Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222980 | XP_013465396.1 | 93.074 | 693 | 43 | 3 | 1 | 689 | 1 | 692 | 0.0 | 1314 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222980 | sp|F4HSD5|TRM32_ARATH | 25.952 | 709 | 343 | 27 | 1 | 687 | 1 | 549 | 8.20e-36 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222980 | A0A072VCX1 | 93.074 | 693 | 43 | 3 | 1 | 689 | 1 | 692 | 0.0 | 1314 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012710 | Msa0222980 | 0.814489 | 1.501151e-51 | -8.615850e-47 |
| Msa0023330 | Msa0222980 | 0.805856 | 1.090544e-49 | -8.615850e-47 |
| Msa0026630 | Msa0222980 | 0.811859 | 5.671012e-51 | -8.615850e-47 |
| Msa0032080 | Msa0222980 | 0.801040 | 1.086199e-48 | -8.615850e-47 |
| Msa0033850 | Msa0222980 | 0.823466 | 1.364626e-53 | -8.615850e-47 |
| Msa0034480 | Msa0222980 | 0.817607 | 3.021307e-52 | -8.615850e-47 |
| Msa0042550 | Msa0222980 | 0.819896 | 9.130344e-53 | -8.615850e-47 |
| Msa0045910 | Msa0222980 | 0.815776 | 7.772269e-52 | -8.615850e-47 |
| Msa0060070 | Msa0222980 | 0.805038 | 1.619055e-49 | -8.615850e-47 |
| Msa0061500 | Msa0222980 | 0.833263 | 5.896983e-56 | -8.615850e-47 |
| Msa0071250 | Msa0222980 | 0.801992 | 6.930093e-49 | -8.615850e-47 |
| Msa0081620 | Msa0222980 | 0.842667 | 2.248050e-58 | -8.615850e-47 |
| Msa0081630 | Msa0222980 | 0.809736 | 1.633163e-50 | -8.615850e-47 |
| Msa0090970 | Msa0222980 | 0.812205 | 4.767191e-51 | -8.615850e-47 |
| Msa0092410 | Msa0222980 | 0.860008 | 2.786897e-63 | -8.615850e-47 |
| Msa0102140 | Msa0222980 | 0.830515 | 2.811757e-55 | -8.615850e-47 |
| Msa0111080 | Msa0222980 | 0.823876 | 1.094058e-53 | -8.615850e-47 |
| Msa0117520 | Msa0222980 | 0.840384 | 8.980724e-58 | -8.615850e-47 |
| Msa0124320 | Msa0222980 | 0.803116 | 4.064021e-49 | -8.615850e-47 |
| Msa0130850 | Msa0222980 | 0.806289 | 8.843067e-50 | -8.615850e-47 |
| Msa0135410 | Msa0222980 | 0.802163 | 6.390205e-49 | -8.615850e-47 |
| Msa0136630 | Msa0222980 | 0.832058 | 1.173534e-55 | -8.615850e-47 |
| Msa0138020 | Msa0222980 | 0.818155 | 2.271886e-52 | -8.615850e-47 |
| Msa0139000 | Msa0222980 | 0.812538 | 4.031353e-51 | -8.615850e-47 |
| Msa0142280 | Msa0222980 | 0.814966 | 1.176757e-51 | -8.615850e-47 |
| Msa0152560 | Msa0222980 | 0.859603 | 3.689995e-63 | -8.615850e-47 |
| Msa0154920 | Msa0222980 | 0.801846 | 7.425998e-49 | -8.615850e-47 |
| Msa0160960 | Msa0222980 | 0.830001 | 3.754764e-55 | -8.615850e-47 |
| Msa0172080 | Msa0222980 | 0.806162 | 9.405795e-50 | -8.615850e-47 |
| Msa0173960 | Msa0222980 | 0.829840 | 4.109464e-55 | -8.615850e-47 |
| Msa0178510 | Msa0222980 | 0.818154 | 2.273286e-52 | -8.615850e-47 |
| Msa0183450 | Msa0222980 | 0.811608 | 6.430181e-51 | -8.615850e-47 |
| Msa0186320 | Msa0222980 | 0.843572 | 1.290171e-58 | -8.615850e-47 |
| Msa0186950 | Msa0222980 | 0.817737 | 2.823029e-52 | -8.615850e-47 |
| Msa0187310 | Msa0222980 | 0.815557 | 8.699522e-52 | -8.615850e-47 |
| Msa0187830 | Msa0222980 | 0.843595 | 1.271912e-58 | -8.615850e-47 |
| Msa0189610 | Msa0222980 | 0.819423 | 1.170829e-52 | -8.615850e-47 |
| Msa0190530 | Msa0222980 | 0.820857 | 5.495411e-53 | -8.615850e-47 |
| Msa0197610 | Msa0222980 | 0.818756 | 1.659916e-52 | -8.615850e-47 |
| Msa0201570 | Msa0222980 | 0.807628 | 4.605735e-50 | -8.615850e-47 |
| Msa0204840 | Msa0222980 | 0.810096 | 1.366149e-50 | -8.615850e-47 |
| Msa0218370 | Msa0222980 | 0.816036 | 6.800123e-52 | -8.615850e-47 |
| Msa0218460 | Msa0222980 | 0.830824 | 2.362543e-55 | -8.615850e-47 |
| Msa0220750 | Msa0222980 | 0.828145 | 1.057594e-54 | -8.615850e-47 |
| Msa0222870 | Msa0222980 | 0.902457 | 9.509304e-79 | -8.615850e-47 |
| Msa0222980 | Msa0227360 | 0.812668 | 3.776398e-51 | -8.615850e-47 |
| Msa0222980 | Msa0231240 | 0.803175 | 3.952199e-49 | -8.615850e-47 |
| Msa0222980 | Msa0235880 | 0.800500 | 1.400200e-48 | -8.615850e-47 |
| Msa0222980 | Msa0236420 | 0.813674 | 2.271775e-51 | -8.615850e-47 |
| Msa0222980 | Msa0240270 | 0.856465 | 3.159415e-62 | -8.615850e-47 |
| Msa0222980 | Msa0244140 | 0.808015 | 3.811209e-50 | -8.615850e-47 |
| Msa0222980 | Msa0244190 | 0.819736 | 9.930364e-53 | -8.615850e-47 |
| Msa0222980 | Msa0264310 | 0.964773 | 9.459073e-124 | -8.615850e-47 |
| Msa0222980 | Msa0269560 | 0.864357 | 1.288578e-64 | -8.615850e-47 |
| Msa0222980 | Msa0270960 | 0.812452 | 4.208919e-51 | -8.615850e-47 |
| Msa0222980 | Msa0271550 | 0.834114 | 3.613352e-56 | -8.615850e-47 |
| Msa0222980 | Msa0282720 | 0.825839 | 3.765454e-54 | -8.615850e-47 |
| Msa0222980 | Msa0284450 | 0.823832 | 1.120367e-53 | -8.615850e-47 |
| Msa0222980 | Msa0299660 | 0.819736 | 9.929384e-53 | -8.615850e-47 |
| Msa0222980 | Msa0302840 | 0.822171 | 2.731424e-53 | -8.615850e-47 |
| Msa0222980 | Msa0307310 | 0.807036 | 6.148381e-50 | -8.615850e-47 |
| Msa0222980 | Msa0308560 | 0.802365 | 5.808088e-49 | -8.615850e-47 |
| Msa0222980 | Msa0311470 | 0.806857 | 6.710236e-50 | -8.615850e-47 |
| Msa0222980 | Msa0319290 | 0.827211 | 1.772742e-54 | -8.615850e-47 |
| Msa0222980 | Msa0321080 | 0.815425 | 9.306947e-52 | -8.615850e-47 |
| Msa0222980 | Msa0322680 | 0.819563 | 1.087581e-52 | -8.615850e-47 |
| Msa0222980 | Msa0347750 | 0.803789 | 2.947319e-49 | -8.615850e-47 |
| Msa0222980 | Msa0347950 | 0.807947 | 3.940422e-50 | -8.615850e-47 |
| Msa0222980 | Msa0364790 | 0.842773 | 2.106436e-58 | -8.615850e-47 |
| Msa0222980 | Msa0371950 | 0.837468 | 5.105457e-57 | -8.615850e-47 |
| Msa0222980 | Msa0380600 | 0.806971 | 6.346959e-50 | -8.615850e-47 |
| Msa0222980 | Msa0386010 | 0.843845 | 1.090748e-58 | -8.615850e-47 |
| Msa0222980 | Msa0388730 | 0.804386 | 2.214974e-49 | -8.615850e-47 |
| Msa0222980 | Msa0389910 | 0.811681 | 6.199452e-51 | -8.615850e-47 |
| Msa0222980 | Msa0397250 | 0.812667 | 3.778198e-51 | -8.615850e-47 |
| Msa0222980 | Msa0397270 | 0.820352 | 7.176640e-53 | -8.615850e-47 |
| Msa0222980 | Msa0403490 | 0.854766 | 9.890753e-62 | -8.615850e-47 |
| Msa0222980 | Msa0408340 | 0.806839 | 6.768922e-50 | -8.615850e-47 |
| Msa0222980 | Msa0414140 | 0.826855 | 2.157060e-54 | -8.615850e-47 |
| Msa0222980 | Msa0422180 | 0.847927 | 8.480170e-60 | -8.615850e-47 |
| Msa0222980 | Msa0430240 | 0.804643 | 1.957715e-49 | -8.615850e-47 |
| Msa0222980 | Msa0448610 | 0.803293 | 3.735740e-49 | -8.615850e-47 |
| Msa0222980 | Msa0455760 | 0.819096 | 1.389745e-52 | -8.615850e-47 |
| Msa0222980 | Msa0456770 | 0.810318 | 1.223195e-50 | -8.615850e-47 |
| Msa0222980 | Msa0457990 | 0.944275 | 2.628089e-103 | -8.615850e-47 |
| Msa0222980 | Msa0470880 | 0.803629 | 3.182314e-49 | -8.615850e-47 |
| Msa0222980 | Msa0485490 | 0.801261 | 9.788057e-49 | -8.615850e-47 |
| Msa0222980 | Msa0496970 | 0.806976 | 6.330832e-50 | -8.615850e-47 |
| Msa0222980 | Msa0514610 | 0.800348 | 1.503507e-48 | -8.615850e-47 |
| Msa0222980 | Msa0518170 | 0.804244 | 2.370733e-49 | -8.615850e-47 |
| Msa0222980 | Msa0525610 | 0.828865 | 7.090174e-55 | -8.615850e-47 |
| Msa0222980 | Msa0545050 | 0.807685 | 4.480481e-50 | -8.615850e-47 |
| Msa0222980 | Msa0557410 | 0.827064 | 1.922731e-54 | -8.615850e-47 |
| Msa0222980 | Msa0566350 | 0.834517 | 2.862813e-56 | -8.615850e-47 |
| Msa0222980 | Msa0566750 | 0.844949 | 5.507248e-59 | -8.615850e-47 |
| Msa0222980 | Msa0573890 | 0.814785 | 1.291034e-51 | -8.615850e-47 |
| Msa0222980 | Msa0574940 | 0.805629 | 1.217059e-49 | -8.615850e-47 |
| Msa0222980 | Msa0581400 | 0.814392 | 1.577078e-51 | -8.615850e-47 |
| Msa0222980 | Msa0624060 | 0.800529 | 1.380886e-48 | -8.615850e-47 |
| Msa0222980 | Msa0641130 | 0.804283 | 2.326906e-49 | -8.615850e-47 |
| Msa0222980 | Msa0661720 | 0.834144 | 3.551162e-56 | -8.615850e-47 |
| Msa0222980 | Msa0667740 | 0.819737 | 9.927553e-53 | -8.615850e-47 |
| Msa0222980 | Msa0673120 | 0.822919 | 1.830668e-53 | -8.615850e-47 |
| Msa0222980 | Msa0692650 | 0.806351 | 8.581461e-50 | -8.615850e-47 |
| Msa0222980 | Msa0698440 | 0.803255 | 3.803249e-49 | -8.615850e-47 |
| Msa0222980 | Msa0705990 | 0.822722 | 2.034510e-53 | -8.615850e-47 |
| Msa0222980 | Msa0708310 | 0.802409 | 5.686586e-49 | -8.615850e-47 |
| Msa0222980 | Msa0713380 | 0.837864 | 4.041689e-57 | -8.615850e-47 |
| Msa0222980 | Msa0714990 | 0.818322 | 2.082647e-52 | -8.615850e-47 |
| Msa0222980 | Msa0721340 | 0.835662 | 1.472535e-56 | -8.615850e-47 |
| Msa0222980 | Msa0727720 | 0.807281 | 5.456109e-50 | -8.615850e-47 |
| Msa0222980 | Msa0741070 | 0.806642 | 7.448854e-50 | -8.615850e-47 |
| Msa0222980 | Msa0750810 | 0.804985 | 1.660943e-49 | -8.615850e-47 |
| Msa0222980 | Msa0757020 | 0.802754 | 4.828179e-49 | -8.615850e-47 |
| Msa0222980 | Msa0763890 | 0.801357 | 9.356198e-49 | -8.615850e-47 |
| Msa0222980 | Msa0763920 | 0.817945 | 2.534760e-52 | -8.615850e-47 |
| Msa0222980 | Msa0773590 | 0.805448 | 1.328753e-49 | -8.615850e-47 |
| Msa0222980 | Msa0786070 | 0.801244 | 9.864555e-49 | -8.615850e-47 |
| Msa0222980 | Msa0794210 | 0.807391 | 5.171304e-50 | -8.615850e-47 |
| Msa0222980 | Msa0795340 | 0.828865 | 7.090044e-55 | -8.615850e-47 |
| Msa0222980 | Msa0797770 | 0.812966 | 3.248688e-51 | -8.615850e-47 |
| Msa0222980 | Msa0805920 | 0.802023 | 6.828266e-49 | -8.615850e-47 |
| Msa0222980 | Msa0808100 | 0.816730 | 4.757335e-52 | -8.615850e-47 |
| Msa0222980 | Msa0809140 | 0.800727 | 1.258287e-48 | -8.615850e-47 |
| Msa0222980 | Msa0811040 | 0.801165 | 1.024120e-48 | -8.615850e-47 |
| Msa0222980 | Msa0812950 | 0.836837 | 7.403393e-57 | -8.615850e-47 |
| Msa0222980 | Msa0828200 | 0.803213 | 3.880510e-49 | -8.615850e-47 |
| Msa0222980 | Msa0829830 | 0.802825 | 4.668290e-49 | -8.615850e-47 |
| Msa0222980 | Msa0835230 | 0.819646 | 1.041090e-52 | -8.615850e-47 |
| Msa0222980 | Msa0836650 | 0.831378 | 1.727005e-55 | -8.615850e-47 |
| Msa0222980 | Msa0844110 | 0.815762 | 7.830273e-52 | -8.615850e-47 |
| Msa0222980 | Msa0862280 | 0.825456 | 4.642496e-54 | -8.615850e-47 |
| Msa0222980 | Msa0863720 | 0.819741 | 9.906189e-53 | -8.615850e-47 |
| Msa0222980 | Msa0894710 | 0.821414 | 4.089322e-53 | -8.615850e-47 |
| Msa0222980 | Msa0898320 | 0.808984 | 2.367274e-50 | -8.615850e-47 |
| Msa0222980 | Msa0902830 | 0.826539 | 2.566634e-54 | -8.615850e-47 |
| Msa0222980 | Msa0921420 | 0.820679 | 6.037280e-53 | -8.615850e-47 |
| Msa0222980 | Msa0936390 | 0.811636 | 6.341825e-51 | -8.615850e-47 |
| Msa0222980 | Msa0960390 | 0.841355 | 4.995502e-58 | -8.615850e-47 |
| Msa0222980 | Msa0972810 | 0.846175 | 2.561988e-59 | -8.615850e-47 |
| Msa0222980 | Msa0981040 | 0.832469 | 9.286951e-56 | -8.615850e-47 |
| Msa0222980 | Msa0992600 | 0.806199 | 9.237873e-50 | -8.615850e-47 |
| Msa0222980 | Msa0994910 | 0.846199 | 2.523180e-59 | -8.615850e-47 |
| Msa0222980 | Msa1008750 | 0.804407 | 2.192996e-49 | -8.615850e-47 |
| Msa0222980 | Msa1023310 | 0.801816 | 7.531731e-49 | -8.615850e-47 |
| Msa0222980 | Msa1024680 | 0.830759 | 2.451129e-55 | -8.615850e-47 |
| Msa0222980 | Msa1029620 | 0.811321 | 7.422572e-51 | -8.615850e-47 |
| Msa0222980 | Msa1043120 | 0.818088 | 2.352885e-52 | -8.615850e-47 |
| Msa0222980 | Msa1063360 | 0.806594 | 7.624157e-50 | -8.615850e-47 |
| Msa0222980 | Msa1063400 | 0.844960 | 5.467682e-59 | -8.615850e-47 |
| Msa0222980 | Msa1063420 | 0.836323 | 1.000927e-56 | -8.615850e-47 |
| Msa0222980 | Msa1068480 | 0.818376 | 2.024294e-52 | -8.615850e-47 |
| Msa0222980 | Msa1077340 | 0.808506 | 2.995763e-50 | -8.615850e-47 |
| Msa0222980 | Msa1087990 | 0.804829 | 1.790040e-49 | -8.615850e-47 |
| Msa0222980 | Msa1093480 | 0.800449 | 1.433691e-48 | -8.615850e-47 |
| Msa0222980 | Msa1096060 | 0.815419 | 9.337018e-52 | -8.615850e-47 |
| Msa0222980 | Msa1107260 | 0.822563 | 2.215106e-53 | -8.615850e-47 |
| Msa0222980 | Msa1108710 | 0.808383 | 3.182569e-50 | -8.615850e-47 |
| Msa0222980 | Msa1115280 | 0.811065 | 8.433625e-51 | -8.615850e-47 |
| Msa0222980 | Msa1122150 | 0.812160 | 4.876439e-51 | -8.615850e-47 |
| Msa0222980 | Msa1126240 | 0.808680 | 2.749501e-50 | -8.615850e-47 |
| Msa0222980 | Msa1137780 | 0.805832 | 1.103246e-49 | -8.615850e-47 |
| Msa0222980 | Msa1138280 | 0.806134 | 9.534233e-50 | -8.615850e-47 |
| Msa0222980 | Msa1143020 | 0.847736 | 9.575219e-60 | -8.615850e-47 |
| Msa0222980 | Msa1150900 | 0.810978 | 8.811161e-51 | -8.615850e-47 |
| Msa0222980 | Msa1158390 | 0.800211 | 1.603350e-48 | -8.615850e-47 |
| Msa0222980 | Msa1160560 | 0.817212 | 3.708276e-52 | -8.615850e-47 |
| Msa0222980 | Msa1162060 | 0.811214 | 7.829086e-51 | -8.615850e-47 |
| Msa0222980 | Msa1171140 | 0.815322 | 9.812427e-52 | -8.615850e-47 |
| Msa0222980 | Msa1173490 | 0.839785 | 1.287440e-57 | -8.615850e-47 |
| Msa0222980 | Msa1185460 | 0.807688 | 4.473017e-50 | -8.615850e-47 |
| Msa0222980 | Msa1200250 | 0.827806 | 1.276317e-54 | -8.615850e-47 |
| Msa0222980 | Msa1207310 | 0.808036 | 3.772652e-50 | -8.615850e-47 |
| Msa0222980 | Msa1209190 | 0.840833 | 6.854051e-58 | -8.615850e-47 |
| Msa0222980 | Msa1209860 | 0.834877 | 2.324596e-56 | -8.615850e-47 |
| Msa0222980 | Msa1212050 | 0.811358 | 7.285189e-51 | -8.615850e-47 |
| Msa0222980 | Msa1214170 | 0.858453 | 8.155544e-63 | -8.615850e-47 |
| Msa0222980 | Msa1221330 | 0.834191 | 3.456861e-56 | -8.615850e-47 |
| Msa0222980 | Msa1225200 | 0.810661 | 1.031440e-50 | -8.615850e-47 |
| Msa0222980 | Msa1225600 | 0.811707 | 6.117865e-51 | -8.615850e-47 |
| Msa0222980 | Msa1235390 | 0.824534 | 7.664225e-54 | -8.615850e-47 |
| Msa0222980 | Msa1236440 | 0.841066 | 5.951535e-58 | -8.615850e-47 |
| Msa0222980 | Msa1239400 | 0.802370 | 5.795027e-49 | -8.615850e-47 |
| Msa0222980 | Msa1260680 | 0.825332 | 4.967221e-54 | -8.615850e-47 |
| Msa0222980 | Msa1270660 | 0.824011 | 1.017033e-53 | -8.615850e-47 |
| Msa0222980 | Msa1270730 | 0.824491 | 7.843983e-54 | -8.615850e-47 |
| Msa0222980 | Msa1272010 | 0.809963 | 1.459128e-50 | -8.615850e-47 |
| Msa0222980 | Msa1275510 | 0.818053 | 2.395839e-52 | -8.615850e-47 |
| Msa0222980 | Msa1277670 | 0.834325 | 3.199010e-56 | -8.615850e-47 |
| Msa0222980 | Msa1279480 | 0.847050 | 1.477445e-59 | -8.615850e-47 |
| Msa0222980 | Msa1291450 | 0.821980 | 3.025865e-53 | -8.615850e-47 |
| Msa0222980 | Msa1332050 | 0.837494 | 5.030277e-57 | -8.615850e-47 |
| Msa0222980 | Msa1335230 | 0.843974 | 1.007438e-58 | -8.615850e-47 |
| Msa0222980 | Msa1338400 | 0.838248 | 3.218934e-57 | -8.615850e-47 |
| Msa0222980 | Msa1343250 | 0.803626 | 3.186559e-49 | -8.615850e-47 |
| Msa0222980 | Msa1349450 | 0.830810 | 2.380506e-55 | -8.615850e-47 |
| Msa0222980 | Msa1355890 | 0.818781 | 1.638933e-52 | -8.615850e-47 |
| Msa0222980 | Msa1360020 | 0.860953 | 1.441026e-63 | -8.615850e-47 |
| Msa0222980 | Msa1369920 | -0.812857 | 3.433350e-51 | -8.615850e-47 |
| Msa0222980 | Msa1372150 | 0.823142 | 1.623995e-53 | -8.615850e-47 |
| Msa0222980 | Msa1378410 | 0.801813 | 7.541871e-49 | -8.615850e-47 |
| Msa0222980 | Msa1378680 | 0.816834 | 4.508740e-52 | -8.615850e-47 |
| Msa0222980 | Msa1400930 | 0.814451 | 1.530745e-51 | -8.615850e-47 |
| Msa0222980 | Msa1401460 | 0.804037 | 2.618155e-49 | -8.615850e-47 |
| Msa0222980 | Msa1408340 | 0.800133 | 1.662873e-48 | -8.615850e-47 |
| Msa0222980 | Msa1419840 | 0.811641 | 6.323853e-51 | -8.615850e-47 |
| Msa0222980 | Msa1420270 | 0.805835 | 1.101816e-49 | -8.615850e-47 |
| Msa0222980 | Msa1423820 | 0.846114 | 2.660922e-59 | -8.615850e-47 |
| Msa0222980 | Msa1424630 | 0.834742 | 2.514367e-56 | -8.615850e-47 |
| Msa0222980 | Msa1425260 | 0.800177 | 1.628685e-48 | -8.615850e-47 |
| Msa0222980 | Msa1426710 | 0.818717 | 1.694371e-52 | -8.615850e-47 |
| Msa0222980 | Msa1428780 | 0.804833 | 1.786584e-49 | -8.615850e-47 |
| Msa0222980 | Msa1430130 | 0.835809 | 1.351797e-56 | -8.615850e-47 |
| Msa0222980 | Msa1430550 | 0.857501 | 1.563528e-62 | -8.615850e-47 |
| Msa0222980 | Msa1442790 | 0.818534 | 1.864345e-52 | -8.615850e-47 |
| Msa0222980 | Msa1448810 | 0.800724 | 1.260299e-48 | -8.615850e-47 |
| Msa0222980 | Msa1457160 | 0.817258 | 3.619933e-52 | -8.615850e-47 |
| Msa0222980 | Msa1460750 | 0.836107 | 1.135543e-56 | -8.615850e-47 |
| Msa0222980 | Msa1462360 | 0.829658 | 4.550839e-55 | -8.615850e-47 |
| Msa0222980 | Msa1465210 | 0.816604 | 5.077028e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222980 | MtrunA17_Chr2g0328111 | 93.074 | 693 | 43 | 3 | 1 | 689 | 1 | 692 | 0.0 | 1314 |
| Msa0222980 | MtrunA17_Chr1g0169831 | 40.361 | 166 | 98 | 1 | 525 | 689 | 708 | 873 | 1.01e-34 | 141 |
| Msa0222980 | MtrunA17_Chr4g0010021 | 34.637 | 179 | 97 | 4 | 510 | 688 | 390 | 548 | 1.19e-24 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0222980 | AT5G02390.1 | 32.112 | 464 | 249 | 17 | 247 | 679 | 396 | 824 | 1.44e-50 | 189 |
| Msa0222980 | AT5G02390.3 | 32.112 | 464 | 249 | 17 | 247 | 679 | 396 | 824 | 1.44e-50 | 189 |
| Msa0222980 | AT1G07620.2 | 26.554 | 708 | 366 | 27 | 1 | 687 | 1 | 575 | 4.59e-39 | 152 |
| Msa0222980 | AT1G07620.4 | 25.952 | 709 | 343 | 27 | 1 | 687 | 1 | 549 | 8.34e-37 | 145 |
| Msa0222980 | AT1G07620.3 | 25.952 | 709 | 343 | 27 | 1 | 687 | 1 | 549 | 8.34e-37 | 145 |
| Msa0222980 | AT1G07620.1 | 25.952 | 709 | 343 | 27 | 1 | 687 | 1 | 549 | 8.34e-37 | 145 |
| Msa0222980 | AT5G02390.2 | 28.723 | 376 | 203 | 16 | 247 | 592 | 396 | 736 | 7.52e-22 | 101 |
Find 110 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTTTGACATATTTGAAAT+TGG | 0.199181 | 2_1:+72402602 | None:intergenic |
| ATGTTGATTAATTTGTAAAT+AGG | 0.210912 | 2_1:-72401998 | Msa0222980:three_prime_UTR |
| ACCTTGGAAGGCGCGGTTAA+AGG | 0.224919 | 2_1:+72403904 | None:intergenic |
| GGTCTAAGCAAACCGAAATT+TGG | 0.233160 | 2_1:-72403855 | Msa0222980:CDS |
| AGTGATTTATCAATCTTTAA+AGG | 0.241353 | 2_1:+72403118 | None:intergenic |
| CAGAAATTGATTATTTGTTA+TGG | 0.249750 | 2_1:-72404803 | Msa0222980:exon |
| ACTATCTTGTTAAAGAAGTA+TGG | 0.258917 | 2_1:-72402305 | Msa0222980:CDS |
| TTGTCTTGACAGCTAATTTC+AGG | 0.275591 | 2_1:+72402968 | None:intergenic |
| TTCTTCTAAAGCTGTGAATA+AGG | 0.278916 | 2_1:+72402503 | None:intergenic |
| AGAAATTGATTATTTGTTAT+GGG | 0.298961 | 2_1:-72404802 | Msa0222980:exon |
| TAGTTGAATGCAAAGGGTTT+TGG | 0.302998 | 2_1:+72402354 | None:intergenic |
| AATTGAAATGTCTCTGTTAA+GGG | 0.304642 | 2_1:+72404074 | None:intergenic |
| TAGAGTTGCTTAAAGAGTTT+TGG | 0.309502 | 2_1:-72401954 | None:intergenic |
| GGTCTACCGTGTATCGCATT+TGG | 0.311231 | 2_1:+72402541 | None:intergenic |
| TTAACAAGATAGTTCCCTTT+AGG | 0.319585 | 2_1:+72402315 | None:intergenic |
| CTTGGGAAAGTGCCAAATTT+CGG | 0.322890 | 2_1:+72403843 | None:intergenic |
| TAATTGAAATGTCTCTGTTA+AGG | 0.329455 | 2_1:+72404073 | None:intergenic |
| TTATGAAACGCCGAAGCTTT+CGG | 0.334227 | 2_1:-72403752 | Msa0222980:CDS |
| TATTCTTGATTATCATCGTT+GGG | 0.343497 | 2_1:-72404701 | Msa0222980:CDS |
| AAGCTTTCGGCGAGCGATCT+TGG | 0.344645 | 2_1:-72403739 | Msa0222980:CDS |
| GTCTACCGTGTATCGCATTT+GGG | 0.345633 | 2_1:+72402542 | None:intergenic |
| CCACTTGATTCCATCCTTTG+TGG | 0.349946 | 2_1:+72403650 | None:intergenic |
| TAGGCTAGCTTCATGTTTGT+TGG | 0.375152 | 2_1:+72403432 | None:intergenic |
| AAAGCGAAATTGACAAAATC+AGG | 0.380909 | 2_1:-72403934 | Msa0222980:CDS |
| AACTCAAACCAATGCCTAAA+GGG | 0.384062 | 2_1:-72402329 | Msa0222980:CDS |
| GTGAATAAGGAAGGTTTCAT+TGG | 0.396105 | 2_1:+72402516 | None:intergenic |
| GAGATGATGTTCTTCGCATT+AGG | 0.406169 | 2_1:+72403413 | None:intergenic |
| ATGCCTAATCTTGAGTCCTT+AGG | 0.420369 | 2_1:-72403232 | Msa0222980:CDS |
| AAATTCTCTTCTCATGATGT+TGG | 0.451920 | 2_1:-72402116 | Msa0222980:exon |
| AGATCGCTCGCCGAAAGCTT+CGG | 0.452317 | 2_1:+72403742 | None:intergenic |
| ATCATCGTTGGGGTGTCAAA+AGG | 0.453879 | 2_1:-72404690 | Msa0222980:CDS |
| AGATAGTTCCCTTTAGGCAT+TGG | 0.454693 | 2_1:+72402321 | None:intergenic |
| AATATCAAATGCTAAAGGTC+AGG | 0.458115 | 2_1:-72404154 | Msa0222980:CDS |
| GAATCTTTAAACAACCTTGA+GGG | 0.459728 | 2_1:+72404292 | None:intergenic |
| ATATTCTTGATTATCATCGT+TGG | 0.463067 | 2_1:-72404702 | Msa0222980:CDS |
| CGAAATTTGGCACTTTCCCA+AGG | 0.470153 | 2_1:-72403842 | Msa0222980:CDS |
| CAGACATTAGATGATGTTGT+TGG | 0.474147 | 2_1:-72402240 | Msa0222980:CDS |
| AATCCTAAGGACTCAAGATT+AGG | 0.474891 | 2_1:+72403229 | None:intergenic |
| AGATCTCTTTCTCGTTATTG+TGG | 0.476200 | 2_1:+72403536 | None:intergenic |
| ATAAGGAAGGTTTCATTGGC+TGG | 0.476766 | 2_1:+72402520 | None:intergenic |
| TCCTAGTTCTTTATCTGCTG+TGG | 0.479016 | 2_1:-72403035 | Msa0222980:CDS |
| GTCAATTTCGCTTTGTTGTG+AGG | 0.479415 | 2_1:+72403943 | None:intergenic |
| AAAGTTGCTAGCTGGAACTC+AGG | 0.480623 | 2_1:-72403815 | Msa0222980:CDS |
| AGTTTGTAGTTGAATGCAAA+GGG | 0.481518 | 2_1:+72402348 | None:intergenic |
| GAAGGCTTTGAAGAAATACT+TGG | 0.482916 | 2_1:+72403685 | None:intergenic |
| AAACTCAAACCAATGCCTAA+AGG | 0.488700 | 2_1:-72402330 | Msa0222980:CDS |
| TGGTTGGATGAATCTTCAAC+AGG | 0.489385 | 2_1:-72402196 | Msa0222980:CDS |
| GCTAAAGGTCAGGCTAGTAG+TGG | 0.495455 | 2_1:-72404144 | Msa0222980:CDS |
| TCCTTTAACCGCGCCTTCCA+AGG | 0.498449 | 2_1:-72403905 | Msa0222980:CDS |
| TAAATTTGTTACCTTCTGCT+TGG | 0.498904 | 2_1:+72402936 | None:intergenic |
| ATTAGTTCAGAGGAATCTAC+AGG | 0.503053 | 2_1:-72404769 | Msa0222980:CDS |
| ACATTAGCTCTAGTACCTTC+CGG | 0.504712 | 2_1:-72403876 | Msa0222980:CDS |
| TCTAAAGCTGTGAATAAGGA+AGG | 0.504713 | 2_1:+72402507 | None:intergenic |
| TTGTGGCTTACTCCTTCAGA+AGG | 0.507237 | 2_1:+72403667 | None:intergenic |
| ATTTGTAAATAGGATTGTAC+TGG | 0.509013 | 2_1:-72401988 | Msa0222980:three_prime_UTR |
| AACAAATGAAGAAAATAATA+CGG | 0.513989 | 2_1:-72403182 | Msa0222980:CDS |
| GATGGCAAGACAACAGATCA+AGG | 0.516248 | 2_1:-72404099 | Msa0222980:CDS |
| AAATTTCGGTTTGCTTAGAC+CGG | 0.520967 | 2_1:+72403857 | None:intergenic |
| CAAATTCAAGAAGTTAATCA+AGG | 0.522924 | 2_1:-72404745 | Msa0222980:CDS |
| GAAGTTGATGAAACAGTTGA+AGG | 0.525274 | 2_1:-72403076 | Msa0222980:CDS |
| GCACTTCATCAGAAGAAAGA+TGG | 0.526893 | 2_1:-72404117 | Msa0222980:CDS |
| AGCTGTCAAGACAATACAAT+CGG | 0.528083 | 2_1:-72402959 | Msa0222980:CDS |
| AAGGAGTAAGCCACAAAGGA+TGG | 0.528298 | 2_1:-72403660 | Msa0222980:CDS |
| GATGAATCTTCAACAGGAAG+AGG | 0.528776 | 2_1:-72402190 | Msa0222980:CDS |
| GAAATTGATTATCACTTGAG+TGG | 0.531719 | 2_1:-72404837 | Msa0222980:five_prime_UTR |
| ATGATAAGATTCACAAGAGT+AGG | 0.532170 | 2_1:-72403288 | Msa0222980:CDS |
| ATTTCTTCAAAGCCTTCTGA+AGG | 0.533424 | 2_1:-72403679 | Msa0222980:CDS |
| TCATCGTTGGGGTGTCAAAA+GGG | 0.534999 | 2_1:-72404689 | Msa0222980:CDS |
| AGAGAAATATCAAATGCTAA+AGG | 0.539737 | 2_1:-72404159 | Msa0222980:CDS |
| AAGTTAATCAAGGATGTATG+TGG | 0.539941 | 2_1:-72404735 | Msa0222980:CDS |
| CTATCTTGTTAAAGAAGTAT+GGG | 0.540514 | 2_1:-72402304 | Msa0222980:CDS |
| TTCGGTTTGCTTAGACCGGA+AGG | 0.541362 | 2_1:+72403861 | None:intergenic |
| ATCATCTCTTAATGAATCGA+TGG | 0.543352 | 2_1:-72403398 | Msa0222980:CDS |
| GAAGATAAAACATGCACTTG+TGG | 0.545595 | 2_1:-72403599 | Msa0222980:CDS |
| AAAACACTTGATTAGTTCAG+AGG | 0.547935 | 2_1:-72404779 | Msa0222980:CDS |
| TCCACAGCAGATAAAGAACT+AGG | 0.548583 | 2_1:+72403034 | None:intergenic |
| TTTCTAAGAGATATAGACAT+TGG | 0.556008 | 2_1:-72403988 | Msa0222980:CDS |
| TCTAATGTCTGATCTAACTC+TGG | 0.557841 | 2_1:+72402252 | None:intergenic |
| ATTCTTGATTATCATCGTTG+GGG | 0.567532 | 2_1:-72404700 | Msa0222980:CDS |
| CTAAGAGATATAGACATTGG+TGG | 0.569025 | 2_1:-72403985 | Msa0222980:CDS |
| GCACGAGCAAAGAGATCAAG+TGG | 0.575717 | 2_1:-72403348 | Msa0222980:CDS |
| AGTTAATCAAGGATGTATGT+GGG | 0.578331 | 2_1:-72404734 | Msa0222980:CDS |
| AATACAATCGGCCAAGCAGA+AGG | 0.578706 | 2_1:-72402947 | Msa0222980:intron |
| ATCTCACAAAGCTTAGATGT+TGG | 0.579095 | 2_1:-72403517 | Msa0222980:CDS |
| GAAATTTGGCACTTTCCCAA+GGG | 0.581947 | 2_1:-72403841 | Msa0222980:CDS |
| GAGTTTGTAGTTGAATGCAA+AGG | 0.582588 | 2_1:+72402347 | None:intergenic |
| GTGTGTAGCACTTGAACTTG+AGG | 0.590237 | 2_1:-72402166 | Msa0222980:CDS |
| ATTTGACGAAAAGAAGTGGT+TGG | 0.594040 | 2_1:-72402212 | Msa0222980:CDS |
| TGGTTATGCAGGACAAGGTG+TGG | 0.594929 | 2_1:-72404865 | None:intergenic |
| GATGAAACAGTTGAAGGGAG+TGG | 0.594980 | 2_1:-72403070 | Msa0222980:CDS |
| CATGACTACTAATCTTAGCA+AGG | 0.600526 | 2_1:-72403005 | Msa0222980:CDS |
| AAACAATGATGATGTTATGG+AGG | 0.602597 | 2_1:-72404043 | Msa0222980:CDS |
| CTAAAGGTCAGGCTAGTAGT+GGG | 0.612454 | 2_1:-72404143 | Msa0222980:CDS |
| AAGTTGATGAAACAGTTGAA+GGG | 0.625255 | 2_1:-72403075 | Msa0222980:CDS |
| TCTTGGAATCGATAGTGTCA+TGG | 0.628298 | 2_1:-72403722 | Msa0222980:CDS |
| TACAGATGCAGAATCCCTCA+AGG | 0.632857 | 2_1:-72404306 | Msa0222980:intron |
| AAAGAGTAAGAGCTTGAGTG+AGG | 0.644516 | 2_1:-72403476 | Msa0222980:CDS |
| TGTTATGGAGGTAATTAGTG+TGG | 0.644603 | 2_1:-72404031 | Msa0222980:CDS |
| GTTAATCAAGGATGTATGTG+GGG | 0.647876 | 2_1:-72404733 | Msa0222980:CDS |
| ATCATGTAGAATGAATCCTA+AGG | 0.650965 | 2_1:+72403216 | None:intergenic |
| CGTGATTTGACGAAAAGAAG+TGG | 0.655367 | 2_1:-72402216 | Msa0222980:CDS |
| AATCATGGTTATGCAGGACA+AGG | 0.656311 | 2_1:-72404870 | None:intergenic |
| GCAGACCCAAATGCGATACA+CGG | 0.657845 | 2_1:-72402547 | Msa0222980:CDS |
| CCACAAAGGATGGAATCAAG+TGG | 0.658566 | 2_1:-72403650 | Msa0222980:CDS |
| TCTGAAGGAGTAAGCCACAA+AGG | 0.665084 | 2_1:-72403664 | Msa0222980:CDS |
| AAATTTGGCACTTTCCCAAG+GGG | 0.665909 | 2_1:-72403840 | Msa0222980:CDS |
| AATTTGGCACTTTCCCAAGG+GGG | 0.673506 | 2_1:-72403839 | Msa0222980:CDS |
| AAATTGCTTCTAGAAAACAT+AGG | 0.675542 | 2_1:+72403259 | None:intergenic |
| AAATGAAGAAAATAATACGG+TGG | 0.680803 | 2_1:-72403179 | Msa0222980:CDS |
| GACTACTAATCTTAGCAAGG+AGG | 0.711361 | 2_1:-72403002 | Msa0222980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACATGATAAAAATATATATA+AGG | - | chr2_1:72402294-72402313 | Msa0222980:CDS | 10.0% |
| !! | CATGATAAAAATATATATAA+GGG | - | chr2_1:72402295-72402314 | Msa0222980:CDS | 10.0% |
| !! | ATGATAAAAATATATATAAG+GGG | - | chr2_1:72402296-72402315 | Msa0222980:CDS | 10.0% |
| !!! | AGAAATTGATTATTTGTTAT+GGG | - | chr2_1:72402010-72402029 | Msa0222980:three_prime_UTR | 15.0% |
| !!! | TTTTAATGATTATAAAGCAA+TGG | + | chr2_1:72402268-72402287 | None:intergenic | 15.0% |
| !!! | TTTAAATAATTCTAAGGTAT+AGG | + | chr2_1:72402392-72402411 | None:intergenic | 15.0% |
| !! | TTCTACTTTAAATAATTCTA+AGG | + | chr2_1:72402398-72402417 | None:intergenic | 15.0% |
| !!! | AGATTCATGATTATATTTTA+TGG | - | chr2_1:72402537-72402556 | Msa0222980:CDS | 15.0% |
| !!! | AATTCTTTATTTATTTGTGA+CGG | + | chr2_1:72402566-72402585 | None:intergenic | 15.0% |
| !! | AACAAATGAAGAAAATAATA+CGG | - | chr2_1:72403630-72403649 | Msa0222980:CDS | 15.0% |
| !!! | ATCATTACTAATCTTTTTTT+TGG | - | chr2_1:72404062-72404081 | Msa0222980:CDS | 15.0% |
| !!! | ATGTTGATTAATTTGTAAAT+AGG | - | chr2_1:72404814-72404833 | Msa0222980:five_prime_UTR | 15.0% |
| !!! | CAGAAATTGATTATTTGTTA+TGG | - | chr2_1:72402009-72402028 | Msa0222980:three_prime_UTR | 20.0% |
| !! | AGTGATTTATCAATCTTTAA+AGG | + | chr2_1:72403697-72403716 | None:intergenic | 20.0% |
| ! | CAAATTCAAGAAGTTAATCA+AGG | - | chr2_1:72402067-72402086 | Msa0222980:three_prime_UTR | 25.0% |
| ! | ATATTCTTGATTATCATCGT+TGG | - | chr2_1:72402110-72402129 | Msa0222980:exon | 25.0% |
| ! | TATTCTTGATTATCATCGTT+GGG | - | chr2_1:72402111-72402130 | Msa0222980:exon | 25.0% |
| ! | ATAAAAGAAGAAACATAGTG+TGG | + | chr2_1:72402197-72402216 | None:intergenic | 25.0% |
| !! | TCTTTTTCTTATCTGCATAT+AGG | + | chr2_1:72402458-72402477 | None:intergenic | 25.0% |
| ! | AGAGAAATATCAAATGCTAA+AGG | - | chr2_1:72402653-72402672 | Msa0222980:CDS | 25.0% |
| ! | AATTGAAATGTCTCTGTTAA+GGG | + | chr2_1:72402741-72402760 | None:intergenic | 25.0% |
| ! | TAATTGAAATGTCTCTGTTA+AGG | + | chr2_1:72402742-72402761 | None:intergenic | 25.0% |
| !! | CAAAAACAATGATGATGTTA+TGG | - | chr2_1:72402766-72402785 | Msa0222980:intron | 25.0% |
| !! | TTTCTAAGAGATATAGACAT+TGG | - | chr2_1:72402824-72402843 | Msa0222980:intron | 25.0% |
| !! | AAATTGCTTCTAGAAAACAT+AGG | + | chr2_1:72403556-72403575 | None:intergenic | 25.0% |
| ! | AAATGAAGAAAATAATACGG+TGG | - | chr2_1:72403633-72403652 | Msa0222980:CDS | 25.0% |
| !!! | ATCACTTGAACATTTTAAAG+AGG | - | chr2_1:72403711-72403730 | Msa0222980:CDS | 25.0% |
| ! | TTTGGCTATATATATATACC+AGG | - | chr2_1:72404080-72404099 | Msa0222980:CDS | 25.0% |
| ! | CTATATATATATACCAGGAA+AGG | - | chr2_1:72404085-72404104 | Msa0222980:CDS | 25.0% |
| !! | GTCTTTGACATATTTGAAAT+TGG | + | chr2_1:72404213-72404232 | None:intergenic | 25.0% |
| !! | CAAAGACATTCTTGAATTTT+CGG | - | chr2_1:72404226-72404245 | Msa0222980:intron | 25.0% |
| !! | AAAGACATTCTTGAATTTTC+GGG | - | chr2_1:72404227-72404246 | Msa0222980:intron | 25.0% |
| ! | ACTATCTTGTTAAAGAAGTA+TGG | - | chr2_1:72404507-72404526 | Msa0222980:intron | 25.0% |
| !! | CTATCTTGTTAAAGAAGTAT+GGG | - | chr2_1:72404508-72404527 | Msa0222980:intron | 25.0% |
| ! | ATTTGTAAATAGGATTGTAC+TGG | - | chr2_1:72404824-72404843 | Msa0222980:five_prime_UTR | 25.0% |
| GAAATTGATTATCACTTGAG+TGG | - | chr2_1:72401975-72401994 | Msa0222980:three_prime_UTR | 30.0% | |
| ! | AAAACACTTGATTAGTTCAG+AGG | - | chr2_1:72402033-72402052 | Msa0222980:three_prime_UTR | 30.0% |
| AAGTTAATCAAGGATGTATG+TGG | - | chr2_1:72402077-72402096 | Msa0222980:three_prime_UTR | 30.0% | |
| AGTTAATCAAGGATGTATGT+GGG | - | chr2_1:72402078-72402097 | Msa0222980:three_prime_UTR | 30.0% | |
| ATTCTTGATTATCATCGTTG+GGG | - | chr2_1:72402112-72402131 | Msa0222980:exon | 30.0% | |
| CAGCTGTTTATATACACAAA+AGG | + | chr2_1:72402347-72402366 | None:intergenic | 30.0% | |
| !!! | ATTTTGTTGGTCTTGCAAAA+TGG | + | chr2_1:72402481-72402500 | None:intergenic | 30.0% |
| ! | CATCTGTAACAACATTTTGT+TGG | + | chr2_1:72402494-72402513 | None:intergenic | 30.0% |
| GAATCTTTAAACAACCTTGA+GGG | + | chr2_1:72402523-72402542 | None:intergenic | 30.0% | |
| TGAATCTTTAAACAACCTTG+AGG | + | chr2_1:72402524-72402543 | None:intergenic | 30.0% | |
| AATATCAAATGCTAAAGGTC+AGG | - | chr2_1:72402658-72402677 | Msa0222980:CDS | 30.0% | |
| ! | AAACAATGATGATGTTATGG+AGG | - | chr2_1:72402769-72402788 | Msa0222980:intron | 30.0% |
| AAAGCGAAATTGACAAAATC+AGG | - | chr2_1:72402878-72402897 | Msa0222980:intron | 30.0% | |
| !!! | AAACTTGATCCAAGCTTTTT+TGG | + | chr2_1:72403025-72403044 | None:intergenic | 30.0% |
| ATCATCTCTTAATGAATCGA+TGG | - | chr2_1:72403414-72403433 | Msa0222980:CDS | 30.0% | |
| ATGATAAGATTCACAAGAGT+AGG | - | chr2_1:72403524-72403543 | Msa0222980:CDS | 30.0% | |
| ATCATGTAGAATGAATCCTA+AGG | + | chr2_1:72403599-72403618 | None:intergenic | 30.0% | |
| !! | AAGTTGATGAAACAGTTGAA+GGG | - | chr2_1:72403737-72403756 | Msa0222980:CDS | 30.0% |
| !! | TAAATTTGTTACCTTCTGCT+TGG | + | chr2_1:72403879-72403898 | None:intergenic | 30.0% |
| ACTAACGTAACATTTCTTTG+AGG | - | chr2_1:72403915-72403934 | Msa0222980:CDS | 30.0% | |
| !! | TTCTTCTAAAGCTGTGAATA+AGG | + | chr2_1:72404312-72404331 | None:intergenic | 30.0% |
| !! | TCACCAACTTCTTTTTAACT+TGG | - | chr2_1:72404388-72404407 | Msa0222980:intron | 30.0% |
| TGACCAAGTTAAAAAGAAGT+TGG | + | chr2_1:72404394-72404413 | None:intergenic | 30.0% | |
| !!! | AAGGGTTTTGGAAAATAAGT+TGG | + | chr2_1:72404449-72404468 | None:intergenic | 30.0% |
| AGTTTGTAGTTGAATGCAAA+GGG | + | chr2_1:72404467-72404486 | None:intergenic | 30.0% | |
| TTAACAAGATAGTTCCCTTT+AGG | + | chr2_1:72404500-72404519 | None:intergenic | 30.0% | |
| AAATTCTCTTCTCATGATGT+TGG | - | chr2_1:72404696-72404715 | Msa0222980:CDS | 30.0% | |
| !!! | ATGATTTTTTGAAGCAGCAT+AGG | - | chr2_1:72404785-72404804 | Msa0222980:CDS | 30.0% |
| ATTAGTTCAGAGGAATCTAC+AGG | - | chr2_1:72402043-72402062 | Msa0222980:three_prime_UTR | 35.0% | |
| GTTAATCAAGGATGTATGTG+GGG | - | chr2_1:72402079-72402098 | Msa0222980:three_prime_UTR | 35.0% | |
| GGTATGAAATTGCTTACATC+TGG | + | chr2_1:72402176-72402195 | None:intergenic | 35.0% | |
| ACAAAAGGTTCTTGATGAGA+TGG | + | chr2_1:72402332-72402351 | None:intergenic | 35.0% | |
| TGTTATGGAGGTAATTAGTG+TGG | - | chr2_1:72402781-72402800 | Msa0222980:intron | 35.0% | |
| CTAAGAGATATAGACATTGG+TGG | - | chr2_1:72402827-72402846 | Msa0222980:intron | 35.0% | |
| ! | CTAATGTTTTTCACCTTGGA+AGG | + | chr2_1:72402923-72402942 | None:intergenic | 35.0% |
| ! | AGAGCTAATGTTTTTCACCT+TGG | + | chr2_1:72402927-72402946 | None:intergenic | 35.0% |
| ! | AAATTTCGGTTTGCTTAGAC+CGG | + | chr2_1:72402958-72402977 | None:intergenic | 35.0% |
| !! | GAAGGCTTTGAAGAAATACT+TGG | + | chr2_1:72403130-72403149 | None:intergenic | 35.0% |
| ATTTCTTCAAAGCCTTCTGA+AGG | - | chr2_1:72403133-72403152 | Msa0222980:CDS | 35.0% | |
| GAAGATAAAACATGCACTTG+TGG | - | chr2_1:72403213-72403232 | Msa0222980:CDS | 35.0% | |
| CTTGTGGAACTCAAAAAAAG+TGG | - | chr2_1:72403229-72403248 | Msa0222980:CDS | 35.0% | |
| AGATCTCTTTCTCGTTATTG+TGG | + | chr2_1:72403279-72403298 | None:intergenic | 35.0% | |
| ATCTCACAAAGCTTAGATGT+TGG | - | chr2_1:72403295-72403314 | Msa0222980:CDS | 35.0% | |
| AATCCTAAGGACTCAAGATT+AGG | + | chr2_1:72403586-72403605 | None:intergenic | 35.0% | |
| !! | GAAGTTGATGAAACAGTTGA+AGG | - | chr2_1:72403736-72403755 | Msa0222980:CDS | 35.0% |
| CATGACTACTAATCTTAGCA+AGG | - | chr2_1:72403807-72403826 | Msa0222980:CDS | 35.0% | |
| TTGTCTTGACAGCTAATTTC+AGG | + | chr2_1:72403847-72403866 | None:intergenic | 35.0% | |
| AGCTGTCAAGACAATACAAT+CGG | - | chr2_1:72403853-72403872 | Msa0222980:CDS | 35.0% | |
| !!! | TCTTGAATTTTCGGGTTTCA+TGG | - | chr2_1:72404235-72404254 | Msa0222980:intron | 35.0% |
| !!! | CTTGAATTTTCGGGTTTCAT+GGG | - | chr2_1:72404236-72404255 | Msa0222980:intron | 35.0% |
| GTGAATAAGGAAGGTTTCAT+TGG | + | chr2_1:72404299-72404318 | None:intergenic | 35.0% | |
| ! | TCTAAAGCTGTGAATAAGGA+AGG | + | chr2_1:72404308-72404327 | None:intergenic | 35.0% |
| ! | TAGTTGAATGCAAAGGGTTT+TGG | + | chr2_1:72404461-72404480 | None:intergenic | 35.0% |
| GAGTTTGTAGTTGAATGCAA+AGG | + | chr2_1:72404468-72404487 | None:intergenic | 35.0% | |
| AAACTCAAACCAATGCCTAA+AGG | - | chr2_1:72404482-72404501 | Msa0222980:intron | 35.0% | |
| AACTCAAACCAATGCCTAAA+GGG | - | chr2_1:72404483-72404502 | Msa0222980:intron | 35.0% | |
| TCTAATGTCTGATCTAACTC+TGG | + | chr2_1:72404563-72404582 | None:intergenic | 35.0% | |
| CAGACATTAGATGATGTTGT+TGG | - | chr2_1:72404572-72404591 | Msa0222980:intron | 35.0% | |
| ATTTGACGAAAAGAAGTGGT+TGG | - | chr2_1:72404600-72404619 | Msa0222980:intron | 35.0% | |
| GCACTTCATCAGAAGAAAGA+TGG | - | chr2_1:72402695-72402714 | Msa0222980:CDS | 40.0% | |
| ! | GTCAATTTCGCTTTGTTGTG+AGG | + | chr2_1:72402872-72402891 | None:intergenic | 40.0% |
| !! | ACATTAGCTCTAGTACCTTC+CGG | - | chr2_1:72402936-72402955 | Msa0222980:intron | 40.0% |
| GGTCTAAGCAAACCGAAATT+TGG | - | chr2_1:72402957-72402976 | Msa0222980:CDS | 40.0% | |
| !! | CTTGGGAAAGTGCCAAATTT+CGG | + | chr2_1:72402972-72402991 | None:intergenic | 40.0% |
| GAAATTTGGCACTTTCCCAA+GGG | - | chr2_1:72402971-72402990 | Msa0222980:CDS | 40.0% | |
| AAATTTGGCACTTTCCCAAG+GGG | - | chr2_1:72402972-72402991 | Msa0222980:CDS | 40.0% | |
| TTATGAAACGCCGAAGCTTT+CGG | - | chr2_1:72403060-72403079 | Msa0222980:CDS | 40.0% | |
| TCTTGGAATCGATAGTGTCA+TGG | - | chr2_1:72403090-72403109 | Msa0222980:CDS | 40.0% | |
| AAAGAGTAAGAGCTTGAGTG+AGG | - | chr2_1:72403336-72403355 | Msa0222980:CDS | 40.0% | |
| !! | TAGGCTAGCTTCATGTTTGT+TGG | + | chr2_1:72403383-72403402 | None:intergenic | 40.0% |
| GAGATGATGTTCTTCGCATT+AGG | + | chr2_1:72403402-72403421 | None:intergenic | 40.0% | |
| ATGCCTAATCTTGAGTCCTT+AGG | - | chr2_1:72403580-72403599 | Msa0222980:CDS | 40.0% | |
| ! | TCCTAGTTCTTTATCTGCTG+TGG | - | chr2_1:72403777-72403796 | Msa0222980:CDS | 40.0% |
| TCCACAGCAGATAAAGAACT+AGG | + | chr2_1:72403781-72403800 | None:intergenic | 40.0% | |
| GACTACTAATCTTAGCAAGG+AGG | - | chr2_1:72403810-72403829 | Msa0222980:CDS | 40.0% | |
| ATAAGGAAGGTTTCATTGGC+TGG | + | chr2_1:72404295-72404314 | None:intergenic | 40.0% | |
| AGATAGTTCCCTTTAGGCAT+TGG | + | chr2_1:72404494-72404513 | None:intergenic | 40.0% | |
| CGTGATTTGACGAAAAGAAG+TGG | - | chr2_1:72404596-72404615 | Msa0222980:intron | 40.0% | |
| TGGTTGGATGAATCTTCAAC+AGG | - | chr2_1:72404616-72404635 | Msa0222980:intron | 40.0% | |
| GATGAATCTTCAACAGGAAG+AGG | - | chr2_1:72404622-72404641 | Msa0222980:intron | 40.0% | |
| ! | ATCATCGTTGGGGTGTCAAA+AGG | - | chr2_1:72402122-72402141 | Msa0222980:CDS | 45.0% |
| ! | TCATCGTTGGGGTGTCAAAA+GGG | - | chr2_1:72402123-72402142 | Msa0222980:CDS | 45.0% |
| TACAGATGCAGAATCCCTCA+AGG | - | chr2_1:72402506-72402525 | Msa0222980:CDS | 45.0% | |
| CTAAAGGTCAGGCTAGTAGT+GGG | - | chr2_1:72402669-72402688 | Msa0222980:CDS | 45.0% | |
| GATGGCAAGACAACAGATCA+AGG | - | chr2_1:72402713-72402732 | Msa0222980:CDS | 45.0% | |
| CGAAATTTGGCACTTTCCCA+AGG | - | chr2_1:72402970-72402989 | Msa0222980:CDS | 45.0% | |
| AATTTGGCACTTTCCCAAGG+GGG | - | chr2_1:72402973-72402992 | Msa0222980:CDS | 45.0% | |
| AAAGTTGCTAGCTGGAACTC+AGG | - | chr2_1:72402997-72403016 | Msa0222980:CDS | 45.0% | |
| ACTCAGGCTCCAAAAAAGCT+TGG | - | chr2_1:72403013-72403032 | Msa0222980:CDS | 45.0% | |
| TTGTGGCTTACTCCTTCAGA+AGG | + | chr2_1:72403148-72403167 | None:intergenic | 45.0% | |
| TCTGAAGGAGTAAGCCACAA+AGG | - | chr2_1:72403148-72403167 | Msa0222980:CDS | 45.0% | |
| AAGGAGTAAGCCACAAAGGA+TGG | - | chr2_1:72403152-72403171 | Msa0222980:CDS | 45.0% | |
| CCACTTGATTCCATCCTTTG+TGG | + | chr2_1:72403165-72403184 | None:intergenic | 45.0% | |
| CCACAAAGGATGGAATCAAG+TGG | - | chr2_1:72403162-72403181 | Msa0222980:CDS | 45.0% | |
| GATGAAACAGTTGAAGGGAG+TGG | - | chr2_1:72403742-72403761 | Msa0222980:CDS | 45.0% | |
| AATACAATCGGCCAAGCAGA+AGG | - | chr2_1:72403865-72403884 | Msa0222980:CDS | 45.0% | |
| GTCTACCGTGTATCGCATTT+GGG | + | chr2_1:72404273-72404292 | None:intergenic | 45.0% | |
| GTGTGTAGCACTTGAACTTG+AGG | - | chr2_1:72404646-72404665 | Msa0222980:intron | 45.0% | |
| !! | AATATATAAATATAAATATC+AGG | - | chr2_1:72402619-72402638 | Msa0222980:CDS | 5.0% |
| GCTAAAGGTCAGGCTAGTAG+TGG | - | chr2_1:72402668-72402687 | Msa0222980:CDS | 50.0% | |
| ! | GTTTTTCACCTTGGAAGGCG+CGG | + | chr2_1:72402918-72402937 | None:intergenic | 50.0% |
| ! | TTCGGTTTGCTTAGACCGGA+AGG | + | chr2_1:72402954-72402973 | None:intergenic | 50.0% |
| ! | GCTAGCAACTTTTCCCCCTT+GGG | + | chr2_1:72402989-72403008 | None:intergenic | 50.0% |
| ! | AGCTAGCAACTTTTCCCCCT+TGG | + | chr2_1:72402990-72403009 | None:intergenic | 50.0% |
| AAGGGGGAAAAGTTGCTAGC+TGG | - | chr2_1:72402989-72403008 | Msa0222980:CDS | 50.0% | |
| GCACGAGCAAAGAGATCAAG+TGG | - | chr2_1:72403464-72403483 | Msa0222980:CDS | 50.0% | |
| CGCGTATTCGATTCCTTTCC+TGG | + | chr2_1:72404101-72404120 | None:intergenic | 50.0% | |
| GCAGACCCAAATGCGATACA+CGG | - | chr2_1:72404265-72404284 | Msa0222980:intron | 50.0% | |
| GGTCTACCGTGTATCGCATT+TGG | + | chr2_1:72404274-72404293 | None:intergenic | 50.0% | |
| TCCTTTAACCGCGCCTTCCA+AGG | - | chr2_1:72402907-72402926 | Msa0222980:intron | 55.0% | |
| ! | ACCTTGGAAGGCGCGGTTAA+AGG | + | chr2_1:72402911-72402930 | None:intergenic | 55.0% |
| AGATCGCTCGCCGAAAGCTT+CGG | + | chr2_1:72403073-72403092 | None:intergenic | 55.0% | |
| AAGCTTTCGGCGAGCGATCT+TGG | - | chr2_1:72403073-72403092 | Msa0222980:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 72401957 | 72404877 | 72401957 | ID=Msa0222980;Name=Msa0222980 |
| chr2_1 | mRNA | 72401957 | 72404877 | 72401957 | ID=Msa0222980-mRNA-1;Parent=Msa0222980;Name=Msa0222980-mRNA-1;_AED=0.03;_eAED=0.03;_QI=71|1|1|1|1|1|4|165|689 |
| chr2_1 | exon | 72401957 | 72402732 | 72401957 | ID=Msa0222980-mRNA-1:exon:20966;Parent=Msa0222980-mRNA-1 |
| chr2_1 | exon | 72402948 | 72404193 | 72402948 | ID=Msa0222980-mRNA-1:exon:20965;Parent=Msa0222980-mRNA-1 |
| chr2_1 | exon | 72404307 | 72404368 | 72404307 | ID=Msa0222980-mRNA-1:exon:20964;Parent=Msa0222980-mRNA-1 |
| chr2_1 | exon | 72404656 | 72404877 | 72404656 | ID=Msa0222980-mRNA-1:exon:20963;Parent=Msa0222980-mRNA-1 |
| chr2_1 | five_prime_UTR | 72404807 | 72404877 | 72404807 | ID=Msa0222980-mRNA-1:five_prime_utr;Parent=Msa0222980-mRNA-1 |
| chr2_1 | CDS | 72404656 | 72404806 | 72404656 | ID=Msa0222980-mRNA-1:cds;Parent=Msa0222980-mRNA-1 |
| chr2_1 | CDS | 72404307 | 72404368 | 72404307 | ID=Msa0222980-mRNA-1:cds;Parent=Msa0222980-mRNA-1 |
| chr2_1 | CDS | 72402948 | 72404193 | 72402948 | ID=Msa0222980-mRNA-1:cds;Parent=Msa0222980-mRNA-1 |
| chr2_1 | CDS | 72402122 | 72402732 | 72402122 | ID=Msa0222980-mRNA-1:cds;Parent=Msa0222980-mRNA-1 |
| chr2_1 | three_prime_UTR | 72401957 | 72402121 | 72401957 | ID=Msa0222980-mRNA-1:three_prime_utr;Parent=Msa0222980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
