
| ! | CAACTTGTTTACAACCCAGT+AGG | - | tig0029741:24205-24224 | Msa1442090:intergenic | 40.0% |
| ACCAATGATGAATTAGAGGG+AGG | + | tig0029741:24382-24401 | Msa1442090:intron | 40.0% | |
| TCCTCCCTCTAATTCATCAT+TGG | - | tig0029741:24386-24405 | Msa1442090:intergenic | 40.0% | |
| GAATCGATATATCGAAGGTG+TGG | - | tig0029741:24737-24756 | Msa1442090:intergenic | 40.0% | |
| AACTAAGCCCAATAACCTAG+TGG | + | tig0029741:21770-21789 | Msa1442090:intron | 40.0% | |
| GGTCATTCCACTAGGTTATT+GGG | - | tig0029741:21780-21799 | Msa1442090:intergenic | 40.0% | |
| CTTCGTAAGCTTATCTCAGT+TGG | + | tig0029741:25163-25182 | Msa1442090:intron | 40.0% | |
| GTAAGCTTATCTCAGTTGGT+AGG | + | tig0029741:25167-25186 | Msa1442090:intron | 40.0% | |
| ACAGGGGTAAGTAACACAAT+TGG | - | tig0029741:25312-25331 | Msa1442090:intergenic | 40.0% | |
| GTTACCTTCACCAATGGATA+TGG | + | tig0029741:25398-25417 | Msa1442090:intron | 40.0% | |
| TTCACCATATCCATTGGTGA+AGG | - | tig0029741:25405-25424 | Msa1442090:intergenic | 40.0% | |
| TGGTGAAATCAATCGTAGAG+AGG | + | tig0029741:25418-25437 | Msa1442090:intron | 40.0% | |
| AAACACAAATTGGGGTAACG+AGG | + | tig0029741:25677-25696 | Msa1442090:CDS | 40.0% | |
| TTTCATGCGCCAATGAAAGT+TGG | + | tig0029741:25817-25836 | Msa1442090:intron | 40.0% | |
| GATATGCGTCAACAAACACA+AGG | + | tig0029741:26142-26161 | Msa1442090:intron | 40.0% | |
| !! | AACGGGTTGGGTAATTGATT+TGG | - | tig0029741:26226-26245 | Msa1442090:intergenic | 40.0% |
| CCATTGAAAATTGAACGGGT+TGG | - | tig0029741:26239-26258 | Msa1442090:intergenic | 40.0% | |
| ! | CCAACCCGTTCAATTTTCAA+TGG | + | tig0029741:26236-26255 | Msa1442090:intron | 40.0% |
| !! | GCAAAGTTTGGTTCTGGAAT+TGG | - | tig0029741:26508-26527 | Msa1442090:intergenic | 40.0% |
| ATTCCAGAACCAAACTTTGC+TGG | + | tig0029741:26508-26527 | Msa1442090:intron | 40.0% | |
| AGATTGGATCTGCAAATGCT+TGG | + | tig0029741:26538-26557 | Msa1442090:intron | 40.0% | |
| GATTGGATCTGCAAATGCTT+GGG | + | tig0029741:26539-26558 | Msa1442090:intron | 40.0% | |
| GCTTGGGTTCAGATAATTAG+TGG | + | tig0029741:26555-26574 | Msa1442090:intron | 40.0% | |
| ! | GGTTCAGATAATTAGTGGGT+TGG | + | tig0029741:26560-26579 | Msa1442090:intron | 40.0% |
| ! | TAGGTGCAAGTCGATTTACA+CGG | - | tig0029741:26600-26619 | Msa1442090:intergenic | 40.0% |
| ! | ATGCATTGGCATGCGTAATA+AGG | + | tig0029741:27049-27068 | Msa1442090:intron | 40.0% |
| !! | AAACTTGAGAGTACCGTTAC+TGG | + | tig0029741:27222-27241 | Msa1442090:CDS | 40.0% |
| !! | CCTAAGAAGCATGGTCTTTT+TGG | - | tig0029741:27291-27310 | Msa1442090:intergenic | 40.0% |
| CCAAAAAGACCATGCTTCTT+AGG | + | tig0029741:27288-27307 | Msa1442090:CDS | 40.0% | |
| AATCCCTCTTTCATGTCAGT+TGG | - | tig0029741:27321-27340 | Msa1442090:intergenic | 40.0% | |
| CTTGAAAGGCCATAAGTGAA+TGG | - | tig0029741:27402-27421 | Msa1442090:intergenic | 40.0% | |
| !! | GAATAGTGGGCAATCTTGAA+AGG | - | tig0029741:27416-27435 | Msa1442090:intergenic | 40.0% |
| AAGCACAACCCAATTTGCAA+CGG | + | tig0029741:27461-27480 | Msa1442090:CDS | 40.0% | |
| GATATAGGCCGTTGCAAATT+GGG | - | tig0029741:27472-27491 | Msa1442090:intergenic | 40.0% | |
| TCTGAGGAACGAATCCATAT+AGG | - | tig0029741:27494-27513 | Msa1442090:intergenic | 40.0% | |
| ! | TCCTCAGATTTGCTTCTTGA+AGG | + | tig0029741:27506-27525 | Msa1442090:CDS | 40.0% |
| ! | CCTCAGATTTGCTTCTTGAA+GGG | + | tig0029741:27507-27526 | Msa1442090:CDS | 40.0% |
| GGGAATACCTCTATATCCAA+AGG | + | tig0029741:27527-27546 | Msa1442090:CDS | 40.0% | |
| !!! | ACACATTTTGGTTGGTTTGG+TGG | + | tig0029741:27623-27642 | Msa1442090:intron | 40.0% |
| CATTACAGGTTACAGATCCT+TGG | + | tig0029741:27851-27870 | Msa1442090:intron | 40.0% | |
| TTCATTCCACCAAATCATCG+AGG | - | tig0029741:27950-27969 | Msa1442090:intergenic | 40.0% | |
| TGGTGGAATGAACAAAGAAG+TGG | + | tig0029741:27958-27977 | Msa1442090:CDS | 40.0% | |
| GGTGGAATGAACAAAGAAGT+GGG | + | tig0029741:27959-27978 | Msa1442090:CDS | 40.0% | |
| ! | CTTGCTTCTTTGGTGGTTTA+TGG | + | tig0029741:28181-28200 | Msa1442090:CDS | 40.0% |
| TATGGAGACTACTCAATGTG+AGG | + | tig0029741:28199-28218 | Msa1442090:CDS | 40.0% | |
| TTCTCTAAGTCGTCCTATTC+TGG | + | tig0029741:28269-28288 | Msa1442090:CDS | 40.0% | |
| GATATAATCCCCTCCAGAAT+AGG | - | tig0029741:28285-28304 | Msa1442090:intergenic | 40.0% | |
| ATATCTATGAAGCGGAAGAG+TGG | + | tig0029741:28300-28319 | Msa1442090:CDS | 40.0% | |
| TATCTATGAAGCGGAAGAGT+GGG | + | tig0029741:28301-28320 | Msa1442090:CDS | 40.0% | |
| !! | GGTTCTTAACTTGTGCCCTT+AGG | + | tig0029741:20757-20776 | Msa1442090:intron | 45.0% |
| GTTCCTCACAGATTCAAAGG+AGG | + | tig0029741:20957-20976 | Msa1442090:CDS | 45.0% | |
| AGGAGGAGCTCTCAATACAT+TGG | + | tig0029741:20974-20993 | Msa1442090:CDS | 45.0% | |
| !! | TGATTACAGCTAAGGGTGTC+AGG | + | tig0029741:21090-21109 | Msa1442090:intron | 45.0% |
| !! | GATTACAGCTAAGGGTGTCA+GGG | + | tig0029741:21091-21110 | Msa1442090:intron | 45.0% |
| ACAAAGTGGAAGGGAATGGA+TGG | + | tig0029741:21407-21426 | Msa1442090:CDS | 45.0% | |
| !! | ATGGATGGATTAAGAGGTCC+AGG | + | tig0029741:21422-21441 | Msa1442090:CDS | 45.0% |
| TTAAGAGGTCCAGGTCTAAC+CGG | + | tig0029741:21431-21450 | Msa1442090:CDS | 45.0% | |
| GGGTCATTCCACTAGGTTAT+TGG | - | tig0029741:21781-21800 | Msa1442090:intergenic | 45.0% | |
| ! | GGTTAATGGGTCATTCCACT+AGG | - | tig0029741:21788-21807 | Msa1442090:intergenic | 45.0% |
| ATCCTCAATGGACATCCAAG+GGG | - | tig0029741:21853-21872 | Msa1442090:intergenic | 45.0% | |
| GCCTCGTTAAAAACCTTACC+AGG | + | tig0029741:21964-21983 | Msa1442090:intron | 45.0% | |
| ACCTTACCAGGAAAACCCAA+TGG | + | tig0029741:21976-21995 | Msa1442090:intron | 45.0% | |
| CCTTACCAGGAAAACCCAAT+GGG | + | tig0029741:21977-21996 | Msa1442090:intron | 45.0% | |
| ! | TTTGTCCCATTGGGTTTTCC+TGG | - | tig0029741:21985-22004 | Msa1442090:intergenic | 45.0% |
| AACCCAATGGGACAAAACCT+TGG | + | tig0029741:21989-22008 | Msa1442090:intron | 45.0% | |
| !! | CACCAAGGTTTTGTCCCATT+GGG | - | tig0029741:21994-22013 | Msa1442090:intergenic | 45.0% |
| !! | TCACCAAGGTTTTGTCCCAT+TGG | - | tig0029741:21995-22014 | Msa1442090:intergenic | 45.0% |
| ATGGGACAAAACCTTGGTGA+AGG | + | tig0029741:21995-22014 | Msa1442090:intron | 45.0% | |
| ACCCGTGATCTTCAGAAGAA+TGG | - | tig0029741:22184-22203 | Msa1442090:intergenic | 45.0% | |
| CCTTCGAGGTACAATGGATA+TGG | - | tig0029741:22587-22606 | Msa1442090:intergenic | 45.0% | |
| CCATATCCATTGTACCTCGA+AGG | + | tig0029741:22584-22603 | Msa1442090:intron | 45.0% | |
| AGTTCTTCACCATCTTCTCG+AGG | + | tig0029741:22766-22785 | Msa1442090:intron | 45.0% | |
| ! | CCTTTTAGACCTCGAGAAGA+TGG | - | tig0029741:22778-22797 | Msa1442090:intergenic | 45.0% |
| CCATCTTCTCGAGGTCTAAA+AGG | + | tig0029741:22775-22794 | Msa1442090:intron | 45.0% | |
| !! | ATGGCTTTTGGAAGCTCTTC+GGG | + | tig0029741:23000-23019 | Msa1442090:intron | 45.0% |
| ! | CAAGGATTTTCGCAAAGACC+TGG | - | tig0029741:23429-23448 | Msa1442090:intergenic | 45.0% |
| AAAGCAAGACTCGTTGCTCA+AGG | - | tig0029741:23447-23466 | Msa1442090:intergenic | 45.0% | |
| CCTAAAGGAGTGAAACCAGT+TGG | - | tig0029741:23525-23544 | Msa1442090:intergenic | 45.0% | |
| ! | CCAACTGGTTTCACTCCTTT+AGG | + | tig0029741:23522-23541 | Msa1442090:intron | 45.0% |
| !! | TGACTTCATGTCGGTTCCAT+TGG | + | tig0029741:23727-23746 | Msa1442090:intron | 45.0% |
| GGTACCTGATCAGTTTCATC+TGG | + | tig0029741:23801-23820 | Msa1442090:intron | 45.0% | |
| CTGAAGCATGGTAGACCAAT+CGG | - | tig0029741:23944-23963 | Msa1442090:intergenic | 45.0% | |
| GGGTCATTCCACTAGGTTAT+TGG | - | tig0029741:21781-21800 | Msa1442090:intergenic | 45.0% | |
| ! | GGTTAATGGGTCATTCCACT+AGG | - | tig0029741:21788-21807 | Msa1442090:intergenic | 45.0% |
| !!! | TCTTATTTTGGTTGTGGCCG+AGG | - | tig0029741:25229-25248 | Msa1442090:intergenic | 45.0% |
| ! | TGCGCCAATGAAAGTTGGTT+CGG | + | tig0029741:25822-25841 | Msa1442090:intron | 45.0% |
| CCATCCGAACCAACTTTCAT+TGG | - | tig0029741:25829-25848 | Msa1442090:intergenic | 45.0% | |
| !! | CCAATGAAAGTTGGTTCGGA+TGG | + | tig0029741:25826-25845 | Msa1442090:intron | 45.0% |
| GGGAGTGAATCATACCCATA+AGG | + | tig0029741:25875-25894 | Msa1442090:intron | 45.0% | |
| ! | ATTTAGGGCTATACACGGGT+TGG | + | tig0029741:26184-26203 | Msa1442090:intron | 45.0% |
| ! | TTTAGGGCTATACACGGGTT+GGG | + | tig0029741:26185-26204 | Msa1442090:intron | 45.0% |
| ! | GGTGGGCCCATAATCATTTT+TGG | + | tig0029741:26367-26386 | Msa1442090:intron | 45.0% |
| ! | CAACCAGCAAAGTTTGGTTC+TGG | - | tig0029741:26514-26533 | Msa1442090:intergenic | 45.0% |
| CTAGCGGTGATCAGATTCAT+AGG | - | tig0029741:26619-26638 | Msa1442090:intergenic | 45.0% | |
| TAACGAGACGGGTGGAATAT+AGG | - | tig0029741:26707-26726 | Msa1442090:intergenic | 45.0% | |
| GACAATTATAACGAGACGGG+TGG | - | tig0029741:26715-26734 | Msa1442090:intergenic | 45.0% | |
| ATGAGTCATCTATTGCGGGA+CGG | - | tig0029741:26864-26883 | Msa1442090:intergenic | 45.0% | |
| TGCTCCAACTGACATGAAAG+AGG | + | tig0029741:27314-27333 | Msa1442090:CDS | 45.0% | |
| GCTCCAACTGACATGAAAGA+GGG | + | tig0029741:27315-27334 | Msa1442090:CDS | 45.0% | |
| GGATATAGGCCGTTGCAAAT+TGG | - | tig0029741:27473-27492 | Msa1442090:intergenic | 45.0% | |
| GCAACGGCCTATATCCTATA+TGG | + | tig0029741:27477-27496 | Msa1442090:CDS | 45.0% | |
| CCCTTCAAGAAGCAAATCTG+AGG | - | tig0029741:27510-27529 | Msa1442090:intergenic | 45.0% | |
| TCTAAGTCGTCCTATTCTGG+AGG | + | tig0029741:28272-28291 | Msa1442090:CDS | 45.0% | |
| CTAAGTCGTCCTATTCTGGA+GGG | + | tig0029741:28273-28292 | Msa1442090:CDS | 45.0% | |
| ! | TAAGTCGTCCTATTCTGGAG+GGG | + | tig0029741:28274-28293 | Msa1442090:CDS | 45.0% |
| !! | AAAAACAATAAAAAAAAAAA+AGG | - | tig0029741:20836-20855 | Msa1442090:intergenic | 5.0% |
| !!! | TTTTTTTTTTGAATTTATAA+TGG | + | tig0029741:25494-25513 | Msa1442090:intron | 5.0% |
| !!! | TAATAATTTTATTAAAATGT+GGG | - | tig0029741:26280-26299 | Msa1442090:intergenic | 5.0% |
| !!! | ATAATAATTTTATTAAAATG+TGG | - | tig0029741:26281-26300 | Msa1442090:intergenic | 5.0% |
| !!! | TAAATTTTTAAAAAAAATTG+TGG | + | tig0029741:26306-26325 | Msa1442090:intron | 5.0% |
| TGGTGACCGATAGACCTTCT+CGG | + | tig0029741:20425-20444 | Msa1442090:CDS | 50.0% | |
| CTCGATCCGAGAAGGTCTAT+CGG | - | tig0029741:20434-20453 | Msa1442090:intergenic | 50.0% | |
| GCTCCTCCTTTGAATCTGTG+AGG | - | tig0029741:20963-20982 | Msa1442090:intergenic | 50.0% | |
| GTGTCAGGGCTAATCAGCAA+TGG | + | tig0029741:21105-21124 | Msa1442090:CDS | 50.0% | |
| ! | TTTCCACTACCGGTTAGACC+TGG | - | tig0029741:21443-21462 | Msa1442090:intergenic | 50.0% |
| TCCTCAATGGACATCCAAGG+GGG | - | tig0029741:21852-21871 | Msa1442090:intergenic | 50.0% | |
| CGAGGCAGTTCACACTCAAA+AGG | - | tig0029741:21950-21969 | Msa1442090:intergenic | 50.0% | |
| ! | CCCATTGGGTTTTCCTGGTA+AGG | - | tig0029741:21980-21999 | Msa1442090:intergenic | 50.0% |
| ACAACCATTGGAGTCGGCAA+TGG | + | tig0029741:22823-22842 | Msa1442090:intron | 50.0% | |
| !! | TCATCCATTGCCGACTCCAA+TGG | - | tig0029741:22830-22849 | Msa1442090:intergenic | 50.0% |
| !! | CGATTGGTCTACCATGCTTC+AGG | + | tig0029741:23942-23961 | Msa1442090:intron | 50.0% |
| TCTCAACTGTGCCTGAAGCA+TGG | - | tig0029741:23956-23975 | Msa1442090:intergenic | 50.0% | |
| AAGGTTCGAGGTTCGAACCT+CGG | + | tig0029741:25209-25228 | Msa1442090:intron | 50.0% | |
| !! | GGGTTGGGTTGGAACAAGTT+TGG | + | tig0029741:26200-26219 | Msa1442090:intron | 50.0% |
| ATAACAGCAGGTCGGATCCA+TGG | + | tig0029741:26466-26485 | Msa1442090:intron | 50.0% | |
| TAACAGCAGGTCGGATCCAT+GGG | + | tig0029741:26467-26486 | Msa1442090:intron | 50.0% | |
| CTGCTGCAACCAGCAAAGTT+TGG | - | tig0029741:26520-26539 | Msa1442090:intergenic | 50.0% | |
| ! | CTTTGCTGGTTGCAGCAGAT+TGG | + | tig0029741:26522-26541 | Msa1442090:intron | 50.0% |
| GTGGAGGAGATAGCCAGTAA+CGG | - | tig0029741:27238-27257 | Msa1442090:intergenic | 50.0% | |
| TTGATCTCCATCCTCTGCAG+TGG | - | tig0029741:27257-27276 | Msa1442090:intergenic | 50.0% | |
| GGAGCACATCCTAAGAAGCA+TGG | - | tig0029741:27300-27319 | Msa1442090:intergenic | 50.0% | |
| ! | TGATGGTGCAGCATTGCTCA+TGG | + | tig0029741:28125-28144 | Msa1442090:CDS | 50.0% |
| CGATAGACCTTCTCGGATCG+AGG | + | tig0029741:20432-20451 | Msa1442090:CDS | 55.0% | |
| TCCCCCTTGGATGTCCATTG+AGG | + | tig0029741:21848-21867 | Msa1442090:intron | 55.0% | |
| CCTGTCGTCCGAACACCTAA+AGG | - | tig0029741:23540-23559 | Msa1442090:intergenic | 55.0% | |
| CCTTTAGGTGTTCGGACGAC+AGG | + | tig0029741:23537-23556 | Msa1442090:intron | 55.0% | |
| GTCATCTATTGCGGGACGGA+GGG | - | tig0029741:26860-26879 | Msa1442090:intergenic | 55.0% | |
| AGTCATCTATTGCGGGACGG+AGG | - | tig0029741:26861-26880 | Msa1442090:intergenic | 55.0% | |
| ATCTCCTCCACTGCAGAGGA+TGG | + | tig0029741:27247-27266 | Msa1442090:CDS | 55.0% | |
| ATCTCCATCCTCTGCAGTGG+AGG | - | tig0029741:27254-27273 | Msa1442090:intergenic | 55.0% | |
| CTGGTGGCTCCTCGATGATT+TGG | + | tig0029741:27938-27957 | Msa1442090:CDS | 55.0% | |
| ! | GTGGCTCCTCGATGATTTGG+TGG | + | tig0029741:27941-27960 | Msa1442090:CDS | 55.0% |
| ACGGGTACCTCGATCCGAGA+AGG | - | tig0029741:20442-20461 | Msa1442090:intergenic | 60.0% | |
| GGTCCAGGTCTAACCGGTAG+TGG | + | tig0029741:21437-21456 | Msa1442090:CDS | 60.0% | |
| !! | GGGCTATACACGGGTTGGGT+TGG | + | tig0029741:26189-26208 | Msa1442090:intron | 60.0% |
| GGCTATCTCCTCCACTGCAG+AGG | + | tig0029741:27243-27262 | Msa1442090:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0029741 | gene | 20376 | 28468 | 20376 | ID=Msa1442090;Name=Msa1442090 |
| tig0029741 | mRNA | 20376 | 28468 | 20376 | ID=Msa1442090-mRNA-1;Parent=Msa1442090;Name=Msa1442090-mRNA-1;_AED=0.20;_eAED=0.20;_QI=0|0.66|0.71|1|1|0.85|7|142|496 |
| tig0029741 | exon | 20376 | 20453 | 20376 | ID=Msa1442090-mRNA-1:exon:13196;Parent=Msa1442090-mRNA-1 |
| tig0029741 | exon | 20894 | 20995 | 20894 | ID=Msa1442090-mRNA-1:exon:13197;Parent=Msa1442090-mRNA-1 |
| tig0029741 | exon | 21099 | 21311 | 21099 | ID=Msa1442090-mRNA-1:exon:13198;Parent=Msa1442090-mRNA-1 |
| tig0029741 | exon | 21407 | 21509 | 21407 | ID=Msa1442090-mRNA-1:exon:13199;Parent=Msa1442090-mRNA-1 |
| tig0029741 | exon | 25520 | 25698 | 25520 | ID=Msa1442090-mRNA-1:exon:13200;Parent=Msa1442090-mRNA-1 |
| tig0029741 | exon | 27201 | 27548 | 27201 | ID=Msa1442090-mRNA-1:exon:13201;Parent=Msa1442090-mRNA-1 |
| tig0029741 | exon | 27859 | 28468 | 27859 | ID=Msa1442090-mRNA-1:exon:13202;Parent=Msa1442090-mRNA-1 |
| tig0029741 | CDS | 20376 | 20453 | 20376 | ID=Msa1442090-mRNA-1:cds;Parent=Msa1442090-mRNA-1 |
| tig0029741 | CDS | 20894 | 20995 | 20894 | ID=Msa1442090-mRNA-1:cds;Parent=Msa1442090-mRNA-1 |
| tig0029741 | CDS | 21099 | 21311 | 21099 | ID=Msa1442090-mRNA-1:cds;Parent=Msa1442090-mRNA-1 |
| tig0029741 | CDS | 21407 | 21509 | 21407 | ID=Msa1442090-mRNA-1:cds;Parent=Msa1442090-mRNA-1 |
| tig0029741 | CDS | 25520 | 25698 | 25520 | ID=Msa1442090-mRNA-1:cds;Parent=Msa1442090-mRNA-1 |
| tig0029741 | CDS | 27201 | 27548 | 27201 | ID=Msa1442090-mRNA-1:cds;Parent=Msa1442090-mRNA-1 |
| tig0029741 | CDS | 27859 | 28326 | 27859 | ID=Msa1442090-mRNA-1:cds;Parent=Msa1442090-mRNA-1 |
| tig0029741 | three_prime_UTR | 28327 | 28468 | 28327 | ID=Msa1442090-mRNA-1:three_prime_utr;Parent=Msa1442090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
