AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1448810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1448810 MtrunA17_Chr5g0400311 96.232 637 16 2 1 637 1 629 0.0 1256
Msa1448810 MtrunA17_Chr4g0054951 65.055 641 142 11 1 633 1 567 0.0 794
Msa1448810 MtrunA17_Chr4g0054941 61.381 637 167 12 5 633 2 567 0.0 734
Msa1448810 MtrunA17_Chr6g0466801 40.615 650 319 13 1 621 1 612 1.66e-147 441
Msa1448810 MtrunA17_Chr1g0201271 39.514 658 316 16 6 628 11 621 2.19e-138 418
Msa1448810 MtrunA17_Chr7g0260081 49.640 278 130 2 363 637 283 553 2.51e-85 277
Msa1448810 MtrunA17_Chr7g0260081 35.789 190 105 3 7 195 8 181 2.11e-29 123
Msa1448810 MtrunA17_Chr1g0205121 49.823 283 130 4 355 634 303 576 2.42e-84 276
Msa1448810 MtrunA17_Chr1g0205121 34.021 194 112 5 1 194 1 178 1.72e-26 114
Msa1448810 MtrunA17_Chr5g0394901 48.432 287 136 4 351 634 338 615 1.25e-83 275
Msa1448810 MtrunA17_Chr5g0394901 46.226 106 55 1 89 194 77 180 1.64e-23 105
Msa1448810 MtrunA17_Chr1g0185281 49.084 273 129 2 365 634 285 550 3.65e-81 266
Msa1448810 MtrunA17_Chr1g0185281 38.342 193 91 5 7 193 7 177 3.58e-31 128
Msa1448810 MtrunA17_Chr7g0263111 48.507 268 115 3 367 624 170 424 3.32e-79 258
Msa1448810 MtrunA17_Chr7g0263111 34.091 176 97 5 13 185 11 170 4.70e-25 108
Msa1448810 MtrunA17_Chr8g0355021 45.946 296 130 7 331 618 201 474 6.61e-78 256
Msa1448810 MtrunA17_Chr8g0355021 50.667 75 37 0 108 182 64 138 1.72e-16 82.8
Msa1448810 MtrunA17_Chr8g0382571 41.456 316 167 5 320 630 170 472 7.96e-75 248
Msa1448810 MtrunA17_Chr8g0382571 52.778 72 34 0 104 175 37 108 1.16e-18 89.4
Msa1448810 MtrunA17_Chr8g0375751 43.607 305 162 3 318 619 95 392 1.16e-72 240
Msa1448810 MtrunA17_Chr8g0375751 45.882 85 45 1 93 176 47 131 3.35e-16 81.3
Msa1448810 MtrunA17_Chr1g0165011 51.046 239 107 2 371 606 180 411 2.25e-72 240
Msa1448810 MtrunA17_Chr1g0165011 30.636 173 80 4 7 178 4 137 5.24e-16 80.9
Msa1448810 MtrunA17_Chr6g0452181 46.947 262 124 7 352 606 148 401 1.13e-71 238
Msa1448810 MtrunA17_Chr6g0452181 44.156 77 41 1 101 175 51 127 1.88e-15 79.3
Msa1448810 MtrunA17_Chr6g0479511 44.726 237 123 2 371 606 155 384 1.47e-68 228
Msa1448810 MtrunA17_Chr6g0479511 32.800 125 81 2 86 209 28 150 4.65e-15 77.4
Msa1448810 MtrunA17_Chr1g0189231 31.655 278 142 10 368 608 608 874 2.28e-29 124
Msa1448810 MtrunA17_Chr1g0154491 27.931 290 176 13 331 606 65 335 7.91e-19 88.2
Msa1448810 MtrunA17_Chr6g0488541 33.721 172 95 5 459 614 785 953 1.44e-16 84.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1448810 AT4G18010.1 55.075 670 231 13 1 627 1 643 0.0 669
Msa1448810 AT4G18010.2 53.289 608 216 12 1 567 1 581 0.0 579
Msa1448810 AT1G34120.2 40.794 554 255 11 84 619 83 581 8.85e-134 405
Msa1448810 AT1G34120.1 38.057 628 294 14 10 619 27 577 4.29e-133 403
Msa1448810 AT1G34120.3 40.794 554 254 12 84 619 83 580 6.42e-132 400
Msa1448810 AT2G32010.2 35.737 638 323 15 17 634 17 587 1.10e-115 358
Msa1448810 AT2G32010.1 35.737 638 323 15 17 634 17 587 1.10e-115 358
Msa1448810 AT2G32010.4 35.737 638 323 15 17 634 17 587 1.10e-115 358
Msa1448810 AT2G32010.3 35.737 638 323 15 17 634 17 587 1.10e-115 358
Msa1448810 AT1G34120.5 55.118 254 103 3 368 619 182 426 1.80e-95 300
Msa1448810 AT1G71710.2 40.751 373 164 6 253 621 324 643 3.69e-85 280
Msa1448810 AT1G71710.2 40.465 215 97 3 1 193 1 206 1.09e-39 155
Msa1448810 AT1G71710.1 40.751 373 164 6 253 621 333 652 4.82e-85 280
Msa1448810 AT1G71710.1 40.465 215 97 3 1 193 10 215 1.54e-39 154
Msa1448810 AT1G05470.2 46.996 283 139 3 355 634 336 610 5.31e-83 273
Msa1448810 AT1G05470.2 32.990 194 116 2 1 194 1 180 6.43e-30 125
Msa1448810 AT1G05470.1 46.996 283 139 3 355 634 336 610 5.31e-83 273
Msa1448810 AT1G05470.1 32.990 194 116 2 1 194 1 180 6.43e-30 125
Msa1448810 AT3G63240.2 50.182 275 127 3 363 634 273 540 5.42e-82 269
Msa1448810 AT3G63240.2 35.545 211 108 4 7 214 7 192 7.59e-29 121
Msa1448810 AT3G63240.1 50.182 275 127 3 363 634 273 540 5.42e-82 269
Msa1448810 AT3G63240.1 35.545 211 108 4 7 214 7 192 7.59e-29 121
Msa1448810 AT1G34120.4 33.591 518 251 13 10 509 27 469 6.14e-81 264
Msa1448810 AT2G37440.2 50.000 276 126 4 332 606 79 343 1.61e-80 260
Msa1448810 AT2G37440.2 39.815 108 39 2 110 191 3 110 5.79e-17 84.0
Msa1448810 AT2G37440.1 52.569 253 111 3 355 606 180 424 1.65e-79 260
Msa1448810 AT2G37440.1 32.418 182 100 4 8 188 6 165 3.83e-24 106
Msa1448810 AT2G37440.3 52.569 253 111 3 355 606 180 424 1.65e-79 260
Msa1448810 AT2G37440.3 32.418 182 100 4 8 188 6 165 3.83e-24 106
Msa1448810 AT5G04980.4 46.875 256 125 3 359 610 148 396 6.87e-77 251
Msa1448810 AT5G65090.2 50.000 256 116 3 356 606 185 433 1.18e-76 252
Msa1448810 AT5G65090.2 51.316 76 37 0 104 179 8 83 2.09e-19 92.0
Msa1448810 AT5G04980.1 47.244 254 123 3 359 608 183 429 3.11e-76 250
Msa1448810 AT5G04980.1 46.269 67 36 0 104 170 7 73 1.27e-13 73.9
Msa1448810 AT5G04980.3 47.244 254 123 3 359 608 183 429 3.11e-76 250
Msa1448810 AT5G04980.3 46.269 67 36 0 104 170 7 73 1.27e-13 73.9
Msa1448810 AT2G01900.1 44.172 326 164 5 305 620 81 398 4.10e-76 249
Msa1448810 AT2G01900.1 46.667 75 39 1 107 180 59 133 1.48e-14 76.6
Msa1448810 AT5G04980.2 47.244 254 123 3 359 608 212 458 4.11e-76 251
Msa1448810 AT5G04980.2 46.269 67 36 0 104 170 36 102 1.18e-13 74.3
Msa1448810 AT2G01900.3 44.172 326 164 5 305 620 89 406 5.51e-76 249
Msa1448810 AT2G01900.3 46.667 75 39 1 107 180 67 141 1.45e-14 76.6
Msa1448810 AT5G65090.3 50.000 256 116 3 356 606 248 496 5.54e-76 252
Msa1448810 AT5G65090.3 51.316 76 37 0 104 179 71 146 3.20e-19 92.0
Msa1448810 AT5G65090.1 50.000 256 116 3 356 606 248 496 5.54e-76 252
Msa1448810 AT5G65090.1 51.316 76 37 0 104 179 71 146 3.20e-19 92.0
Msa1448810 AT2G01900.2 43.252 326 158 6 305 620 81 389 6.18e-72 238
Msa1448810 AT2G01900.2 46.667 75 39 1 107 180 59 133 1.44e-14 76.6
Msa1448810 AT1G05630.2 31.615 291 146 9 368 616 652 931 1.23e-32 135
Msa1448810 AT1G05630.3 34.335 233 115 6 368 573 652 873 2.45e-32 134
Msa1448810 AT2G43900.2 30.241 291 149 9 366 614 656 934 4.72e-31 130
Msa1448810 AT2G43900.1 30.241 291 149 9 366 614 656 934 4.87e-31 130
Msa1448810 AT2G31830.1 31.317 281 146 9 368 617 661 925 4.97e-31 130
Msa1448810 AT2G31830.2 31.317 281 146 9 368 617 661 925 6.20e-31 130
Msa1448810 AT1G65580.1 29.310 290 150 8 368 614 619 896 9.16e-31 129
Msa1448810 AT1G65580.2 29.310 290 150 8 368 614 353 630 9.35e-31 129
Msa1448810 AT2G31830.3 33.047 233 118 6 368 573 661 882 4.63e-30 127
Msa1448810 AT1G05630.1 28.308 325 146 9 368 616 652 965 3.13e-28 121
Msa1448810 AT1G47510.4 30.693 202 111 8 404 598 84 263 6.66e-18 84.7
Msa1448810 AT1G47510.1 30.693 202 111 8 404 598 146 325 2.28e-17 84.3
Msa1448810 AT1G47510.2 36.134 119 64 4 487 598 149 262 1.10e-12 69.3

Find 122 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATGATTGCTTCCCATTTC+TGG 0.077647 tig0032336:-17864 None:intergenic
TCATCACTAATTTGCATTCT+TGG 0.178641 tig0032336:-17026 None:intergenic
CCTGTTGGAGTTGGTCTTAT+GGG 0.192645 tig0032336:+18573 Msa1448810:CDS
ACCTGTTGGAGTTGGTCTTA+TGG 0.206704 tig0032336:+18572 Msa1448810:CDS
GAACAATTATTATTCAATTT+TGG 0.217826 tig0032336:+20396 Msa1448810:three_prime_UTR
GTTTGTTCTCATCTGACTTC+TGG 0.253654 tig0032336:+18977 Msa1448810:CDS
TTACATGTGAGGAAAGTTTA+TGG 0.253967 tig0032336:+18108 Msa1448810:CDS
TGAGTCCCTTGTGTTCTAAA+TGG 0.278238 tig0032336:-17053 None:intergenic
AGATTCGGAGGTTCGGAAAT+TGG 0.279202 tig0032336:+19261 Msa1448810:CDS
GCATCATAGTTCCGGAGATT+TGG 0.281629 tig0032336:+18299 Msa1448810:CDS
AGTCAAAGAATATATGTTAT+AGG 0.291569 tig0032336:+20336 Msa1448810:three_prime_UTR
AATGAGAATGCTTTCATATA+CGG 0.299985 tig0032336:+18243 Msa1448810:CDS
CATCATAGTTCCGGAGATTT+GGG 0.307084 tig0032336:+18300 Msa1448810:CDS
TCTTGTGCCTCACAGTTTCC+AGG 0.330792 tig0032336:+17786 Msa1448810:intron
GTAAATATCACTTGGTTCTT+CGG 0.331532 tig0032336:-17488 None:intergenic
CATTCAGTGGAACTACTTCC+TGG 0.351079 tig0032336:-17804 None:intergenic
TCTAACGAATCAACTACTTT+AGG 0.360222 tig0032336:-18351 None:intergenic
TTTATGGTATTGATCTTGAT+TGG 0.371531 tig0032336:+18124 Msa1448810:CDS
GAAAGTAACATAATTAGTAT+AGG 0.373450 tig0032336:+18078 Msa1448810:CDS
TTAAGTAGTTCAGCTAGAAT+TGG 0.375907 tig0032336:+18210 Msa1448810:CDS
ATATTCTCAACTCAAATATC+AGG 0.376314 tig0032336:+17080 Msa1448810:CDS
TGGGAATCTATGTATCTGTT+TGG 0.377949 tig0032336:+18505 Msa1448810:CDS
ACCAAGAAAATTGAACTAAC+TGG 0.385102 tig0032336:-20082 None:intergenic
ATTTGCATTCTTGGTTGCTT+AGG 0.387840 tig0032336:-17017 None:intergenic
TTATTATATGACTATCTCAT+TGG 0.388551 tig0032336:-20298 None:intergenic
TCAGGGTAGCAATTGGATCT+TGG 0.401753 tig0032336:+17410 Msa1448810:intron
TGAGTCAGTTACGTTACATA+AGG 0.402055 tig0032336:+20270 Msa1448810:three_prime_UTR
AAACGTTCGCATCATAGTTC+CGG 0.406803 tig0032336:+18291 Msa1448810:CDS
CCATCATCATCTTGGTTCTC+AGG 0.407822 tig0032336:-18426 None:intergenic
ATAATACACCTATCCAGAAA+TGG 0.408581 tig0032336:+17851 Msa1448810:CDS
AAAGTAACATAATTAGTATA+GGG 0.408748 tig0032336:+18079 Msa1448810:CDS
CGTGTTGGGCATGTATTTGA+TGG 0.413909 tig0032336:+19791 Msa1448810:CDS
GAGTCAGTTACGTTACATAA+GGG 0.416582 tig0032336:+20271 Msa1448810:three_prime_UTR
CGCTTAATCCATCATCATCT+TGG 0.418248 tig0032336:-18434 None:intergenic
CATTGCGTCTAACGGACGTT+CGG 0.419351 tig0032336:-18148 None:intergenic
ATTGGATCTTGGAATGTTGC+TGG 0.427032 tig0032336:+17421 Msa1448810:CDS
TTAATTTCATATTTGTAAGT+TGG 0.431471 tig0032336:-19842 None:intergenic
TCACTAAAATCATTCACCTT+AGG 0.436230 tig0032336:-16850 None:intergenic
CCCATAAGACCAACTCCAAC+AGG 0.442442 tig0032336:-18573 None:intergenic
AGTTGGTCTTATGGGCTACA+TGG 0.444671 tig0032336:+18581 Msa1448810:CDS
CCTTCATTGTTTCAAGTCAA+AGG 0.449963 tig0032336:-16683 None:intergenic
GACACATTTCTCAATGATGC+AGG 0.450438 tig0032336:+18907 Msa1448810:intron
CGAATATTGTGGCTAGGAAA+AGG 0.450823 tig0032336:+20007 Msa1448810:CDS
ATTAATTCAGATAGATATGT+TGG 0.451212 tig0032336:+19860 Msa1448810:CDS
GGGAATCTATGTATCTGTTT+GGG 0.451736 tig0032336:+18506 Msa1448810:CDS
CTGAATGCTGGAAATGTACT+AGG 0.452408 tig0032336:+17820 Msa1448810:CDS
TTCATATACGGTGGTGGTGG+TGG 0.453504 tig0032336:+18255 Msa1448810:CDS
TAAGCAATGAATTGCGTGTT+GGG 0.453778 tig0032336:+19777 Msa1448810:CDS
TCGAATCAGTATGTTAGATT+CGG 0.454114 tig0032336:+19246 Msa1448810:CDS
ATATACGGTGGTGGTGGTGG+TGG 0.456749 tig0032336:+18258 Msa1448810:CDS
GTATTTGATGGATGGAAAGA+AGG 0.466341 tig0032336:+19803 Msa1448810:CDS
ATTGCTTCCCATTTCTGGAT+AGG 0.468019 tig0032336:-17859 None:intergenic
CCACAGCGCGCCACCTTCGC+CGG 0.468038 tig0032336:+17933 Msa1448810:CDS
TCATCTGACTTCTGGTACAA+AGG 0.470086 tig0032336:+18985 Msa1448810:CDS
GTATGTTAGATTCGGAGGTT+CGG 0.473895 tig0032336:+19254 Msa1448810:CDS
AAAGTTTCACCTGTTGGAGT+TGG 0.475998 tig0032336:+18564 Msa1448810:CDS
ATTGCGTCTAACGGACGTTC+GGG 0.483185 tig0032336:-18147 None:intergenic
TCATCATTAAGTATATCAAT+TGG 0.487047 tig0032336:-18012 None:intergenic
TCGAATTATCAGCAAGCAAA+TGG 0.488062 tig0032336:+18482 Msa1448810:CDS
AATTTGAAAGTTTCACCTGT+TGG 0.489228 tig0032336:+18558 Msa1448810:CDS
TAATACACCTATCCAGAAAT+GGG 0.489685 tig0032336:+17852 Msa1448810:CDS
TGAACTAATGAATTATGATC+AGG 0.491564 tig0032336:+19303 Msa1448810:CDS
CCTTTGACTTGAAACAATGA+AGG 0.495124 tig0032336:+16683 Msa1448810:exon
ATTGCAATTAATTACCATGC+AGG 0.498674 tig0032336:-19917 None:intergenic
TTGGTGAGATTCCAAAAGAA+GGG 0.500872 tig0032336:+19879 Msa1448810:CDS
ATTTGTGACATTGCGTCTAA+CGG 0.506290 tig0032336:-18156 None:intergenic
CAATAACGAGCCCAAATCTC+CGG 0.506916 tig0032336:-18310 None:intergenic
CTGACTTCTGGTACAAAGGA+TGG 0.510046 tig0032336:+18989 Msa1448810:CDS
TGCTCAGTATATAAATACTA+AGG 0.510156 tig0032336:+17276 Msa1448810:CDS
GAAGTAGTTCCACTGAATGC+TGG 0.510491 tig0032336:+17808 Msa1448810:CDS
CCGGCGAAGGTGGCGCGCTG+TGG 0.516401 tig0032336:-17933 None:intergenic
ATGGCTTAATATTAAGCCTA+AGG 0.517224 tig0032336:+16834 Msa1448810:CDS
CCTGAGAACCAAGATGATGA+TGG 0.520345 tig0032336:+18426 Msa1448810:CDS
GTTGGTGAGATTCCAAAAGA+AGG 0.521146 tig0032336:+19878 Msa1448810:CDS
TATACTTAATGATGAGCTCA+TGG 0.525585 tig0032336:+18020 Msa1448810:CDS
CTAAGCAATGAATTGCGTGT+TGG 0.528172 tig0032336:+19776 Msa1448810:CDS
AGGATCTTGATATTGATGAC+TGG 0.535310 tig0032336:+17458 Msa1448810:CDS
CTTAATACTCTCCGCAACTT+CGG 0.537866 tig0032336:-18192 None:intergenic
AATAAAGCTCACTCGTGCGA+TGG 0.543502 tig0032336:-19103 None:intergenic
ATAAAGCTCACTCGTGCGAT+GGG 0.545204 tig0032336:-19102 None:intergenic
GTTCTCAACACCGGCGAAGG+TGG 0.554746 tig0032336:-17943 None:intergenic
TTTGAATGATGATGATGAGA+TGG 0.559090 tig0032336:-16499 None:intergenic
ATGTATCTGTTTGGGTGCAG+AGG 0.559123 tig0032336:+18514 Msa1448810:CDS
GCTTTCATATACGGTGGTGG+TGG 0.567761 tig0032336:+18252 Msa1448810:CDS
TTGGGCATGTATTTGATGGA+TGG 0.569025 tig0032336:+19795 Msa1448810:CDS
AATCAGTATGTTAGATTCGG+AGG 0.570836 tig0032336:+19249 Msa1448810:CDS
TTGATTCAAATCCGAAGTTG+CGG 0.571082 tig0032336:+18181 Msa1448810:CDS
AGTCAGTTACGTTACATAAG+GGG 0.575484 tig0032336:+20272 Msa1448810:three_prime_UTR
GAAGTTCTCAACACCGGCGA+AGG 0.576277 tig0032336:-17946 None:intergenic
GAAACAATGAAGGGAAGAAG+AGG 0.580298 tig0032336:+16693 Msa1448810:exon
TATCTGTTTGGGTGCAGAGG+AGG 0.583884 tig0032336:+18517 Msa1448810:CDS
AATTATCAGCAAGCAAATGG+TGG 0.587320 tig0032336:+18485 Msa1448810:CDS
CTTTGACTTGAAACAATGAA+GGG 0.589740 tig0032336:+16684 Msa1448810:exon
AGTACATTTCCAGCATTCAG+TGG 0.590823 tig0032336:-17817 None:intergenic
GTTGGTCTTATGGGCTACAT+GGG 0.595449 tig0032336:+18582 Msa1448810:CDS
TATTTGATGGATGGAAAGAA+GGG 0.598578 tig0032336:+19804 Msa1448810:CDS
ATCTGAGATGTTATCTGATG+AGG 0.598698 tig0032336:+18380 Msa1448810:CDS
TGTGATCGAATATTGTGGCT+AGG 0.603815 tig0032336:+20001 Msa1448810:CDS
ATTATCAGCAAGCAAATGGT+GGG 0.612348 tig0032336:+18486 Msa1448810:CDS
TACAAAACAAGACACAGAAG+AGG 0.617623 tig0032336:+17235 Msa1448810:CDS
TATGGGCTACATGGGAAACA+AGG 0.618111 tig0032336:+18590 Msa1448810:CDS
TCTGAGATGTTATCTGATGA+GGG 0.618464 tig0032336:+18381 Msa1448810:CDS
ACACATTTCTCAATGATGCA+GGG 0.618985 tig0032336:+18908 Msa1448810:CDS
TGGACAATAAACGTCAGGGT+GGG 0.620460 tig0032336:+20456 Msa1448810:three_prime_UTR
TTCGGAGGTTCGGAAATTGG+TGG 0.621782 tig0032336:+19264 Msa1448810:CDS
TCAATATCAAGATCCTCAGA+TGG 0.622649 tig0032336:-17451 None:intergenic
TCACAACCGCAACTTGCACA+AGG 0.628072 tig0032336:-16411 None:intergenic
TGGAAATGTACTAGGAGCAG+AGG 0.643675 tig0032336:+17828 Msa1448810:CDS
GTCAGTTACGTTACATAAGG+GGG 0.646220 tig0032336:+20273 Msa1448810:three_prime_UTR
AATGCTTTCATATACGGTGG+TGG 0.651242 tig0032336:+18249 Msa1448810:CDS
GCAGAAGAAGTTCTCAACAC+CGG 0.655380 tig0032336:-17952 None:intergenic
TGGTGAGATTCCAAAAGAAG+GGG 0.655564 tig0032336:+19880 Msa1448810:CDS
GATAGTCCATTTAGAACACA+AGG 0.664992 tig0032336:+17047 Msa1448810:CDS
GAAACTGAGAGTGAAGATGA+TGG 0.668913 tig0032336:+16889 Msa1448810:CDS
TGCTGGAAGACATCCATCTG+AGG 0.669046 tig0032336:+17438 Msa1448810:CDS
ATATAAATACTAAGGAAGTG+AGG 0.671109 tig0032336:+17284 Msa1448810:CDS
TAGGGAATGATTTACATGTG+AGG 0.672907 tig0032336:+18097 Msa1448810:CDS
GAGAATGCTTTCATATACGG+TGG 0.674781 tig0032336:+18246 Msa1448810:CDS
TTGGACAATAAACGTCAGGG+TGG 0.674838 tig0032336:+20455 Msa1448810:three_prime_UTR
GCGCGACGAAATCACATGCG+AGG 0.683866 tig0032336:+18454 Msa1448810:CDS
GCAGGTGTGATCGAATATTG+TGG 0.699199 tig0032336:+19996 Msa1448810:intron
ATAGTCCATTTAGAACACAA+GGG 0.775380 tig0032336:+17048 Msa1448810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAATTAATTATATAATCT+AGG - tig0032336:19734-19753 None:intergenic 10.0%
!! TTATAAACGTACAAAAAAAT+GGG - tig0032336:16529-16548 None:intergenic 15.0%
!! ATTATAAACGTACAAAAAAA+TGG - tig0032336:16530-16549 None:intergenic 15.0%
!! AAAAAGAAAGAAAAAAAAAG+AGG - tig0032336:16958-16977 None:intergenic 15.0%
!! ATAATGATAAATCATAACTT+TGG + tig0032336:17380-17399 Msa1448810:intron 15.0%
!!! AAATTGTAAATTCTTTTGTT+CGG + tig0032336:17533-17552 Msa1448810:intron 15.0%
!! AAAGTAACATAATTAGTATA+GGG + tig0032336:18079-18098 Msa1448810:CDS 15.0%
!!! CTTTTATTTACATATATGAT+TGG + tig0032336:18876-18895 Msa1448810:intron 15.0%
!! TTAATTTCATATTTGTAAGT+TGG - tig0032336:19845-19864 None:intergenic 15.0%
!! AAGAAAAATTAATTGAACAT+TGG + tig0032336:20216-20235 Msa1448810:three_prime_UTR 15.0%
!!! GAACAATTATTATTCAATTT+TGG + tig0032336:20396-20415 Msa1448810:three_prime_UTR 15.0%
!!! ATTTTGTGTCTTTTTCTATT+TGG + tig0032336:16460-16479 Msa1448810:five_prime_UTR 20.0%
!! AAAGAACAAGTTCTTAAATA+TGG - tig0032336:16611-16630 None:intergenic 20.0%
!!! AAGCAACTGTTTTTTTTATA+AGG + tig0032336:16647-16666 Msa1448810:intron 20.0%
!! ATGATCATTCAAAATAATCA+TGG - tig0032336:16759-16778 None:intergenic 20.0%
!!! TTCTTTCTTTTTCATTGAAA+TGG - tig0032336:17118-17137 None:intergenic 20.0%
!!! TTCAGATGAATCTTTTAAAA+AGG + tig0032336:17210-17229 Msa1448810:intron 20.0%
!!! TCAGATGAATCTTTTAAAAA+GGG + tig0032336:17211-17230 Msa1448810:intron 20.0%
!!! CAAGTGATATTTACATTTTT+GGG + tig0032336:17497-17516 Msa1448810:CDS 20.0%
!!! CCATTTTATTATTCAAGTTT+AGG - tig0032336:17641-17660 None:intergenic 20.0%
!! CCTAAACTTGAATAATAAAA+TGG + tig0032336:17638-17657 Msa1448810:intron 20.0%
!! TCATCATTAAGTATATCAAT+TGG - tig0032336:18015-18034 None:intergenic 20.0%
!! GAAAGTAACATAATTAGTAT+AGG + tig0032336:18078-18097 Msa1448810:CDS 20.0%
!! TTATAGCATAAAATTTGCAA+GGG - tig0032336:19145-19164 None:intergenic 20.0%
!! TTTCCCTTAATATTTAAACT+TGG + tig0032336:19374-19393 Msa1448810:intron 20.0%
!! AGACCAAGTTTAAATATTAA+GGG - tig0032336:19380-19399 None:intergenic 20.0%
!! TCAAGTAAAATAAAAGGTTT+GGG - tig0032336:19437-19456 None:intergenic 20.0%
!! TTCAAGTAAAATAAAAGGTT+TGG - tig0032336:19438-19457 None:intergenic 20.0%
!!! AACCTTTTATTTTACTTGAA+TGG + tig0032336:19438-19457 Msa1448810:intron 20.0%
!!! ACCTTTTATTTTACTTGAAT+GGG + tig0032336:19439-19458 Msa1448810:intron 20.0%
!!! CTTTTATCTTATTATAGGTA+GGG - tig0032336:19503-19522 None:intergenic 20.0%
!!! ACAACCTTTTATCTTATTAT+AGG - tig0032336:19508-19527 None:intergenic 20.0%
!! TCAAATTTACATAGTAAGAA+AGG - tig0032336:19557-19576 None:intergenic 20.0%
!!! TTGATATTTTATTCCTCATA+AGG + tig0032336:19573-19592 Msa1448810:intron 20.0%
!! TAGATAACAAATTATAGATG+TGG - tig0032336:19642-19661 None:intergenic 20.0%
!! ATTAATTCAGATAGATATGT+TGG + tig0032336:19860-19879 Msa1448810:CDS 20.0%
!!! GACTATGAATATTAATTTGT+TGG + tig0032336:19948-19967 Msa1448810:intron 20.0%
!! ATAAAATTATATATGCATGC+AGG + tig0032336:19978-19997 Msa1448810:intron 20.0%
!! TTATTATATGACTATCTCAT+TGG - tig0032336:20301-20320 None:intergenic 20.0%
!! AGTCAAAGAATATATGTTAT+AGG + tig0032336:20336-20355 Msa1448810:three_prime_UTR 20.0%
!! TGTCCAAAAATAAAATAACT+GGG - tig0032336:20442-20461 None:intergenic 20.0%
!! TTGTCCAAAAATAAAATAAC+TGG - tig0032336:20443-20462 None:intergenic 20.0%
!! TTTTCTATTTGGTACTAAAG+AGG + tig0032336:16471-16490 Msa1448810:five_prime_UTR 25.0%
!!! TGCTGATTTGATTTTATTGT+AGG + tig0032336:16783-16802 Msa1448810:intron 25.0%
!! TGATTTTATTGTAGGCTTTT+TGG + tig0032336:16791-16810 Msa1448810:intron 25.0%
! ATATTCTCAACTCAAATATC+AGG + tig0032336:17080-17099 Msa1448810:CDS 25.0%
!!! TCAAATCACAGTTCTAAAAA+TGG - tig0032336:17170-17189 None:intergenic 25.0%
! TGCTCAGTATATAAATACTA+AGG + tig0032336:17276-17295 Msa1448810:CDS 25.0%
! ATATAAATACTAAGGAAGTG+AGG + tig0032336:17284-17303 Msa1448810:CDS 25.0%
! ATGCTATACTATACATAACT+AGG - tig0032336:17322-17341 None:intergenic 25.0%
!!! ATAACTTTGGTTTTTCTTCA+GGG + tig0032336:17393-17412 Msa1448810:intron 25.0%
! CCAAAAATGTAAATATCACT+TGG - tig0032336:17499-17518 None:intergenic 25.0%
!! CCAAGTGATATTTACATTTT+TGG + tig0032336:17496-17515 Msa1448810:CDS 25.0%
! ACTCATAGTTTACTGATAAA+TGG + tig0032336:17560-17579 Msa1448810:intron 25.0%
! CTCATAGTTTACTGATAAAT+GGG + tig0032336:17561-17580 Msa1448810:intron 25.0%
! AAGTTATTTGCAGAAAACTT+TGG - tig0032336:17754-17773 None:intergenic 25.0%
!!! TTTATGGTATTGATCTTGAT+TGG + tig0032336:18124-18143 Msa1448810:CDS 25.0%
! AATGAGAATGCTTTCATATA+CGG + tig0032336:18243-18262 Msa1448810:CDS 25.0%
! GAGATGTTTCACATTAAATT+AGG + tig0032336:18616-18635 Msa1448810:intron 25.0%
! TTCCACATTAATTGTTAACT+AGG + tig0032336:18647-18666 Msa1448810:intron 25.0%
! CTTATAGCATAAAATTTGCA+AGG - tig0032336:19146-19165 None:intergenic 25.0%
! ATAAGTTAACACAAGTTGTT+AGG - tig0032336:19176-19195 None:intergenic 25.0%
! TGAACTAATGAATTATGATC+AGG + tig0032336:19303-19322 Msa1448810:CDS 25.0%
!! AAAGTTATGCATATTTTGCA+AGG - tig0032336:19350-19369 None:intergenic 25.0%
! GAGACCAAGTTTAAATATTA+AGG - tig0032336:19381-19400 None:intergenic 25.0%
! ACCCATTCAAGTAAAATAAA+AGG - tig0032336:19443-19462 None:intergenic 25.0%
!! CCTTTTATCTTATTATAGGT+AGG - tig0032336:19504-19523 None:intergenic 25.0%
! CCTACCTATAATAAGATAAA+AGG + tig0032336:19501-19520 Msa1448810:intron 25.0%
!!! TGTCCCAGTTATTTTATTTT+TGG + tig0032336:20436-20455 Msa1448810:three_prime_UTR 25.0%
! TTTGAATGATGATGATGAGA+TGG - tig0032336:16502-16521 None:intergenic 30.0%
!! CTTTGACTTGAAACAATGAA+GGG + tig0032336:16684-16703 Msa1448810:exon 30.0%
!!! CATTTTTTCATCACAATGGA+AGG - tig0032336:16817-16836 None:intergenic 30.0%
CTTCCATTGTGATGAAAAAA+TGG + tig0032336:16815-16834 Msa1448810:CDS 30.0%
!!! AAGCCATTTTTTCATCACAA+TGG - tig0032336:16821-16840 None:intergenic 30.0%
ATGGCTTAATATTAAGCCTA+AGG + tig0032336:16834-16853 Msa1448810:CDS 30.0%
TCACTAAAATCATTCACCTT+AGG - tig0032336:16853-16872 None:intergenic 30.0%
! TCATCACTAATTTGCATTCT+TGG - tig0032336:17029-17048 None:intergenic 30.0%
! ATAGTCCATTTAGAACACAA+GGG + tig0032336:17048-17067 Msa1448810:CDS 30.0%
!!! CATAACTTTGGTTTTTCTTC+AGG + tig0032336:17392-17411 Msa1448810:intron 30.0%
! GTAAATATCACTTGGTTCTT+CGG - tig0032336:17491-17510 None:intergenic 30.0%
! TCAAGGGTAATTTTGTAAAC+TGG + tig0032336:17593-17612 Msa1448810:intron 30.0%
GAACAAATGATATTTGATCG+CGG - tig0032336:17712-17731 None:intergenic 30.0%
CTGCAAATAACTTTCAATTG+TGG + tig0032336:17761-17780 Msa1448810:intron 30.0%
ATAATACACCTATCCAGAAA+TGG + tig0032336:17851-17870 Msa1448810:CDS 30.0%
TAATACACCTATCCAGAAAT+GGG + tig0032336:17852-17871 Msa1448810:CDS 30.0%
TATACTTAATGATGAGCTCA+TGG + tig0032336:18020-18039 Msa1448810:CDS 30.0%
TTACATGTGAGGAAAGTTTA+TGG + tig0032336:18108-18127 Msa1448810:CDS 30.0%
TTAAGTAGTTCAGCTAGAAT+TGG + tig0032336:18210-18229 Msa1448810:CDS 30.0%
TCTAACGAATCAACTACTTT+AGG - tig0032336:18354-18373 None:intergenic 30.0%
AATTTGAAAGTTTCACCTGT+TGG + tig0032336:18558-18577 Msa1448810:CDS 30.0%
AGCCTAGTTAACAATTAATG+TGG - tig0032336:18652-18671 None:intergenic 30.0%
CAAATCATCATGCTGAATAA+AGG + tig0032336:18753-18772 Msa1448810:intron 30.0%
! TTGTTAACAGTCAGATTTTC+TGG + tig0032336:19206-19225 Msa1448810:intron 30.0%
TCGAATCAGTATGTTAGATT+CGG + tig0032336:19246-19265 Msa1448810:CDS 30.0%
AGTAAAATAAAAGGTTTGGG+TGG - tig0032336:19434-19453 None:intergenic 30.0%
AATAGCAATAGTTCCTTATG+AGG - tig0032336:19589-19608 None:intergenic 30.0%
! TATTTGATGGATGGAAAGAA+GGG + tig0032336:19804-19823 Msa1448810:CDS 30.0%
ATTGCAATTAATTACCATGC+AGG - tig0032336:19920-19939 None:intergenic 30.0%
! ACCAGTTAGTTCAATTTTCT+TGG + tig0032336:20081-20100 Msa1448810:CDS 30.0%
ACCAAGAAAATTGAACTAAC+TGG - tig0032336:20085-20104 None:intergenic 30.0%
AAAAATTGACCATCTTCATC+AGG - tig0032336:20190-20209 None:intergenic 30.0%
!! ATTTTTGGACAATAAACGTC+AGG + tig0032336:20451-20470 Msa1448810:three_prime_UTR 30.0%
! TTTTTGGACAATAAACGTCA+GGG + tig0032336:20452-20471 Msa1448810:three_prime_UTR 30.0%
! CCTTCATTGTTTCAAGTCAA+AGG - tig0032336:16686-16705 None:intergenic 35.0%
!! CCTTTGACTTGAAACAATGA+AGG + tig0032336:16683-16702 Msa1448810:exon 35.0%
AAGAAGAGGAAAAAGATCAG+AGG + tig0032336:16707-16726 Msa1448810:CDS 35.0%
ATTTGCATTCTTGGTTGCTT+AGG - tig0032336:17020-17039 None:intergenic 35.0%
! GATAGTCCATTTAGAACACA+AGG + tig0032336:17047-17066 Msa1448810:CDS 35.0%
TACAAAACAAGACACAGAAG+AGG + tig0032336:17235-17254 Msa1448810:CDS 35.0%
AATACTAAGGAAGTGAGGTA+TGG + tig0032336:17289-17308 Msa1448810:intron 35.0%
! TTTTTCTTCAGGGTAGCAAT+TGG + tig0032336:17403-17422 Msa1448810:intron 35.0%
TCAATATCAAGATCCTCAGA+TGG - tig0032336:17454-17473 None:intergenic 35.0%
! AGGATCTTGATATTGATGAC+TGG + tig0032336:17458-17477 Msa1448810:CDS 35.0%
TTACTGATAAATGGGCAGTA+CGG + tig0032336:17569-17588 Msa1448810:intron 35.0%
TAATGATTGCTTCCCATTTC+TGG - tig0032336:17867-17886 None:intergenic 35.0%
TAGGGAATGATTTACATGTG+AGG + tig0032336:18097-18116 Msa1448810:CDS 35.0%
ATTTGTGACATTGCGTCTAA+CGG - tig0032336:18159-18178 None:intergenic 35.0%
TTGATTCAAATCCGAAGTTG+CGG + tig0032336:18181-18200 Msa1448810:CDS 35.0%
! ATCTGAGATGTTATCTGATG+AGG + tig0032336:18380-18399 Msa1448810:CDS 35.0%
! TCTGAGATGTTATCTGATGA+GGG + tig0032336:18381-18400 Msa1448810:CDS 35.0%
TCGAATTATCAGCAAGCAAA+TGG + tig0032336:18482-18501 Msa1448810:CDS 35.0%
AATTATCAGCAAGCAAATGG+TGG + tig0032336:18485-18504 Msa1448810:CDS 35.0%
ATTATCAGCAAGCAAATGGT+GGG + tig0032336:18486-18505 Msa1448810:CDS 35.0%
TGGGAATCTATGTATCTGTT+TGG + tig0032336:18505-18524 Msa1448810:CDS 35.0%
GGGAATCTATGTATCTGTTT+GGG + tig0032336:18506-18525 Msa1448810:CDS 35.0%
TCATCATGCTGAATAAAGGT+CGG + tig0032336:18757-18776 Msa1448810:intron 35.0%
GTTGAATTGAACTGATACAC+TGG - tig0032336:18793-18812 None:intergenic 35.0%
ACACATTTCTCAATGATGCA+GGG + tig0032336:18908-18927 Msa1448810:CDS 35.0%
!!! AACAGTCAGATTTTCTGGTT+CGG + tig0032336:19211-19230 Msa1448810:intron 35.0%
AATCAGTATGTTAGATTCGG+AGG + tig0032336:19249-19268 Msa1448810:CDS 35.0%
! AATTGGTGGCTCAAAAAAAG+TGG + tig0032336:19278-19297 Msa1448810:CDS 35.0%
! TGCATATTTTGCAAGGTTTG+TGG - tig0032336:19343-19362 None:intergenic 35.0%
!!! TATAGGTAGGGTTTTTTCTG+TGG - tig0032336:19491-19510 None:intergenic 35.0%
TAAGCAATGAATTGCGTGTT+GGG + tig0032336:19777-19796 Msa1448810:CDS 35.0%
! GTATTTGATGGATGGAAAGA+AGG + tig0032336:19803-19822 Msa1448810:CDS 35.0%
TTGGTGAGATTCCAAAAGAA+GGG + tig0032336:19879-19898 Msa1448810:CDS 35.0%
!!! CTTTTTTTCTCCCCTTCTTT+TGG - tig0032336:19893-19912 None:intergenic 35.0%
TCTTCATCAGGAAAAATCTC+AGG - tig0032336:20178-20197 None:intergenic 35.0%
! GAGATTTTTCCTGATGAAGA+TGG + tig0032336:20178-20197 Msa1448810:CDS 35.0%
TGAGTCAGTTACGTTACATA+AGG + tig0032336:20270-20289 Msa1448810:three_prime_UTR 35.0%
GAGTCAGTTACGTTACATAA+GGG + tig0032336:20271-20290 Msa1448810:three_prime_UTR 35.0%
AGTCAGTTACGTTACATAAG+GGG + tig0032336:20272-20291 Msa1448810:three_prime_UTR 35.0%
! TGTTTTCCTTGTGCAAGTTG+CGG + tig0032336:16405-16424 Msa1448810:five_prime_UTR 40.0%
GAAACAATGAAGGGAAGAAG+AGG + tig0032336:16693-16712 Msa1448810:exon 40.0%
GAAACTGAGAGTGAAGATGA+TGG + tig0032336:16889-16908 Msa1448810:CDS 40.0%
! TGAGTCCCTTGTGTTCTAAA+TGG - tig0032336:17056-17075 None:intergenic 40.0%
CTCAACTCAAATATCAGGCA+AGG + tig0032336:17085-17104 Msa1448810:intron 40.0%
ATTGGATCTTGGAATGTTGC+TGG + tig0032336:17421-17440 Msa1448810:CDS 40.0%
!! TACTGAAGCCGTTTTGTAGT+CGG + tig0032336:17661-17680 Msa1448810:intron 40.0%
AGTACATTTCCAGCATTCAG+TGG - tig0032336:17820-17839 None:intergenic 40.0%
CTGAATGCTGGAAATGTACT+AGG + tig0032336:17820-17839 Msa1448810:CDS 40.0%
! ATTGCTTCCCATTTCTGGAT+AGG - tig0032336:17862-17881 None:intergenic 40.0%
CTTAATACTCTCCGCAACTT+CGG - tig0032336:18195-18214 None:intergenic 40.0%
GAGAATGCTTTCATATACGG+TGG + tig0032336:18246-18265 Msa1448810:CDS 40.0%
AATGCTTTCATATACGGTGG+TGG + tig0032336:18249-18268 Msa1448810:CDS 40.0%
AAACGTTCGCATCATAGTTC+CGG + tig0032336:18291-18310 Msa1448810:CDS 40.0%
CATCATAGTTCCGGAGATTT+GGG + tig0032336:18300-18319 Msa1448810:CDS 40.0%
CGCTTAATCCATCATCATCT+TGG - tig0032336:18437-18456 None:intergenic 40.0%
AAAGTTTCACCTGTTGGAGT+TGG + tig0032336:18564-18583 Msa1448810:CDS 40.0%
ATATCACTAGTGCACGAGTT+TGG - tig0032336:18848-18867 None:intergenic 40.0%
GACACATTTCTCAATGATGC+AGG + tig0032336:18907-18926 Msa1448810:intron 40.0%
GTTTGTTCTCATCTGACTTC+TGG + tig0032336:18977-18996 Msa1448810:CDS 40.0%
TCATCTGACTTCTGGTACAA+AGG + tig0032336:18985-19004 Msa1448810:CDS 40.0%
GTATGTTAGATTCGGAGGTT+CGG + tig0032336:19254-19273 Msa1448810:CDS 40.0%
CTAAGCAATGAATTGCGTGT+TGG + tig0032336:19776-19795 Msa1448810:CDS 40.0%
TTGGGCATGTATTTGATGGA+TGG + tig0032336:19795-19814 Msa1448810:CDS 40.0%
! GTTGGTGAGATTCCAAAAGA+AGG + tig0032336:19878-19897 Msa1448810:CDS 40.0%
TGGTGAGATTCCAAAAGAAG+GGG + tig0032336:19880-19899 Msa1448810:CDS 40.0%
AGAAAAAAAGAGCTCCTGCA+TGG + tig0032336:19903-19922 Msa1448810:CDS 40.0%
TGTGATCGAATATTGTGGCT+AGG + tig0032336:20001-20020 Msa1448810:CDS 40.0%
CGAATATTGTGGCTAGGAAA+AGG + tig0032336:20007-20026 Msa1448810:CDS 40.0%
GTCAGTTACGTTACATAAGG+GGG + tig0032336:20273-20292 Msa1448810:three_prime_UTR 40.0%
TCAGGGTAGCAATTGGATCT+TGG + tig0032336:17410-17429 Msa1448810:intron 45.0%
TAAATGGGCAGTACGGTTCA+AGG + tig0032336:17576-17595 Msa1448810:intron 45.0%
AAATGGGCAGTACGGTTCAA+GGG + tig0032336:17577-17596 Msa1448810:intron 45.0%
CTACGTCTCCGACTACAAAA+CGG - tig0032336:17672-17691 None:intergenic 45.0%
ACTACTTCCTGGAAACTGTG+AGG - tig0032336:17796-17815 None:intergenic 45.0%
CATTCAGTGGAACTACTTCC+TGG - tig0032336:17807-17826 None:intergenic 45.0%
GAAGTAGTTCCACTGAATGC+TGG + tig0032336:17808-17827 Msa1448810:CDS 45.0%
TGGAAATGTACTAGGAGCAG+AGG + tig0032336:17828-17847 Msa1448810:CDS 45.0%
!!! TGGCTTTTGTGTTTGCTGTC+AGG - tig0032336:17916-17935 None:intergenic 45.0%
GCAGAAGAAGTTCTCAACAC+CGG - tig0032336:17955-17974 None:intergenic 45.0%
GCATCATAGTTCCGGAGATT+TGG + tig0032336:18299-18318 Msa1448810:CDS 45.0%
CAATAACGAGCCCAAATCTC+CGG - tig0032336:18313-18332 None:intergenic 45.0%
! CCATCATCATCTTGGTTCTC+AGG - tig0032336:18429-18448 None:intergenic 45.0%
CCTGAGAACCAAGATGATGA+TGG + tig0032336:18426-18445 Msa1448810:CDS 45.0%
ATGTATCTGTTTGGGTGCAG+AGG + tig0032336:18514-18533 Msa1448810:CDS 45.0%
!! ACCTGTTGGAGTTGGTCTTA+TGG + tig0032336:18572-18591 Msa1448810:CDS 45.0%
!! CCTGTTGGAGTTGGTCTTAT+GGG + tig0032336:18573-18592 Msa1448810:CDS 45.0%
!! AGTTGGTCTTATGGGCTACA+TGG + tig0032336:18581-18600 Msa1448810:CDS 45.0%
!! GTTGGTCTTATGGGCTACAT+GGG + tig0032336:18582-18601 Msa1448810:CDS 45.0%
! TATGGGCTACATGGGAAACA+AGG + tig0032336:18590-18609 Msa1448810:CDS 45.0%
ACTACTTACCTTTGTCAGCG+AGG + tig0032336:18811-18830 Msa1448810:intron 45.0%
CTGACTTCTGGTACAAAGGA+TGG + tig0032336:18989-19008 Msa1448810:CDS 45.0%
ATAAAGCTCACTCGTGCGAT+GGG - tig0032336:19105-19124 None:intergenic 45.0%
AATAAAGCTCACTCGTGCGA+TGG - tig0032336:19106-19125 None:intergenic 45.0%
AGATTCGGAGGTTCGGAAAT+TGG + tig0032336:19261-19280 Msa1448810:CDS 45.0%
CGTGTTGGGCATGTATTTGA+TGG + tig0032336:19791-19810 Msa1448810:CDS 45.0%
GCAGGTGTGATCGAATATTG+TGG + tig0032336:19996-20015 Msa1448810:intron 45.0%
TTGGACAATAAACGTCAGGG+TGG + tig0032336:20455-20474 Msa1448810:three_prime_UTR 45.0%
TGGACAATAAACGTCAGGGT+GGG + tig0032336:20456-20475 Msa1448810:three_prime_UTR 45.0%
TCACAACCGCAACTTGCACA+AGG - tig0032336:16414-16433 None:intergenic 50.0%
TGCTGGAAGACATCCATCTG+AGG + tig0032336:17438-17457 Msa1448810:CDS 50.0%
! CGTTTTGTAGTCGGAGACGT+AGG + tig0032336:17670-17689 Msa1448810:intron 50.0%
TCTTGTGCCTCACAGTTTCC+AGG + tig0032336:17786-17805 Msa1448810:intron 50.0%
! ATTGCGTCTAACGGACGTTC+GGG - tig0032336:18150-18169 None:intergenic 50.0%
! CATTGCGTCTAACGGACGTT+CGG - tig0032336:18151-18170 None:intergenic 50.0%
! GCTTTCATATACGGTGGTGG+TGG + tig0032336:18252-18271 Msa1448810:CDS 50.0%
!! TTCATATACGGTGGTGGTGG+TGG + tig0032336:18255-18274 Msa1448810:CDS 50.0%
TATCTGTTTGGGTGCAGAGG+AGG + tig0032336:18517-18536 Msa1448810:CDS 50.0%
CCCATAAGACCAACTCCAAC+AGG - tig0032336:18576-18595 None:intergenic 50.0%
CTCTTTAGCCTCGCTGACAA+AGG - tig0032336:18822-18841 None:intergenic 50.0%
CTTTGTCAGCGAGGCTAAAG+AGG + tig0032336:18820-18839 Msa1448810:intron 50.0%
TTCGGAGGTTCGGAAATTGG+TGG + tig0032336:19264-19283 Msa1448810:CDS 50.0%
GAAGTTCTCAACACCGGCGA+AGG - tig0032336:17949-17968 None:intergenic 55.0%
!! ATATACGGTGGTGGTGGTGG+TGG + tig0032336:18258-18277 Msa1448810:CDS 55.0%
GTTCTCAACACCGGCGAAGG+TGG - tig0032336:17946-17965 None:intergenic 60.0%
GCGCGACGAAATCACATGCG+AGG + tig0032336:18454-18473 Msa1448810:CDS 60.0%
!! TACGGTGGTGGTGGTGGTGG+AGG + tig0032336:18261-18280 Msa1448810:CDS 65.0%
!! GGTGGTGGTGGTGGTGGAGG+TGG + tig0032336:18264-18283 Msa1448810:CDS 70.0%
CCACAGCGCGCCACCTTCGC+CGG + tig0032336:17933-17952 Msa1448810:CDS 75.0%
! CCGGCGAAGGTGGCGCGCTG+TGG - tig0032336:17936-17955 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
tig0032336 gene 16403 20538 16403 ID=Msa1448810;Name=Msa1448810
tig0032336 mRNA 16403 20538 16403 ID=Msa1448810-mRNA-1;Parent=Msa1448810;Name=Msa1448810-mRNA-1;_AED=0.08;_eAED=0.08;_QI=164|0.9|0.90|1|0.6|0.63|11|325|637
tig0032336 exon 16403 16536 16403 ID=Msa1448810-mRNA-1:exon:16636;Parent=Msa1448810-mRNA-1
tig0032336 exon 16669 16728 16669 ID=Msa1448810-mRNA-1:exon:16637;Parent=Msa1448810-mRNA-1
tig0032336 exon 16805 16910 16805 ID=Msa1448810-mRNA-1:exon:16638;Parent=Msa1448810-mRNA-1
tig0032336 exon 17009 17101 17009 ID=Msa1448810-mRNA-1:exon:16639;Parent=Msa1448810-mRNA-1
tig0032336 exon 17215 17305 17215 ID=Msa1448810-mRNA-1:exon:16640;Parent=Msa1448810-mRNA-1
tig0032336 exon 17414 17518 17414 ID=Msa1448810-mRNA-1:exon:16641;Parent=Msa1448810-mRNA-1
tig0032336 exon 17801 18611 17801 ID=Msa1448810-mRNA-1:exon:16642;Parent=Msa1448810-mRNA-1
tig0032336 exon 18908 19113 18908 ID=Msa1448810-mRNA-1:exon:16643;Parent=Msa1448810-mRNA-1
tig0032336 exon 19216 19324 19216 ID=Msa1448810-mRNA-1:exon:16644;Parent=Msa1448810-mRNA-1
tig0032336 exon 19776 19924 19776 ID=Msa1448810-mRNA-1:exon:16645;Parent=Msa1448810-mRNA-1
tig0032336 exon 20000 20538 20000 ID=Msa1448810-mRNA-1:exon:16646;Parent=Msa1448810-mRNA-1
tig0032336 five_prime_UTR 16403 16536 16403 ID=Msa1448810-mRNA-1:five_prime_utr;Parent=Msa1448810-mRNA-1
tig0032336 five_prime_UTR 16669 16698 16669 ID=Msa1448810-mRNA-1:five_prime_utr;Parent=Msa1448810-mRNA-1
tig0032336 CDS 16699 16728 16699 ID=Msa1448810-mRNA-1:cds;Parent=Msa1448810-mRNA-1
tig0032336 CDS 16805 16910 16805 ID=Msa1448810-mRNA-1:cds;Parent=Msa1448810-mRNA-1
tig0032336 CDS 17009 17101 17009 ID=Msa1448810-mRNA-1:cds;Parent=Msa1448810-mRNA-1
tig0032336 CDS 17215 17305 17215 ID=Msa1448810-mRNA-1:cds;Parent=Msa1448810-mRNA-1
tig0032336 CDS 17414 17518 17414 ID=Msa1448810-mRNA-1:cds;Parent=Msa1448810-mRNA-1
tig0032336 CDS 17801 18611 17801 ID=Msa1448810-mRNA-1:cds;Parent=Msa1448810-mRNA-1
tig0032336 CDS 18908 19113 18908 ID=Msa1448810-mRNA-1:cds;Parent=Msa1448810-mRNA-1
tig0032336 CDS 19216 19324 19216 ID=Msa1448810-mRNA-1:cds;Parent=Msa1448810-mRNA-1
tig0032336 CDS 19776 19924 19776 ID=Msa1448810-mRNA-1:cds;Parent=Msa1448810-mRNA-1
tig0032336 CDS 20000 20213 20000 ID=Msa1448810-mRNA-1:cds;Parent=Msa1448810-mRNA-1
tig0032336 three_prime_UTR 20214 20538 20214 ID=Msa1448810-mRNA-1:three_prime_utr;Parent=Msa1448810-mRNA-1
Gene Sequence

>Msa1448810

ATGAAGGGAAGAAGAGGAAAAAGATCAGAGGCTTTTTGGCCTTCCATTGTGATGAAAAAATGGCTTAATATTAAGCCTAAGGTGAATGATTTTAGTGAAGATGAAGTTGATACTGAAACTGAGAGTGAAGATGATGTTTGTTCTCCTAAGCAACCAAGAATGCAAATTAGTGATGATAGTCCATTTAGAACACAAGGGACTCAATCTATATTCTCAACTCAAATATCAGATGAATCTTTTAAAAAGGGATACAAAACAAGACACAGAAGAGGAAAATCAGAAACTCTGCGTGCTCAGTATATAAATACTAAGGAAGTGAGGGTAGCAATTGGATCTTGGAATGTTGCTGGAAGACATCCATCTGAGGATCTTGATATTGATGACTGGATTTGTGCCGAAGAACCAAGTGATATTTACATTTTTGGTTTCCAGGAAGTAGTTCCACTGAATGCTGGAAATGTACTAGGAGCAGAGGATAATACACCTATCCAGAAATGGGAAGCAATCATTAGAAGATCTTTGAACAAATCTTCTGAGCCTGACAGCAAACACAAAAGCCACAGCGCGCCACCTTCGCCGGTGTTGAGAACTTCTTCTGCTGCTGATGTTCTAGCTGATAATATAGATGCTGCTAATCCAATTGATATACTTAATGATGAGCTCATGGAAAATGTTGACAAATATGATCTGCAACAGCTTGAAGAAAGTAACATAATTAGTATAGGGAATGATTTACATGTGAGGAAAGTTTATGGTATTGATCTTGATTGGCCCGAACGTCCGTTAGACGCAATGTCACAAATTGTTGATTCAAATCCGAAGTTGCGGAGAGTATTAAGTAGTTCAGCTAGAATTGGCTTTGACTTGAATGAGAATGCTTTCATATACGGTGGTGGTGGTGGTGGAGGTGGATTGAAACGTTCGCATCATAGTTCCGGAGATTTGGGCTCGTTATTGAAAGAGCAACAAGTTATACCTAAAGTAGTTGATTCGTTAGATGATGTATCTGAGATGTTATCTGATGAGGGTGATGATGCTTTTATTGAATTACCTGAGAACCAAGATGATGATGGATTAAGCGCGACGAAATCACATGCGAGGTATGTTCGAATTATCAGCAAGCAAATGGTGGGAATCTATGTATCTGTTTGGGTGCAGAGGAGGCTGAGAAGACACATTAATAATTTGAAAGTTTCACCTGTTGGAGTTGGTCTTATGGGCTACATGGGAAACAAGACACATTTCTCAATGATGCAGGGTTCTGTTTCGATAAGCATGTCACTCTTTCAGTCGCGTATGTGCTTTGTTTGTTCTCATCTGACTTCTGGTACAAAGGATGGAGCTGAACAAAGACGAAACTCAGATGTTAATGAAATTCTACGACGCACTTGCTTCTCGTCTGTCTTTGCTACAGATCAAGCGCTAACAATCCCATCGCACGATCAGATTTTCTGGTTCGGAGATTTGAATTATCGAATCAGTATGTTAGATTCGGAGGTTCGGAAATTGGTGGCTCAAAAAAAGTGGAATGAACTAATGAATTATGATCAGCTAAGCAATGAATTGCGTGTTGGGCATGTATTTGATGGATGGAAAGAAGGGTTGATAAACTTTGCACCAACTTACAAATATGAAATTAATTCAGATAGATATGTTGGTGAGATTCCAAAAGAAGGGGAGAAAAAAAGAGCTCCTGCATGGTGTGATCGAATATTGTGGCTAGGAAAAGGAATAAAACAACTAAAATATGAACGTGCAGAAATTAAGCTCTCAGATCATAGACCAGTTAGTTCAATTTTCTTGGTTGAAGTTGAAGTATTTGATCATCGCAAATTAAGAAGAGCACTAAATTTCACTAATACTGCTGCAGTACATCCTGAGATTTTTCCTGATGAAGATGGTCAATTTTTCTAA
Protein sequence

>Msa1448810

MKGRRGKRSEAFWPSIVMKKWLNIKPKVNDFSEDEVDTETESEDDVCSPKQPRMQISDDSPFRTQGTQSIFSTQISDESFKKGYKTRHRRGKSETLRAQYINTKEVRVAIGSWNVAGRHPSEDLDIDDWICAEEPSDIYIFGFQEVVPLNAGNVLGAEDNTPIQKWEAIIRRSLNKSSEPDSKHKSHSAPPSPVLRTSSAADVLADNIDAANPIDILNDELMENVDKYDLQQLEESNIISIGNDLHVRKVYGIDLDWPERPLDAMSQIVDSNPKLRRVLSSSARIGFDLNENAFIYGGGGGGGGLKRSHHSSGDLGSLLKEQQVIPKVVDSLDDVSEMLSDEGDDAFIELPENQDDDGLSATKSHARYVRIISKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGLMGYMGNKTHFSMMQGSVSISMSLFQSRMCFVCSHLTSGTKDGAEQRRNSDVNEILRRTCFSSVFATDQALTIPSHDQIFWFGDLNYRISMLDSEVRKLVAQKKWNELMNYDQLSNELRVGHVFDGWKEGLINFAPTYKYEINSDRYVGEIPKEGEKKRAPAWCDRILWLGKGIKQLKYERAEIKLSDHRPVSSIFLVEVEVFDHRKLRRALNFTNTAAVHPEIFPDEDGQFF*