Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713380 | XP_003611448.1 | 97.302 | 630 | 16 | 1 | 1 | 630 | 1 | 629 | 0.0 | 1264 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713380 | sp|Q9FUR2|IP5P2_ARATH | 55.354 | 663 | 233 | 11 | 1 | 620 | 1 | 643 | 0.0 | 676 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713380 | G7JZV2 | 97.302 | 630 | 16 | 1 | 1 | 630 | 1 | 629 | 0.0 | 1264 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012710 | Msa0713380 | 0.808045 | 3.756126e-50 | -8.615850e-47 |
| Msa0015090 | Msa0713380 | 0.813785 | 2.146761e-51 | -8.615850e-47 |
| Msa0026630 | Msa0713380 | 0.804230 | 2.387051e-49 | -8.615850e-47 |
| Msa0042550 | Msa0713380 | 0.802927 | 4.446995e-49 | -8.615850e-47 |
| Msa0043650 | Msa0713380 | 0.802662 | 5.045042e-49 | -8.615850e-47 |
| Msa0045550 | Msa0713380 | 0.810354 | 1.201567e-50 | -8.615850e-47 |
| Msa0049750 | Msa0713380 | 0.814312 | 1.643003e-51 | -8.615850e-47 |
| Msa0055640 | Msa0713380 | 0.800155 | 1.645884e-48 | -8.615850e-47 |
| Msa0058600 | Msa0713380 | 0.809166 | 2.164080e-50 | -8.615850e-47 |
| Msa0061500 | Msa0713380 | 0.815677 | 8.176513e-52 | -8.615850e-47 |
| Msa0071250 | Msa0713380 | 0.824934 | 6.167567e-54 | -8.615850e-47 |
| Msa0092410 | Msa0713380 | 0.843943 | 1.026707e-58 | -8.615850e-47 |
| Msa0094710 | Msa0713380 | 0.801551 | 8.534786e-49 | -8.615850e-47 |
| Msa0705990 | Msa0713380 | 0.803756 | 2.994444e-49 | -8.615850e-47 |
| Msa0713380 | Msa0721340 | 0.810276 | 1.249092e-50 | -8.615850e-47 |
| Msa0713380 | Msa0724170 | 0.806499 | 7.985030e-50 | -8.615850e-47 |
| Msa0713380 | Msa0727720 | 0.812904 | 3.352154e-51 | -8.615850e-47 |
| Msa0713380 | Msa0741070 | 0.817832 | 2.687845e-52 | -8.615850e-47 |
| Msa0713380 | Msa0749440 | 0.813441 | 2.555291e-51 | -8.615850e-47 |
| Msa0713380 | Msa0750850 | 0.801363 | 9.327662e-49 | -8.615850e-47 |
| Msa0713380 | Msa0751850 | 0.802637 | 5.104244e-49 | -8.615850e-47 |
| Msa0713380 | Msa0755460 | 0.935572 | 6.865586e-97 | -8.615850e-47 |
| Msa0713380 | Msa0763890 | 0.809952 | 1.467164e-50 | -8.615850e-47 |
| Msa0713380 | Msa0763920 | 0.823521 | 1.324742e-53 | -8.615850e-47 |
| Msa0713380 | Msa0766760 | 0.801399 | 9.173204e-49 | -8.615850e-47 |
| Msa0713380 | Msa0795340 | 0.833031 | 6.735511e-56 | -8.615850e-47 |
| Msa0713380 | Msa0809940 | 0.813093 | 3.047244e-51 | -8.615850e-47 |
| Msa0713380 | Msa0812950 | 0.824594 | 7.415411e-54 | -8.615850e-47 |
| Msa0713380 | Msa0836650 | 0.805493 | 1.299979e-49 | -8.615850e-47 |
| Msa0713380 | Msa0844110 | 0.832304 | 1.020241e-55 | -8.615850e-47 |
| Msa0713380 | Msa0857940 | 0.811949 | 5.419824e-51 | -8.615850e-47 |
| Msa0713380 | Msa0863720 | 0.813305 | 2.737676e-51 | -8.615850e-47 |
| Msa0713380 | Msa0894710 | 0.812193 | 4.794089e-51 | -8.615850e-47 |
| Msa0713380 | Msa0898320 | 0.815502 | 8.945224e-52 | -8.615850e-47 |
| Msa0713380 | Msa0902710 | 0.801146 | 1.033018e-48 | -8.615850e-47 |
| Msa0713380 | Msa0902830 | 0.811319 | 7.429593e-51 | -8.615850e-47 |
| Msa0713380 | Msa0972810 | 0.819095 | 1.390322e-52 | -8.615850e-47 |
| Msa0713380 | Msa0981040 | 0.811650 | 6.295007e-51 | -8.615850e-47 |
| Msa0713380 | Msa1011250 | 0.804336 | 2.268446e-49 | -8.615850e-47 |
| Msa0713380 | Msa1014010 | 0.800627 | 1.318902e-48 | -8.615850e-47 |
| Msa0713380 | Msa1043120 | 0.818634 | 1.769906e-52 | -8.615850e-47 |
| Msa0713380 | Msa1063400 | 0.812835 | 3.470900e-51 | -8.615850e-47 |
| Msa0713380 | Msa1068480 | 0.803015 | 4.265329e-49 | -8.615850e-47 |
| Msa0713380 | Msa1093480 | 0.808940 | 2.419266e-50 | -8.615850e-47 |
| Msa0713380 | Msa1115280 | 0.818200 | 2.218621e-52 | -8.615850e-47 |
| Msa0713380 | Msa1143020 | 0.812595 | 3.917484e-51 | -8.615850e-47 |
| Msa0713380 | Msa1144040 | 0.825526 | 4.466799e-54 | -8.615850e-47 |
| Msa0713380 | Msa1171140 | 0.823057 | 1.699744e-53 | -8.615850e-47 |
| Msa0713380 | Msa1173490 | 0.804045 | 2.608181e-49 | -8.615850e-47 |
| Msa0713380 | Msa1208370 | 0.829250 | 5.718013e-55 | -8.615850e-47 |
| Msa0713380 | Msa1208990 | 0.808196 | 3.488340e-50 | -8.615850e-47 |
| Msa0713380 | Msa1209190 | 0.825251 | 5.189586e-54 | -8.615850e-47 |
| Msa0713380 | Msa1209860 | 0.800458 | 1.427621e-48 | -8.615850e-47 |
| Msa0713380 | Msa1214170 | 0.848554 | 5.693296e-60 | -8.615850e-47 |
| Msa0713380 | Msa1221330 | 0.813340 | 2.689958e-51 | -8.615850e-47 |
| Msa0713380 | Msa1232920 | 0.810880 | 9.249148e-51 | -8.615850e-47 |
| Msa0713380 | Msa1235390 | 0.821460 | 3.989797e-53 | -8.615850e-47 |
| Msa0713380 | Msa1236440 | 0.800301 | 1.536997e-48 | -8.615850e-47 |
| Msa0713380 | Msa1260680 | 0.815382 | 9.512915e-52 | -8.615850e-47 |
| Msa0713380 | Msa1270730 | 0.801083 | 1.064423e-48 | -8.615850e-47 |
| Msa0713380 | Msa1275510 | 0.808388 | 3.174493e-50 | -8.615850e-47 |
| Msa0713380 | Msa1291450 | 0.808116 | 3.626888e-50 | -8.615850e-47 |
| Msa0713380 | Msa1332050 | 0.811664 | 6.253754e-51 | -8.615850e-47 |
| Msa0713380 | Msa1335230 | 0.800126 | 1.668146e-48 | -8.615850e-47 |
| Msa0713380 | Msa1338400 | 0.823098 | 1.663347e-53 | -8.615850e-47 |
| Msa0713380 | Msa1349450 | 0.820278 | 7.463191e-53 | -8.615850e-47 |
| Msa0713380 | Msa1360020 | 0.847748 | 9.501028e-60 | -8.615850e-47 |
| Msa0713380 | Msa1368360 | 0.803736 | 3.023618e-49 | -8.615850e-47 |
| Msa0713380 | Msa1371940 | 0.812735 | 3.651073e-51 | -8.615850e-47 |
| Msa0713380 | Msa1372150 | 0.807211 | 5.646455e-50 | -8.615850e-47 |
| Msa0713380 | Msa1401460 | 0.814262 | 1.684575e-51 | -8.615850e-47 |
| Msa0713380 | Msa1412130 | 0.806391 | 8.414664e-50 | -8.615850e-47 |
| Msa0713380 | Msa1424630 | 0.822026 | 2.952384e-53 | -8.615850e-47 |
| Msa0713380 | Msa1425260 | 0.805229 | 1.476463e-49 | -8.615850e-47 |
| Msa0713380 | Msa1430130 | 0.811061 | 8.451773e-51 | -8.615850e-47 |
| Msa0713380 | Msa1430550 | 0.853078 | 3.031144e-61 | -8.615850e-47 |
| Msa0713380 | Msa1448810 | 0.920411 | 1.323389e-87 | -8.615850e-47 |
| Msa0713380 | Msa1457160 | 0.813457 | 2.534516e-51 | -8.615850e-47 |
| Msa0713380 | Msa1460750 | 0.811441 | 6.992045e-51 | -8.615850e-47 |
| Msa0713380 | Msa1462360 | 0.807995 | 3.849403e-50 | -8.615850e-47 |
| Msa0713380 | Msa1465210 | 0.808879 | 2.493249e-50 | -8.615850e-47 |
| Msa0138020 | Msa0713380 | 0.816700 | 4.830547e-52 | -8.615850e-47 |
| Msa0152560 | Msa0713380 | 0.814076 | 1.852363e-51 | -8.615850e-47 |
| Msa0178510 | Msa0713380 | 0.800697 | 1.276214e-48 | -8.615850e-47 |
| Msa0187830 | Msa0713380 | 0.813020 | 3.161750e-51 | -8.615850e-47 |
| Msa0189610 | Msa0713380 | 0.825133 | 5.535025e-54 | -8.615850e-47 |
| Msa0222870 | Msa0713380 | 0.826624 | 2.448877e-54 | -8.615850e-47 |
| Msa0222980 | Msa0713380 | 0.837864 | 4.041689e-57 | -8.615850e-47 |
| Msa0226180 | Msa0713380 | 0.817777 | 2.765482e-52 | -8.615850e-47 |
| Msa0236420 | Msa0713380 | 0.810425 | 1.160179e-50 | -8.615850e-47 |
| Msa0364790 | Msa0713380 | 0.819581 | 1.077471e-52 | -8.615850e-47 |
| Msa0371950 | Msa0713380 | 0.825407 | 4.767937e-54 | -8.615850e-47 |
| Msa0388730 | Msa0713380 | 0.801576 | 8.436405e-49 | -8.615850e-47 |
| Msa0403490 | Msa0713380 | 0.834946 | 2.233432e-56 | -8.615850e-47 |
| Msa0408340 | Msa0713380 | 0.801302 | 9.599012e-49 | -8.615850e-47 |
| Msa0410580 | Msa0713380 | 0.818322 | 2.082594e-52 | -8.615850e-47 |
| Msa0414140 | Msa0713380 | 0.801922 | 7.162781e-49 | -8.615850e-47 |
| Msa0422180 | Msa0713380 | 0.810514 | 1.110073e-50 | -8.615850e-47 |
| Msa0427580 | Msa0713380 | 0.818541 | 1.857689e-52 | -8.615850e-47 |
| Msa0455760 | Msa0713380 | 0.804218 | 2.400946e-49 | -8.615850e-47 |
| Msa0457990 | Msa0713380 | 0.826772 | 2.258450e-54 | -8.615850e-47 |
| Msa0464100 | Msa0713380 | 0.807875 | 4.081750e-50 | -8.615850e-47 |
| Msa0481280 | Msa0713380 | 0.819956 | 8.842442e-53 | -8.615850e-47 |
| Msa0240270 | Msa0713380 | 0.820380 | 7.073897e-53 | -8.615850e-47 |
| Msa0241140 | Msa0713380 | 0.805050 | 1.609870e-49 | -8.615850e-47 |
| Msa0264310 | Msa0713380 | 0.821546 | 3.812389e-53 | -8.615850e-47 |
| Msa0264830 | Msa0713380 | 0.801050 | 1.081280e-48 | -8.615850e-47 |
| Msa0269560 | Msa0713380 | 0.862230 | 5.873086e-64 | -8.615850e-47 |
| Msa0270960 | Msa0713380 | 0.803294 | 3.732965e-49 | -8.615850e-47 |
| Msa0271550 | Msa0713380 | 0.827054 | 1.933983e-54 | -8.615850e-47 |
| Msa0278580 | Msa0713380 | 0.805688 | 1.183205e-49 | -8.615850e-47 |
| Msa0302840 | Msa0713380 | 0.800791 | 1.220897e-48 | -8.615850e-47 |
| Msa0307310 | Msa0713380 | 0.814744 | 1.318427e-51 | -8.615850e-47 |
| Msa0319290 | Msa0713380 | 0.829132 | 6.108874e-55 | -8.615850e-47 |
| Msa0340340 | Msa0713380 | 0.800373 | 1.485693e-48 | -8.615850e-47 |
| Msa0518170 | Msa0713380 | 0.813854 | 2.072633e-51 | -8.615850e-47 |
| Msa0519160 | Msa0713380 | 0.810577 | 1.075681e-50 | -8.615850e-47 |
| Msa0530290 | Msa0713380 | 0.801645 | 8.167342e-49 | -8.615850e-47 |
| Msa0566350 | Msa0713380 | 0.814678 | 1.363210e-51 | -8.615850e-47 |
| Msa0566750 | Msa0713380 | 0.820191 | 7.812747e-53 | -8.615850e-47 |
| Msa0582180 | Msa0713380 | 0.809613 | 1.735705e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713380 | MtrunA17_Chr5g0400311 | 97.302 | 630 | 16 | 1 | 1 | 630 | 1 | 629 | 0.0 | 1264 |
| Msa0713380 | MtrunA17_Chr4g0054951 | 65.773 | 634 | 142 | 10 | 1 | 626 | 1 | 567 | 0.0 | 801 |
| Msa0713380 | MtrunA17_Chr4g0054941 | 62.063 | 630 | 167 | 11 | 5 | 626 | 2 | 567 | 0.0 | 740 |
| Msa0713380 | MtrunA17_Chr6g0466801 | 41.058 | 643 | 319 | 12 | 1 | 614 | 1 | 612 | 1.11e-150 | 449 |
| Msa0713380 | MtrunA17_Chr1g0201271 | 39.847 | 655 | 319 | 15 | 2 | 621 | 7 | 621 | 2.87e-141 | 425 |
| Msa0713380 | MtrunA17_Chr7g0260081 | 50.923 | 271 | 130 | 1 | 363 | 630 | 283 | 553 | 4.51e-88 | 285 |
| Msa0713380 | MtrunA17_Chr7g0260081 | 35.789 | 190 | 105 | 3 | 7 | 195 | 8 | 181 | 1.89e-29 | 123 |
| Msa0713380 | MtrunA17_Chr1g0205121 | 51.087 | 276 | 130 | 3 | 355 | 627 | 303 | 576 | 4.28e-87 | 283 |
| Msa0713380 | MtrunA17_Chr1g0205121 | 34.021 | 194 | 112 | 5 | 1 | 194 | 1 | 178 | 1.62e-26 | 114 |
| Msa0713380 | MtrunA17_Chr5g0394901 | 49.643 | 280 | 136 | 3 | 351 | 627 | 338 | 615 | 2.05e-86 | 282 |
| Msa0713380 | MtrunA17_Chr5g0394901 | 46.226 | 106 | 55 | 1 | 89 | 194 | 77 | 180 | 1.59e-23 | 105 |
| Msa0713380 | MtrunA17_Chr1g0185281 | 50.376 | 266 | 129 | 1 | 365 | 627 | 285 | 550 | 7.74e-84 | 273 |
| Msa0713380 | MtrunA17_Chr1g0185281 | 38.342 | 193 | 91 | 5 | 7 | 193 | 7 | 177 | 3.39e-31 | 128 |
| Msa0713380 | MtrunA17_Chr7g0263111 | 49.808 | 261 | 115 | 2 | 367 | 617 | 170 | 424 | 5.50e-82 | 265 |
| Msa0713380 | MtrunA17_Chr7g0263111 | 34.091 | 176 | 97 | 5 | 13 | 185 | 11 | 170 | 4.84e-25 | 108 |
| Msa0713380 | MtrunA17_Chr8g0355021 | 47.059 | 289 | 130 | 6 | 331 | 611 | 201 | 474 | 1.64e-80 | 263 |
| Msa0713380 | MtrunA17_Chr8g0355021 | 50.667 | 75 | 37 | 0 | 108 | 182 | 64 | 138 | 1.85e-16 | 82.4 |
| Msa0713380 | MtrunA17_Chr8g0382571 | 42.395 | 309 | 167 | 4 | 320 | 623 | 170 | 472 | 1.90e-77 | 254 |
| Msa0713380 | MtrunA17_Chr8g0382571 | 52.778 | 72 | 34 | 0 | 104 | 175 | 37 | 108 | 1.21e-18 | 89.4 |
| Msa0713380 | MtrunA17_Chr8g0375751 | 44.631 | 298 | 162 | 2 | 318 | 612 | 95 | 392 | 2.77e-75 | 247 |
| Msa0713380 | MtrunA17_Chr8g0375751 | 45.882 | 85 | 45 | 1 | 93 | 176 | 47 | 131 | 3.72e-16 | 81.3 |
| Msa0713380 | MtrunA17_Chr1g0165011 | 52.586 | 232 | 107 | 1 | 371 | 599 | 180 | 411 | 3.88e-75 | 247 |
| Msa0713380 | MtrunA17_Chr1g0165011 | 30.636 | 173 | 80 | 4 | 7 | 178 | 4 | 137 | 4.74e-16 | 81.3 |
| Msa0713380 | MtrunA17_Chr6g0452181 | 48.235 | 255 | 124 | 6 | 352 | 599 | 148 | 401 | 2.89e-74 | 245 |
| Msa0713380 | MtrunA17_Chr6g0452181 | 44.156 | 77 | 41 | 1 | 101 | 175 | 51 | 127 | 1.85e-15 | 79.3 |
| Msa0713380 | MtrunA17_Chr6g0479511 | 46.087 | 230 | 123 | 1 | 371 | 599 | 155 | 384 | 3.15e-71 | 235 |
| Msa0713380 | MtrunA17_Chr6g0479511 | 32.800 | 125 | 81 | 2 | 86 | 209 | 28 | 150 | 4.65e-15 | 77.4 |
| Msa0713380 | MtrunA17_Chr1g0189231 | 32.472 | 271 | 142 | 9 | 368 | 601 | 608 | 874 | 1.42e-31 | 131 |
| Msa0713380 | MtrunA17_Chr1g0154491 | 28.521 | 284 | 175 | 13 | 331 | 599 | 65 | 335 | 2.05e-19 | 90.1 |
| Msa0713380 | MtrunA17_Chr6g0488541 | 29.956 | 227 | 126 | 8 | 401 | 607 | 740 | 953 | 1.30e-16 | 84.3 |
| Msa0713380 | MtrunA17_Chr6g0488541 | 33.696 | 92 | 59 | 1 | 368 | 459 | 643 | 732 | 1.34e-11 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0713380 | AT4G18010.1 | 55.354 | 663 | 233 | 11 | 1 | 620 | 1 | 643 | 0.0 | 676 |
| Msa0713380 | AT4G18010.2 | 53.577 | 601 | 218 | 10 | 1 | 560 | 1 | 581 | 0.0 | 585 |
| Msa0713380 | AT1G34120.2 | 41.316 | 547 | 255 | 10 | 84 | 612 | 83 | 581 | 1.12e-136 | 412 |
| Msa0713380 | AT1G34120.1 | 38.486 | 621 | 294 | 13 | 10 | 612 | 27 | 577 | 3.51e-136 | 410 |
| Msa0713380 | AT1G34120.3 | 41.316 | 547 | 254 | 11 | 84 | 612 | 83 | 580 | 7.60e-135 | 407 |
| Msa0713380 | AT2G32010.2 | 36.292 | 631 | 322 | 14 | 17 | 627 | 17 | 587 | 5.83e-119 | 366 |
| Msa0713380 | AT2G32010.1 | 36.292 | 631 | 322 | 14 | 17 | 627 | 17 | 587 | 5.83e-119 | 366 |
| Msa0713380 | AT2G32010.4 | 36.292 | 631 | 322 | 14 | 17 | 627 | 17 | 587 | 5.83e-119 | 366 |
| Msa0713380 | AT2G32010.3 | 36.292 | 631 | 322 | 14 | 17 | 627 | 17 | 587 | 5.83e-119 | 366 |
| Msa0713380 | AT1G34120.5 | 56.680 | 247 | 103 | 2 | 368 | 612 | 182 | 426 | 4.27e-98 | 307 |
| Msa0713380 | AT1G71710.1 | 41.530 | 366 | 164 | 5 | 253 | 614 | 333 | 652 | 6.33e-88 | 287 |
| Msa0713380 | AT1G71710.1 | 40.465 | 215 | 97 | 3 | 1 | 193 | 10 | 215 | 1.40e-39 | 154 |
| Msa0713380 | AT1G71710.2 | 41.530 | 366 | 164 | 5 | 253 | 614 | 324 | 643 | 7.57e-88 | 287 |
| Msa0713380 | AT1G71710.2 | 40.465 | 215 | 97 | 3 | 1 | 193 | 1 | 206 | 1.39e-39 | 154 |
| Msa0713380 | AT1G05470.2 | 48.188 | 276 | 139 | 2 | 355 | 627 | 336 | 610 | 8.65e-86 | 280 |
| Msa0713380 | AT1G05470.2 | 32.990 | 194 | 116 | 2 | 1 | 194 | 1 | 180 | 6.32e-30 | 125 |
| Msa0713380 | AT1G05470.1 | 48.188 | 276 | 139 | 2 | 355 | 627 | 336 | 610 | 8.65e-86 | 280 |
| Msa0713380 | AT1G05470.1 | 32.990 | 194 | 116 | 2 | 1 | 194 | 1 | 180 | 6.32e-30 | 125 |
| Msa0713380 | AT3G63240.2 | 51.493 | 268 | 127 | 2 | 363 | 627 | 273 | 540 | 1.04e-84 | 276 |
| Msa0713380 | AT3G63240.2 | 35.545 | 211 | 108 | 4 | 7 | 214 | 7 | 192 | 8.15e-29 | 121 |
| Msa0713380 | AT3G63240.1 | 51.493 | 268 | 127 | 2 | 363 | 627 | 273 | 540 | 1.04e-84 | 276 |
| Msa0713380 | AT3G63240.1 | 35.545 | 211 | 108 | 4 | 7 | 214 | 7 | 192 | 8.15e-29 | 121 |
| Msa0713380 | AT1G34120.4 | 34.051 | 511 | 251 | 12 | 10 | 502 | 27 | 469 | 8.92e-84 | 271 |
| Msa0713380 | AT2G37440.2 | 51.301 | 269 | 126 | 3 | 332 | 599 | 79 | 343 | 2.93e-83 | 267 |
| Msa0713380 | AT2G37440.2 | 39.815 | 108 | 39 | 2 | 110 | 191 | 3 | 110 | 6.28e-17 | 84.0 |
| Msa0713380 | AT2G37440.1 | 54.065 | 246 | 111 | 2 | 355 | 599 | 180 | 424 | 3.85e-82 | 267 |
| Msa0713380 | AT2G37440.1 | 32.418 | 182 | 100 | 4 | 8 | 188 | 6 | 165 | 4.16e-24 | 106 |
| Msa0713380 | AT2G37440.3 | 54.065 | 246 | 111 | 2 | 355 | 599 | 180 | 424 | 3.85e-82 | 267 |
| Msa0713380 | AT2G37440.3 | 32.418 | 182 | 100 | 4 | 8 | 188 | 6 | 165 | 4.16e-24 | 106 |
| Msa0713380 | AT5G04980.4 | 48.583 | 247 | 123 | 2 | 359 | 601 | 148 | 394 | 1.32e-79 | 258 |
| Msa0713380 | AT5G65090.2 | 51.406 | 249 | 116 | 2 | 356 | 599 | 185 | 433 | 2.17e-79 | 259 |
| Msa0713380 | AT5G65090.2 | 51.316 | 76 | 37 | 0 | 104 | 179 | 8 | 83 | 2.13e-19 | 92.0 |
| Msa0713380 | AT5G04980.1 | 48.583 | 247 | 123 | 2 | 359 | 601 | 183 | 429 | 5.81e-79 | 257 |
| Msa0713380 | AT5G04980.1 | 46.269 | 67 | 36 | 0 | 104 | 170 | 7 | 73 | 1.23e-13 | 73.9 |
| Msa0713380 | AT5G04980.3 | 48.583 | 247 | 123 | 2 | 359 | 601 | 183 | 429 | 5.81e-79 | 257 |
| Msa0713380 | AT5G04980.3 | 46.269 | 67 | 36 | 0 | 104 | 170 | 7 | 73 | 1.23e-13 | 73.9 |
| Msa0713380 | AT2G01900.1 | 45.141 | 319 | 164 | 4 | 305 | 613 | 81 | 398 | 6.49e-79 | 256 |
| Msa0713380 | AT2G01900.1 | 46.667 | 75 | 39 | 1 | 107 | 180 | 59 | 133 | 1.44e-14 | 76.6 |
| Msa0713380 | AT5G04980.2 | 48.583 | 247 | 123 | 2 | 359 | 601 | 212 | 458 | 7.69e-79 | 258 |
| Msa0713380 | AT5G04980.2 | 46.269 | 67 | 36 | 0 | 104 | 170 | 36 | 102 | 1.14e-13 | 74.3 |
| Msa0713380 | AT5G65090.3 | 51.406 | 249 | 116 | 2 | 356 | 599 | 248 | 496 | 9.25e-79 | 259 |
| Msa0713380 | AT5G65090.3 | 51.316 | 76 | 37 | 0 | 104 | 179 | 71 | 146 | 2.96e-19 | 92.0 |
| Msa0713380 | AT5G65090.1 | 51.406 | 249 | 116 | 2 | 356 | 599 | 248 | 496 | 9.25e-79 | 259 |
| Msa0713380 | AT5G65090.1 | 51.316 | 76 | 37 | 0 | 104 | 179 | 71 | 146 | 2.96e-19 | 92.0 |
| Msa0713380 | AT2G01900.3 | 45.141 | 319 | 164 | 4 | 305 | 613 | 89 | 406 | 9.65e-79 | 256 |
| Msa0713380 | AT2G01900.3 | 46.667 | 75 | 39 | 1 | 107 | 180 | 67 | 141 | 1.36e-14 | 76.6 |
| Msa0713380 | AT2G01900.2 | 44.201 | 319 | 158 | 5 | 305 | 613 | 81 | 389 | 1.47e-74 | 245 |
| Msa0713380 | AT2G01900.2 | 46.667 | 75 | 39 | 1 | 107 | 180 | 59 | 133 | 1.50e-14 | 76.6 |
| Msa0713380 | AT1G05630.2 | 32.394 | 284 | 146 | 8 | 368 | 609 | 652 | 931 | 6.53e-35 | 142 |
| Msa0713380 | AT1G05630.3 | 35.398 | 226 | 115 | 5 | 368 | 566 | 652 | 873 | 1.40e-34 | 140 |
| Msa0713380 | AT2G43900.1 | 30.986 | 284 | 149 | 8 | 366 | 607 | 656 | 934 | 1.91e-33 | 137 |
| Msa0713380 | AT2G43900.2 | 30.986 | 284 | 149 | 8 | 366 | 607 | 656 | 934 | 2.32e-33 | 137 |
| Msa0713380 | AT2G31830.1 | 32.117 | 274 | 146 | 8 | 368 | 610 | 661 | 925 | 2.59e-33 | 137 |
| Msa0713380 | AT2G31830.2 | 32.117 | 274 | 146 | 8 | 368 | 610 | 661 | 925 | 2.97e-33 | 137 |
| Msa0713380 | AT1G65580.1 | 30.035 | 283 | 150 | 7 | 368 | 607 | 619 | 896 | 4.84e-33 | 136 |
| Msa0713380 | AT1G65580.2 | 30.035 | 283 | 150 | 7 | 368 | 607 | 353 | 630 | 5.48e-33 | 135 |
| Msa0713380 | AT2G31830.3 | 34.071 | 226 | 118 | 5 | 368 | 566 | 661 | 882 | 2.04e-32 | 134 |
| Msa0713380 | AT1G05630.1 | 28.931 | 318 | 146 | 8 | 368 | 609 | 652 | 965 | 1.84e-30 | 128 |
| Msa0713380 | AT1G47510.4 | 31.633 | 196 | 110 | 8 | 404 | 591 | 84 | 263 | 1.45e-18 | 86.7 |
| Msa0713380 | AT1G47510.1 | 31.633 | 196 | 110 | 8 | 404 | 591 | 146 | 325 | 7.12e-18 | 85.9 |
| Msa0713380 | AT1G47510.2 | 36.134 | 119 | 64 | 4 | 480 | 591 | 149 | 262 | 1.03e-12 | 69.3 |
Find 127 sgRNAs with CRISPR-Local
Find 223 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATGATTGCTTCCCATTTC+TGG | 0.077647 | 5_1:-5545259 | None:intergenic |
| TCATCACTAATTTGCATTCT+TGG | 0.178641 | 5_1:-5544419 | None:intergenic |
| CCTGTTGGAGTTGGTCTTAT+GGG | 0.192645 | 5_1:+5545968 | Msa0713380:CDS |
| ACCTGTTGGAGTTGGTCTTA+TGG | 0.206704 | 5_1:+5545967 | Msa0713380:CDS |
| GAACAATTATTATTCAATTT+TGG | 0.217826 | 5_1:+5547793 | Msa0713380:three_prime_UTR |
| GTTTGTTCTCATCTGACTTC+TGG | 0.253654 | 5_1:+5546372 | Msa0713380:CDS |
| TTACATGTGAGGAAAGTTTA+TGG | 0.253967 | 5_1:+5545503 | Msa0713380:CDS |
| TTGTCCAAAGATAAAATAAC+TGG | 0.268124 | 5_1:-5547837 | None:intergenic |
| TGAGTCCCTTGTGTTCTAAA+TGG | 0.278238 | 5_1:-5544446 | None:intergenic |
| AGATTCGGAGGTTCGGAAAT+TGG | 0.279202 | 5_1:+5546656 | Msa0713380:CDS |
| GCATCATAGTTCCGGAGATT+TGG | 0.281629 | 5_1:+5545694 | Msa0713380:CDS |
| TCAAAGAATATATATGTTAT+AGG | 0.288900 | 5_1:+5547733 | Msa0713380:three_prime_UTR |
| AATGAGAATGCTTTCATATA+CGG | 0.299985 | 5_1:+5545638 | Msa0713380:CDS |
| CATCATAGTTCCGGAGATTT+GGG | 0.307084 | 5_1:+5545695 | Msa0713380:CDS |
| TCTTGTGCCTCACAGTTTCC+AGG | 0.330792 | 5_1:+5545181 | Msa0713380:intron |
| GTAAATATCACTTGGTTCTT+CGG | 0.331532 | 5_1:-5544883 | None:intergenic |
| CATTCAGTGGAACTACTTCC+TGG | 0.351079 | 5_1:-5545199 | None:intergenic |
| TCTAACGAATCAACTACTTT+AGG | 0.360222 | 5_1:-5545746 | None:intergenic |
| TTTATGGTATTGATCTTGAT+TGG | 0.371531 | 5_1:+5545519 | Msa0713380:CDS |
| TTAAGTAGTTCAGCTAGAAT+TGG | 0.375907 | 5_1:+5545605 | Msa0713380:CDS |
| ATATTCTCAACTCAAATATC+AGG | 0.376314 | 5_1:+5544473 | Msa0713380:CDS |
| ATCTTTGGACAATAAACGTC+AGG | 0.377848 | 5_1:+5547848 | Msa0713380:three_prime_UTR |
| TGGGAATCTATGTATCTGTT+TGG | 0.377949 | 5_1:+5545900 | Msa0713380:CDS |
| GAAAGTAACATAATTAGTAT+AGG | 0.383320 | 5_1:+5545473 | Msa0713380:CDS |
| ACCAAGAAAATTGAACTAAC+TGG | 0.385102 | 5_1:-5547477 | None:intergenic |
| ATTTGCATTCTTGGTTGCTT+AGG | 0.387840 | 5_1:-5544410 | None:intergenic |
| TTATTATATGACTATCTCAT+TGG | 0.388551 | 5_1:-5547693 | None:intergenic |
| TCAGGGTAGCAATTGGATCT+TGG | 0.401753 | 5_1:+5544805 | Msa0713380:intron |
| TGAGTCAGTTACGTTACATA+AGG | 0.402055 | 5_1:+5547665 | Msa0713380:three_prime_UTR |
| AAACGTTCGCATCATAGTTC+CGG | 0.406803 | 5_1:+5545686 | Msa0713380:CDS |
| CCATCATCATCTTGGTTCTC+AGG | 0.407822 | 5_1:-5545821 | None:intergenic |
| ATAATACACCTATCCAGAAA+TGG | 0.408581 | 5_1:+5545246 | Msa0713380:CDS |
| AAAGTAACATAATTAGTATA+GGG | 0.408651 | 5_1:+5545474 | Msa0713380:CDS |
| CGTGTTGGGCATGTATTTGA+TGG | 0.413909 | 5_1:+5547186 | Msa0713380:CDS |
| GAGTCAGTTACGTTACATAA+GGG | 0.416582 | 5_1:+5547666 | Msa0713380:three_prime_UTR |
| CGCTTAATCCATCATCATCT+TGG | 0.418248 | 5_1:-5545829 | None:intergenic |
| CATTGCGTCTAACGGACGTT+CGG | 0.419351 | 5_1:-5545543 | None:intergenic |
| ATTGGATCTTGGAATGTTGC+TGG | 0.427032 | 5_1:+5544816 | Msa0713380:CDS |
| TTAATTTCATATTTGTAAGT+TGG | 0.431471 | 5_1:-5547237 | None:intergenic |
| TCGCTAAAATCATTCACCTT+AGG | 0.432369 | 5_1:-5544242 | None:intergenic |
| CCCATAAGACCAACTCCAAC+AGG | 0.442442 | 5_1:-5545968 | None:intergenic |
| AGTTGGTCTTATGGGCTACA+TGG | 0.444671 | 5_1:+5545976 | Msa0713380:CDS |
| CCTTCATTGTTTCAAGTCAA+AGG | 0.449963 | 5_1:-5544075 | None:intergenic |
| CGAATATTGTGGCTAGGAAA+AGG | 0.450823 | 5_1:+5547402 | Msa0713380:CDS |
| ATTAATTCAGATAGATATGT+TGG | 0.451212 | 5_1:+5547255 | Msa0713380:CDS |
| GGGAATCTATGTATCTGTTT+GGG | 0.451736 | 5_1:+5545901 | Msa0713380:CDS |
| CTGAATGCTGGAAATGTACT+AGG | 0.452408 | 5_1:+5545215 | Msa0713380:CDS |
| TTCATATACGGTGGTGGTGG+TGG | 0.453504 | 5_1:+5545650 | Msa0713380:CDS |
| TAAGCAATGAATTGCGTGTT+GGG | 0.453778 | 5_1:+5547172 | Msa0713380:CDS |
| TCGAATCAGTATGTTAGATT+CGG | 0.454114 | 5_1:+5546641 | Msa0713380:CDS |
| ATATACGGTGGTGGTGGTGG+TGG | 0.456749 | 5_1:+5545653 | Msa0713380:CDS |
| GTATTTGATGGATGGAAAGA+AGG | 0.466341 | 5_1:+5547198 | Msa0713380:CDS |
| ATTGCTTCCCATTTCTGGAT+AGG | 0.468019 | 5_1:-5545254 | None:intergenic |
| CCACAGCGCGCCACCTTCGC+CGG | 0.468038 | 5_1:+5545328 | Msa0713380:CDS |
| TCATCTGACTTCTGGTACAA+AGG | 0.470086 | 5_1:+5546380 | Msa0713380:CDS |
| TCATCATTCAGCATATCAAT+TGG | 0.473256 | 5_1:-5545407 | None:intergenic |
| GTATGTTAGATTCGGAGGTT+CGG | 0.473895 | 5_1:+5546649 | Msa0713380:CDS |
| AAAGTTTCACCTGTTGGAGT+TGG | 0.475998 | 5_1:+5545959 | Msa0713380:CDS |
| ATTGCGTCTAACGGACGTTC+GGG | 0.483185 | 5_1:-5545542 | None:intergenic |
| TCGAATTATCAGCAAGCAAA+TGG | 0.488062 | 5_1:+5545877 | Msa0713380:CDS |
| AATTTGAAAGTTTCACCTGT+TGG | 0.489228 | 5_1:+5545953 | Msa0713380:CDS |
| TAATACACCTATCCAGAAAT+GGG | 0.489685 | 5_1:+5545247 | Msa0713380:CDS |
| TGAACTAATGAATTATGATC+AGG | 0.491564 | 5_1:+5546698 | Msa0713380:CDS |
| GAGAACAAACAAAGCACATA+CGG | 0.492200 | 5_1:-5546359 | None:intergenic |
| CCTTTGACTTGAAACAATGA+AGG | 0.495124 | 5_1:+5544075 | Msa0713380:exon |
| ATTGCAATTAATTACCATGC+AGG | 0.498674 | 5_1:-5547312 | None:intergenic |
| TTGGTGAGATTCCAAAAGAA+GGG | 0.500872 | 5_1:+5547274 | Msa0713380:CDS |
| ATTTGTGACATTGCGTCTAA+CGG | 0.506290 | 5_1:-5545551 | None:intergenic |
| CAATAACGAGCCCAAATCTC+CGG | 0.506916 | 5_1:-5545705 | None:intergenic |
| AAGATAAATTAATTGAACAT+TGG | 0.507885 | 5_1:+5547611 | Msa0713380:three_prime_UTR |
| CTGACTTCTGGTACAAAGGA+TGG | 0.510046 | 5_1:+5546384 | Msa0713380:CDS |
| TGCTCAGTATATAAATACTA+AGG | 0.510156 | 5_1:+5544667 | Msa0713380:CDS |
| GAAGTAGTTCCACTGAATGC+TGG | 0.510491 | 5_1:+5545203 | Msa0713380:CDS |
| CCGGCGAAGGTGGCGCGCTG+TGG | 0.516401 | 5_1:-5545328 | None:intergenic |
| ATGGCTTAATATTAAGCCTA+AGG | 0.517224 | 5_1:+5544226 | Msa0713380:CDS |
| CCTGAGAACCAAGATGATGA+TGG | 0.520345 | 5_1:+5545821 | Msa0713380:CDS |
| GTTGGTGAGATTCCAAAAGA+AGG | 0.521146 | 5_1:+5547273 | Msa0713380:CDS |
| CTAAGCAATGAATTGCGTGT+TGG | 0.528172 | 5_1:+5547171 | Msa0713380:CDS |
| AGGATCTTGATATTGATGAC+TGG | 0.535310 | 5_1:+5544853 | Msa0713380:CDS |
| CTTAATACTCTCCGCAACTT+CGG | 0.537866 | 5_1:-5545587 | None:intergenic |
| AATAAAGCTCACTCGTGCGA+TGG | 0.543502 | 5_1:-5546498 | None:intergenic |
| ATAAAGCTCACTCGTGCGAT+GGG | 0.545204 | 5_1:-5546497 | None:intergenic |
| GTTCTCAACACCGGCGAAGG+TGG | 0.554746 | 5_1:-5545338 | None:intergenic |
| TTTGAATGATGATGATGAGA+TGG | 0.559090 | 5_1:-5543891 | None:intergenic |
| ATGTATCTGTTTGGGTGCAG+AGG | 0.559123 | 5_1:+5545909 | Msa0713380:CDS |
| TATGCTGAATGATGAGCTCA+TGG | 0.564953 | 5_1:+5545415 | Msa0713380:CDS |
| GCTTTCATATACGGTGGTGG+TGG | 0.567761 | 5_1:+5545647 | Msa0713380:CDS |
| TTGGGCATGTATTTGATGGA+TGG | 0.569025 | 5_1:+5547190 | Msa0713380:CDS |
| AATCAGTATGTTAGATTCGG+AGG | 0.570836 | 5_1:+5546644 | Msa0713380:CDS |
| TTGATTCAAATCCGAAGTTG+CGG | 0.571082 | 5_1:+5545576 | Msa0713380:CDS |
| AGTCAGTTACGTTACATAAG+GGG | 0.575484 | 5_1:+5547667 | Msa0713380:three_prime_UTR |
| GAAGTTCTCAACACCGGCGA+AGG | 0.576277 | 5_1:-5545341 | None:intergenic |
| GAAACAATGAAGGGAAGAAG+AGG | 0.580298 | 5_1:+5544085 | Msa0713380:exon |
| TATCTGTTTGGGTGCAGAGG+AGG | 0.583884 | 5_1:+5545912 | Msa0713380:CDS |
| AATTATCAGCAAGCAAATGG+TGG | 0.587320 | 5_1:+5545880 | Msa0713380:CDS |
| CTTTGACTTGAAACAATGAA+GGG | 0.589740 | 5_1:+5544076 | Msa0713380:exon |
| AGTACATTTCCAGCATTCAG+TGG | 0.590823 | 5_1:-5545212 | None:intergenic |
| GTTGGTCTTATGGGCTACAT+GGG | 0.595449 | 5_1:+5545977 | Msa0713380:CDS |
| AGAACAAACAAAGCACATAC+GGG | 0.598184 | 5_1:-5546358 | None:intergenic |
| TATTTGATGGATGGAAAGAA+GGG | 0.598578 | 5_1:+5547199 | Msa0713380:CDS |
| ATCTGAGATGTTATCTGATG+AGG | 0.598698 | 5_1:+5545775 | Msa0713380:CDS |
| TGTGATCGAATATTGTGGCT+AGG | 0.603815 | 5_1:+5547396 | Msa0713380:CDS |
| TCTTTGGACAATAAACGTCA+GGG | 0.606513 | 5_1:+5547849 | Msa0713380:three_prime_UTR |
| ATTATCAGCAAGCAAATGGT+GGG | 0.612348 | 5_1:+5545881 | Msa0713380:CDS |
| TACAAAACAAGACACAGAAG+AGG | 0.617623 | 5_1:+5544626 | Msa0713380:CDS |
| TATGGGCTACATGGGAAACA+AGG | 0.618111 | 5_1:+5545985 | Msa0713380:CDS |
| TCTGAGATGTTATCTGATGA+GGG | 0.618464 | 5_1:+5545776 | Msa0713380:CDS |
| TTCGGAGGTTCGGAAATTGG+TGG | 0.621782 | 5_1:+5546659 | Msa0713380:CDS |
| TCAATATCAAGATCCTCAGA+TGG | 0.622649 | 5_1:-5544846 | None:intergenic |
| TCACAACCGCAACTTGCACA+AGG | 0.628072 | 5_1:-5543803 | None:intergenic |
| TGGACAATAAACGTCAGGGT+GGG | 0.629831 | 5_1:+5547853 | Msa0713380:three_prime_UTR |
| TGGAAATGTACTAGGAGCAG+AGG | 0.643675 | 5_1:+5545223 | Msa0713380:CDS |
| GTCAGTTACGTTACATAAGG+GGG | 0.646220 | 5_1:+5547668 | Msa0713380:three_prime_UTR |
| AATGCTTTCATATACGGTGG+TGG | 0.651242 | 5_1:+5545644 | Msa0713380:CDS |
| GCAGAAGAAGTTCTCAACAC+CGG | 0.655380 | 5_1:-5545347 | None:intergenic |
| TGGTGAGATTCCAAAAGAAG+GGG | 0.655564 | 5_1:+5547275 | Msa0713380:CDS |
| GATAGTCCATTTAGAACACA+AGG | 0.664992 | 5_1:+5544440 | Msa0713380:CDS |
| GAAACTGAGAGTGAAGATGA+TGG | 0.668913 | 5_1:+5544281 | Msa0713380:CDS |
| TGCTGGAAGACATCCATCTG+AGG | 0.669046 | 5_1:+5544833 | Msa0713380:CDS |
| ATATAAATACTAAGGAAGTG+AGG | 0.671109 | 5_1:+5544675 | Msa0713380:CDS |
| TAGGGAATGATTTACATGTG+AGG | 0.672907 | 5_1:+5545492 | Msa0713380:CDS |
| GAGAATGCTTTCATATACGG+TGG | 0.674781 | 5_1:+5545641 | Msa0713380:CDS |
| TGTCCAAAGATAAAATAACT+GGG | 0.678215 | 5_1:-5547836 | None:intergenic |
| GCGCGACGAAATCACATGCG+AGG | 0.683866 | 5_1:+5545849 | Msa0713380:CDS |
| TTGGACAATAAACGTCAGGG+TGG | 0.688024 | 5_1:+5547852 | Msa0713380:three_prime_UTR |
| GCAGGTGTGATCGAATATTG+TGG | 0.699199 | 5_1:+5547391 | Msa0713380:intron |
| ATAGTCCATTTAGAACACAA+GGG | 0.775380 | 5_1:+5544441 | Msa0713380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAATTAATTATATAATCT+AGG | - | chr5_1:5547129-5547148 | None:intergenic | 10.0% |
| !! | TTATAAACGTACAAAAAAAT+GGG | - | chr5_1:5543921-5543940 | None:intergenic | 15.0% |
| !! | ATTATAAACGTACAAAAAAA+TGG | - | chr5_1:5543922-5543941 | None:intergenic | 15.0% |
| !! | ATAATGATAAATCATAACTT+TGG | + | chr5_1:5544775-5544794 | Msa0713380:intron | 15.0% |
| !!! | AAATTGTAAATTCTTTTGTT+CGG | + | chr5_1:5544928-5544947 | Msa0713380:intron | 15.0% |
| !! | AAAGTAACATAATTAGTATA+GGG | + | chr5_1:5545474-5545493 | Msa0713380:CDS | 15.0% |
| !!! | CTTTTATTTACATATATGAT+TGG | + | chr5_1:5546271-5546290 | Msa0713380:intron | 15.0% |
| !! | TTATTTCATAAAATTTGCAA+GGG | - | chr5_1:5546540-5546559 | None:intergenic | 15.0% |
| !! | TTAATTTCATATTTGTAAGT+TGG | - | chr5_1:5547240-5547259 | None:intergenic | 15.0% |
| !! | AAGATAAATTAATTGAACAT+TGG | + | chr5_1:5547611-5547630 | Msa0713380:three_prime_UTR | 15.0% |
| !! | TCAAAGAATATATATGTTAT+AGG | + | chr5_1:5547733-5547752 | Msa0713380:three_prime_UTR | 15.0% |
| !!! | GAACAATTATTATTCAATTT+TGG | + | chr5_1:5547793-5547812 | Msa0713380:three_prime_UTR | 15.0% |
| !!! | ATTTTGTGTCTTTTTCTATT+TGG | + | chr5_1:5543852-5543871 | Msa0713380:five_prime_UTR | 20.0% |
| !! | AAAGAACAAGTTCTTAAATA+TGG | - | chr5_1:5544003-5544022 | None:intergenic | 20.0% |
| !!! | AAGCAACTGTTTTTTTTATA+AGG | + | chr5_1:5544039-5544058 | Msa0713380:intron | 20.0% |
| !! | ATGATCATTCAAAATAATCA+TGG | - | chr5_1:5544151-5544170 | None:intergenic | 20.0% |
| !!! | TTCTTTCTTTTTCATTGAAA+TGG | - | chr5_1:5544511-5544530 | None:intergenic | 20.0% |
| !!! | TTCAGATGAATCTTTTAAAA+AGG | + | chr5_1:5544601-5544620 | Msa0713380:intron | 20.0% |
| !!! | TCAGATGAATCTTTTAAAAA+GGG | + | chr5_1:5544602-5544621 | Msa0713380:intron | 20.0% |
| !!! | CAAGTGATATTTACATTTTT+GGG | + | chr5_1:5544892-5544911 | Msa0713380:CDS | 20.0% |
| !!! | CCATTTTATTATTCAAGTTT+AGG | - | chr5_1:5545036-5545055 | None:intergenic | 20.0% |
| !! | CCTAAACTTGAATAATAAAA+TGG | + | chr5_1:5545033-5545052 | Msa0713380:intron | 20.0% |
| !! | AAGTTATTTACAGAAAACTT+TGG | - | chr5_1:5545149-5545168 | None:intergenic | 20.0% |
| !! | GAAAGTAACATAATTAGTAT+AGG | + | chr5_1:5545473-5545492 | Msa0713380:CDS | 20.0% |
| !! | CTTATTTCATAAAATTTGCA+AGG | - | chr5_1:5546541-5546560 | None:intergenic | 20.0% |
| !! | TTTCCCTTAATATTTAAACT+TGG | + | chr5_1:5546769-5546788 | Msa0713380:intron | 20.0% |
| !! | AGACCAAGTTTAAATATTAA+GGG | - | chr5_1:5546775-5546794 | None:intergenic | 20.0% |
| !! | TCAAGTAAAATAAAAGGTTT+GGG | - | chr5_1:5546832-5546851 | None:intergenic | 20.0% |
| !! | TTCAAGTAAAATAAAAGGTT+TGG | - | chr5_1:5546833-5546852 | None:intergenic | 20.0% |
| !!! | AACCTTTTATTTTACTTGAA+TGG | + | chr5_1:5546833-5546852 | Msa0713380:intron | 20.0% |
| !!! | ACCTTTTATTTTACTTGAAT+GGG | + | chr5_1:5546834-5546853 | Msa0713380:intron | 20.0% |
| !!! | CTTTTATCTTATTATAGGTA+GGG | - | chr5_1:5546898-5546917 | None:intergenic | 20.0% |
| !!! | ACAACCTTTTATCTTATTAT+AGG | - | chr5_1:5546903-5546922 | None:intergenic | 20.0% |
| !! | TCAAATTTACATAGTAAGAA+AGG | - | chr5_1:5546952-5546971 | None:intergenic | 20.0% |
| !!! | TTGATATTTTATTCCTCATA+AGG | + | chr5_1:5546968-5546987 | Msa0713380:intron | 20.0% |
| !! | TAGATAACAAATTATAGATG+TGG | - | chr5_1:5547037-5547056 | None:intergenic | 20.0% |
| !! | ATTAATTCAGATAGATATGT+TGG | + | chr5_1:5547255-5547274 | Msa0713380:CDS | 20.0% |
| !!! | GACTATGAATATTAATTTGT+TGG | + | chr5_1:5547343-5547362 | Msa0713380:intron | 20.0% |
| !! | ATAAAATTATATATGCATGC+AGG | + | chr5_1:5547373-5547392 | Msa0713380:intron | 20.0% |
| !! | TTATTATATGACTATCTCAT+TGG | - | chr5_1:5547696-5547715 | None:intergenic | 20.0% |
| !! | TTTTCTATTTGGTACTAAAG+AGG | + | chr5_1:5543863-5543882 | Msa0713380:five_prime_UTR | 25.0% |
| !!! | TGCTGATTTGATTTTATTGT+AGG | + | chr5_1:5544175-5544194 | Msa0713380:intron | 25.0% |
| !! | TGATTTTATTGTAGGCTTTT+TGG | + | chr5_1:5544183-5544202 | Msa0713380:intron | 25.0% |
| ! | ATATTCTCAACTCAAATATC+AGG | + | chr5_1:5544473-5544492 | Msa0713380:CDS | 25.0% |
| !!! | TCAAATCACAGTTCTAAAAA+TGG | - | chr5_1:5544561-5544580 | None:intergenic | 25.0% |
| ! | TGCTCAGTATATAAATACTA+AGG | + | chr5_1:5544667-5544686 | Msa0713380:CDS | 25.0% |
| ! | ATATAAATACTAAGGAAGTG+AGG | + | chr5_1:5544675-5544694 | Msa0713380:CDS | 25.0% |
| ! | ATGCTATACTATACATAACT+AGG | - | chr5_1:5544713-5544732 | None:intergenic | 25.0% |
| !!! | ATAACTTTGGTTTTTCTTCA+GGG | + | chr5_1:5544788-5544807 | Msa0713380:intron | 25.0% |
| ! | CCAAAAATGTAAATATCACT+TGG | - | chr5_1:5544894-5544913 | None:intergenic | 25.0% |
| !! | CCAAGTGATATTTACATTTT+TGG | + | chr5_1:5544891-5544910 | Msa0713380:CDS | 25.0% |
| ! | ACTCATAGTTTACTGATAAA+TGG | + | chr5_1:5544955-5544974 | Msa0713380:intron | 25.0% |
| ! | CTCATAGTTTACTGATAAAT+GGG | + | chr5_1:5544956-5544975 | Msa0713380:intron | 25.0% |
| ! | CTGTAAATAACTTTCAATTG+TGG | + | chr5_1:5545156-5545175 | Msa0713380:intron | 25.0% |
| !!! | TTTATGGTATTGATCTTGAT+TGG | + | chr5_1:5545519-5545538 | Msa0713380:CDS | 25.0% |
| ! | AATGAGAATGCTTTCATATA+CGG | + | chr5_1:5545638-5545657 | Msa0713380:CDS | 25.0% |
| ! | GAGATGTTTCACATTAAATT+AGG | + | chr5_1:5546011-5546030 | Msa0713380:intron | 25.0% |
| ! | TTCCACATTAATTGTTAACT+AGG | + | chr5_1:5546042-5546061 | Msa0713380:intron | 25.0% |
| ! | ATAAGTTAACACAAGTTGTT+AGG | - | chr5_1:5546571-5546590 | None:intergenic | 25.0% |
| ! | TGAACTAATGAATTATGATC+AGG | + | chr5_1:5546698-5546717 | Msa0713380:CDS | 25.0% |
| !! | AAAGTTATGCATATTTTGCA+AGG | - | chr5_1:5546745-5546764 | None:intergenic | 25.0% |
| ! | GAGACCAAGTTTAAATATTA+AGG | - | chr5_1:5546776-5546795 | None:intergenic | 25.0% |
| ! | ACCCATTCAAGTAAAATAAA+AGG | - | chr5_1:5546838-5546857 | None:intergenic | 25.0% |
| !! | CCTTTTATCTTATTATAGGT+AGG | - | chr5_1:5546899-5546918 | None:intergenic | 25.0% |
| ! | CCTACCTATAATAAGATAAA+AGG | + | chr5_1:5546896-5546915 | Msa0713380:intron | 25.0% |
| ! | TGTCCAAAGATAAAATAACT+GGG | - | chr5_1:5547839-5547858 | None:intergenic | 25.0% |
| ! | TTGTCCAAAGATAAAATAAC+TGG | - | chr5_1:5547840-5547859 | None:intergenic | 25.0% |
| ! | TTTGAATGATGATGATGAGA+TGG | - | chr5_1:5543894-5543913 | None:intergenic | 30.0% |
| !! | CTTTGACTTGAAACAATGAA+GGG | + | chr5_1:5544076-5544095 | Msa0713380:exon | 30.0% |
| !!! | CATTTTTTCATCACAATGGA+AGG | - | chr5_1:5544209-5544228 | None:intergenic | 30.0% |
| CTTCCATTGTGATGAAAAAA+TGG | + | chr5_1:5544207-5544226 | Msa0713380:CDS | 30.0% | |
| !!! | AAGCCATTTTTTCATCACAA+TGG | - | chr5_1:5544213-5544232 | None:intergenic | 30.0% |
| ATGGCTTAATATTAAGCCTA+AGG | + | chr5_1:5544226-5544245 | Msa0713380:CDS | 30.0% | |
| ! | TCATCACTAATTTGCATTCT+TGG | - | chr5_1:5544422-5544441 | None:intergenic | 30.0% |
| ! | ATAGTCCATTTAGAACACAA+GGG | + | chr5_1:5544441-5544460 | Msa0713380:CDS | 30.0% |
| !!! | CATAACTTTGGTTTTTCTTC+AGG | + | chr5_1:5544787-5544806 | Msa0713380:intron | 30.0% |
| ! | GTAAATATCACTTGGTTCTT+CGG | - | chr5_1:5544886-5544905 | None:intergenic | 30.0% |
| ! | TCAAGGGTAATTTTGTAAAC+TGG | + | chr5_1:5544988-5545007 | Msa0713380:intron | 30.0% |
| GAACAAATGATATTTGATCG+CGG | - | chr5_1:5545107-5545126 | None:intergenic | 30.0% | |
| ATAATACACCTATCCAGAAA+TGG | + | chr5_1:5545246-5545265 | Msa0713380:CDS | 30.0% | |
| TAATACACCTATCCAGAAAT+GGG | + | chr5_1:5545247-5545266 | Msa0713380:CDS | 30.0% | |
| TCATCATTCAGCATATCAAT+TGG | - | chr5_1:5545410-5545429 | None:intergenic | 30.0% | |
| TTACATGTGAGGAAAGTTTA+TGG | + | chr5_1:5545503-5545522 | Msa0713380:CDS | 30.0% | |
| TTAAGTAGTTCAGCTAGAAT+TGG | + | chr5_1:5545605-5545624 | Msa0713380:CDS | 30.0% | |
| TCTAACGAATCAACTACTTT+AGG | - | chr5_1:5545749-5545768 | None:intergenic | 30.0% | |
| AATTTGAAAGTTTCACCTGT+TGG | + | chr5_1:5545953-5545972 | Msa0713380:CDS | 30.0% | |
| AGCCTAGTTAACAATTAATG+TGG | - | chr5_1:5546047-5546066 | None:intergenic | 30.0% | |
| CAAATCATCATGCTGAATAA+AGG | + | chr5_1:5546148-5546167 | Msa0713380:intron | 30.0% | |
| ! | TTGTTAACAGTCAGATTTTC+TGG | + | chr5_1:5546601-5546620 | Msa0713380:intron | 30.0% |
| TCGAATCAGTATGTTAGATT+CGG | + | chr5_1:5546641-5546660 | Msa0713380:CDS | 30.0% | |
| AGTAAAATAAAAGGTTTGGG+TGG | - | chr5_1:5546829-5546848 | None:intergenic | 30.0% | |
| !!! | TATAGGTAGGGTTTTTTATG+TGG | - | chr5_1:5546886-5546905 | None:intergenic | 30.0% |
| AATAGCAATAGTTCCTTATG+AGG | - | chr5_1:5546984-5547003 | None:intergenic | 30.0% | |
| ! | TATTTGATGGATGGAAAGAA+GGG | + | chr5_1:5547199-5547218 | Msa0713380:CDS | 30.0% |
| ATTGCAATTAATTACCATGC+AGG | - | chr5_1:5547315-5547334 | None:intergenic | 30.0% | |
| ! | ACCAGTTAGTTCAATTTTCT+TGG | + | chr5_1:5547476-5547495 | Msa0713380:CDS | 30.0% |
| ACCAAGAAAATTGAACTAAC+TGG | - | chr5_1:5547480-5547499 | None:intergenic | 30.0% | |
| AAAAATTGACCATCTTCATC+AGG | - | chr5_1:5547585-5547604 | None:intergenic | 30.0% | |
| !! | TGTCCCAGTTATTTTATCTT+TGG | + | chr5_1:5547833-5547852 | Msa0713380:three_prime_UTR | 30.0% |
| ! | CCTTCATTGTTTCAAGTCAA+AGG | - | chr5_1:5544078-5544097 | None:intergenic | 35.0% |
| !! | CCTTTGACTTGAAACAATGA+AGG | + | chr5_1:5544075-5544094 | Msa0713380:exon | 35.0% |
| AAGAAGAGGAAAAAGATCAG+AGG | + | chr5_1:5544099-5544118 | Msa0713380:CDS | 35.0% | |
| TCGCTAAAATCATTCACCTT+AGG | - | chr5_1:5544245-5544264 | None:intergenic | 35.0% | |
| ATTTGCATTCTTGGTTGCTT+AGG | - | chr5_1:5544413-5544432 | None:intergenic | 35.0% | |
| ! | GATAGTCCATTTAGAACACA+AGG | + | chr5_1:5544440-5544459 | Msa0713380:CDS | 35.0% |
| TACAAAACAAGACACAGAAG+AGG | + | chr5_1:5544626-5544645 | Msa0713380:CDS | 35.0% | |
| AATACTAAGGAAGTGAGGTA+TGG | + | chr5_1:5544680-5544699 | Msa0713380:intron | 35.0% | |
| ! | TTTTTCTTCAGGGTAGCAAT+TGG | + | chr5_1:5544798-5544817 | Msa0713380:intron | 35.0% |
| TCAATATCAAGATCCTCAGA+TGG | - | chr5_1:5544849-5544868 | None:intergenic | 35.0% | |
| ! | AGGATCTTGATATTGATGAC+TGG | + | chr5_1:5544853-5544872 | Msa0713380:CDS | 35.0% |
| TTACTGATAAATGGGCAGTA+CGG | + | chr5_1:5544964-5544983 | Msa0713380:intron | 35.0% | |
| TAATGATTGCTTCCCATTTC+TGG | - | chr5_1:5545262-5545281 | None:intergenic | 35.0% | |
| TAGGGAATGATTTACATGTG+AGG | + | chr5_1:5545492-5545511 | Msa0713380:CDS | 35.0% | |
| ATTTGTGACATTGCGTCTAA+CGG | - | chr5_1:5545554-5545573 | None:intergenic | 35.0% | |
| TTGATTCAAATCCGAAGTTG+CGG | + | chr5_1:5545576-5545595 | Msa0713380:CDS | 35.0% | |
| ! | ATCTGAGATGTTATCTGATG+AGG | + | chr5_1:5545775-5545794 | Msa0713380:CDS | 35.0% |
| ! | TCTGAGATGTTATCTGATGA+GGG | + | chr5_1:5545776-5545795 | Msa0713380:CDS | 35.0% |
| TCGAATTATCAGCAAGCAAA+TGG | + | chr5_1:5545877-5545896 | Msa0713380:CDS | 35.0% | |
| AATTATCAGCAAGCAAATGG+TGG | + | chr5_1:5545880-5545899 | Msa0713380:CDS | 35.0% | |
| ATTATCAGCAAGCAAATGGT+GGG | + | chr5_1:5545881-5545900 | Msa0713380:CDS | 35.0% | |
| TGGGAATCTATGTATCTGTT+TGG | + | chr5_1:5545900-5545919 | Msa0713380:CDS | 35.0% | |
| GGGAATCTATGTATCTGTTT+GGG | + | chr5_1:5545901-5545920 | Msa0713380:CDS | 35.0% | |
| TCATCATGCTGAATAAAGGT+CGG | + | chr5_1:5546152-5546171 | Msa0713380:intron | 35.0% | |
| GTTGAATTGAACTGATACAC+TGG | - | chr5_1:5546188-5546207 | None:intergenic | 35.0% | |
| ACACATTTCTCAATGATGCA+GGG | + | chr5_1:5546303-5546322 | Msa0713380:intron | 35.0% | |
| AGAACAAACAAAGCACATAC+GGG | - | chr5_1:5546361-5546380 | None:intergenic | 35.0% | |
| GAGAACAAACAAAGCACATA+CGG | - | chr5_1:5546362-5546381 | None:intergenic | 35.0% | |
| !!! | AACAGTCAGATTTTCTGGTT+CGG | + | chr5_1:5546606-5546625 | Msa0713380:intron | 35.0% |
| AATCAGTATGTTAGATTCGG+AGG | + | chr5_1:5546644-5546663 | Msa0713380:CDS | 35.0% | |
| ! | AATTGGTGGCTCAAAAAAAG+TGG | + | chr5_1:5546673-5546692 | Msa0713380:CDS | 35.0% |
| ! | TGCATATTTTGCAAGGTTTG+TGG | - | chr5_1:5546738-5546757 | None:intergenic | 35.0% |
| TAAGCAATGAATTGCGTGTT+GGG | + | chr5_1:5547172-5547191 | Msa0713380:CDS | 35.0% | |
| ! | GTATTTGATGGATGGAAAGA+AGG | + | chr5_1:5547198-5547217 | Msa0713380:CDS | 35.0% |
| TTGGTGAGATTCCAAAAGAA+GGG | + | chr5_1:5547274-5547293 | Msa0713380:CDS | 35.0% | |
| !!! | CTTTTTTTCTCCCCTTCTTT+TGG | - | chr5_1:5547288-5547307 | None:intergenic | 35.0% |
| TCTTCATCAGGAAAAATCTC+AGG | - | chr5_1:5547573-5547592 | None:intergenic | 35.0% | |
| ! | GAGATTTTTCCTGATGAAGA+TGG | + | chr5_1:5547573-5547592 | Msa0713380:CDS | 35.0% |
| TGAGTCAGTTACGTTACATA+AGG | + | chr5_1:5547665-5547684 | Msa0713380:three_prime_UTR | 35.0% | |
| GAGTCAGTTACGTTACATAA+GGG | + | chr5_1:5547666-5547685 | Msa0713380:three_prime_UTR | 35.0% | |
| AGTCAGTTACGTTACATAAG+GGG | + | chr5_1:5547667-5547686 | Msa0713380:three_prime_UTR | 35.0% | |
| ATCTTTGGACAATAAACGTC+AGG | + | chr5_1:5547848-5547867 | Msa0713380:three_prime_UTR | 35.0% | |
| TCTTTGGACAATAAACGTCA+GGG | + | chr5_1:5547849-5547868 | Msa0713380:three_prime_UTR | 35.0% | |
| ! | TGTTTTCCTTGTGCAAGTTG+CGG | + | chr5_1:5543797-5543816 | Msa0713380:five_prime_UTR | 40.0% |
| GAAACAATGAAGGGAAGAAG+AGG | + | chr5_1:5544085-5544104 | Msa0713380:exon | 40.0% | |
| GAAACTGAGAGTGAAGATGA+TGG | + | chr5_1:5544281-5544300 | Msa0713380:CDS | 40.0% | |
| ! | TGAGTCCCTTGTGTTCTAAA+TGG | - | chr5_1:5544449-5544468 | None:intergenic | 40.0% |
| CTCAACTCAAATATCAGGCA+AGG | + | chr5_1:5544478-5544497 | Msa0713380:intron | 40.0% | |
| ATTGGATCTTGGAATGTTGC+TGG | + | chr5_1:5544816-5544835 | Msa0713380:CDS | 40.0% | |
| !! | TACTGAAGCCGTTTTGTAGT+CGG | + | chr5_1:5545056-5545075 | Msa0713380:intron | 40.0% |
| AGTACATTTCCAGCATTCAG+TGG | - | chr5_1:5545215-5545234 | None:intergenic | 40.0% | |
| CTGAATGCTGGAAATGTACT+AGG | + | chr5_1:5545215-5545234 | Msa0713380:CDS | 40.0% | |
| ! | ATTGCTTCCCATTTCTGGAT+AGG | - | chr5_1:5545257-5545276 | None:intergenic | 40.0% |
| TATGCTGAATGATGAGCTCA+TGG | + | chr5_1:5545415-5545434 | Msa0713380:CDS | 40.0% | |
| CTTAATACTCTCCGCAACTT+CGG | - | chr5_1:5545590-5545609 | None:intergenic | 40.0% | |
| GAGAATGCTTTCATATACGG+TGG | + | chr5_1:5545641-5545660 | Msa0713380:CDS | 40.0% | |
| AATGCTTTCATATACGGTGG+TGG | + | chr5_1:5545644-5545663 | Msa0713380:CDS | 40.0% | |
| AAACGTTCGCATCATAGTTC+CGG | + | chr5_1:5545686-5545705 | Msa0713380:CDS | 40.0% | |
| CATCATAGTTCCGGAGATTT+GGG | + | chr5_1:5545695-5545714 | Msa0713380:CDS | 40.0% | |
| CGCTTAATCCATCATCATCT+TGG | - | chr5_1:5545832-5545851 | None:intergenic | 40.0% | |
| AAAGTTTCACCTGTTGGAGT+TGG | + | chr5_1:5545959-5545978 | Msa0713380:CDS | 40.0% | |
| ATATCACTAGTGCACGAGTT+TGG | - | chr5_1:5546243-5546262 | None:intergenic | 40.0% | |
| GACACATTTCTCAATGATGC+AGG | + | chr5_1:5546302-5546321 | Msa0713380:intron | 40.0% | |
| GTTTGTTCTCATCTGACTTC+TGG | + | chr5_1:5546372-5546391 | Msa0713380:CDS | 40.0% | |
| TCATCTGACTTCTGGTACAA+AGG | + | chr5_1:5546380-5546399 | Msa0713380:CDS | 40.0% | |
| GTATGTTAGATTCGGAGGTT+CGG | + | chr5_1:5546649-5546668 | Msa0713380:CDS | 40.0% | |
| CTAAGCAATGAATTGCGTGT+TGG | + | chr5_1:5547171-5547190 | Msa0713380:CDS | 40.0% | |
| TTGGGCATGTATTTGATGGA+TGG | + | chr5_1:5547190-5547209 | Msa0713380:CDS | 40.0% | |
| ! | GTTGGTGAGATTCCAAAAGA+AGG | + | chr5_1:5547273-5547292 | Msa0713380:CDS | 40.0% |
| TGGTGAGATTCCAAAAGAAG+GGG | + | chr5_1:5547275-5547294 | Msa0713380:CDS | 40.0% | |
| AGAAAAAAAGAGCTCCTGCA+TGG | + | chr5_1:5547298-5547317 | Msa0713380:CDS | 40.0% | |
| TGTGATCGAATATTGTGGCT+AGG | + | chr5_1:5547396-5547415 | Msa0713380:CDS | 40.0% | |
| CGAATATTGTGGCTAGGAAA+AGG | + | chr5_1:5547402-5547421 | Msa0713380:CDS | 40.0% | |
| GTCAGTTACGTTACATAAGG+GGG | + | chr5_1:5547668-5547687 | Msa0713380:three_prime_UTR | 40.0% | |
| TCAGGGTAGCAATTGGATCT+TGG | + | chr5_1:5544805-5544824 | Msa0713380:intron | 45.0% | |
| TAAATGGGCAGTACGGTTCA+AGG | + | chr5_1:5544971-5544990 | Msa0713380:intron | 45.0% | |
| AAATGGGCAGTACGGTTCAA+GGG | + | chr5_1:5544972-5544991 | Msa0713380:intron | 45.0% | |
| CTACGTCTCCGACTACAAAA+CGG | - | chr5_1:5545067-5545086 | None:intergenic | 45.0% | |
| ACTACTTCCTGGAAACTGTG+AGG | - | chr5_1:5545191-5545210 | None:intergenic | 45.0% | |
| CATTCAGTGGAACTACTTCC+TGG | - | chr5_1:5545202-5545221 | None:intergenic | 45.0% | |
| GAAGTAGTTCCACTGAATGC+TGG | + | chr5_1:5545203-5545222 | Msa0713380:CDS | 45.0% | |
| TGGAAATGTACTAGGAGCAG+AGG | + | chr5_1:5545223-5545242 | Msa0713380:CDS | 45.0% | |
| !!! | TGGCTTTTGTGTTTGCTGTC+AGG | - | chr5_1:5545311-5545330 | None:intergenic | 45.0% |
| GCAGAAGAAGTTCTCAACAC+CGG | - | chr5_1:5545350-5545369 | None:intergenic | 45.0% | |
| GCATCATAGTTCCGGAGATT+TGG | + | chr5_1:5545694-5545713 | Msa0713380:CDS | 45.0% | |
| CAATAACGAGCCCAAATCTC+CGG | - | chr5_1:5545708-5545727 | None:intergenic | 45.0% | |
| ! | CCATCATCATCTTGGTTCTC+AGG | - | chr5_1:5545824-5545843 | None:intergenic | 45.0% |
| CCTGAGAACCAAGATGATGA+TGG | + | chr5_1:5545821-5545840 | Msa0713380:CDS | 45.0% | |
| ATGTATCTGTTTGGGTGCAG+AGG | + | chr5_1:5545909-5545928 | Msa0713380:CDS | 45.0% | |
| !! | ACCTGTTGGAGTTGGTCTTA+TGG | + | chr5_1:5545967-5545986 | Msa0713380:CDS | 45.0% |
| !! | CCTGTTGGAGTTGGTCTTAT+GGG | + | chr5_1:5545968-5545987 | Msa0713380:CDS | 45.0% |
| !! | AGTTGGTCTTATGGGCTACA+TGG | + | chr5_1:5545976-5545995 | Msa0713380:CDS | 45.0% |
| !! | GTTGGTCTTATGGGCTACAT+GGG | + | chr5_1:5545977-5545996 | Msa0713380:CDS | 45.0% |
| ! | TATGGGCTACATGGGAAACA+AGG | + | chr5_1:5545985-5546004 | Msa0713380:CDS | 45.0% |
| CTGACTTCTGGTACAAAGGA+TGG | + | chr5_1:5546384-5546403 | Msa0713380:CDS | 45.0% | |
| ATAAAGCTCACTCGTGCGAT+GGG | - | chr5_1:5546500-5546519 | None:intergenic | 45.0% | |
| AATAAAGCTCACTCGTGCGA+TGG | - | chr5_1:5546501-5546520 | None:intergenic | 45.0% | |
| AGATTCGGAGGTTCGGAAAT+TGG | + | chr5_1:5546656-5546675 | Msa0713380:CDS | 45.0% | |
| CGTGTTGGGCATGTATTTGA+TGG | + | chr5_1:5547186-5547205 | Msa0713380:CDS | 45.0% | |
| GCAGGTGTGATCGAATATTG+TGG | + | chr5_1:5547391-5547410 | Msa0713380:intron | 45.0% | |
| TTGGACAATAAACGTCAGGG+TGG | + | chr5_1:5547852-5547871 | Msa0713380:three_prime_UTR | 45.0% | |
| TGGACAATAAACGTCAGGGT+GGG | + | chr5_1:5547853-5547872 | Msa0713380:three_prime_UTR | 45.0% | |
| TCACAACCGCAACTTGCACA+AGG | - | chr5_1:5543806-5543825 | None:intergenic | 50.0% | |
| TGCTGGAAGACATCCATCTG+AGG | + | chr5_1:5544833-5544852 | Msa0713380:CDS | 50.0% | |
| ! | CGTTTTGTAGTCGGAGACGT+AGG | + | chr5_1:5545065-5545084 | Msa0713380:intron | 50.0% |
| TCTTGTGCCTCACAGTTTCC+AGG | + | chr5_1:5545181-5545200 | Msa0713380:intron | 50.0% | |
| ! | ATTGCGTCTAACGGACGTTC+GGG | - | chr5_1:5545545-5545564 | None:intergenic | 50.0% |
| ! | CATTGCGTCTAACGGACGTT+CGG | - | chr5_1:5545546-5545565 | None:intergenic | 50.0% |
| ! | GCTTTCATATACGGTGGTGG+TGG | + | chr5_1:5545647-5545666 | Msa0713380:CDS | 50.0% |
| !! | TTCATATACGGTGGTGGTGG+TGG | + | chr5_1:5545650-5545669 | Msa0713380:CDS | 50.0% |
| TATCTGTTTGGGTGCAGAGG+AGG | + | chr5_1:5545912-5545931 | Msa0713380:CDS | 50.0% | |
| CCCATAAGACCAACTCCAAC+AGG | - | chr5_1:5545971-5545990 | None:intergenic | 50.0% | |
| ACTACTGACCTTTGTCAGCG+AGG | + | chr5_1:5546206-5546225 | Msa0713380:intron | 50.0% | |
| CTCTTTAGCCTCGCTGACAA+AGG | - | chr5_1:5546217-5546236 | None:intergenic | 50.0% | |
| CTTTGTCAGCGAGGCTAAAG+AGG | + | chr5_1:5546215-5546234 | Msa0713380:intron | 50.0% | |
| TTCGGAGGTTCGGAAATTGG+TGG | + | chr5_1:5546659-5546678 | Msa0713380:CDS | 50.0% | |
| GAAGTTCTCAACACCGGCGA+AGG | - | chr5_1:5545344-5545363 | None:intergenic | 55.0% | |
| !! | ATATACGGTGGTGGTGGTGG+TGG | + | chr5_1:5545653-5545672 | Msa0713380:CDS | 55.0% |
| GTTCTCAACACCGGCGAAGG+TGG | - | chr5_1:5545341-5545360 | None:intergenic | 60.0% | |
| GCGCGACGAAATCACATGCG+AGG | + | chr5_1:5545849-5545868 | Msa0713380:CDS | 60.0% | |
| !! | TACGGTGGTGGTGGTGGTGG+AGG | + | chr5_1:5545656-5545675 | Msa0713380:CDS | 65.0% |
| !! | GGTGGTGGTGGTGGTGGAGG+TGG | + | chr5_1:5545659-5545678 | Msa0713380:CDS | 70.0% |
| CCACAGCGCGCCACCTTCGC+CGG | + | chr5_1:5545328-5545347 | Msa0713380:CDS | 75.0% | |
| ! | CCGGCGAAGGTGGCGCGCTG+TGG | - | chr5_1:5545331-5545350 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 5543795 | 5547935 | 5543795 | ID=Msa0713380;Name=Msa0713380 |
| chr5_1 | mRNA | 5543795 | 5547935 | 5543795 | ID=Msa0713380-mRNA-1;Parent=Msa0713380;Name=Msa0713380-mRNA-1;_AED=0.09;_eAED=0.09;_QI=164|1|1|1|0.7|0.72|11|327|630 |
| chr5_1 | exon | 5543795 | 5543928 | 5543795 | ID=Msa0713380-mRNA-1:exon:2427;Parent=Msa0713380-mRNA-1 |
| chr5_1 | exon | 5544061 | 5544120 | 5544061 | ID=Msa0713380-mRNA-1:exon:2428;Parent=Msa0713380-mRNA-1 |
| chr5_1 | exon | 5544197 | 5544302 | 5544197 | ID=Msa0713380-mRNA-1:exon:2429;Parent=Msa0713380-mRNA-1 |
| chr5_1 | exon | 5544402 | 5544494 | 5544402 | ID=Msa0713380-mRNA-1:exon:2430;Parent=Msa0713380-mRNA-1 |
| chr5_1 | exon | 5544606 | 5544696 | 5544606 | ID=Msa0713380-mRNA-1:exon:2431;Parent=Msa0713380-mRNA-1 |
| chr5_1 | exon | 5544809 | 5544913 | 5544809 | ID=Msa0713380-mRNA-1:exon:2432;Parent=Msa0713380-mRNA-1 |
| chr5_1 | exon | 5545196 | 5546006 | 5545196 | ID=Msa0713380-mRNA-1:exon:2433;Parent=Msa0713380-mRNA-1 |
| chr5_1 | exon | 5546324 | 5546508 | 5546324 | ID=Msa0713380-mRNA-1:exon:2434;Parent=Msa0713380-mRNA-1 |
| chr5_1 | exon | 5546611 | 5546719 | 5546611 | ID=Msa0713380-mRNA-1:exon:2435;Parent=Msa0713380-mRNA-1 |
| chr5_1 | exon | 5547171 | 5547319 | 5547171 | ID=Msa0713380-mRNA-1:exon:2436;Parent=Msa0713380-mRNA-1 |
| chr5_1 | exon | 5547395 | 5547935 | 5547395 | ID=Msa0713380-mRNA-1:exon:2437;Parent=Msa0713380-mRNA-1 |
| chr5_1 | five_prime_UTR | 5543795 | 5543928 | 5543795 | ID=Msa0713380-mRNA-1:five_prime_utr;Parent=Msa0713380-mRNA-1 |
| chr5_1 | five_prime_UTR | 5544061 | 5544090 | 5544061 | ID=Msa0713380-mRNA-1:five_prime_utr;Parent=Msa0713380-mRNA-1 |
| chr5_1 | CDS | 5544091 | 5544120 | 5544091 | ID=Msa0713380-mRNA-1:cds;Parent=Msa0713380-mRNA-1 |
| chr5_1 | CDS | 5544197 | 5544302 | 5544197 | ID=Msa0713380-mRNA-1:cds;Parent=Msa0713380-mRNA-1 |
| chr5_1 | CDS | 5544402 | 5544494 | 5544402 | ID=Msa0713380-mRNA-1:cds;Parent=Msa0713380-mRNA-1 |
| chr5_1 | CDS | 5544606 | 5544696 | 5544606 | ID=Msa0713380-mRNA-1:cds;Parent=Msa0713380-mRNA-1 |
| chr5_1 | CDS | 5544809 | 5544913 | 5544809 | ID=Msa0713380-mRNA-1:cds;Parent=Msa0713380-mRNA-1 |
| chr5_1 | CDS | 5545196 | 5546006 | 5545196 | ID=Msa0713380-mRNA-1:cds;Parent=Msa0713380-mRNA-1 |
| chr5_1 | CDS | 5546324 | 5546508 | 5546324 | ID=Msa0713380-mRNA-1:cds;Parent=Msa0713380-mRNA-1 |
| chr5_1 | CDS | 5546611 | 5546719 | 5546611 | ID=Msa0713380-mRNA-1:cds;Parent=Msa0713380-mRNA-1 |
| chr5_1 | CDS | 5547171 | 5547319 | 5547171 | ID=Msa0713380-mRNA-1:cds;Parent=Msa0713380-mRNA-1 |
| chr5_1 | CDS | 5547395 | 5547608 | 5547395 | ID=Msa0713380-mRNA-1:cds;Parent=Msa0713380-mRNA-1 |
| chr5_1 | three_prime_UTR | 5547609 | 5547935 | 5547609 | ID=Msa0713380-mRNA-1:three_prime_utr;Parent=Msa0713380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
