AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1443690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1443690 MtrunA17_Chr1g0198601 97.090 378 11 0 1 378 1 378 0.0 764
Msa1443690 MtrunA17_Chr5g0422621 57.368 380 126 14 1 374 10 359 9.88e-126 366
Msa1443690 MtrunA17_Chr4g0062921 35.404 322 144 7 2 294 29 315 1.54e-48 169
Msa1443690 MtrunA17_Chr4g0045361 34.930 355 146 11 10 309 44 368 8.96e-43 154
Msa1443690 MtrunA17_Chr5g0402631 33.636 330 142 12 2 324 56 315 1.81e-33 127
Msa1443690 MtrunA17_Chr2g0291021 56.061 66 29 0 211 276 49 114 1.18e-15 77.4
Msa1443690 MtrunA17_Chr2g0294911 37.008 127 57 4 210 323 210 326 2.42e-15 77.4
Msa1443690 MtrunA17_Chr4g0067981 53.521 71 32 1 210 280 214 283 6.83e-15 76.3
Msa1443690 MtrunA17_Chr2g0304841 38.462 117 63 4 209 323 211 320 7.32e-15 76.3
Msa1443690 MtrunA17_Chr7g0254981 55.385 65 29 0 211 275 50 114 1.18e-14 73.6
Msa1443690 MtrunA17_Chr4g0074411 53.968 63 28 1 209 271 199 260 1.78e-14 75.1
Msa1443690 MtrunA17_Chr1g0161431 48.611 72 36 1 200 271 189 259 3.44e-14 73.9
Msa1443690 MtrunA17_Chr3g0137101 45.679 81 42 2 204 284 191 269 4.23e-14 73.9
Msa1443690 MtrunA17_Chr5g0400241 51.515 66 31 1 204 269 304 368 7.25e-14 72.8
Msa1443690 MtrunA17_Chr5g0417521 61.818 55 21 0 211 265 15 69 9.76e-14 71.6
Msa1443690 MtrunA17_Chr4g0074401 50.000 66 32 1 206 271 198 262 1.04e-13 72.4
Msa1443690 MtrunA17_Chr7g0274471 54.839 62 28 0 211 272 218 279 2.10e-13 71.2
Msa1443690 MtrunA17_Chr4g0054981 41.489 94 51 2 178 268 274 366 2.25e-13 71.6
Msa1443690 MtrunA17_Chr1g0149841 52.381 63 29 1 209 271 189 250 2.44e-13 71.2
Msa1443690 MtrunA17_Chr7g0261911 43.902 82 44 1 211 292 262 341 2.72e-13 70.9
Msa1443690 MtrunA17_Chr2g0290991 60.000 55 22 0 211 265 39 93 6.15e-13 68.9
Msa1443690 MtrunA17_Chr8g0356501 54.545 66 29 1 211 276 37 101 6.47e-13 69.3
Msa1443690 MtrunA17_Chr1g0190301 50.794 63 31 0 211 273 175 237 7.35e-13 69.3
Msa1443690 MtrunA17_Chr4g0031961 43.243 74 41 1 207 280 127 199 8.68e-13 68.6
Msa1443690 MtrunA17_Chr2g0310011 60.000 55 22 0 211 265 35 89 1.14e-12 68.6
Msa1443690 MtrunA17_Chr6g0461641 48.529 68 35 0 211 278 42 109 1.17e-12 68.9
Msa1443690 MtrunA17_Chr4g0042451 58.182 55 23 0 211 265 17 71 1.24e-12 68.2
Msa1443690 MtrunA17_Chr2g0321461 56.364 55 24 0 211 265 45 99 1.32e-12 68.6
Msa1443690 MtrunA17_Chr1g0175091 51.667 60 29 0 211 270 258 317 1.36e-12 68.6
Msa1443690 MtrunA17_Chr7g0255711 40.244 82 45 2 188 269 71 148 1.38e-12 67.8
Msa1443690 MtrunA17_Chr1g0175081 39.744 78 32 1 188 265 14 76 1.44e-12 63.5
Msa1443690 MtrunA17_Chr1g0149831 45.588 68 33 1 209 276 126 189 1.50e-12 66.6
Msa1443690 MtrunA17_Chr7g0275891 42.857 84 36 2 209 280 189 272 1.73e-12 67.8
Msa1443690 MtrunA17_Chr4g0040481 37.895 95 46 2 209 303 156 237 2.83e-12 67.8
Msa1443690 MtrunA17_Chr4g0009901 48.571 70 35 1 200 269 157 225 3.10e-12 66.6
Msa1443690 MtrunA17_Chr1g0197171 58.182 55 23 0 211 265 44 98 3.82e-12 66.2
Msa1443690 MtrunA17_Chr2g0324891 45.070 71 38 1 209 279 159 228 5.67e-12 66.6
Msa1443690 MtrunA17_Chr8g0376881 46.479 71 37 1 210 280 208 277 5.70e-12 67.0
Msa1443690 MtrunA17_Chr5g0409731 50.820 61 28 1 211 269 25 85 1.84e-11 64.3
Msa1443690 MtrunA17_Chr4g0009981 42.857 77 43 1 210 286 115 190 2.23e-11 63.5
Msa1443690 MtrunA17_Chr3g0123131 40.698 86 45 2 200 280 183 267 2.57e-11 65.1
Msa1443690 MtrunA17_Chr6g0473731 43.243 74 41 1 210 283 94 166 3.05e-11 64.7
Msa1443690 MtrunA17_Chr7g0258551 46.269 67 36 0 211 277 212 278 3.87e-11 63.9
Msa1443690 MtrunA17_Chr2g0288601 55.102 49 22 0 213 261 73 121 4.74e-11 60.1
Msa1443690 MtrunA17_Chr4g0009851 40.506 79 46 1 208 286 166 243 7.36e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1443690 AT1G68670.1 47.929 338 126 12 10 326 16 324 1.61e-79 248
Msa1443690 AT1G25550.1 46.386 332 125 11 10 328 20 311 1.69e-77 243
Msa1443690 AT3G25790.1 43.869 367 166 8 10 372 20 350 4.72e-75 237
Msa1443690 AT1G13300.1 43.207 368 148 12 11 368 20 336 5.72e-71 226
Msa1443690 AT1G25550.2 49.231 260 104 8 10 261 20 259 1.16e-66 213
Msa1443690 AT3G25790.2 46.457 254 109 4 9 261 19 246 1.74e-56 186
Msa1443690 AT2G03500.1 35.802 324 126 9 8 294 36 314 1.83e-48 170
Msa1443690 AT4G37180.1 33.935 277 109 8 11 269 48 268 3.05e-33 127
Msa1443690 AT4G37180.2 33.574 277 117 8 11 269 48 275 1.40e-30 120
Msa1443690 AT1G49560.1 32.542 295 132 9 10 293 30 268 4.60e-30 118
Msa1443690 AT4G37180.3 33.086 269 106 8 11 261 48 260 1.39e-28 113
Msa1443690 AT1G49560.2 31.939 263 118 8 10 261 30 242 3.69e-23 97.8
Msa1443690 AT2G01060.1 57.812 64 27 0 211 274 15 78 2.07e-15 76.3
Msa1443690 AT3G16857.3 35.252 139 79 3 199 336 155 283 8.52e-15 76.3
Msa1443690 AT3G16857.2 34.752 141 81 3 199 338 225 355 9.86e-15 76.3
Msa1443690 AT3G16857.1 34.752 141 81 3 199 338 225 355 1.03e-14 76.3
Msa1443690 AT5G58080.1 50.000 66 32 1 204 269 187 251 4.19e-14 74.3
Msa1443690 AT3G04030.1 53.846 65 30 0 211 275 45 109 9.04e-14 72.4
Msa1443690 AT3G04030.3 53.846 65 30 0 211 275 45 109 1.06e-13 72.4
Msa1443690 AT2G25180.1 31.902 163 94 5 209 356 193 353 1.14e-13 72.8
Msa1443690 AT5G05090.1 45.570 79 41 2 192 269 61 138 1.77e-13 70.5
Msa1443690 AT5G06800.3 53.226 62 29 0 211 272 192 253 2.79e-13 70.1
Msa1443690 AT5G18240.2 58.182 55 23 0 211 265 45 99 3.68e-13 70.9
Msa1443690 AT5G18240.3 58.182 55 23 0 211 265 45 99 3.68e-13 70.9
Msa1443690 AT5G18240.5 58.182 55 23 0 211 265 45 99 4.06e-13 70.5
Msa1443690 AT5G18240.1 58.182 55 23 0 211 265 45 99 4.17e-13 70.5
Msa1443690 AT5G18240.4 58.182 55 23 0 211 265 45 99 4.17e-13 70.5
Msa1443690 AT2G01760.3 44.156 77 42 1 210 286 134 209 5.02e-13 69.7
Msa1443690 AT5G44190.2 43.750 80 44 1 200 279 136 214 6.05e-13 69.7
Msa1443690 AT5G44190.1 43.750 80 44 1 200 279 136 214 6.93e-13 69.7
Msa1443690 AT2G01760.2 46.575 73 38 1 210 282 227 298 6.94e-13 70.1
Msa1443690 AT2G01760.1 44.156 77 42 1 210 286 199 274 7.52e-13 69.7
Msa1443690 AT5G06800.1 53.226 62 29 0 211 272 192 253 1.00e-12 69.3
Msa1443690 AT5G06800.2 53.226 62 29 0 211 272 192 253 1.05e-12 69.3
Msa1443690 AT3G10760.1 44.444 81 43 2 190 269 83 162 1.06e-12 68.9
Msa1443690 AT2G40970.1 45.070 71 38 1 199 269 93 162 1.10e-12 67.8
Msa1443690 AT3G46640.3 33.113 151 92 4 134 276 59 208 1.47e-12 68.6
Msa1443690 AT3G46640.2 46.269 67 35 1 210 276 143 208 1.51e-12 68.2
Msa1443690 AT3G46640.1 46.269 67 35 1 210 276 143 208 1.51e-12 68.2
Msa1443690 AT5G45580.2 44.595 74 41 0 211 284 23 96 1.52e-12 67.8
Msa1443690 AT1G79430.2 60.000 55 22 0 211 265 34 88 1.58e-12 68.6
Msa1443690 AT5G45580.1 44.595 74 41 0 211 284 7 80 1.59e-12 67.4
Msa1443690 AT3G04450.3 51.667 60 29 0 211 270 238 297 1.67e-12 68.2
Msa1443690 AT5G59570.2 38.318 107 64 2 163 269 94 198 2.20e-12 67.8
Msa1443690 AT5G59570.1 38.318 107 64 2 163 269 94 198 2.20e-12 67.8
Msa1443690 AT3G24120.1 58.182 55 23 0 211 265 41 95 2.30e-12 67.4
Msa1443690 AT5G29000.4 49.206 63 32 0 211 273 231 293 2.47e-12 67.4
Msa1443690 AT4G13640.2 58.182 55 23 0 211 265 37 91 2.60e-12 67.4
Msa1443690 AT3G24120.2 58.182 55 23 0 211 265 41 95 2.64e-12 67.4
Msa1443690 AT4G13640.1 58.182 55 23 0 211 265 37 91 2.73e-12 67.4
Msa1443690 AT3G13040.3 52.459 61 29 0 210 270 240 300 3.02e-12 68.2
Msa1443690 AT3G13040.1 52.459 61 29 0 210 270 240 300 3.02e-12 68.2
Msa1443690 AT3G13040.2 52.459 61 29 0 210 270 240 300 3.02e-12 68.2
Msa1443690 AT3G04450.1 51.667 60 29 0 211 270 238 297 3.21e-12 68.2
Msa1443690 AT3G04450.4 51.667 60 29 0 211 270 198 257 3.71e-12 67.8
Msa1443690 AT3G04450.2 51.667 60 29 0 211 270 198 257 3.71e-12 67.8
Msa1443690 AT2G20570.1 47.945 73 37 1 207 279 149 220 4.22e-12 67.8
Msa1443690 AT3G04030.2 52.308 65 30 1 211 275 45 108 5.80e-12 67.0
Msa1443690 AT5G29000.2 49.206 63 32 0 211 273 231 293 5.83e-12 67.0
Msa1443690 AT5G29000.1 49.206 63 32 0 211 273 188 250 6.16e-12 67.0
Msa1443690 AT5G29000.3 49.206 63 32 0 211 273 188 250 6.16e-12 67.0
Msa1443690 AT4G28610.1 51.667 60 29 0 211 270 225 284 6.71e-12 67.0
Msa1443690 AT3G12730.1 56.364 55 24 0 211 265 23 77 7.60e-12 65.1
Msa1443690 AT2G42660.1 52.632 57 27 0 216 272 55 111 1.06e-11 65.1
Msa1443690 AT2G38300.1 51.923 52 25 0 213 264 56 107 1.83e-11 65.1
Msa1443690 AT4G31920.1 42.105 76 43 1 204 279 176 250 2.34e-11 65.5
Msa1443690 AT2G06020.1 50.909 55 27 0 211 265 86 140 2.57e-11 64.3
Msa1443690 AT1G49190.1 36.486 74 44 1 196 266 200 273 5.86e-11 63.9
Msa1443690 AT4G04605.1 51.923 52 25 0 213 264 16 67 7.82e-11 62.0

Find 93 sgRNAs with CRISPR-Local

Find 241 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTAACTCTATCTTCTTTA+TGG 0.063110 tig0030496:-33339 None:intergenic
CACAATGCAGCGTTTCAAAA+TGG 0.179894 tig0030496:+32600 Msa1443690:exon
ACAAAAGTGGTTGCACCTTC+TGG 0.247597 tig0030496:+34154 Msa1443690:CDS
CATATCTACAAACCTGTAAA+TGG 0.279375 tig0030496:-33748 None:intergenic
TGAAGTCAAAAGCCATTTAC+AGG 0.284068 tig0030496:+33736 Msa1443690:CDS
AACGAAAGAGGAAGTTCTTT+AGG 0.297245 tig0030496:-32679 None:intergenic
ATATCGATGAAGAAAGAATA+TGG 0.311789 tig0030496:-32494 None:intergenic
GATGTCTCCAACATTGTTAC+TGG 0.321828 tig0030496:-33443 None:intergenic
ATTACCTCTCTGATTTGCTT+TGG 0.356836 tig0030496:-33689 None:intergenic
CTTTCGTTATTTGTTGAACT+TGG 0.382926 tig0030496:-34028 None:intergenic
AATAACATTATACAACAAAA+AGG 0.387476 tig0030496:-34437 None:intergenic
GGCTTAGATCTGTTCAGTTA+TGG 0.389861 tig0030496:+33080 Msa1443690:CDS
CCCCACCATACTCTTGTTGT+TGG 0.395076 tig0030496:-34102 None:intergenic
GGAATAAACTCTTCTAAAAC+AGG 0.409660 tig0030496:-32938 None:intergenic
TTTGTCCAACAACAAGAGTA+TGG 0.414336 tig0030496:+34097 Msa1443690:CDS
ATTATTACCTCTTCAGATGA+AGG 0.417768 tig0030496:-33112 None:intergenic
GACGTTCTTGTTCTAATGCT+TGG 0.420567 tig0030496:-32639 None:intergenic
ACAATGCAGCGTTTCAAAAT+GGG 0.423030 tig0030496:+32601 Msa1443690:exon
GTAGCTTCATCAACAACAAC+AGG 0.429695 tig0030496:+34124 Msa1443690:CDS
TGTGGAAGCAAGAGAGAGAG+TGG 0.430560 tig0030496:-32519 None:intergenic
TGCTCAAACCTCTTGAACTC+TGG 0.432408 tig0030496:-34226 None:intergenic
GCAGCGACGGTGCTGGTCGC+AGG 0.434166 tig0030496:+33495 Msa1443690:CDS
GTTTATTCCAATTAAGAAAA+GGG 0.437351 tig0030496:+32952 Msa1443690:CDS
GTTGCACAAGCGATTCTTGA+AGG 0.440339 tig0030496:+33519 Msa1443690:CDS
GAATGAAGGAGAAACAAAGA+AGG 0.444900 tig0030496:-32403 None:intergenic
AGTTTATTCCAATTAAGAAA+AGG 0.446516 tig0030496:+32951 Msa1443690:CDS
ACTCTATCTTCTTTATGGAA+TGG 0.449526 tig0030496:-33334 None:intergenic
GCTTGTCGACAACAATTGTC+TGG 0.459321 tig0030496:+32848 Msa1443690:CDS
CATCAAAAGAGACGAGAAAG+AGG 0.461312 tig0030496:+33462 Msa1443690:CDS
TTGAAGGCGCTTCAGCAACT+TGG 0.469776 tig0030496:+33535 Msa1443690:CDS
GTGGAAGCAAGAGAGAGAGT+GGG 0.472009 tig0030496:-32518 None:intergenic
GAGACAGTTCGCGAAGAACT+CGG 0.475399 tig0030496:-32374 None:intergenic
TATCGATGAAGAAAGAATAT+GGG 0.478424 tig0030496:-32493 None:intergenic
AGAGAGGTAATGAATGTTGA+TGG 0.478733 tig0030496:+33701 Msa1443690:CDS
GCATTCAATCTCAGATGAAA+GGG 0.480171 tig0030496:+34246 Msa1443690:CDS
AGGTGCTGCTGTTTGTGAAT+TGG 0.480961 tig0030496:-34053 None:intergenic
CTCTCTGATTTGCTTTGGTG+TGG 0.488332 tig0030496:-33684 None:intergenic
GTGTTGGAATTGAAGAGAAA+TGG 0.488831 tig0030496:+33289 Msa1443690:CDS
ACAACTGAGTATAATTTGAA+TGG 0.489356 tig0030496:+32875 Msa1443690:CDS
TCAATAACCAGGGGAAGTAT+TGG 0.491273 tig0030496:-34335 None:intergenic
TTGGTCTTCTAGTATGCAAC+CGG 0.498211 tig0030496:-34009 None:intergenic
ACAAGTGAATTGTTAAGTAA+AGG 0.498649 tig0030496:+33367 Msa1443690:CDS
AGACAGTTCGCGAAGAACTC+GGG 0.499976 tig0030496:-32373 None:intergenic
ATGTTGCCTACAAGGACAAA+AGG 0.503411 tig0030496:-34073 None:intergenic
AAGGCGCTTCAGCAACTTGG+TGG 0.504237 tig0030496:+33538 Msa1443690:CDS
ACTTGAGGATGTGTGGCTAC+TGG 0.518302 tig0030496:-34187 None:intergenic
TTCTTAATTGTAGCAACTTG+AGG 0.518381 tig0030496:-34202 None:intergenic
AGCATTCAATCTCAGATGAA+AGG 0.522044 tig0030496:+34245 Msa1443690:CDS
AAGAGAAATGGAAGTGGTGG+TGG 0.523432 tig0030496:+33301 Msa1443690:CDS
TGGAAGCAAGAGAGAGAGTG+GGG 0.523886 tig0030496:-32517 None:intergenic
TGTGTAGAGGATGAAGATGT+AGG 0.529070 tig0030496:-34304 None:intergenic
AATGAAGGAGAAACAAAGAA+GGG 0.534302 tig0030496:-32402 None:intergenic
TTAAGAAACCAGAGTTCAAG+AGG 0.534779 tig0030496:+34218 Msa1443690:CDS
TCCAACAACAAGAGTATGGT+GGG 0.538170 tig0030496:+34101 Msa1443690:CDS
AATTATAGAGTTAAAATACT+CGG 0.540154 tig0030496:+34486 Msa1443690:three_prime_UTR
AGAGAAAGCAGCGACGGTGC+TGG 0.540249 tig0030496:+33488 Msa1443690:CDS
AGAACTCACGGCAGCTACAC+CGG 0.545612 tig0030496:-33404 None:intergenic
TTTGAAACGCTGCATTGTGA+AGG 0.557389 tig0030496:-32596 None:intergenic
GTAACGAGTTCTAACGAAAG+AGG 0.565892 tig0030496:-32691 None:intergenic
GGCAGCTACACCGGTCGAAG+AGG 0.574491 tig0030496:-33395 None:intergenic
AAAATTAAAACTCAATAACC+AGG 0.575545 tig0030496:-34346 None:intergenic
ATAATCGATTCTGAAGAGAA+TGG 0.575641 tig0030496:-32547 None:intergenic
ATAATAAGAAGAAATCTGAC+TGG 0.576819 tig0030496:+33059 Msa1443690:CDS
AGGAAAAGAGAAAGCAGCGA+CGG 0.577313 tig0030496:+33482 Msa1443690:CDS
ACTACTACCAATACTTCCCC+TGG 0.577357 tig0030496:+34328 Msa1443690:CDS
TAAGAAAACAGTGCCTGTGT+TGG 0.581215 tig0030496:+33273 Msa1443690:CDS
TTCAGATCCTTCATCTGAAG+AGG 0.584122 tig0030496:+33105 Msa1443690:CDS
AAAATGGTTTATGTAAGAAG+AGG 0.585452 tig0030496:-32571 None:intergenic
AAAGGACAACCCTCTTCGAC+CGG 0.587220 tig0030496:+33385 Msa1443690:CDS
AAATTAAAACTCAATAACCA+GGG 0.590216 tig0030496:-34345 None:intergenic
GCAGCTACACCGGTCGAAGA+GGG 0.597437 tig0030496:-33394 None:intergenic
AATCACATACAACATAAATG+AGG 0.600136 tig0030496:-34461 None:intergenic
TTTCTCTTCAATTCCAACAC+AGG 0.600323 tig0030496:-33286 None:intergenic
CTTGTTCTAAAGAGATAACA+TGG 0.602698 tig0030496:-34561 None:intergenic
AACAGGGGAAATGACAAAAG+TGG 0.604173 tig0030496:+34141 Msa1443690:CDS
ATTGGTAGTAGTATGTGTAG+AGG 0.610237 tig0030496:-34317 None:intergenic
AATGTCACCAGTAACAATGT+TGG 0.610482 tig0030496:+33436 Msa1443690:CDS
GTCCAACAACAAGAGTATGG+TGG 0.618792 tig0030496:+34100 Msa1443690:CDS
GAACAGACAACATCAACAGA+TGG 0.623810 tig0030496:+32914 Msa1443690:CDS
ATTAGCCGCATTAGAACTCA+CGG 0.629576 tig0030496:-33416 None:intergenic
TCGTTAGAACTCGTTACACA+AGG 0.638093 tig0030496:+32697 Msa1443690:CDS
GAAAGGGGTAATAACAGTGA+AGG 0.640994 tig0030496:+34262 Msa1443690:CDS
TTGAAGAGAAATGGAAGTGG+TGG 0.651388 tig0030496:+33298 Msa1443690:CDS
CATTCAATCTCAGATGAAAG+GGG 0.655574 tig0030496:+34247 Msa1443690:CDS
ACTGGTGCATAGATTCCAGA+AGG 0.656305 tig0030496:-34169 None:intergenic
AGCTGCCGTGAGTTCTAATG+CGG 0.671481 tig0030496:+33411 Msa1443690:CDS
TGTAGCAACTTGAGGATGTG+TGG 0.683531 tig0030496:-34194 None:intergenic
GAATTGAAGAGAAATGGAAG+TGG 0.689165 tig0030496:+33295 Msa1443690:CDS
TAGCTTCATCAACAACAACA+GGG 0.693117 tig0030496:+34125 Msa1443690:CDS
AATTAAAACTCAATAACCAG+GGG 0.700665 tig0030496:-34344 None:intergenic
CCAACAACAAGAGTATGGTG+GGG 0.702776 tig0030496:+34102 Msa1443690:CDS
AGCTTCATCAACAACAACAG+GGG 0.709783 tig0030496:+34126 Msa1443690:CDS
CACACCAAAGCAAATCAGAG+AGG 0.720773 tig0030496:+33685 Msa1443690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGTATTTTTTTTTTTATC+TGG + tig0030496:32766-32785 Msa1443690:intron 10.0%
!!! TTGTATTTTTTTTTTTATCT+GGG + tig0030496:32767-32786 Msa1443690:intron 10.0%
!!! AAAATAATTTTGGATTTTTT+TGG + tig0030496:32806-32825 Msa1443690:intron 10.0%
!!! AAAAAAATTGATTTTAATTG+AGG - tig0030496:33966-33985 None:intergenic 10.0%
!!! TTTGTATTTTTTTTTTTATC+TGG + tig0030496:32766-32785 Msa1443690:intron 10.0%
!!! TTGTATTTTTTTTTTTATCT+GGG + tig0030496:32767-32786 Msa1443690:intron 10.0%
!!! AAAATAATTTTGGATTTTTT+TGG + tig0030496:32806-32825 Msa1443690:intron 10.0%
!!! AAAAAAATTGATTTTAATTG+AGG - tig0030496:33966-33985 None:intergenic 10.0%
!! GCATATAAAAAAAACAAAAA+GGG - tig0030496:32733-32752 None:intergenic 15.0%
!! AGCATATAAAAAAAACAAAA+AGG - tig0030496:32734-32753 None:intergenic 15.0%
!! AATAACATTATACAACAAAA+AGG - tig0030496:34440-34459 None:intergenic 15.0%
!! AATTATAGAGTTAAAATACT+CGG + tig0030496:34486-34505 Msa1443690:three_prime_UTR 15.0%
!! GCATATAAAAAAAACAAAAA+GGG - tig0030496:32733-32752 None:intergenic 15.0%
!! AGCATATAAAAAAAACAAAA+AGG - tig0030496:32734-32753 None:intergenic 15.0%
!! AATAACATTATACAACAAAA+AGG - tig0030496:34440-34459 None:intergenic 15.0%
!! AATTATAGAGTTAAAATACT+CGG + tig0030496:34486-34505 Msa1443690:three_prime_UTR 15.0%
!! AAAAGAAAGAAAAAGAATGA+AGG - tig0030496:32420-32439 None:intergenic 20.0%
!! AGTTTATTCCAATTAAGAAA+AGG + tig0030496:32951-32970 Msa1443690:CDS 20.0%
!! GTTTATTCCAATTAAGAAAA+GGG + tig0030496:32952-32971 Msa1443690:CDS 20.0%
!!! TTTACTTTTTGTTAAACTGA+AGG + tig0030496:33183-33202 Msa1443690:intron 20.0%
!!! TTACTTTTTGTTAAACTGAA+GGG + tig0030496:33184-33203 Msa1443690:intron 20.0%
!!! TTTTTCACAAAAACAAAACA+AGG - tig0030496:33237-33256 None:intergenic 20.0%
!!! GTTTTTGTGAAAAATTGTTT+AGG + tig0030496:33243-33262 Msa1443690:intron 20.0%
!! AAATTAAAACTCAATAACCA+GGG - tig0030496:34348-34367 None:intergenic 20.0%
!! AAAATTAAAACTCAATAACC+AGG - tig0030496:34349-34368 None:intergenic 20.0%
!! AAAAGAAAGAAAAAGAATGA+AGG - tig0030496:32420-32439 None:intergenic 20.0%
!! AGTTTATTCCAATTAAGAAA+AGG + tig0030496:32951-32970 Msa1443690:CDS 20.0%
!! GTTTATTCCAATTAAGAAAA+GGG + tig0030496:32952-32971 Msa1443690:CDS 20.0%
!!! TTTACTTTTTGTTAAACTGA+AGG + tig0030496:33183-33202 Msa1443690:intron 20.0%
!!! TTACTTTTTGTTAAACTGAA+GGG + tig0030496:33184-33203 Msa1443690:intron 20.0%
!!! TTTTTCACAAAAACAAAACA+AGG - tig0030496:33237-33256 None:intergenic 20.0%
!!! GTTTTTGTGAAAAATTGTTT+AGG + tig0030496:33243-33262 Msa1443690:intron 20.0%
!! AAATTAAAACTCAATAACCA+GGG - tig0030496:34348-34367 None:intergenic 20.0%
!! AAAATTAAAACTCAATAACC+AGG - tig0030496:34349-34368 None:intergenic 20.0%
! TCTGAAGAAGAATCAAAAAT+TGG - tig0030496:32472-32491 None:intergenic 25.0%
! TATCGATGAAGAAAGAATAT+GGG - tig0030496:32496-32515 None:intergenic 25.0%
! ATATCGATGAAGAAAGAATA+TGG - tig0030496:32497-32516 None:intergenic 25.0%
! AAAATGGTTTATGTAAGAAG+AGG - tig0030496:32574-32593 None:intergenic 25.0%
! ACAACTGAGTATAATTTGAA+TGG + tig0030496:32875-32894 Msa1443690:CDS 25.0%
! ATAATAAGAAGAAATCTGAC+TGG + tig0030496:33059-33078 Msa1443690:CDS 25.0%
! TGTTAACTCTATCTTCTTTA+TGG - tig0030496:33342-33361 None:intergenic 25.0%
! ACAAGTGAATTGTTAAGTAA+AGG + tig0030496:33367-33386 Msa1443690:CDS 25.0%
! AAATTGACAACAAAAGAGTT+GGG - tig0030496:33782-33801 None:intergenic 25.0%
! AAAATTGACAACAAAAGAGT+TGG - tig0030496:33783-33802 None:intergenic 25.0%
! AATTAAAACTCAATAACCAG+GGG - tig0030496:34347-34366 None:intergenic 25.0%
! AATCACATACAACATAAATG+AGG - tig0030496:34464-34483 None:intergenic 25.0%
! TCTGAAGAAGAATCAAAAAT+TGG - tig0030496:32472-32491 None:intergenic 25.0%
! TATCGATGAAGAAAGAATAT+GGG - tig0030496:32496-32515 None:intergenic 25.0%
! ATATCGATGAAGAAAGAATA+TGG - tig0030496:32497-32516 None:intergenic 25.0%
! AAAATGGTTTATGTAAGAAG+AGG - tig0030496:32574-32593 None:intergenic 25.0%
! ACAACTGAGTATAATTTGAA+TGG + tig0030496:32875-32894 Msa1443690:CDS 25.0%
! ATAATAAGAAGAAATCTGAC+TGG + tig0030496:33059-33078 Msa1443690:CDS 25.0%
! TGTTAACTCTATCTTCTTTA+TGG - tig0030496:33342-33361 None:intergenic 25.0%
! ACAAGTGAATTGTTAAGTAA+AGG + tig0030496:33367-33386 Msa1443690:CDS 25.0%
! AAATTGACAACAAAAGAGTT+GGG - tig0030496:33782-33801 None:intergenic 25.0%
! AAAATTGACAACAAAAGAGT+TGG - tig0030496:33783-33802 None:intergenic 25.0%
! AATTAAAACTCAATAACCAG+GGG - tig0030496:34347-34366 None:intergenic 25.0%
! AATCACATACAACATAAATG+AGG - tig0030496:34464-34483 None:intergenic 25.0%
AATGAAGGAGAAACAAAGAA+GGG - tig0030496:32405-32424 None:intergenic 30.0%
! ATAATCGATTCTGAAGAGAA+TGG - tig0030496:32550-32569 None:intergenic 30.0%
!! GGAATAAACTCTTCTAAAAC+AGG - tig0030496:32941-32960 None:intergenic 30.0%
ATTATTACCTCTTCAGATGA+AGG - tig0030496:33115-33134 None:intergenic 30.0%
ACTCTATCTTCTTTATGGAA+TGG - tig0030496:33337-33356 None:intergenic 30.0%
!!! GTTTTTTGCTTCTGTTCTAT+AGG + tig0030496:33659-33678 Msa1443690:intron 30.0%
!!! TTTTGACTTCATCATTTGTG+AGG - tig0030496:33727-33746 None:intergenic 30.0%
CATATCTACAAACCTGTAAA+TGG - tig0030496:33751-33770 None:intergenic 30.0%
GAAATCCTATGCAATTGAAA+GGG - tig0030496:33887-33906 None:intergenic 30.0%
TGAAATCCTATGCAATTGAA+AGG - tig0030496:33888-33907 None:intergenic 30.0%
! CTTTCGTTATTTGTTGAACT+TGG - tig0030496:34031-34050 None:intergenic 30.0%
TTCTTAATTGTAGCAACTTG+AGG - tig0030496:34205-34224 None:intergenic 30.0%
!!! TAAGTCACACCTTTTTTAGA+TGG + tig0030496:34532-34551 Msa1443690:three_prime_UTR 30.0%
TGGTAGTATCCATCTAAAAA+AGG - tig0030496:34544-34563 None:intergenic 30.0%
AATGAAGGAGAAACAAAGAA+GGG - tig0030496:32405-32424 None:intergenic 30.0%
! ATAATCGATTCTGAAGAGAA+TGG - tig0030496:32550-32569 None:intergenic 30.0%
!! GGAATAAACTCTTCTAAAAC+AGG - tig0030496:32941-32960 None:intergenic 30.0%
ATTATTACCTCTTCAGATGA+AGG - tig0030496:33115-33134 None:intergenic 30.0%
ACTCTATCTTCTTTATGGAA+TGG - tig0030496:33337-33356 None:intergenic 30.0%
!!! GTTTTTTGCTTCTGTTCTAT+AGG + tig0030496:33659-33678 Msa1443690:intron 30.0%
!!! TTTTGACTTCATCATTTGTG+AGG - tig0030496:33727-33746 None:intergenic 30.0%
CATATCTACAAACCTGTAAA+TGG - tig0030496:33751-33770 None:intergenic 30.0%
GAAATCCTATGCAATTGAAA+GGG - tig0030496:33887-33906 None:intergenic 30.0%
TGAAATCCTATGCAATTGAA+AGG - tig0030496:33888-33907 None:intergenic 30.0%
! CTTTCGTTATTTGTTGAACT+TGG - tig0030496:34031-34050 None:intergenic 30.0%
TTCTTAATTGTAGCAACTTG+AGG - tig0030496:34205-34224 None:intergenic 30.0%
!!! TAAGTCACACCTTTTTTAGA+TGG + tig0030496:34532-34551 Msa1443690:three_prime_UTR 30.0%
TGGTAGTATCCATCTAAAAA+AGG - tig0030496:34544-34563 None:intergenic 30.0%
GAATGAAGGAGAAACAAAGA+AGG - tig0030496:32406-32425 None:intergenic 35.0%
ACAATGCAGCGTTTCAAAAT+GGG + tig0030496:32601-32620 Msa1443690:exon 35.0%
AACGAAAGAGGAAGTTCTTT+AGG - tig0030496:32682-32701 None:intergenic 35.0%
! GAAGAAGCCCTTTTCTTAAT+TGG - tig0030496:32962-32981 None:intergenic 35.0%
TTTCTCTTCAATTCCAACAC+AGG - tig0030496:33289-33308 None:intergenic 35.0%
GTGTTGGAATTGAAGAGAAA+TGG + tig0030496:33289-33308 Msa1443690:CDS 35.0%
GAATTGAAGAGAAATGGAAG+TGG + tig0030496:33295-33314 Msa1443690:CDS 35.0%
AATGTCACCAGTAACAATGT+TGG + tig0030496:33436-33455 Msa1443690:CDS 35.0%
!! ATTACCTCTCTGATTTGCTT+TGG - tig0030496:33692-33711 None:intergenic 35.0%
AGAGAGGTAATGAATGTTGA+TGG + tig0030496:33701-33720 Msa1443690:CDS 35.0%
TGAAGTCAAAAGCCATTTAC+AGG + tig0030496:33736-33755 Msa1443690:CDS 35.0%
TTAGTCCCTTTCAATTGCAT+AGG + tig0030496:33879-33898 Msa1443690:intron 35.0%
! TCTGTTTTGCACAGAAATAC+CGG + tig0030496:33990-34009 Msa1443690:intron 35.0%
TTTGTCCAACAACAAGAGTA+TGG + tig0030496:34097-34116 Msa1443690:CDS 35.0%
TAGCTTCATCAACAACAACA+GGG + tig0030496:34125-34144 Msa1443690:CDS 35.0%
TTAAGAAACCAGAGTTCAAG+AGG + tig0030496:34218-34237 Msa1443690:CDS 35.0%
AGCATTCAATCTCAGATGAA+AGG + tig0030496:34245-34264 Msa1443690:CDS 35.0%
GCATTCAATCTCAGATGAAA+GGG + tig0030496:34246-34265 Msa1443690:CDS 35.0%
CATTCAATCTCAGATGAAAG+GGG + tig0030496:34247-34266 Msa1443690:CDS 35.0%
! ATTGGTAGTAGTATGTGTAG+AGG - tig0030496:34320-34339 None:intergenic 35.0%
GAATGAAGGAGAAACAAAGA+AGG - tig0030496:32406-32425 None:intergenic 35.0%
ACAATGCAGCGTTTCAAAAT+GGG + tig0030496:32601-32620 Msa1443690:exon 35.0%
AACGAAAGAGGAAGTTCTTT+AGG - tig0030496:32682-32701 None:intergenic 35.0%
! GAAGAAGCCCTTTTCTTAAT+TGG - tig0030496:32962-32981 None:intergenic 35.0%
TTTCTCTTCAATTCCAACAC+AGG - tig0030496:33289-33308 None:intergenic 35.0%
GTGTTGGAATTGAAGAGAAA+TGG + tig0030496:33289-33308 Msa1443690:CDS 35.0%
GAATTGAAGAGAAATGGAAG+TGG + tig0030496:33295-33314 Msa1443690:CDS 35.0%
AATGTCACCAGTAACAATGT+TGG + tig0030496:33436-33455 Msa1443690:CDS 35.0%
!! ATTACCTCTCTGATTTGCTT+TGG - tig0030496:33692-33711 None:intergenic 35.0%
AGAGAGGTAATGAATGTTGA+TGG + tig0030496:33701-33720 Msa1443690:CDS 35.0%
TGAAGTCAAAAGCCATTTAC+AGG + tig0030496:33736-33755 Msa1443690:CDS 35.0%
TTAGTCCCTTTCAATTGCAT+AGG + tig0030496:33879-33898 Msa1443690:intron 35.0%
! TCTGTTTTGCACAGAAATAC+CGG + tig0030496:33990-34009 Msa1443690:intron 35.0%
TTTGTCCAACAACAAGAGTA+TGG + tig0030496:34097-34116 Msa1443690:CDS 35.0%
TAGCTTCATCAACAACAACA+GGG + tig0030496:34125-34144 Msa1443690:CDS 35.0%
TTAAGAAACCAGAGTTCAAG+AGG + tig0030496:34218-34237 Msa1443690:CDS 35.0%
AGCATTCAATCTCAGATGAA+AGG + tig0030496:34245-34264 Msa1443690:CDS 35.0%
GCATTCAATCTCAGATGAAA+GGG + tig0030496:34246-34265 Msa1443690:CDS 35.0%
CATTCAATCTCAGATGAAAG+GGG + tig0030496:34247-34266 Msa1443690:CDS 35.0%
! ATTGGTAGTAGTATGTGTAG+AGG - tig0030496:34320-34339 None:intergenic 35.0%
CTGCATTGTGAAGGCAAAAA+TGG - tig0030496:32590-32609 None:intergenic 40.0%
! TTTGAAACGCTGCATTGTGA+AGG - tig0030496:32599-32618 None:intergenic 40.0%
CACAATGCAGCGTTTCAAAA+TGG + tig0030496:32600-32619 Msa1443690:exon 40.0%
GACGTTCTTGTTCTAATGCT+TGG - tig0030496:32642-32661 None:intergenic 40.0%
! GTAACGAGTTCTAACGAAAG+AGG - tig0030496:32694-32713 None:intergenic 40.0%
TCGTTAGAACTCGTTACACA+AGG + tig0030496:32697-32716 Msa1443690:CDS 40.0%
GAACAGACAACATCAACAGA+TGG + tig0030496:32914-32933 Msa1443690:CDS 40.0%
GGCTTAGATCTGTTCAGTTA+TGG + tig0030496:33080-33099 Msa1443690:CDS 40.0%
TTCAGATCCTTCATCTGAAG+AGG + tig0030496:33105-33124 Msa1443690:CDS 40.0%
TAAGAAAACAGTGCCTGTGT+TGG + tig0030496:33273-33292 Msa1443690:CDS 40.0%
TTGAAGAGAAATGGAAGTGG+TGG + tig0030496:33298-33317 Msa1443690:CDS 40.0%
ATTAGCCGCATTAGAACTCA+CGG - tig0030496:33419-33438 None:intergenic 40.0%
GATGTCTCCAACATTGTTAC+TGG - tig0030496:33446-33465 None:intergenic 40.0%
CATCAAAAGAGACGAGAAAG+AGG + tig0030496:33462-33481 Msa1443690:CDS 40.0%
! TTGGTCTTCTAGTATGCAAC+CGG - tig0030496:34012-34031 None:intergenic 40.0%
ATGTTGCCTACAAGGACAAA+AGG - tig0030496:34076-34095 None:intergenic 40.0%
GGACAAAAATGTTGCCTACA+AGG - tig0030496:34084-34103 None:intergenic 40.0%
! TCCAACAACAAGAGTATGGT+GGG + tig0030496:34101-34120 Msa1443690:CDS 40.0%
GTAGCTTCATCAACAACAAC+AGG + tig0030496:34124-34143 Msa1443690:CDS 40.0%
AGCTTCATCAACAACAACAG+GGG + tig0030496:34126-34145 Msa1443690:CDS 40.0%
AACAGGGGAAATGACAAAAG+TGG + tig0030496:34141-34160 Msa1443690:CDS 40.0%
GAAAGGGGTAATAACAGTGA+AGG + tig0030496:34262-34281 Msa1443690:CDS 40.0%
TGTGTAGAGGATGAAGATGT+AGG - tig0030496:34307-34326 None:intergenic 40.0%
! TCAATAACCAGGGGAAGTAT+TGG - tig0030496:34338-34357 None:intergenic 40.0%
CTGCATTGTGAAGGCAAAAA+TGG - tig0030496:32590-32609 None:intergenic 40.0%
! TTTGAAACGCTGCATTGTGA+AGG - tig0030496:32599-32618 None:intergenic 40.0%
CACAATGCAGCGTTTCAAAA+TGG + tig0030496:32600-32619 Msa1443690:exon 40.0%
GACGTTCTTGTTCTAATGCT+TGG - tig0030496:32642-32661 None:intergenic 40.0%
! GTAACGAGTTCTAACGAAAG+AGG - tig0030496:32694-32713 None:intergenic 40.0%
TCGTTAGAACTCGTTACACA+AGG + tig0030496:32697-32716 Msa1443690:CDS 40.0%
GAACAGACAACATCAACAGA+TGG + tig0030496:32914-32933 Msa1443690:CDS 40.0%
GGCTTAGATCTGTTCAGTTA+TGG + tig0030496:33080-33099 Msa1443690:CDS 40.0%
TTCAGATCCTTCATCTGAAG+AGG + tig0030496:33105-33124 Msa1443690:CDS 40.0%
TAAGAAAACAGTGCCTGTGT+TGG + tig0030496:33273-33292 Msa1443690:CDS 40.0%
TTGAAGAGAAATGGAAGTGG+TGG + tig0030496:33298-33317 Msa1443690:CDS 40.0%
ATTAGCCGCATTAGAACTCA+CGG - tig0030496:33419-33438 None:intergenic 40.0%
GATGTCTCCAACATTGTTAC+TGG - tig0030496:33446-33465 None:intergenic 40.0%
CATCAAAAGAGACGAGAAAG+AGG + tig0030496:33462-33481 Msa1443690:CDS 40.0%
! TTGGTCTTCTAGTATGCAAC+CGG - tig0030496:34012-34031 None:intergenic 40.0%
ATGTTGCCTACAAGGACAAA+AGG - tig0030496:34076-34095 None:intergenic 40.0%
GGACAAAAATGTTGCCTACA+AGG - tig0030496:34084-34103 None:intergenic 40.0%
! TCCAACAACAAGAGTATGGT+GGG + tig0030496:34101-34120 Msa1443690:CDS 40.0%
GTAGCTTCATCAACAACAAC+AGG + tig0030496:34124-34143 Msa1443690:CDS 40.0%
AGCTTCATCAACAACAACAG+GGG + tig0030496:34126-34145 Msa1443690:CDS 40.0%
AACAGGGGAAATGACAAAAG+TGG + tig0030496:34141-34160 Msa1443690:CDS 40.0%
GAAAGGGGTAATAACAGTGA+AGG + tig0030496:34262-34281 Msa1443690:CDS 40.0%
TGTGTAGAGGATGAAGATGT+AGG - tig0030496:34307-34326 None:intergenic 40.0%
! TCAATAACCAGGGGAAGTAT+TGG - tig0030496:34338-34357 None:intergenic 40.0%
! CTGAAGAGAATGGCGTTTTG+TGG - tig0030496:32540-32559 None:intergenic 45.0%
GCTTGTCGACAACAATTGTC+TGG + tig0030496:32848-32867 Msa1443690:CDS 45.0%
AAGAGAAATGGAAGTGGTGG+TGG + tig0030496:33301-33320 Msa1443690:CDS 45.0%
AGGAAAAGAGAAAGCAGCGA+CGG + tig0030496:33482-33501 Msa1443690:CDS 45.0%
GTTGCACAAGCGATTCTTGA+AGG + tig0030496:33519-33538 Msa1443690:CDS 45.0%
!! CTCTCTGATTTGCTTTGGTG+TGG - tig0030496:33687-33706 None:intergenic 45.0%
CACACCAAAGCAAATCAGAG+AGG + tig0030496:33685-33704 Msa1443690:CDS 45.0%
!! AGGTGCTGCTGTTTGTGAAT+TGG - tig0030496:34056-34075 None:intergenic 45.0%
! GTCCAACAACAAGAGTATGG+TGG + tig0030496:34100-34119 Msa1443690:CDS 45.0%
! CCAACAACAAGAGTATGGTG+GGG + tig0030496:34102-34121 Msa1443690:CDS 45.0%
ACAAAAGTGGTTGCACCTTC+TGG + tig0030496:34154-34173 Msa1443690:CDS 45.0%
ACTGGTGCATAGATTCCAGA+AGG - tig0030496:34172-34191 None:intergenic 45.0%
TGTAGCAACTTGAGGATGTG+TGG - tig0030496:34197-34216 None:intergenic 45.0%
TGCTCAAACCTCTTGAACTC+TGG - tig0030496:34229-34248 None:intergenic 45.0%
ACTACTACCAATACTTCCCC+TGG + tig0030496:34328-34347 Msa1443690:CDS 45.0%
! CTGAAGAGAATGGCGTTTTG+TGG - tig0030496:32540-32559 None:intergenic 45.0%
GCTTGTCGACAACAATTGTC+TGG + tig0030496:32848-32867 Msa1443690:CDS 45.0%
AAGAGAAATGGAAGTGGTGG+TGG + tig0030496:33301-33320 Msa1443690:CDS 45.0%
AGGAAAAGAGAAAGCAGCGA+CGG + tig0030496:33482-33501 Msa1443690:CDS 45.0%
GTTGCACAAGCGATTCTTGA+AGG + tig0030496:33519-33538 Msa1443690:CDS 45.0%
!! CTCTCTGATTTGCTTTGGTG+TGG - tig0030496:33687-33706 None:intergenic 45.0%
CACACCAAAGCAAATCAGAG+AGG + tig0030496:33685-33704 Msa1443690:CDS 45.0%
!! AGGTGCTGCTGTTTGTGAAT+TGG - tig0030496:34056-34075 None:intergenic 45.0%
! GTCCAACAACAAGAGTATGG+TGG + tig0030496:34100-34119 Msa1443690:CDS 45.0%
! CCAACAACAAGAGTATGGTG+GGG + tig0030496:34102-34121 Msa1443690:CDS 45.0%
ACAAAAGTGGTTGCACCTTC+TGG + tig0030496:34154-34173 Msa1443690:CDS 45.0%
ACTGGTGCATAGATTCCAGA+AGG - tig0030496:34172-34191 None:intergenic 45.0%
TGTAGCAACTTGAGGATGTG+TGG - tig0030496:34197-34216 None:intergenic 45.0%
TGCTCAAACCTCTTGAACTC+TGG - tig0030496:34229-34248 None:intergenic 45.0%
ACTACTACCAATACTTCCCC+TGG + tig0030496:34328-34347 Msa1443690:CDS 45.0%
!!! TTATTTTTGAAAAATAATTT+TGG + tig0030496:32796-32815 Msa1443690:intron 5.0%
!!! TTATTTTTGAAAAATAATTT+TGG + tig0030496:32796-32815 Msa1443690:intron 5.0%
AGACAGTTCGCGAAGAACTC+GGG - tig0030496:32376-32395 None:intergenic 50.0%
GAGACAGTTCGCGAAGAACT+CGG - tig0030496:32377-32396 None:intergenic 50.0%
TGGAAGCAAGAGAGAGAGTG+GGG - tig0030496:32520-32539 None:intergenic 50.0%
GTGGAAGCAAGAGAGAGAGT+GGG - tig0030496:32521-32540 None:intergenic 50.0%
TGTGGAAGCAAGAGAGAGAG+TGG - tig0030496:32522-32541 None:intergenic 50.0%
AAAGGACAACCCTCTTCGAC+CGG + tig0030496:33385-33404 Msa1443690:CDS 50.0%
! AGCTGCCGTGAGTTCTAATG+CGG + tig0030496:33411-33430 Msa1443690:CDS 50.0%
!! TTGAAGGCGCTTCAGCAACT+TGG + tig0030496:33535-33554 Msa1443690:CDS 50.0%
! GCAGCACCTTTTGTCCTTGT+AGG + tig0030496:34067-34086 Msa1443690:CDS 50.0%
! CCCCACCATACTCTTGTTGT+TGG - tig0030496:34105-34124 None:intergenic 50.0%
ACTTGAGGATGTGTGGCTAC+TGG - tig0030496:34190-34209 None:intergenic 50.0%
AGACAGTTCGCGAAGAACTC+GGG - tig0030496:32376-32395 None:intergenic 50.0%
GAGACAGTTCGCGAAGAACT+CGG - tig0030496:32377-32396 None:intergenic 50.0%
TGGAAGCAAGAGAGAGAGTG+GGG - tig0030496:32520-32539 None:intergenic 50.0%
GTGGAAGCAAGAGAGAGAGT+GGG - tig0030496:32521-32540 None:intergenic 50.0%
TGTGGAAGCAAGAGAGAGAG+TGG - tig0030496:32522-32541 None:intergenic 50.0%
AAAGGACAACCCTCTTCGAC+CGG + tig0030496:33385-33404 Msa1443690:CDS 50.0%
! AGCTGCCGTGAGTTCTAATG+CGG + tig0030496:33411-33430 Msa1443690:CDS 50.0%
!! TTGAAGGCGCTTCAGCAACT+TGG + tig0030496:33535-33554 Msa1443690:CDS 50.0%
! GCAGCACCTTTTGTCCTTGT+AGG + tig0030496:34067-34086 Msa1443690:CDS 50.0%
! CCCCACCATACTCTTGTTGT+TGG - tig0030496:34105-34124 None:intergenic 50.0%
ACTTGAGGATGTGTGGCTAC+TGG - tig0030496:34190-34209 None:intergenic 50.0%
AGAACTCACGGCAGCTACAC+CGG - tig0030496:33407-33426 None:intergenic 55.0%
! AAGGCGCTTCAGCAACTTGG+TGG + tig0030496:33538-33557 Msa1443690:CDS 55.0%
GACAGTTCGCGAAGAACTCG+GGG - tig0030496:32375-32394 None:intergenic 55.0%
AGAACTCACGGCAGCTACAC+CGG - tig0030496:33407-33426 None:intergenic 55.0%
! AAGGCGCTTCAGCAACTTGG+TGG + tig0030496:33538-33557 Msa1443690:CDS 55.0%
GCAGCTACACCGGTCGAAGA+GGG - tig0030496:33397-33416 None:intergenic 60.0%
AGAGAAAGCAGCGACGGTGC+TGG + tig0030496:33488-33507 Msa1443690:CDS 60.0%
GCAGCTACACCGGTCGAAGA+GGG - tig0030496:33397-33416 None:intergenic 60.0%
AGAGAAAGCAGCGACGGTGC+TGG + tig0030496:33488-33507 Msa1443690:CDS 60.0%
GGCAGCTACACCGGTCGAAG+AGG - tig0030496:33398-33417 None:intergenic 65.0%
GGCAGCTACACCGGTCGAAG+AGG - tig0030496:33398-33417 None:intergenic 65.0%
!! GCAGCGACGGTGCTGGTCGC+AGG + tig0030496:33495-33514 Msa1443690:CDS 75.0%
!! GCAGCGACGGTGCTGGTCGC+AGG + tig0030496:33495-33514 Msa1443690:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0030496 gene 32373 34572 32373 ID=Msa1443690;Name=Msa1443690
tig0030496 mRNA 32373 34572 32373 ID=Msa1443690-mRNA-1;Parent=Msa1443690;Name=Msa1443690-mRNA-1;_AED=0.07;_eAED=0.07;_QI=231|1|1|1|1|1|5|215|378
tig0030496 exon 32373 32718 32373 ID=Msa1443690-mRNA-1:exon:14030;Parent=Msa1443690-mRNA-1
tig0030496 exon 32840 33126 32840 ID=Msa1443690-mRNA-1:exon:14031;Parent=Msa1443690-mRNA-1
tig0030496 exon 33265 33568 33265 ID=Msa1443690-mRNA-1:exon:14032;Parent=Msa1443690-mRNA-1
tig0030496 exon 33681 33757 33681 ID=Msa1443690-mRNA-1:exon:14033;Parent=Msa1443690-mRNA-1
tig0030496 exon 34004 34572 34004 ID=Msa1443690-mRNA-1:exon:14034;Parent=Msa1443690-mRNA-1
tig0030496 five_prime_UTR 32373 32603 32373 ID=Msa1443690-mRNA-1:five_prime_utr;Parent=Msa1443690-mRNA-1
tig0030496 CDS 32604 32718 32604 ID=Msa1443690-mRNA-1:cds;Parent=Msa1443690-mRNA-1
tig0030496 CDS 32840 33126 32840 ID=Msa1443690-mRNA-1:cds;Parent=Msa1443690-mRNA-1
tig0030496 CDS 33265 33568 33265 ID=Msa1443690-mRNA-1:cds;Parent=Msa1443690-mRNA-1
tig0030496 CDS 33681 33757 33681 ID=Msa1443690-mRNA-1:cds;Parent=Msa1443690-mRNA-1
tig0030496 CDS 34004 34357 34004 ID=Msa1443690-mRNA-1:cds;Parent=Msa1443690-mRNA-1
tig0030496 three_prime_UTR 34358 34572 34358 ID=Msa1443690-mRNA-1:three_prime_utr;Parent=Msa1443690-mRNA-1
Gene Sequence

>Msa1443690

ATGCAGCGTTTCAAAATGGGTTTCTCTGATTATATCCAAGCATTAGAACAAGAACGTCGTAAGATTCAAGTCTTTCCTAAAGAACTTCCTCTTTCGTTAGAACTCGTTACACAAGCTATTGAAGCTTGTCGACAACAATTGTCTGGAACAACAACTGAGTATAATTTGAATGGACAATCTGAGTGTTCTGAACAGACAACATCAACAGATGGACCTGTTTTAGAAGAGTTTATTCCAATTAAGAAAAGGGCTTCTTCTTATTCTCAAGAAGTGTTTGATGATGTAGAAGATTATGATCAACATTTTCATCATAAGCAACAAAAACTTTCATTAGATAATAAGAAGAAATCTGACTGGCTTAGATCTGTTCAGTTATGGAATTCAGATCCTTCATCTGAAGAGGATGTTACTAAGAAAACAGTGCCTGTGTTGGAATTGAAGAGAAATGGAAGTGGTGGTGGTGCTTTTCATCCATTCCATAAAGAAGATAGAGTTAACAACAAGACAAGTGAATTGTTAAGTAAAGGACAACCCTCTTCGACCGGTGTAGCTGCCGTGAGTTCTAATGCGGCTAATGTCACCAGTAACAATGTTGGAGACATCAAAAGAGACGAGAAAGAGGAAAAGAGAAAGCAGCGACGGTGCTGGTCGCAGGAGTTGCACAAGCGATTCTTGAAGGCGCTTCAGCAACTTGGTGGTGCAGATTGTGCCACACCAAAGCAAATCAGAGAGGTAATGAATGTTGATGGCCTCACAAATGATGAAGTCAAAAGCCATTTACAGAAATACCGGTTGCATACTAGAAGACCAAGTTCAACAAATAACGAAAGTGCCAATTCACAAACAGCAGCACCTTTTGTCCTTGTAGGCAACATTTTTGTCCAACAACAAGAGTATGGTGGGGTAGCTTCATCAACAACAACAGGGGAAATGACAAAAGTGGTTGCACCTTCTGGAATCTATGCACCAGTAGCCACACATCCTCAAGTTGCTACAATTAAGAAACCAGAGTTCAAGAGGTTTGAGCATTCAATCTCAGATGAAAGGGGTAATAACAGTGAAGGTGCTGTTCATTCAAATTCACCTACATCTTCATCCTCTACACATACTACTACCAATACTTCCCCTGGTTATTGA
Protein sequence

>Msa1443690

MQRFKMGFSDYIQALEQERRKIQVFPKELPLSLELVTQAIEACRQQLSGTTTEYNLNGQSECSEQTTSTDGPVLEEFIPIKKRASSYSQEVFDDVEDYDQHFHHKQQKLSLDNKKKSDWLRSVQLWNSDPSSEEDVTKKTVPVLELKRNGSGGGAFHPFHKEDRVNNKTSELLSKGQPSSTGVAAVSSNAANVTSNNVGDIKRDEKEEKRKQRRCWSQELHKRFLKALQQLGGADCATPKQIREVMNVDGLTNDEVKSHLQKYRLHTRRPSSTNNESANSQTAAPFVLVGNIFVQQQEYGGVASSTTTGEMTKVVAPSGIYAPVATHPQVATIKKPEFKRFEHSISDERGNNSEGAVHSNSPTSSSSTHTTTNTSPGY*