Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450430 | sp|Q5W915|USP_PEA | 93.500 | 600 | 39 | 0 | 1 | 600 | 1 | 600 | 0.0 | 1173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450430 | A0A072V120 | 98.000 | 600 | 12 | 0 | 1 | 600 | 1 | 600 | 0.0 | 1217 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1440960 | Msa1450430 | 0.804031 | 2.625535e-49 | -8.615850e-47 |
| Msa0626450 | Msa1450430 | 0.802633 | 5.114026e-49 | -8.615850e-47 |
| Msa0626490 | Msa1450430 | 0.808095 | 3.664372e-50 | -8.615850e-47 |
| Msa0664600 | Msa1450430 | 0.801357 | 9.353736e-49 | -8.615850e-47 |
| Msa1174530 | Msa1450430 | 0.805139 | 1.541708e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450430 | MtrunA17_Chr3g0125301 | 98.000 | 600 | 12 | 0 | 1 | 600 | 1 | 600 | 0.0 | 1217 |
| Msa1450430 | MtrunA17_Chr4g0052421 | 27.005 | 374 | 242 | 11 | 117 | 483 | 115 | 464 | 4.84e-19 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1450430 | AT5G52560.1 | 77.129 | 599 | 134 | 1 | 4 | 599 | 15 | 613 | 0.0 | 978 |
| Msa1450430 | AT2G35020.1 | 30.415 | 217 | 136 | 6 | 121 | 329 | 128 | 337 | 1.01e-15 | 80.5 |
Find 186 sgRNAs with CRISPR-Local
Find 519 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTAATGTGAGCTATAAAT+TGG | 0.171891 | tig0032904:+25809 | Msa1450430:three_prime_UTR |
| TCAAGCGTGCCAATATAAAA+AGG | 0.237962 | tig0032904:-26036 | Msa1450430:intergenic |
| ATTGAAAATCTTTCCGTAGA+TGG | 0.243706 | tig0032904:+24970 | Msa1450430:CDS |
| CATTATTATTACTACTAAAA+AGG | 0.247863 | tig0032904:-25843 | Msa1450430:intergenic |
| ATTACTTGGTTTATATTTCC+TGG | 0.268636 | tig0032904:-22531 | Msa1450430:intergenic |
| TGGTTTATATTTCCTGGAAA+TGG | 0.276077 | tig0032904:-22525 | Msa1450430:intergenic |
| GAGAAAGTCAGACCCCATTT+TGG | 0.281704 | tig0032904:-24868 | Msa1450430:intergenic |
| TGCTTCTTGAAGTGCCAATA+TGG | 0.292709 | tig0032904:-20043 | Msa1450430:intergenic |
| GTTCTTGTTGCTGGCGGTCT+TGG | 0.297075 | tig0032904:+19084 | Msa1450430:CDS |
| GATTAGCTCCACCTTGATTA+GGG | 0.301063 | tig0032904:+25967 | Msa1450430:three_prime_UTR |
| CTATGGTATGGATTTCCTTT+TGG | 0.304909 | tig0032904:-24115 | Msa1450430:intergenic |
| GTATCACATGGAAGCCAAAA+TGG | 0.310217 | tig0032904:+24854 | Msa1450430:CDS |
| AGATTAGCTCCACCTTGATT+AGG | 0.312819 | tig0032904:+25966 | Msa1450430:three_prime_UTR |
| AAAAGGGTTATTTCCAGCTT+TGG | 0.318368 | tig0032904:-18641 | Msa1450430:intergenic |
| ACAGAAGTCCATTTGTATCT+TGG | 0.320320 | tig0032904:-21661 | Msa1450430:intergenic |
| CAACCTTCTCTCGGCGAAAC+AGG | 0.324626 | tig0032904:+18273 | Msa1450430:CDS |
| GGTTTATATTTCCTGGAAAT+GGG | 0.326529 | tig0032904:-22524 | Msa1450430:intergenic |
| GGTATAATGCTGGGTTGAAA+TGG | 0.351056 | tig0032904:+21627 | Msa1450430:intron |
| TGTGAGCTATAAATTGGGTT+TGG | 0.351495 | tig0032904:+25815 | Msa1450430:three_prime_UTR |
| ACATTACATTGAATCCATAT+TGG | 0.361128 | tig0032904:+20029 | Msa1450430:CDS |
| ATTTGATTCTAATAGCTCTA+AGG | 0.361193 | tig0032904:-20729 | Msa1450430:intergenic |
| TTCCAGCTACCCTGGTGGTT+TGG | 0.367958 | tig0032904:+18579 | Msa1450430:CDS |
| GACGAATCTTTGTAGTCAAT+TGG | 0.370819 | tig0032904:-25627 | Msa1450430:intergenic |
| CCATTGAAAATCTGCAATAC+TGG | 0.371057 | tig0032904:-24808 | Msa1450430:intergenic |
| ACCGGCTACTCCCCATTTCC+AGG | 0.371829 | tig0032904:+22513 | Msa1450430:CDS |
| TCTAGGATACAATGGGATTA+AGG | 0.374807 | tig0032904:+19113 | Msa1450430:CDS |
| AATGCTATTTGCACGATAGA+TGG | 0.379955 | tig0032904:-24158 | Msa1450430:intergenic |
| ATCTGCCAGGGTTGGCTTCA+CGG | 0.380632 | tig0032904:+23355 | Msa1450430:CDS |
| GTGAGCTATAAATTGGGTTT+GGG | 0.381347 | tig0032904:+25816 | Msa1450430:three_prime_UTR |
| TAAATTTAACAAAGTTGAAC+AGG | 0.385395 | tig0032904:+25680 | Msa1450430:CDS |
| TTAGAATCAAATTCTTACTT+TGG | 0.386318 | tig0032904:+20740 | Msa1450430:CDS |
| GCATACACACACTTAACTTA+AGG | 0.391482 | tig0032904:+26068 | Msa1450430:three_prime_UTR |
| TTTGTGAGCTCTTCAATGTA+AGG | 0.391893 | tig0032904:-22874 | Msa1450430:intergenic |
| TTGAAAATCTTTCCGTAGAT+GGG | 0.392265 | tig0032904:+24971 | Msa1450430:CDS |
| AAATAGCATTATTCTCAAAA+AGG | 0.394077 | tig0032904:+24171 | Msa1450430:CDS |
| CCAGCGGTATTCTGAAAGTA+TGG | 0.397023 | tig0032904:+21112 | Msa1450430:CDS |
| AAGCCATGGTGGAATGGAAT+TGG | 0.400995 | tig0032904:-18231 | Msa1450430:intergenic |
| GAAGAAAGCATTCTTCGATC+AGG | 0.411478 | tig0032904:+18455 | Msa1450430:CDS |
| TAGTGCTACCTCTGGAGAAA+TGG | 0.415769 | tig0032904:+24135 | Msa1450430:CDS |
| ATGGTCAAGAGGTTGAAGTT+TGG | 0.420728 | tig0032904:+24827 | Msa1450430:CDS |
| TTCTCGTCGTCGTCGACGCC+AGG | 0.421577 | tig0032904:-18435 | Msa1450430:intergenic |
| TAAAATGACAGGAAGGTCTA+TGG | 0.422668 | tig0032904:+22413 | Msa1450430:intron |
| CATACACACACTTAACTTAA+GGG | 0.424204 | tig0032904:+26069 | Msa1450430:three_prime_UTR |
| GGAATCAGCCAAGAGTCGTT+TGG | 0.429832 | tig0032904:-18620 | Msa1450430:intergenic |
| TCCACCATGGCTTCCTCCCT+CGG | 0.431016 | tig0032904:+18241 | Msa1450430:exon |
| TAAGTCTACACTCGCGATCA+AGG | 0.439090 | tig0032904:+24933 | Msa1450430:CDS |
| GTTTATTAGCGGTGCCGTGC+CGG | 0.440474 | tig0032904:-18129 | Msa1450430:intergenic |
| TATCACATGGAAGCCAAAAT+GGG | 0.440662 | tig0032904:+24855 | Msa1450430:CDS |
| GTTCCCGTCGTTGTTTCCGC+TGG | 0.441249 | tig0032904:-19994 | Msa1450430:intergenic |
| GCCTTGAGGTGAAATTTGCC+TGG | 0.441641 | tig0032904:-25723 | Msa1450430:intergenic |
| TTCCAAACCACCAGGGTAGC+TGG | 0.451156 | tig0032904:-18581 | Msa1450430:intergenic |
| CCATCTCTTCCGCGATTGGC+CGG | 0.453491 | tig0032904:+18410 | Msa1450430:CDS |
| ACCATCTGAGTGGGTGAGCC+TGG | 0.454313 | tig0032904:-21871 | Msa1450430:intergenic |
| TGGGTTAACAAACTCCTGTA+TGG | 0.454636 | tig0032904:-22908 | Msa1450430:intergenic |
| TCGCTGTTGACATCACCGTC+AGG | 0.455503 | tig0032904:-22489 | Msa1450430:intergenic |
| CAATAACGCCAAACGACTCT+TGG | 0.455775 | tig0032904:+18612 | Msa1450430:CDS |
| CTCTTGGCTGATTCCAAAGC+TGG | 0.455807 | tig0032904:+18628 | Msa1450430:CDS |
| GCAATACTGGATCTGCTACT+TGG | 0.461068 | tig0032904:-24795 | Msa1450430:intergenic |
| TGTAATGTGAGCTATAAATT+GGG | 0.461623 | tig0032904:+25810 | Msa1450430:three_prime_UTR |
| TCGTCGTCGACGCCAGGTGC+CGG | 0.462552 | tig0032904:-18429 | Msa1450430:intergenic |
| TTCCGCGATTGGCCGGCACC+TGG | 0.464191 | tig0032904:+18417 | Msa1450430:CDS |
| TTCATCAAATTCGAGGAAGC+AGG | 0.470287 | tig0032904:+19033 | Msa1450430:CDS |
| TTTAAGAGTGTTACTTGTGT+GGG | 0.473046 | tig0032904:-20770 | Msa1450430:intergenic |
| ACTTAACTTAAGGGTGTGAA+TGG | 0.473315 | tig0032904:+26078 | Msa1450430:three_prime_UTR |
| TACAAATGGACTTCTGTTCA+AGG | 0.473717 | tig0032904:+21667 | Msa1450430:CDS |
| TGAGAATTTCATCAAATTCG+AGG | 0.473831 | tig0032904:+19026 | Msa1450430:CDS |
| TCAAATCAAATGTTTATTAG+CGG | 0.475024 | tig0032904:-18140 | Msa1450430:intergenic |
| GTATAATGCTGGGTTGAAAT+GGG | 0.476856 | tig0032904:+21628 | Msa1450430:CDS |
| TCCTGGAAATGGGGAGTAGC+CGG | 0.478357 | tig0032904:-22514 | Msa1450430:intergenic |
| AAGACCATCTCTTCCGCGAT+TGG | 0.479277 | tig0032904:+18406 | Msa1450430:CDS |
| CGGAAAGCAAAAGAAGCTAT+TGG | 0.481673 | tig0032904:+21840 | Msa1450430:CDS |
| ATACTTGTTAGGTATAATGC+TGG | 0.486195 | tig0032904:+21617 | Msa1450430:intron |
| GCAGGCAATTCCATCAGCAC+TGG | 0.486842 | tig0032904:+21770 | Msa1450430:intron |
| TGAAGCCAACCCTGGCAGAT+GGG | 0.489077 | tig0032904:-23352 | Msa1450430:intergenic |
| CTACTTGATTCCAGCTACCC+TGG | 0.491817 | tig0032904:+18571 | Msa1450430:CDS |
| TCAGAGGTCATGATAACAAA+AGG | 0.495812 | tig0032904:-20689 | Msa1450430:intergenic |
| GAAGGGGTGAAGCCATCAAA+AGG | 0.498396 | tig0032904:-18658 | Msa1450430:intergenic |
| CTTTAAGAGTGTTACTTGTG+TGG | 0.504118 | tig0032904:-20771 | Msa1450430:intergenic |
| TCCTCAGCATTATTCTTCAC+AGG | 0.504407 | tig0032904:-23578 | Msa1450430:intergenic |
| CCATACCATAGTGCTACCTC+TGG | 0.509828 | tig0032904:+24127 | Msa1450430:CDS |
| GGTGATGTCAACAGCGAGAC+CGG | 0.513947 | tig0032904:+22495 | Msa1450430:CDS |
| GAAGCCAACCCTGGCAGATG+GGG | 0.514138 | tig0032904:-23351 | Msa1450430:intergenic |
| TAATGATGCCAGGCTTGCAT+TGG | 0.515649 | tig0032904:+20895 | Msa1450430:CDS |
| GAGTGTAGACTTATGAGAAA+TGG | 0.516156 | tig0032904:-24923 | Msa1450430:intergenic |
| TTTCTCCAGAGGTAGCACTA+TGG | 0.517129 | tig0032904:-24132 | Msa1450430:intergenic |
| GTGAAGCCAACCCTGGCAGA+TGG | 0.519479 | tig0032904:-23353 | Msa1450430:intergenic |
| TAATGCTGAGGATGCTGCTA+AGG | 0.519996 | tig0032904:+23589 | Msa1450430:CDS |
| ACTGGTGAGACATTGACATT+TGG | 0.520973 | tig0032904:+19000 | Msa1450430:CDS |
| CCGGCCAATCGCGGAAGAGA+TGG | 0.526845 | tig0032904:-18410 | Msa1450430:intergenic |
| CTTCAAGAAGCAAGCTCAGA+AGG | 0.529676 | tig0032904:+20054 | Msa1450430:CDS |
| TCGATTCATTCAGCAAGAGT+TGG | 0.533239 | tig0032904:+18359 | Msa1450430:intron |
| TGAATTATATAGGTAAAGGT+AGG | 0.534656 | tig0032904:+25570 | Msa1450430:intron |
| AATCGCGGAAGAGATGGTCT+TGG | 0.536557 | tig0032904:-18404 | Msa1450430:intergenic |
| GAAGAGAAATATTCTAAGCC+AGG | 0.537065 | tig0032904:+25705 | Msa1450430:CDS |
| CCTCTGATTCTCAATACCTC+AGG | 0.537066 | tig0032904:-25654 | Msa1450430:intergenic |
| GCCAGGCAAATTTCACCTCA+AGG | 0.541476 | tig0032904:+25722 | Msa1450430:CDS |
| GAACTGACACCCAGTGCTGA+TGG | 0.541697 | tig0032904:-21780 | Msa1450430:intergenic |
| CCAGAGGTAGCACTATGGTA+TGG | 0.543808 | tig0032904:-24127 | Msa1450430:intergenic |
| TTGTGCATTTATAGTCTGCA+AGG | 0.544739 | tig0032904:+25996 | Msa1450430:three_prime_UTR |
| GTGAGCGTCTAGGATACAAT+GGG | 0.545702 | tig0032904:+19106 | Msa1450430:CDS |
| GTCGCCGAGGGAGGAAGCCA+TGG | 0.547172 | tig0032904:-18245 | Msa1450430:intergenic |
| GTTTATATTTCCTGGAAATG+GGG | 0.548559 | tig0032904:-22523 | Msa1450430:intergenic |
| CCATACTTTCAGAATACCGC+TGG | 0.550780 | tig0032904:-21112 | Msa1450430:intergenic |
| GGGAGGAAGCCATGGTGGAA+TGG | 0.552665 | tig0032904:-18237 | Msa1450430:intergenic |
| CGCCAGGTGCCGGCCAATCG+CGG | 0.553929 | tig0032904:-18419 | Msa1450430:intergenic |
| CCTGAGGTATTGAGAATCAG+AGG | 0.554089 | tig0032904:+25654 | Msa1450430:CDS |
| CGCTGTTGACATCACCGTCA+GGG | 0.555614 | tig0032904:-22488 | Msa1450430:intergenic |
| AGAATTAACATGGTACTGCT+TGG | 0.556988 | tig0032904:-21805 | Msa1450430:intergenic |
| AAGTTTGGCCCCGTATCACA+TGG | 0.557471 | tig0032904:+24842 | Msa1450430:CDS |
| GAACCTGTTTCGCCGAGAGA+AGG | 0.559557 | tig0032904:-18276 | Msa1450430:intergenic |
| AAGCTATTGGTGGAATTACC+AGG | 0.562567 | tig0032904:+21853 | Msa1450430:CDS |
| GATCCTCTTCTGAGAGCAAG+TGG | 0.563352 | tig0032904:+22462 | Msa1450430:CDS |
| GGCGGTCTTGGTGAGCGTCT+AGG | 0.565338 | tig0032904:+19096 | Msa1450430:CDS |
| AATGTCAATGTCTCACCAGT+TGG | 0.565975 | tig0032904:-18997 | Msa1450430:intergenic |
| GAATACCTCTGCATCGTCGA+CGG | 0.566116 | tig0032904:-25010 | Msa1450430:intergenic |
| TATGATAAGAGCCCCATCTA+CGG | 0.569609 | tig0032904:-24983 | Msa1450430:intergenic |
| ATTTACCGTGAAGCCAACCC+TGG | 0.570682 | tig0032904:-23360 | Msa1450430:intergenic |
| AGGTGGTTCAGTTCAGAACA+AGG | 0.571031 | tig0032904:+25590 | Msa1450430:CDS |
| TTAATTCTCTTGCAGTACCT+CGG | 0.571184 | tig0032904:+21820 | Msa1450430:CDS |
| CGACAATTTCAACCTTCTCT+CGG | 0.572037 | tig0032904:+18264 | Msa1450430:CDS |
| ATGACCTCTGATGACACTCA+TGG | 0.573493 | tig0032904:+20701 | Msa1450430:CDS |
| TTTGGGTAGACAAAACCTCA+TGG | 0.576519 | tig0032904:+21060 | Msa1450430:intron |
| ATTAGCGGTGCCGTGCCGGT+CGG | 0.577336 | tig0032904:-18125 | Msa1450430:intergenic |
| ACAAGTAACACTCTTAAAGC+AGG | 0.578003 | tig0032904:+20775 | Msa1450430:CDS |
| AAGTCTACACTCGCGATCAA+GGG | 0.582452 | tig0032904:+24934 | Msa1450430:CDS |
| ACAATGGCACCCTCCCACCT+AGG | 0.585440 | tig0032904:+25905 | Msa1450430:three_prime_UTR |
| CAGGCAATTCCATCAGCACT+GGG | 0.589359 | tig0032904:+21771 | Msa1450430:intron |
| GGTGAGCGTCTAGGATACAA+TGG | 0.590799 | tig0032904:+19105 | Msa1450430:CDS |
| GTTCAGTTCAGAACAAGGGT+TGG | 0.591734 | tig0032904:+25595 | Msa1450430:CDS |
| TATCCACTTGCTCTCAGAAG+AGG | 0.592526 | tig0032904:-22465 | Msa1450430:intergenic |
| ATAATTGTGACTTACGGAAG+GGG | 0.593230 | tig0032904:-18674 | Msa1450430:intergenic |
| AAAGCAAAAGAAGCTATTGG+TGG | 0.593598 | tig0032904:+21843 | Msa1450430:CDS |
| ATTTAACAAAGTTGAACAGG+TGG | 0.595001 | tig0032904:+25683 | Msa1450430:CDS |
| TGACCTCTGATGACACTCAT+GGG | 0.596875 | tig0032904:+20702 | Msa1450430:CDS |
| AGAATAGATAATGAAGCACA+AGG | 0.598639 | tig0032904:-25778 | Msa1450430:intergenic |
| AAGCCAACCCTGGCAGATGG+GGG | 0.600067 | tig0032904:-23350 | Msa1450430:intergenic |
| ACCAGGCTCACCCACTCAGA+TGG | 0.602273 | tig0032904:+21870 | Msa1450430:CDS |
| ATATAAGCTTCCAAACCACC+AGG | 0.603731 | tig0032904:-18589 | Msa1450430:intergenic |
| AGATGCCGTCGACGATGCAG+AGG | 0.604195 | tig0032904:+25005 | Msa1450430:CDS |
| GTTGAAATTGTCGCCGAGGG+AGG | 0.604314 | tig0032904:-18254 | Msa1450430:intergenic |
| TAGACAAAACCTCATGGGCA+TGG | 0.605123 | tig0032904:+21066 | Msa1450430:intron |
| TTAGCTCCACCTTGATTAGG+GGG | 0.605555 | tig0032904:+25969 | Msa1450430:three_prime_UTR |
| AAGGTCTATGGTGATAAATG+TGG | 0.606441 | tig0032904:+22425 | Msa1450430:CDS |
| GCTTAGACGATAATGATGCC+AGG | 0.606986 | tig0032904:+20885 | Msa1450430:CDS |
| CAAAGATTCGTCAGAGCCTG+AGG | 0.611817 | tig0032904:+25638 | Msa1450430:CDS |
| CTTCCAGCGGAAACAACGAC+GGG | 0.612026 | tig0032904:+19991 | Msa1450430:CDS |
| TTGGGTAGACAAAACCTCAT+GGG | 0.613174 | tig0032904:+21061 | Msa1450430:intron |
| CTTGATTCCAGCTACCCTGG+TGG | 0.614985 | tig0032904:+18574 | Msa1450430:CDS |
| AATCAACTTACCATCTGAGT+GGG | 0.616277 | tig0032904:-21880 | Msa1450430:intergenic |
| AAATGCATCTTCAAGCCTTG+AGG | 0.616905 | tig0032904:-25737 | Msa1450430:intergenic |
| TCAATCAAGAGCAAAGTCAG+TGG | 0.617100 | tig0032904:+24892 | Msa1450430:CDS |
| TGAAAATCTTTCCGTAGATG+GGG | 0.617657 | tig0032904:+24972 | Msa1450430:CDS |
| ACACAGAAACCTAGGTGGGA+GGG | 0.617748 | tig0032904:-25914 | Msa1450430:intergenic |
| GTTACTCCACACAGAAACCT+AGG | 0.618922 | tig0032904:-25922 | Msa1450430:intergenic |
| CATTCACTTCTTCATTCCAG+CGG | 0.619353 | tig0032904:+21096 | Msa1450430:CDS |
| CACACAGAAACCTAGGTGGG+AGG | 0.621419 | tig0032904:-25915 | Msa1450430:intergenic |
| CTCCCACCTAGGTTTCTGTG+TGG | 0.622687 | tig0032904:+25916 | Msa1450430:three_prime_UTR |
| TTTGGCTTCCATGTGATACG+GGG | 0.623678 | tig0032904:-24850 | Msa1450430:intergenic |
| GAAGGTTGAAATTGTCGCCG+AGG | 0.623874 | tig0032904:-18258 | Msa1450430:intergenic |
| GCCGAGGGAGGAAGCCATGG+TGG | 0.626986 | tig0032904:-18242 | Msa1450430:intergenic |
| GTGAAGATGTTATTGAACAA+TGG | 0.627064 | tig0032904:+18381 | Msa1450430:CDS |
| ATTATATAGGTAAAGGTAGG+TGG | 0.627156 | tig0032904:+25573 | Msa1450430:intron |
| TACTTGTTAGGTATAATGCT+GGG | 0.632271 | tig0032904:+21618 | Msa1450430:intron |
| ATTAGCTCCACCTTGATTAG+GGG | 0.632765 | tig0032904:+25968 | Msa1450430:three_prime_UTR |
| TGATCGACATAGTTACCGAC+CGG | 0.632932 | tig0032904:+18110 | Msa1450430:five_prime_UTR |
| AAGGTTGAAATTGTCGCCGA+GGG | 0.633731 | tig0032904:-18257 | Msa1450430:intergenic |
| AAGGGGTGAAGCCATCAAAA+GGG | 0.636406 | tig0032904:-18657 | Msa1450430:intergenic |
| TTGTGCAGGTGATGGAAACA+TGG | 0.636608 | tig0032904:+23543 | Msa1450430:intron |
| TGCACATCGCCATGCCCATG+AGG | 0.642511 | tig0032904:-21075 | Msa1450430:intergenic |
| ATTCCAATTCCATTCCACCA+TGG | 0.644804 | tig0032904:+18228 | Msa1450430:exon |
| GAATAGATAATGAAGCACAA+GGG | 0.646250 | tig0032904:-25777 | Msa1450430:intergenic |
| CAATCAACTTACCATCTGAG+TGG | 0.658635 | tig0032904:-21881 | Msa1450430:intergenic |
| GACATAGTTACCGACCGGCA+CGG | 0.663445 | tig0032904:+18115 | Msa1450430:five_prime_UTR |
| CTCCACACAGAAACCTAGGT+GGG | 0.665412 | tig0032904:-25918 | Msa1450430:intergenic |
| TCTTCCAGCGGAAACAACGA+CGG | 0.669714 | tig0032904:+19990 | Msa1450430:CDS |
| GGTGGTTCAGTTCAGAACAA+GGG | 0.670189 | tig0032904:+25591 | Msa1450430:CDS |
| ATCACATGGAAGCCAAAATG+GGG | 0.670736 | tig0032904:+24856 | Msa1450430:CDS |
| ATAGATGGCCATTTCTCCAG+AGG | 0.674991 | tig0032904:-24143 | Msa1450430:intergenic |
| ACGCCCATGAGTGTCATCAG+AGG | 0.678463 | tig0032904:-20705 | Msa1450430:intergenic |
| AGAGCAAGTGGATACCCTGA+CGG | 0.680040 | tig0032904:+22474 | Msa1450430:CDS |
| AAAAGACAAGACAACAACGT+AGG | 0.692204 | tig0032904:-18169 | Msa1450430:intergenic |
| GGAATGGAATTGGAATCGAG+AGG | 0.699363 | tig0032904:-18221 | Msa1450430:intergenic |
| ACCTGTGAAGAATAATGCTG+AGG | 0.707448 | tig0032904:+23577 | Msa1450430:CDS |
| ACTCCACACAGAAACCTAGG+TGG | 0.727985 | tig0032904:-25919 | Msa1450420:intergenic |
| GTACTGCAAGAGAATTAACA+TGG | 0.729330 | tig0032904:-21815 | Msa1450420:intergenic |
| TATAAGCTTCCAAACCACCA+GGG | 0.733754 | tig0032904:-18588 | Msa1450420:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTTGAAAAATTTATTTAT+CGG | - | tig0032904:19605-19624 | Msa1450430:intergenic | 10.0% |
| !! | AAAGTAATTAAAAATAAGAA+TGG | - | tig0032904:25422-25441 | Msa1450430:intergenic | 10.0% |
| !! | AATAATAATTAACGTTTCAT+TGG | + | tig0032904:19856-19875 | Msa1450430:intron | 15.0% |
| !!! | TTTTTCTATGCTATTATTTT+TGG | + | tig0032904:20233-20252 | Msa1450430:intron | 15.0% |
| !! | GAAAATACTTGAAATATTAT+AGG | - | tig0032904:20620-20639 | Msa1450430:intergenic | 15.0% |
| !!! | TCATACTTCATTTAATTTAA+TGG | - | tig0032904:21393-21412 | Msa1450430:intergenic | 15.0% |
| !!! | ATATTTTAAGTATTAATTCG+TGG | + | tig0032904:21745-21764 | Msa1450430:intron | 15.0% |
| !!! | AATACTTTTTATCAAAGAAA+AGG | - | tig0032904:22218-22237 | Msa1450430:intergenic | 15.0% |
| !!! | TTTCTTTGATAAAAAGTATT+TGG | + | tig0032904:22218-22237 | Msa1450430:intron | 15.0% |
| !! | ATATTATTACTTCATCAATT+CGG | + | tig0032904:22963-22982 | Msa1450430:intron | 15.0% |
| !!! | TTGAAATTTTTATGGTATAA+AGG | + | tig0032904:23772-23791 | Msa1450430:intron | 15.0% |
| !! | AAAGAAAAAAAAAAACTAAG+CGG | - | tig0032904:23820-23839 | Msa1450430:intergenic | 15.0% |
| !! | TAAGAAATGAAATCATATAA+TGG | + | tig0032904:24012-24031 | Msa1450430:intron | 15.0% |
| !! | TGTTACATATAAAATTATCA+GGG | + | tig0032904:24511-24530 | Msa1450430:intron | 15.0% |
| !! | TAAGACTTTCTATATAAATT+TGG | - | tig0032904:25334-25353 | Msa1450430:intergenic | 15.0% |
| !! | TTTATGAATTATATAGGTAA+AGG | + | tig0032904:25566-25585 | Msa1450430:intron | 15.0% |
| !! | CATTATTATTACTACTAAAA+AGG | - | tig0032904:25846-25865 | Msa1450430:intergenic | 15.0% |
| !! | TCAAATCAAATGTTTATTAG+CGG | - | tig0032904:18143-18162 | Msa1450430:intergenic | 20.0% |
| !! | ACGTTTATTGAAATATGAAA+AGG | - | tig0032904:18323-18342 | Msa1450430:intergenic | 20.0% |
| !! | AAAGTAATAATTGTGACTTA+CGG | - | tig0032904:18683-18702 | Msa1450430:intergenic | 20.0% |
| !! | TAGAGCAAAAAAAATGATAA+AGG | - | tig0032904:19146-19165 | Msa1450430:intergenic | 20.0% |
| !!! | TATAGCTACATTGTAAATTT+TGG | - | tig0032904:19316-19335 | Msa1450430:intergenic | 20.0% |
| !!! | TTAGCTTAAACTAAATTTTG+AGG | + | tig0032904:19343-19362 | Msa1450430:intron | 20.0% |
| !!! | TAGCTTAAACTAAATTTTGA+GGG | + | tig0032904:19344-19363 | Msa1450430:intron | 20.0% |
| !! | TTGAAAAATTTATTTATCGG+AGG | - | tig0032904:19602-19621 | Msa1450430:intergenic | 20.0% |
| !! | AGAAAAATGATTAATTGTGT+TGG | + | tig0032904:19741-19760 | Msa1450430:intron | 20.0% |
| !! | TTTATCACATGTTAACAAAA+TGG | - | tig0032904:20121-20140 | Msa1450430:intergenic | 20.0% |
| !! | AAATTAGGTACAATATAGAA+AGG | - | tig0032904:20175-20194 | Msa1450430:intergenic | 20.0% |
| !!! | ATTTTATGAGAGGAAAAAAA+AGG | - | tig0032904:20473-20492 | Msa1450430:intergenic | 20.0% |
| !!! | TTTTTTTTCCTCTCATAAAA+TGG | + | tig0032904:20472-20491 | Msa1450430:intron | 20.0% |
| !!! | TTTCAAGTATTTTCTAGTAA+TGG | + | tig0032904:20626-20645 | Msa1450430:intron | 20.0% |
| !!! | TTCAAGTATTTTCTAGTAAT+GGG | + | tig0032904:20627-20646 | Msa1450430:intron | 20.0% |
| !! | TTAGAATCAAATTCTTACTT+TGG | + | tig0032904:20740-20759 | Msa1450430:CDS | 20.0% |
| !!! | ATTAATTTTGAACATGATTC+AGG | + | tig0032904:20850-20869 | Msa1450430:intron | 20.0% |
| !!! | TGATTGCGTTATTTTAAAAA+AGG | + | tig0032904:20963-20982 | Msa1450430:intron | 20.0% |
| !! | GTTCTATTAACGTAAAATAT+TGG | + | tig0032904:21001-21020 | Msa1450430:intron | 20.0% |
| !! | AGAACATTCTTAAATTACTT+AGG | - | tig0032904:21240-21259 | Msa1450430:intergenic | 20.0% |
| !!! | AAGAATGTTCTGAATATATT+TGG | + | tig0032904:21249-21268 | Msa1450430:intron | 20.0% |
| !!! | AGAATGTTCTGAATATATTT+GGG | + | tig0032904:21250-21269 | Msa1450430:intron | 20.0% |
| !! | AATACTTAAAATATACCGAT+GGG | - | tig0032904:21739-21758 | Msa1450430:intergenic | 20.0% |
| !! | TAATACTTAAAATATACCGA+TGG | - | tig0032904:21740-21759 | Msa1450430:intergenic | 20.0% |
| !!! | TCTATTTTCTTATTTTCTTG+AGG | + | tig0032904:22148-22167 | Msa1450430:intron | 20.0% |
| !!! | ATGTCAAATGAGATTTTTTA+TGG | + | tig0032904:22356-22375 | Msa1450430:intron | 20.0% |
| !! | AAGTATGAAAAATGATTACT+TGG | - | tig0032904:22548-22567 | Msa1450430:intergenic | 20.0% |
| !! | CACACAATAGATAATTAAAA+AGG | - | tig0032904:22611-22630 | Msa1450430:intergenic | 20.0% |
| !!! | CTTTTTAATTATCTATTGTG+TGG | + | tig0032904:22609-22628 | Msa1450430:intron | 20.0% |
| !! | TTAGAAAGAAGAATTACTTT+GGG | - | tig0032904:22930-22949 | Msa1450430:intergenic | 20.0% |
| !! | ATTAGAAAGAAGAATTACTT+TGG | - | tig0032904:22931-22950 | Msa1450430:intergenic | 20.0% |
| !!! | AAGTTTTCATGAAAAAATTG+AGG | + | tig0032904:23163-23182 | Msa1450430:intron | 20.0% |
| !! | AGATTATCTTGAGTTATAAA+TGG | + | tig0032904:23445-23464 | Msa1450430:intron | 20.0% |
| !! | AAAGAAAGAAAAAGAAATAG+TGG | + | tig0032904:23654-23673 | Msa1450430:intron | 20.0% |
| !!! | GATTCGAATTGAAATTTTTA+TGG | + | tig0032904:23764-23783 | Msa1450430:intron | 20.0% |
| !!! | AATTTTTATGGTATAAAGGT+TGG | + | tig0032904:23776-23795 | Msa1450430:intron | 20.0% |
| !!! | ATTTTTATGGTATAAAGGTT+GGG | + | tig0032904:23777-23796 | Msa1450430:intron | 20.0% |
| !! | AAGAAAAAAAAAAACTAAGC+GGG | - | tig0032904:23819-23838 | Msa1450430:intergenic | 20.0% |
| !! | TTTACAAAACGTTGAATATT+GGG | - | tig0032904:23883-23902 | Msa1450430:intergenic | 20.0% |
| !!! | TTTTACAAAACGTTGAATAT+TGG | - | tig0032904:23884-23903 | Msa1450430:intergenic | 20.0% |
| !!! | ACGTTTTGTAAAAGAAATAT+TGG | + | tig0032904:23891-23910 | Msa1450430:intron | 20.0% |
| !!! | AAAACCTTTTAGAAAGTTAA+GGG | - | tig0032904:24055-24074 | Msa1450430:intergenic | 20.0% |
| !! | AAATAGCATTATTCTCAAAA+AGG | + | tig0032904:24171-24190 | Msa1450430:CDS | 20.0% |
| !! | TTTCACAAAACTAATTCAAA+GGG | - | tig0032904:24285-24304 | Msa1450430:intergenic | 20.0% |
| !!! | TTTTCACAAAACTAATTCAA+AGG | - | tig0032904:24286-24305 | Msa1450430:intergenic | 20.0% |
| !!! | CTGATAATTTTATATGTAAC+AGG | - | tig0032904:24512-24531 | Msa1450430:intergenic | 20.0% |
| !! | CTGTTACATATAAAATTATC+AGG | + | tig0032904:24510-24529 | Msa1450430:intron | 20.0% |
| !! | TAAATACCGATAAATTGTAT+TGG | - | tig0032904:25035-25054 | Msa1450430:intergenic | 20.0% |
| !! | TAAAAGATTCAATCAAACAA+AGG | - | tig0032904:25528-25547 | Msa1450430:intergenic | 20.0% |
| !! | TAAATTTAACAAAGTTGAAC+AGG | + | tig0032904:25680-25699 | Msa1450430:CDS | 20.0% |
| ! | TAAGATTAATTTCTATGCAC+AGG | + | tig0032904:18806-18825 | Msa1450430:intron | 25.0% |
| !!! | ATTTTTTGTTTGTGCATGTT+CGG | + | tig0032904:18929-18948 | Msa1450430:intron | 25.0% |
| !! | GAGCTTATCAACTTAAATTT+TGG | + | tig0032904:19277-19296 | Msa1450430:intron | 25.0% |
| ! | ACCAAAAATATTCCTAATGT+AGG | - | tig0032904:19387-19406 | Msa1450430:intergenic | 25.0% |
| !!! | TACATTAGGAATATTTTTGG+TGG | + | tig0032904:19386-19405 | Msa1450430:intron | 25.0% |
| ! | ATTAAATGAAGGTTATGATG+AGG | + | tig0032904:19415-19434 | Msa1450430:intron | 25.0% |
| ! | ATGTAATAACAATGTGTTCT+GGG | - | tig0032904:19450-19469 | Msa1450430:intergenic | 25.0% |
| ! | AATGTAATAACAATGTGTTC+TGG | - | tig0032904:19451-19470 | Msa1450430:intergenic | 25.0% |
| !! | CACATTGTTATTACATTATG+TGG | + | tig0032904:19454-19473 | Msa1450430:intron | 25.0% |
| ! | ACCTAAACTACAATGAATAA+GGG | - | tig0032904:19801-19820 | Msa1450430:intergenic | 25.0% |
| ! | ACATTACATTGAATCCATAT+TGG | + | tig0032904:20029-20048 | Msa1450430:CDS | 25.0% |
| ! | ATGGTTAAATATGACTCTAT+TGG | - | tig0032904:20098-20117 | Msa1450430:intergenic | 25.0% |
| ! | TACCTAATTTCTATGACTTA+GGG | + | tig0032904:20185-20204 | Msa1450430:intron | 25.0% |
| !! | TTATTTTCTGTCAGAATGAA+TGG | - | tig0032904:20212-20231 | Msa1450430:intergenic | 25.0% |
| ! | TTTGGAAAATGACTTGATAT+TGG | + | tig0032904:20251-20270 | Msa1450430:intron | 25.0% |
| !! | TCTAGTGTGGAAAATATTTT+TGG | - | tig0032904:20501-20520 | Msa1450430:intergenic | 25.0% |
| !! | ATTTGATTCTAATAGCTCTA+AGG | - | tig0032904:20732-20751 | Msa1450430:intergenic | 25.0% |
| !!! | TGAATTCTGTATCTGTTTTT+TGG | - | tig0032904:20923-20942 | Msa1450430:intergenic | 25.0% |
| ! | AAAAAACAGATACAGAATTC+AGG | + | tig0032904:20922-20941 | Msa1450430:CDS | 25.0% |
| ! | GAAATTGAAGAGATATAAGT+AGG | - | tig0032904:21169-21188 | Msa1450430:intergenic | 25.0% |
| !!! | CATTTGCTGTATTTATTTCT+TGG | - | tig0032904:21544-21563 | Msa1450430:intergenic | 25.0% |
| ! | CAAGAAATAAATACAGCAAA+TGG | + | tig0032904:21542-21561 | Msa1450430:intron | 25.0% |
| ! | ATACTTAAAATATACCGATG+GGG | - | tig0032904:21738-21757 | Msa1450430:intergenic | 25.0% |
| ! | ATAAGCACAATCAAATGTTA+TGG | - | tig0032904:22265-22284 | Msa1450430:intergenic | 25.0% |
| ! | ATTACTTGGTTTATATTTCC+TGG | - | tig0032904:22534-22553 | Msa1450430:intergenic | 25.0% |
| ! | ATTTGAATACTAGACATTTC+AGG | + | tig0032904:22716-22735 | Msa1450430:intron | 25.0% |
| ! | ATAACTCAAGATAATCTCAA+AGG | - | tig0032904:23442-23461 | Msa1450430:intergenic | 25.0% |
| ! | TTGAATACATACACTTAACT+AGG | - | tig0032904:23693-23712 | Msa1450430:intergenic | 25.0% |
| ! | TGTATTCAATTGAAGTAGAT+TGG | + | tig0032904:23704-23723 | Msa1450430:intron | 25.0% |
| ! | TTCTTAATTTCACAAACTTG+TGG | - | tig0032904:23740-23759 | Msa1450430:intergenic | 25.0% |
| !! | AGTGACATTTTTGTAACTAA+AGG | + | tig0032904:23983-24002 | Msa1450430:intron | 25.0% |
| !!! | GAAAACCTTTTAGAAAGTTA+AGG | - | tig0032904:24056-24075 | Msa1450430:intergenic | 25.0% |
| !!! | TTTCTAAAAGGTTTTCAAGA+TGG | + | tig0032904:24060-24079 | Msa1450430:intron | 25.0% |
| !!! | CATGTACTTTTTTTATCTGA+AGG | + | tig0032904:24090-24109 | Msa1450430:intron | 25.0% |
| !! | TTTTTCTTTATTCTGTACGA+TGG | - | tig0032904:24348-24367 | Msa1450430:intergenic | 25.0% |
| !!! | ACAGTTATAGTTTTAGCAAT+TGG | - | tig0032904:24731-24750 | Msa1450430:intergenic | 25.0% |
| ! | GGTATTCCAATACAATTTAT+CGG | + | tig0032904:25026-25045 | Msa1450430:intron | 25.0% |
| ! | AACTAAATATTAGCACCTAT+AGG | - | tig0032904:25225-25244 | Msa1450430:intergenic | 25.0% |
| ! | ATAGGTGCTAATATTTAGTT+TGG | + | tig0032904:25225-25244 | Msa1450430:intron | 25.0% |
| ! | GGATGTATTTATTAGAAGTT+AGG | - | tig0032904:25290-25309 | Msa1450430:intergenic | 25.0% |
| ! | TCTATATAAATTTGGATGAC+TGG | - | tig0032904:25326-25345 | Msa1450430:intergenic | 25.0% |
| !!! | TTTACTTTTTGAAGAGATAG+TGG | - | tig0032904:25466-25485 | Msa1450430:intergenic | 25.0% |
| ! | TGAATTATATAGGTAAAGGT+AGG | + | tig0032904:25570-25589 | Msa1450430:intron | 25.0% |
| ! | TTGTAATGTGAGCTATAAAT+TGG | + | tig0032904:25809-25828 | Msa1450430:three_prime_UTR | 25.0% |
| ! | TGTAATGTGAGCTATAAATT+GGG | + | tig0032904:25810-25829 | Msa1450430:three_prime_UTR | 25.0% |
| !!! | TAGTGACATTAAAGTTTTGA+AGG | + | tig0032904:25873-25892 | Msa1450430:three_prime_UTR | 25.0% |
| !!! | AGTGACATTAAAGTTTTGAA+GGG | + | tig0032904:25874-25893 | Msa1450430:three_prime_UTR | 25.0% |
| !! | ATACGATACCCTTTTTATAT+TGG | + | tig0032904:26027-26046 | Msa1450430:three_prime_UTR | 25.0% |
| GTGAAGATGTTATTGAACAA+TGG | + | tig0032904:18381-18400 | Msa1450430:CDS | 30.0% | |
| TCTATCTATCTATCTTGCAA+TGG | - | tig0032904:18484-18503 | Msa1450430:intergenic | 30.0% | |
| AATAATTGTGACTTACGGAA+GGG | - | tig0032904:18678-18697 | Msa1450430:intergenic | 30.0% | |
| TAATAATTGTGACTTACGGA+AGG | - | tig0032904:18679-18698 | Msa1450430:intergenic | 30.0% | |
| ACAATAACAGAAATGCACAA+AGG | - | tig0032904:18744-18763 | Msa1450430:intergenic | 30.0% | |
| ATCCAATTCCAATCAAATCA+CGG | - | tig0032904:18872-18891 | Msa1450430:intergenic | 30.0% | |
| ATGCACAAACAAAAAATGCA+AGG | - | tig0032904:18926-18945 | Msa1450430:intergenic | 30.0% | |
| !!! | TTTTTTGTTTGTGCATGTTC+GGG | + | tig0032904:18930-18949 | Msa1450430:intron | 30.0% |
| ! | CTGTTTAGTAATGATTTTGC+AGG | + | tig0032904:18972-18991 | Msa1450430:intron | 30.0% |
| TGAGAATTTCATCAAATTCG+AGG | + | tig0032904:19026-19045 | Msa1450430:CDS | 30.0% | |
| ATCAACCAACATCCATATTA+TGG | + | tig0032904:19222-19241 | Msa1450430:intron | 30.0% | |
| TAACACCATAATATGGATGT+TGG | - | tig0032904:19230-19249 | Msa1450430:intergenic | 30.0% | |
| AACATCCATATTATGGTGTT+AGG | + | tig0032904:19229-19248 | Msa1450430:intron | 30.0% | |
| ! | GCCTACATTAGGAATATTTT+TGG | + | tig0032904:19383-19402 | Msa1450430:intron | 30.0% |
| CAATATCCAATATCTAGTCT+AGG | + | tig0032904:19521-19540 | Msa1450430:intron | 30.0% | |
| AAAAAACCCTCTGATTCAAA+AGG | - | tig0032904:19579-19598 | Msa1450430:intergenic | 30.0% | |
| !! | AATAAGGGTGCTTTAGTAAA+TGG | - | tig0032904:19786-19805 | Msa1450430:intergenic | 30.0% |
| ACCCTTATTCATTGTAGTTT+AGG | + | tig0032904:19797-19816 | Msa1450430:intron | 30.0% | |
| CACCTAAACTACAATGAATA+AGG | - | tig0032904:19802-19821 | Msa1450430:intergenic | 30.0% | |
| TCATTGGTATTCTAATGTGA+CGG | + | tig0032904:19872-19891 | Msa1450430:intron | 30.0% | |
| ATGAGACACTTATAATGAGA+TGG | + | tig0032904:19921-19940 | Msa1450430:intron | 30.0% | |
| ! | TAGCTTCTTCTTCTTCTTTT+AGG | + | tig0032904:19963-19982 | Msa1450430:intron | 30.0% |
| TCACATGTTAACAAAATGGA+TGG | - | tig0032904:20117-20136 | Msa1450430:intergenic | 30.0% | |
| GTACCTAATTTCTATGACTT+AGG | + | tig0032904:20184-20203 | Msa1450430:intron | 30.0% | |
| ! | TTCACCAGAAATGTTTTCTA+GGG | - | tig0032904:20304-20323 | Msa1450430:intergenic | 30.0% |
| ! | ATTCACCAGAAATGTTTTCT+AGG | - | tig0032904:20305-20324 | Msa1450430:intergenic | 30.0% |
| ! | CGACTATTACAACTCATTTT+AGG | - | tig0032904:20415-20434 | Msa1450430:intergenic | 30.0% |
| ! | TTTGGAAACCATTTTATGAG+AGG | - | tig0032904:20483-20502 | Msa1450430:intergenic | 30.0% |
| ATTAATTACCACAAGAGGAT+AGG | - | tig0032904:20577-20596 | Msa1450430:intergenic | 30.0% | |
| CTGATATTAATTACCACAAG+AGG | - | tig0032904:20582-20601 | Msa1450430:intergenic | 30.0% | |
| GTGGTAATTAATATCAGCTA+CGG | + | tig0032904:20585-20604 | Msa1450430:intron | 30.0% | |
| !! | TTTAAGAGTGTTACTTGTGT+GGG | - | tig0032904:20773-20792 | Msa1450430:intergenic | 30.0% |
| ! | ATACAGAATTCAGGTATTGT+TGG | + | tig0032904:20931-20950 | Msa1450430:intron | 30.0% |
| TTCTATTAACCGTTTCTCTT+TGG | + | tig0032904:21042-21061 | Msa1450430:intron | 30.0% | |
| TCTATTAACCGTTTCTCTTT+GGG | + | tig0032904:21043-21062 | Msa1450430:intron | 30.0% | |
| ATATTTATAGTGTGACATGG+CGG | - | tig0032904:21287-21306 | Msa1450430:intergenic | 30.0% | |
| CCATGTCACACTATAAATAT+CGG | + | tig0032904:21287-21306 | Msa1450430:intron | 30.0% | |
| CATGTCACACTATAAATATC+GGG | + | tig0032904:21288-21307 | Msa1450430:intron | 30.0% | |
| ATGTCACACTATAAATATCG+GGG | + | tig0032904:21289-21308 | Msa1450430:intron | 30.0% | |
| ! | TGATGTGACTTTTGATCAAA+TGG | + | tig0032904:21410-21429 | Msa1450430:intron | 30.0% |
| GTTAGACAAAGCCTAAATAT+CGG | + | tig0032904:21478-21497 | Msa1450430:intron | 30.0% | |
| ! | TTGCCAATTCTATAAGTTGA+TGG | + | tig0032904:21501-21520 | Msa1450430:intron | 30.0% |
| !! | TGCCAATTCTATAAGTTGAT+GGG | + | tig0032904:21502-21521 | Msa1450430:intron | 30.0% |
| ATCCCATCAACTTATAGAAT+TGG | - | tig0032904:21507-21526 | Msa1450430:intergenic | 30.0% | |
| GTGATGAATGTATACTTGTT+AGG | + | tig0032904:21606-21625 | Msa1450430:intron | 30.0% | |
| ! | ATACTTGTTAGGTATAATGC+TGG | + | tig0032904:21617-21636 | Msa1450430:intron | 30.0% |
| ! | TACTTGTTAGGTATAATGCT+GGG | + | tig0032904:21618-21637 | Msa1450430:intron | 30.0% |
| ! | CTCTTTTTCCAAGATACAAA+TGG | + | tig0032904:21653-21672 | Msa1450430:CDS | 30.0% |
| TCGCGTATGTTATATTAATG+TGG | + | tig0032904:21953-21972 | Msa1450430:intron | 30.0% | |
| TACACTATACACACAATTGA+GGG | - | tig0032904:22122-22141 | Msa1450430:intergenic | 30.0% | |
| ATACACTATACACACAATTG+AGG | - | tig0032904:22123-22142 | Msa1450430:intergenic | 30.0% | |
| AGCAACTATTTACTTGAACT+TGG | - | tig0032904:22186-22205 | Msa1450430:intergenic | 30.0% | |
| AGTTCAAGTAAATAGTTGCT+AGG | + | tig0032904:22186-22205 | Msa1450430:intron | 30.0% | |
| GTTCAAGTAAATAGTTGCTA+GGG | + | tig0032904:22187-22206 | Msa1450430:intron | 30.0% | |
| ! | TGCTTATACTTTTACATGCT+TGG | + | tig0032904:22278-22297 | Msa1450430:intron | 30.0% |
| ! | TTATACTTTTACATGCTTGG+AGG | + | tig0032904:22281-22300 | Msa1450430:intron | 30.0% |
| ATGACATTAAAATGACAGGA+AGG | + | tig0032904:22406-22425 | Msa1450430:intron | 30.0% | |
| GTTTATATTTCCTGGAAATG+GGG | - | tig0032904:22526-22545 | Msa1450430:intergenic | 30.0% | |
| GGTTTATATTTCCTGGAAAT+GGG | - | tig0032904:22527-22546 | Msa1450430:intergenic | 30.0% | |
| TGGTTTATATTTCCTGGAAA+TGG | - | tig0032904:22528-22547 | Msa1450430:intergenic | 30.0% | |
| AATTAAAAAGGCGAATTCCA+CGG | - | tig0032904:22599-22618 | Msa1450430:intergenic | 30.0% | |
| TCTGCATTATTATCATGTCA+TGG | + | tig0032904:22651-22670 | Msa1450430:intron | 30.0% | |
| AGATCATTGTGCATTATGTT+TGG | + | tig0032904:22691-22710 | Msa1450430:intron | 30.0% | |
| !!! | AGCAATGTTTTAGTTGTGAT+TGG | + | tig0032904:22746-22765 | Msa1450430:intron | 30.0% |
| !!! | TTCCAGTTGATTTTAGAACT+TGG | + | tig0032904:22850-22869 | Msa1450430:intron | 30.0% |
| AGAAAATGGTAAAGCAAAGT+CGG | - | tig0032904:23040-23059 | Msa1450430:intergenic | 30.0% | |
| AAAGACGAGAGAAAAGAAAA+TGG | - | tig0032904:23054-23073 | Msa1450430:intergenic | 30.0% | |
| ACAGTATGAACTATTCCAAT+TGG | + | tig0032904:23108-23127 | Msa1450430:intron | 30.0% | |
| AGTTTGAACTACAAACCAAT+TGG | - | tig0032904:23126-23145 | Msa1450430:intergenic | 30.0% | |
| CATTGTAGATGTGATATATC+AGG | - | tig0032904:23232-23251 | Msa1450430:intergenic | 30.0% | |
| TCAATTGAAGTAGATTGGAA+AGG | + | tig0032904:23709-23728 | Msa1450430:intron | 30.0% | |
| ATGTACAGAACTTCGAAAAT+AGG | + | tig0032904:23946-23965 | Msa1450430:intron | 30.0% | |
| ACCATAAGATCTAAATTGAG+TGG | + | tig0032904:24379-24398 | Msa1450430:intron | 30.0% | |
| TCCACTCAATTTAGATCTTA+TGG | - | tig0032904:24383-24402 | Msa1450430:intergenic | 30.0% | |
| AAGATCTAAATTGAGTGGAT+TGG | + | tig0032904:24384-24403 | Msa1450430:intron | 30.0% | |
| AGATGCTAGAATTTCGTATT+AGG | + | tig0032904:24593-24612 | Msa1450430:intron | 30.0% | |
| AGACCTTAGAAACAATAGTA+AGG | + | tig0032904:24637-24656 | Msa1450430:intron | 30.0% | |
| !! | TCTCCTTACTATTGTTTCTA+AGG | - | tig0032904:24643-24662 | Msa1450430:intergenic | 30.0% |
| AATAGTAAGGAGAATAGATC+TGG | + | tig0032904:24650-24669 | Msa1450430:intron | 30.0% | |
| !!! | TTAGACATGGTTTTAGCAAT+TGG | - | tig0032904:24679-24698 | Msa1450430:intergenic | 30.0% |
| ! | ACAAAAGCACAAATTAGACA+TGG | - | tig0032904:24692-24711 | Msa1450430:intergenic | 30.0% |
| !! | AGTTTTAGCAATTGGTATCT+AGG | - | tig0032904:24723-24742 | Msa1450430:intergenic | 30.0% |
| ATTGAAAATCTTTCCGTAGA+TGG | + | tig0032904:24970-24989 | Msa1450430:CDS | 30.0% | |
| TTGAAAATCTTTCCGTAGAT+GGG | + | tig0032904:24971-24990 | Msa1450430:CDS | 30.0% | |
| GCATTTGCATACTAACTATT+TGG | + | tig0032904:25075-25094 | Msa1450430:intron | 30.0% | |
| TTGCATACTAACTATTTGGT+AGG | + | tig0032904:25079-25098 | Msa1450430:intron | 30.0% | |
| ! | TGTTATCAACTTTTCTGCAT+AGG | + | tig0032904:25177-25196 | Msa1450430:intron | 30.0% |
| TTTCTGCATAGGTTATCATT+AGG | + | tig0032904:25188-25207 | Msa1450430:intron | 30.0% | |
| GAATTTGTCAATAACAACTG+TGG | + | tig0032904:25262-25281 | Msa1450430:intron | 30.0% | |
| ATTATATAGGTAAAGGTAGG+TGG | + | tig0032904:25573-25592 | Msa1450430:intron | 30.0% | |
| ATTTAACAAAGTTGAACAGG+TGG | + | tig0032904:25683-25702 | Msa1450430:CDS | 30.0% | |
| GAATAGATAATGAAGCACAA+GGG | - | tig0032904:25780-25799 | Msa1450430:intergenic | 30.0% | |
| AGAATAGATAATGAAGCACA+AGG | - | tig0032904:25781-25800 | Msa1450430:intergenic | 30.0% | |
| CATACACACACTTAACTTAA+GGG | + | tig0032904:26069-26088 | Msa1450430:three_prime_UTR | 30.0% | |
| AAAAGACAAGACAACAACGT+AGG | - | tig0032904:18172-18191 | Msa1450430:intergenic | 35.0% | |
| ! | AAAAGGGTTATTTCCAGCTT+TGG | - | tig0032904:18644-18663 | Msa1450430:intergenic | 35.0% |
| ATAATTGTGACTTACGGAAG+GGG | - | tig0032904:18677-18696 | Msa1450430:intergenic | 35.0% | |
| ACACTGTGATGTAGTTTGAT+TGG | - | tig0032904:18846-18865 | Msa1450430:intergenic | 35.0% | |
| AACAAAAAATGCAAGGACGT+TGG | - | tig0032904:18919-18938 | Msa1450430:intergenic | 35.0% | |
| !! | TTTTTGTTTGTGCATGTTCG+GGG | + | tig0032904:18931-18950 | Msa1450430:intron | 35.0% |
| ! | TCTAGGATACAATGGGATTA+AGG | + | tig0032904:19113-19132 | Msa1450430:CDS | 35.0% |
| ACACACCTAACACCATAATA+TGG | - | tig0032904:19237-19256 | Msa1450430:intergenic | 35.0% | |
| ! | TATTATGGTGTTAGGTGTGT+TGG | + | tig0032904:19237-19256 | Msa1450430:intron | 35.0% |
| GATAAGCTCACAAATCACAA+TGG | - | tig0032904:19266-19285 | Msa1450430:intergenic | 35.0% | |
| AATGTAGGCAGCGTTTAATT+TGG | - | tig0032904:19372-19391 | Msa1450430:intergenic | 35.0% | |
| AATTAAACGCTGCCTACATT+AGG | + | tig0032904:19372-19391 | Msa1450430:intron | 35.0% | |
| GGTGGATCTTGATTAAATGA+AGG | + | tig0032904:19404-19423 | Msa1450430:intron | 35.0% | |
| GAGTAACCTAGACTAGATAT+TGG | - | tig0032904:19530-19549 | Msa1450430:intergenic | 35.0% | |
| ATCACAACAAAGCATGAGAA+GGG | + | tig0032904:19653-19672 | Msa1450430:intron | 35.0% | |
| GATACTTAAAACGAGACAGA+GGG | - | tig0032904:19696-19715 | Msa1450430:intergenic | 35.0% | |
| AGATACTTAAAACGAGACAG+AGG | - | tig0032904:19697-19716 | Msa1450430:intergenic | 35.0% | |
| AGACACTTATAATGAGATGG+AGG | + | tig0032904:19924-19943 | Msa1450430:intron | 35.0% | |
| GACACTTATAATGAGATGGA+GGG | + | tig0032904:19925-19944 | Msa1450430:intron | 35.0% | |
| ! | CTTTGAGAAACTTGTGTAGA+TGG | + | tig0032904:20149-20168 | Msa1450430:intron | 35.0% |
| GACCCTAAGTCATAGAAATT+AGG | - | tig0032904:20190-20209 | Msa1450430:intergenic | 35.0% | |
| ! | TCACCAGAAATGTTTTCTAG+GGG | - | tig0032904:20303-20322 | Msa1450430:intergenic | 35.0% |
| TCGACTGTTACAACAAACAT+AGG | + | tig0032904:20432-20451 | Msa1450430:intron | 35.0% | |
| TAGACTTTCTTTCTCTAGTG+TGG | - | tig0032904:20514-20533 | Msa1450430:intergenic | 35.0% | |
| ! | GGGTATGATTTTCAACTTTC+AGG | + | tig0032904:20647-20666 | Msa1450430:intron | 35.0% |
| TCAGAGGTCATGATAACAAA+AGG | - | tig0032904:20692-20711 | Msa1450430:intergenic | 35.0% | |
| !! | CTTTAAGAGTGTTACTTGTG+TGG | - | tig0032904:20774-20793 | Msa1450430:intergenic | 35.0% |
| ACAAGTAACACTCTTAAAGC+AGG | + | tig0032904:20775-20794 | Msa1450430:CDS | 35.0% | |
| ! | GGTATGTCTTTTATGTCTTG+TGG | + | tig0032904:20796-20815 | Msa1450430:intron | 35.0% |
| TTTGTCTACCCAAAGAGAAA+CGG | - | tig0032904:21054-21073 | Msa1450430:intergenic | 35.0% | |
| GAGCAGCTTATAGATCTTTA+AGG | + | tig0032904:21143-21162 | Msa1450430:intron | 35.0% | |
| CCGATATTTATAGTGTGACA+TGG | - | tig0032904:21290-21309 | Msa1450430:intergenic | 35.0% | |
| AAATATCGGGGTCAATTCTA+TGG | + | tig0032904:21301-21320 | Msa1450430:intron | 35.0% | |
| GAGATTTATTGATCCAATGG+TGG | - | tig0032904:21369-21388 | Msa1450430:intergenic | 35.0% | |
| GGTGAGATTTATTGATCCAA+TGG | - | tig0032904:21372-21391 | Msa1450430:intergenic | 35.0% | |
| ! | TGTGACTTTTGATCAAATGG+TGG | + | tig0032904:21413-21432 | Msa1450430:intron | 35.0% |
| AGAATTGGCAACCGATATTT+AGG | - | tig0032904:21492-21511 | Msa1450430:intergenic | 35.0% | |
| ! | GTATAATGCTGGGTTGAAAT+GGG | + | tig0032904:21628-21647 | Msa1450430:CDS | 35.0% |
| ACAGAAGTCCATTTGTATCT+TGG | - | tig0032904:21664-21683 | Msa1450430:intergenic | 35.0% | |
| ! | TACAAATGGACTTCTGTTCA+AGG | + | tig0032904:21667-21686 | Msa1450430:CDS | 35.0% |
| ! | TATCTTCCTTATTTCCCCAT+CGG | + | tig0032904:21721-21740 | Msa1450430:intron | 35.0% |
| AATATACCGATGGGGAAATA+AGG | - | tig0032904:21730-21749 | Msa1450430:intergenic | 35.0% | |
| AAGTATTAATTCGTGGATGC+AGG | + | tig0032904:21752-21771 | Msa1450430:intron | 35.0% | |
| AGAATTAACATGGTACTGCT+TGG | - | tig0032904:21808-21827 | Msa1450430:intergenic | 35.0% | |
| GTACTGCAAGAGAATTAACA+TGG | - | tig0032904:21818-21837 | Msa1450430:intergenic | 35.0% | |
| TTAATTCTCTTGCAGTACCT+CGG | + | tig0032904:21820-21839 | Msa1450430:CDS | 35.0% | |
| AAAGCAAAAGAAGCTATTGG+TGG | + | tig0032904:21843-21862 | Msa1450430:CDS | 35.0% | |
| AATCAACTTACCATCTGAGT+GGG | - | tig0032904:21883-21902 | Msa1450430:intergenic | 35.0% | |
| ACTATCGTCTTTGTCTATGA+GGG | - | tig0032904:21913-21932 | Msa1450430:intergenic | 35.0% | |
| ACACTTGCATCATAACACAT+AGG | + | tig0032904:21987-22006 | Msa1450430:intron | 35.0% | |
| ! | TTGGTTCGTTAAGATTTCAC+AGG | - | tig0032904:22085-22104 | Msa1450430:intergenic | 35.0% |
| GCACATGACATTAAAATGAC+AGG | + | tig0032904:22402-22421 | Msa1450430:intron | 35.0% | |
| TAAAATGACAGGAAGGTCTA+TGG | + | tig0032904:22413-22432 | Msa1450430:intron | 35.0% | |
| AAGGTCTATGGTGATAAATG+TGG | + | tig0032904:22425-22444 | Msa1450430:CDS | 35.0% | |
| ATGATGCAGTTCACTATGTA+AGG | - | tig0032904:22790-22809 | Msa1450430:intergenic | 35.0% | |
| !! | GACCAAGTTCTAAAATCAAC+TGG | - | tig0032904:22855-22874 | Msa1450430:intergenic | 35.0% |
| TTTGTGAGCTCTTCAATGTA+AGG | - | tig0032904:22877-22896 | Msa1450430:intergenic | 35.0% | |
| ATTGAAGAGCTCACAAAAAC+AGG | + | tig0032904:22880-22899 | Msa1450430:CDS | 35.0% | |
| ATGTTGTATTTACTCACTGC+AGG | + | tig0032904:23249-23268 | Msa1450430:intron | 35.0% | |
| ! | CGATTTAAATGCAGTTTTGC+TGG | - | tig0032904:23285-23304 | Msa1450430:intergenic | 35.0% |
| AAATGACATCACAGCATGTA+CGG | - | tig0032904:23474-23493 | Msa1450430:intergenic | 35.0% | |
| ! | ACATGCTGTGATGTCATTTA+TGG | + | tig0032904:23475-23494 | Msa1450430:intron | 35.0% |
| ACAATTACATAGGACCAGTT+AGG | - | tig0032904:23527-23546 | Msa1450430:intergenic | 35.0% | |
| CAAGCCCTTAACTTTCTAAA+AGG | + | tig0032904:24048-24067 | Msa1450430:intron | 35.0% | |
| !!! | TTTTATCTGAAGGTGCCAAA+AGG | + | tig0032904:24100-24119 | Msa1450430:intron | 35.0% |
| ! | CTATGGTATGGATTTCCTTT+TGG | - | tig0032904:24118-24137 | Msa1450430:intergenic | 35.0% |
| ! | AATGCTATTTGCACGATAGA+TGG | - | tig0032904:24161-24180 | Msa1450430:intergenic | 35.0% |
| AGATAACACTCAAAGCTCAA+AGG | + | tig0032904:24433-24452 | Msa1450430:intron | 35.0% | |
| TCAGGGAAGAAATTTCACAA+AGG | + | tig0032904:24528-24547 | Msa1450430:intron | 35.0% | |
| CAGGGAAGAAATTTCACAAA+GGG | + | tig0032904:24529-24548 | Msa1450430:intron | 35.0% | |
| AGGGAAGAAATTTCACAAAG+GGG | + | tig0032904:24530-24549 | Msa1450430:intron | 35.0% | |
| TTAGGTGATTTGAGCATGTA+CGG | + | tig0032904:24611-24630 | Msa1450430:intron | 35.0% | |
| CCATTGAAAATCTGCAATAC+TGG | - | tig0032904:24811-24830 | Msa1450430:intergenic | 35.0% | |
| ! | CCAGTATTGCAGATTTTCAA+TGG | + | tig0032904:24808-24827 | Msa1450430:CDS | 35.0% |
| !!! | ATTTTGGCTTCCATGTGATA+CGG | - | tig0032904:24855-24874 | Msa1450430:intergenic | 35.0% |
| TATCACATGGAAGCCAAAAT+GGG | + | tig0032904:24855-24874 | Msa1450430:CDS | 35.0% | |
| GAGTGTAGACTTATGAGAAA+TGG | - | tig0032904:24926-24945 | Msa1450430:intergenic | 35.0% | |
| TGAAAATCTTTCCGTAGATG+GGG | + | tig0032904:24972-24991 | Msa1450430:CDS | 35.0% | |
| !! | AAAAGTTGATAACAACGCTG+AGG | - | tig0032904:25171-25190 | Msa1450430:intergenic | 35.0% |
| GCATAGGTTATCATTAGGTA+TGG | + | tig0032904:25193-25212 | Msa1450430:intron | 35.0% | |
| !!! | ATGACTGGTTTTATCAAGTG+TGG | - | tig0032904:25311-25330 | Msa1450430:intergenic | 35.0% |
| ! | ATAGTGGTGGGGATAATTTA+TGG | - | tig0032904:25450-25469 | Msa1450430:intergenic | 35.0% |
| !! | TTTTTGAAGAGATAGTGGTG+GGG | - | tig0032904:25461-25480 | Msa1450430:intergenic | 35.0% |
| !! | CTTTTTGAAGAGATAGTGGT+GGG | - | tig0032904:25462-25481 | Msa1450430:intergenic | 35.0% |
| !! | ACTTTTTGAAGAGATAGTGG+TGG | - | tig0032904:25463-25482 | Msa1450430:intergenic | 35.0% |
| GACGAATCTTTGTAGTCAAT+TGG | - | tig0032904:25630-25649 | Msa1450430:intergenic | 35.0% | |
| GAAGAGAAATATTCTAAGCC+AGG | + | tig0032904:25705-25724 | Msa1450430:CDS | 35.0% | |
| TGTGAGCTATAAATTGGGTT+TGG | + | tig0032904:25815-25834 | Msa1450430:three_prime_UTR | 35.0% | |
| GTGAGCTATAAATTGGGTTT+GGG | + | tig0032904:25816-25835 | Msa1450430:three_prime_UTR | 35.0% | |
| !!! | TTGAAGGGTTTTTTGCACAA+TGG | + | tig0032904:25889-25908 | Msa1450430:three_prime_UTR | 35.0% |
| TTGTGCATTTATAGTCTGCA+AGG | + | tig0032904:25996-26015 | Msa1450430:three_prime_UTR | 35.0% | |
| CAAGCGTGCCAATATAAAAA+GGG | - | tig0032904:26038-26057 | Msa1450430:intergenic | 35.0% | |
| TCAAGCGTGCCAATATAAAA+AGG | - | tig0032904:26039-26058 | Msa1450430:intergenic | 35.0% | |
| GCATACACACACTTAACTTA+AGG | + | tig0032904:26068-26087 | Msa1450430:three_prime_UTR | 35.0% | |
| ! | ACTTAACTTAAGGGTGTGAA+TGG | + | tig0032904:26078-26097 | Msa1450430:three_prime_UTR | 35.0% |
| ATTCCAATTCCATTCCACCA+TGG | + | tig0032904:18228-18247 | Msa1450430:exon | 40.0% | |
| CGACAATTTCAACCTTCTCT+CGG | + | tig0032904:18264-18283 | Msa1450430:CDS | 40.0% | |
| AACTCTTGCTGAATGAATCG+AGG | - | tig0032904:18360-18379 | Msa1450430:intergenic | 40.0% | |
| TCGATTCATTCAGCAAGAGT+TGG | + | tig0032904:18359-18378 | Msa1450430:intron | 40.0% | |
| !! | GAAGAAAGCATTCTTCGATC+AGG | + | tig0032904:18455-18474 | Msa1450430:CDS | 40.0% |
| TATAAGCTTCCAAACCACCA+GGG | - | tig0032904:18591-18610 | Msa1450430:intergenic | 40.0% | |
| ATATAAGCTTCCAAACCACC+AGG | - | tig0032904:18592-18611 | Msa1450430:intergenic | 40.0% | |
| ! | GCTGGAAATAACCCTTTTGA+TGG | + | tig0032904:18646-18665 | Msa1450430:CDS | 40.0% |
| AGTGTATGCCGTGATTTGAT+TGG | + | tig0032904:18861-18880 | Msa1450430:intron | 40.0% | |
| TGCCGTGATTTGATTGGAAT+TGG | + | tig0032904:18867-18886 | Msa1450430:intron | 40.0% | |
| ! | ATGATTTTGCAGGTTCCAAC+TGG | + | tig0032904:18982-19001 | Msa1450430:intron | 40.0% |
| AATGTCAATGTCTCACCAGT+TGG | - | tig0032904:19000-19019 | Msa1450430:intergenic | 40.0% | |
| ACTGGTGAGACATTGACATT+TGG | + | tig0032904:19000-19019 | Msa1450430:CDS | 40.0% | |
| TTCATCAAATTCGAGGAAGC+AGG | + | tig0032904:19033-19052 | Msa1450430:CDS | 40.0% | |
| GTCATCCTAGTCTAAACACA+CGG | - | tig0032904:19488-19507 | Msa1450430:intergenic | 40.0% | |
| GTCTAGGTTACTCACTCATA+TGG | + | tig0032904:19537-19556 | Msa1450430:intron | 40.0% | |
| ! | CTCTCTCCTTTTGAATCAGA+GGG | + | tig0032904:19570-19589 | Msa1450430:intron | 40.0% |
| ! | TCATGCTTTGTTGTGATGGA+GGG | - | tig0032904:19650-19669 | Msa1450430:intergenic | 40.0% |
| ! | CTTCTCATGCTTTGTTGTGA+TGG | - | tig0032904:19654-19673 | Msa1450430:intergenic | 40.0% |
| CATCACAACAAAGCATGAGA+AGG | + | tig0032904:19652-19671 | Msa1450430:intron | 40.0% | |
| TGTGCTGAGATGCAATAACA+AGG | + | tig0032904:19820-19839 | Msa1450430:intron | 40.0% | |
| GTGCTGAGATGCAATAACAA+GGG | + | tig0032904:19821-19840 | Msa1450430:intron | 40.0% | |
| ! | TGCTTCTTGAAGTGCCAATA+TGG | - | tig0032904:20046-20065 | Msa1450430:intergenic | 40.0% |
| TAGCCCCTAGAAAACATTTC+TGG | + | tig0032904:20297-20316 | Msa1450430:intron | 40.0% | |
| AACAATAGCCTATCCTCTTG+TGG | + | tig0032904:20566-20585 | Msa1450430:intron | 40.0% | |
| ! | GATTTTCAACTTTCAGGCGA+AGG | + | tig0032904:20653-20672 | Msa1450430:intron | 40.0% |
| GTCTTGTGGAAAGTTCAATC+TGG | + | tig0032904:20810-20829 | Msa1450430:intron | 40.0% | |
| TTTGGGTAGACAAAACCTCA+TGG | + | tig0032904:21060-21079 | Msa1450430:intron | 40.0% | |
| TTGGGTAGACAAAACCTCAT+GGG | + | tig0032904:21061-21080 | Msa1450430:intron | 40.0% | |
| CATTCACTTCTTCATTCCAG+CGG | + | tig0032904:21096-21115 | Msa1450430:CDS | 40.0% | |
| ! | GGTATAATGCTGGGTTGAAA+TGG | + | tig0032904:21627-21646 | Msa1450430:intron | 40.0% |
| ! | ATAGCTTCTTTTGCTTTCCG+AGG | - | tig0032904:21840-21859 | Msa1450430:intergenic | 40.0% |
| CGGAAAGCAAAAGAAGCTAT+TGG | + | tig0032904:21840-21859 | Msa1450430:CDS | 40.0% | |
| AAGCTATTGGTGGAATTACC+AGG | + | tig0032904:21853-21872 | Msa1450430:CDS | 40.0% | |
| CAATCAACTTACCATCTGAG+TGG | - | tig0032904:21884-21903 | Msa1450430:intergenic | 40.0% | |
| CACTATCGTCTTTGTCTATG+AGG | - | tig0032904:21914-21933 | Msa1450430:intergenic | 40.0% | |
| !! | ATAGTGCTGAATGCTGATTC+TGG | + | tig0032904:21928-21947 | Msa1450430:intron | 40.0% |
| ! | GAGGGTATGAAAAAGCTACT+TGG | - | tig0032904:22104-22123 | Msa1450430:intergenic | 40.0% |
| AGATTGTCACTATGCAATCG+TGG | - | tig0032904:22820-22839 | Msa1450430:intergenic | 40.0% | |
| TGGGTTAACAAACTCCTGTA+TGG | - | tig0032904:22911-22930 | Msa1450430:intergenic | 40.0% | |
| GGCTGTTTGATTGTTATGCT+TGG | + | tig0032904:23496-23515 | Msa1450430:intron | 40.0% | |
| CATCACCTGCACAATTACAT+AGG | - | tig0032904:23537-23556 | Msa1450430:intergenic | 40.0% | |
| CTATGTAATTGTGCAGGTGA+TGG | + | tig0032904:23535-23554 | Msa1450430:intron | 40.0% | |
| ACCTGTGAAGAATAATGCTG+AGG | + | tig0032904:23577-23596 | Msa1450430:CDS | 40.0% | |
| TCCTCAGCATTATTCTTCAC+AGG | - | tig0032904:23581-23600 | Msa1450430:intergenic | 40.0% | |
| ATGGTATAAAGGTTGGGTGA+TGG | + | tig0032904:23783-23802 | Msa1450430:intron | 40.0% | |
| TCAAGACTTGCAGGTTACAA+GGG | - | tig0032904:24212-24231 | Msa1450430:intergenic | 40.0% | |
| TTCAAGACTTGCAGGTTACA+AGG | - | tig0032904:24213-24232 | Msa1450430:intergenic | 40.0% | |
| ! | TATTCTGTACGATGGACTCA+AGG | - | tig0032904:24340-24359 | Msa1450430:intergenic | 40.0% |
| !! | TTGAGTGGATTGGATTGCTT+TGG | + | tig0032904:24394-24413 | Msa1450430:intron | 40.0% |
| !! | TGAGTGGATTGGATTGCTTT+GGG | + | tig0032904:24395-24414 | Msa1450430:intron | 40.0% |
| GGGAAGAAATTTCACAAAGG+GGG | + | tig0032904:24531-24550 | Msa1450430:intron | 40.0% | |
| ATTTCACAAAGGGGGTTATC+AGG | + | tig0032904:24539-24558 | Msa1450430:intron | 40.0% | |
| TTTCACAAAGGGGGTTATCA+GGG | + | tig0032904:24540-24559 | Msa1450430:intron | 40.0% | |
| ! | GCAGATTTTCAATGGTCAAG+AGG | + | tig0032904:24816-24835 | Msa1450430:CDS | 40.0% |
| ATGGTCAAGAGGTTGAAGTT+TGG | + | tig0032904:24827-24846 | Msa1450430:CDS | 40.0% | |
| !!! | TTTTGGCTTCCATGTGATAC+GGG | - | tig0032904:24854-24873 | Msa1450430:intergenic | 40.0% |
| GTATCACATGGAAGCCAAAA+TGG | + | tig0032904:24854-24873 | Msa1450430:CDS | 40.0% | |
| ATCACATGGAAGCCAAAATG+GGG | + | tig0032904:24856-24875 | Msa1450430:CDS | 40.0% | |
| TCAATCAAGAGCAAAGTCAG+TGG | + | tig0032904:24892-24911 | Msa1450430:CDS | 40.0% | |
| TATGATAAGAGCCCCATCTA+CGG | - | tig0032904:24986-25005 | Msa1450430:intergenic | 40.0% | |
| ! | TAGGTATGGTTTTCGCCTAT+AGG | + | tig0032904:25207-25226 | Msa1450430:intron | 40.0% |
| AAATGCATCTTCAAGCCTTG+AGG | - | tig0032904:25740-25759 | Msa1450430:intergenic | 40.0% | |
| ! | AGATTAGCTCCACCTTGATT+AGG | + | tig0032904:25966-25985 | Msa1450430:three_prime_UTR | 40.0% |
| ! | GATTAGCTCCACCTTGATTA+GGG | + | tig0032904:25967-25986 | Msa1450430:three_prime_UTR | 40.0% |
| ATTAGCTCCACCTTGATTAG+GGG | + | tig0032904:25968-25987 | Msa1450430:three_prime_UTR | 40.0% | |
| AAAATTCCCCCTAATCAAGG+TGG | - | tig0032904:25978-25997 | Msa1450430:intergenic | 40.0% | |
| CACAAAATTCCCCCTAATCA+AGG | - | tig0032904:25981-26000 | Msa1450430:intergenic | 40.0% | |
| TGATCGACATAGTTACCGAC+CGG | + | tig0032904:18110-18129 | Msa1450430:five_prime_UTR | 45.0% | |
| GGAATGGAATTGGAATCGAG+AGG | - | tig0032904:18224-18243 | Msa1450430:intergenic | 45.0% | |
| ! | AAGCCATGGTGGAATGGAAT+TGG | - | tig0032904:18234-18253 | Msa1450430:intergenic | 45.0% |
| AAGGTTGAAATTGTCGCCGA+GGG | - | tig0032904:18260-18279 | Msa1450430:intergenic | 45.0% | |
| CAATAACGCCAAACGACTCT+TGG | + | tig0032904:18612-18631 | Msa1450430:CDS | 45.0% | |
| AAGGGGTGAAGCCATCAAAA+GGG | - | tig0032904:18660-18679 | Msa1450430:intergenic | 45.0% | |
| !!! | GCTGCTTTTGTTCTTGTTGC+TGG | + | tig0032904:19075-19094 | Msa1450430:CDS | 45.0% |
| ! | GCTTTTGTTCTTGTTGCTGG+CGG | + | tig0032904:19078-19097 | Msa1450430:CDS | 45.0% |
| ! | GTGAGCGTCTAGGATACAAT+GGG | + | tig0032904:19106-19125 | Msa1450430:CDS | 45.0% |
| AGAAGCCGTGTGTTTAGACT+AGG | + | tig0032904:19480-19499 | Msa1450430:intron | 45.0% | |
| TACTCACTCATATGGCACTG+TGG | + | tig0032904:19545-19564 | Msa1450430:intron | 45.0% | |
| ACTCACTCATATGGCACTGT+GGG | + | tig0032904:19546-19565 | Msa1450430:intron | 45.0% | |
| CCTCTGATTCAAAAGGAGAG+AGG | - | tig0032904:19572-19591 | Msa1450430:intergenic | 45.0% | |
| ! | CCTCTCTCCTTTTGAATCAG+AGG | + | tig0032904:19569-19588 | Msa1450430:intron | 45.0% |
| ! | CTCATGCTTTGTTGTGATGG+AGG | - | tig0032904:19651-19670 | Msa1450430:intergenic | 45.0% |
| !!! | CTTTTAGGTTGCTCTTCCAG+CGG | + | tig0032904:19978-19997 | Msa1450430:intron | 45.0% |
| CTTCAAGAAGCAAGCTCAGA+AGG | + | tig0032904:20054-20073 | Msa1450430:CDS | 45.0% | |
| ATGACCTCTGATGACACTCA+TGG | + | tig0032904:20701-20720 | Msa1450430:CDS | 45.0% | |
| TGACCTCTGATGACACTCAT+GGG | + | tig0032904:20702-20721 | Msa1450430:CDS | 45.0% | |
| GCTTAGACGATAATGATGCC+AGG | + | tig0032904:20885-20904 | Msa1450430:CDS | 45.0% | |
| TAATGATGCCAGGCTTGCAT+TGG | + | tig0032904:20895-20914 | Msa1450430:CDS | 45.0% | |
| ! | TTTTGGATCCAATGCAAGCC+TGG | - | tig0032904:20906-20925 | Msa1450430:intergenic | 45.0% |
| TAGACAAAACCTCATGGGCA+TGG | + | tig0032904:21066-21085 | Msa1450430:intron | 45.0% | |
| CCATACTTTCAGAATACCGC+TGG | - | tig0032904:21115-21134 | Msa1450430:intergenic | 45.0% | |
| ! | CCAGCGGTATTCTGAAAGTA+TGG | + | tig0032904:21112-21131 | Msa1450430:CDS | 45.0% |
| ! | CACAAGCTAGTTTCCACCAT+TGG | + | tig0032904:21353-21372 | Msa1450430:intron | 45.0% |
| TATCCACTTGCTCTCAGAAG+AGG | - | tig0032904:22468-22487 | Msa1450430:intergenic | 45.0% | |
| GAAGAGCTCACAAAAACAGG+AGG | + | tig0032904:22883-22902 | Msa1450430:CDS | 45.0% | |
| !! | AAAAACAGGAGGTGCCATAC+AGG | + | tig0032904:22894-22913 | Msa1450430:CDS | 45.0% |
| TCGGATGCAACAACAAAGCA+TGG | - | tig0032904:23021-23040 | Msa1450430:intergenic | 45.0% | |
| !! | TATGCTTGGTGCTACCTAAC+TGG | + | tig0032904:23510-23529 | Msa1450430:intron | 45.0% |
| CTGGTCCTATGTAATTGTGC+AGG | + | tig0032904:23529-23548 | Msa1450430:intron | 45.0% | |
| !! | TTGTGCAGGTGATGGAAACA+TGG | + | tig0032904:23543-23562 | Msa1450430:intron | 45.0% |
| TAATGCTGAGGATGCTGCTA+AGG | + | tig0032904:23589-23608 | Msa1450430:CDS | 45.0% | |
| TTTCTCCAGAGGTAGCACTA+TGG | - | tig0032904:24135-24154 | Msa1450430:intergenic | 45.0% | |
| ! | TAGTGCTACCTCTGGAGAAA+TGG | + | tig0032904:24135-24154 | Msa1450430:CDS | 45.0% |
| ATAGATGGCCATTTCTCCAG+AGG | - | tig0032904:24146-24165 | Msa1450430:intergenic | 45.0% | |
| TCACAGCATTCAAGACTTGC+AGG | - | tig0032904:24221-24240 | Msa1450430:intergenic | 45.0% | |
| AGTCTTGAATGCTGTGACAC+AGG | + | tig0032904:24224-24243 | Msa1450430:intron | 45.0% | |
| TCTAGCATCTTCGCTGCAAA+GGG | - | tig0032904:24583-24602 | Msa1450430:intergenic | 45.0% | |
| TTCTAGCATCTTCGCTGCAA+AGG | - | tig0032904:24584-24603 | Msa1450430:intergenic | 45.0% | |
| ! | TGCATTCTTTTTGCCCTTCC+AGG | + | tig0032904:24765-24784 | Msa1450430:intron | 45.0% |
| GCAATACTGGATCTGCTACT+TGG | - | tig0032904:24798-24817 | Msa1450430:intergenic | 45.0% | |
| ! | TTTGGCTTCCATGTGATACG+GGG | - | tig0032904:24853-24872 | Msa1450430:intergenic | 45.0% |
| ! | GAGAAAGTCAGACCCCATTT+TGG | - | tig0032904:24871-24890 | Msa1450430:intergenic | 45.0% |
| TAAGTCTACACTCGCGATCA+AGG | + | tig0032904:24933-24952 | Msa1450430:CDS | 45.0% | |
| AAGTCTACACTCGCGATCAA+GGG | + | tig0032904:24934-24953 | Msa1450430:CDS | 45.0% | |
| ATGCAGCAAAACACTCGTCA+AGG | - | tig0032904:25059-25078 | Msa1450430:intergenic | 45.0% | |
| GGGGGTAGTGTTAGGAAAAA+AGG | - | tig0032904:25144-25163 | Msa1450430:intergenic | 45.0% | |
| ATAACAACGCTGAGGAGTAG+GGG | - | tig0032904:25163-25182 | Msa1450430:intergenic | 45.0% | |
| GATAACAACGCTGAGGAGTA+GGG | - | tig0032904:25164-25183 | Msa1450430:intergenic | 45.0% | |
| TGATAACAACGCTGAGGAGT+AGG | - | tig0032904:25165-25184 | Msa1450430:intergenic | 45.0% | |
| AGGTGGTTCAGTTCAGAACA+AGG | + | tig0032904:25590-25609 | Msa1450430:CDS | 45.0% | |
| GGTGGTTCAGTTCAGAACAA+GGG | + | tig0032904:25591-25610 | Msa1450430:CDS | 45.0% | |
| GTTCAGTTCAGAACAAGGGT+TGG | + | tig0032904:25595-25614 | Msa1450430:CDS | 45.0% | |
| CCTCTGATTCTCAATACCTC+AGG | - | tig0032904:25657-25676 | Msa1450430:intergenic | 45.0% | |
| !! | CCTGAGGTATTGAGAATCAG+AGG | + | tig0032904:25654-25673 | Msa1450430:CDS | 45.0% |
| GTTACTCCACACAGAAACCT+AGG | - | tig0032904:25925-25944 | Msa1450430:intergenic | 45.0% | |
| TTAGCTCCACCTTGATTAGG+GGG | + | tig0032904:25969-25988 | Msa1450430:three_prime_UTR | 45.0% | |
| !!! | TTTTTTTTTATGAATTATAT+AGG | + | tig0032904:25560-25579 | Msa1450430:intron | 5.0% |
| GAAGGTTGAAATTGTCGCCG+AGG | - | tig0032904:18261-18280 | Msa1450430:intergenic | 50.0% | |
| AATCGCGGAAGAGATGGTCT+TGG | - | tig0032904:18407-18426 | Msa1450430:intergenic | 50.0% | |
| AAGACCATCTCTTCCGCGAT+TGG | + | tig0032904:18406-18425 | Msa1450430:CDS | 50.0% | |
| CTACTTGATTCCAGCTACCC+TGG | + | tig0032904:18571-18590 | Msa1450430:CDS | 50.0% | |
| GGAATCAGCCAAGAGTCGTT+TGG | - | tig0032904:18623-18642 | Msa1450430:intergenic | 50.0% | |
| ! | CTCTTGGCTGATTCCAAAGC+TGG | + | tig0032904:18628-18647 | Msa1450430:CDS | 50.0% |
| GAAGGGGTGAAGCCATCAAA+AGG | - | tig0032904:18661-18680 | Msa1450430:intergenic | 50.0% | |
| GTTTGTGCATGTTCGGGGAA+TGG | + | tig0032904:18936-18955 | Msa1450430:intron | 50.0% | |
| ! | GGTGAGCGTCTAGGATACAA+TGG | + | tig0032904:19105-19124 | Msa1450430:CDS | 50.0% |
| TCTTCCAGCGGAAACAACGA+CGG | + | tig0032904:19990-20009 | Msa1450430:CDS | 50.0% | |
| GGTGGAAAGACACTTGTGCA+TGG | + | tig0032904:21431-21450 | Msa1450430:intron | 50.0% | |
| CAGGCAATTCCATCAGCACT+GGG | + | tig0032904:21771-21790 | Msa1450430:intron | 50.0% | |
| ! | GATCCTCTTCTGAGAGCAAG+TGG | + | tig0032904:22462-22481 | Msa1450430:CDS | 50.0% |
| AGAGCAAGTGGATACCCTGA+CGG | + | tig0032904:22474-22493 | Msa1450430:CDS | 50.0% | |
| AAAAGGCGAATTCCACGGCT+GGG | - | tig0032904:22594-22613 | Msa1450430:intergenic | 50.0% | |
| AAAAAGGCGAATTCCACGGC+TGG | - | tig0032904:22595-22614 | Msa1450430:intergenic | 50.0% | |
| ! | GCAGATGGGGGCAATGTTTT+TGG | - | tig0032904:23341-23360 | Msa1450430:intergenic | 50.0% |
| ATTTACCGTGAAGCCAACCC+TGG | - | tig0032904:23363-23382 | Msa1450430:intergenic | 50.0% | |
| ! | AGGTTGGGTGATGGTGTCTT+AGG | + | tig0032904:23792-23811 | Msa1450430:intron | 50.0% |
| CCAGAGGTAGCACTATGGTA+TGG | - | tig0032904:24130-24149 | Msa1450430:intergenic | 50.0% | |
| CCATACCATAGTGCTACCTC+TGG | + | tig0032904:24127-24146 | Msa1450430:CDS | 50.0% | |
| TAGCATCTTCGCTGCAAAGG+GGG | - | tig0032904:24581-24600 | Msa1450430:intergenic | 50.0% | |
| CTAGCATCTTCGCTGCAAAG+GGG | - | tig0032904:24582-24601 | Msa1450430:intergenic | 50.0% | |
| ! | TTCTTTTTGCCCTTCCAGGC+TGG | + | tig0032904:24769-24788 | Msa1450430:intron | 50.0% |
| ACTTGGAAACCAGCCTGGAA+GGG | - | tig0032904:24781-24800 | Msa1450430:intergenic | 50.0% | |
| TACTTGGAAACCAGCCTGGA+AGG | - | tig0032904:24782-24801 | Msa1450430:intergenic | 50.0% | |
| AAGTTTGGCCCCGTATCACA+TGG | + | tig0032904:24842-24861 | Msa1450430:CDS | 50.0% | |
| GAATACCTCTGCATCGTCGA+CGG | - | tig0032904:25013-25032 | Msa1450430:intergenic | 50.0% | |
| TAACAACGCTGAGGAGTAGG+GGG | - | tig0032904:25162-25181 | Msa1450430:intergenic | 50.0% | |
| CAAAGATTCGTCAGAGCCTG+AGG | + | tig0032904:25638-25657 | Msa1450430:CDS | 50.0% | |
| GCCAGGCAAATTTCACCTCA+AGG | + | tig0032904:25722-25741 | Msa1450430:CDS | 50.0% | |
| GCCTTGAGGTGAAATTTGCC+TGG | - | tig0032904:25726-25745 | Msa1450430:intergenic | 50.0% | |
| ACACAGAAACCTAGGTGGGA+GGG | - | tig0032904:25917-25936 | Msa1450430:intergenic | 50.0% | |
| CTCCACACAGAAACCTAGGT+GGG | - | tig0032904:25921-25940 | Msa1450430:intergenic | 50.0% | |
| ACTCCACACAGAAACCTAGG+TGG | - | tig0032904:25922-25941 | Msa1450430:intergenic | 50.0% | |
| GACATAGTTACCGACCGGCA+CGG | + | tig0032904:18115-18134 | Msa1450430:five_prime_UTR | 55.0% | |
| !! | GTTTATTAGCGGTGCCGTGC+CGG | - | tig0032904:18132-18151 | Msa1450430:intergenic | 55.0% |
| GTTGAAATTGTCGCCGAGGG+AGG | - | tig0032904:18257-18276 | Msa1450430:intergenic | 55.0% | |
| CAACCTTCTCTCGGCGAAAC+AGG | + | tig0032904:18273-18292 | Msa1450430:CDS | 55.0% | |
| GAACCTGTTTCGCCGAGAGA+AGG | - | tig0032904:18279-18298 | Msa1450430:intergenic | 55.0% | |
| CTTGATTCCAGCTACCCTGG+TGG | + | tig0032904:18574-18593 | Msa1450430:CDS | 55.0% | |
| TTCCAGCTACCCTGGTGGTT+TGG | + | tig0032904:18579-18598 | Msa1450430:CDS | 55.0% | |
| TTCCAAACCACCAGGGTAGC+TGG | - | tig0032904:18584-18603 | Msa1450430:intergenic | 55.0% | |
| GTTCTTGTTGCTGGCGGTCT+TGG | + | tig0032904:19084-19103 | Msa1450430:CDS | 55.0% | |
| CTTCCAGCGGAAACAACGAC+GGG | + | tig0032904:19991-20010 | Msa1450430:CDS | 55.0% | |
| ACGCCCATGAGTGTCATCAG+AGG | - | tig0032904:20708-20727 | Msa1450430:intergenic | 55.0% | |
| GCAGGCAATTCCATCAGCAC+TGG | + | tig0032904:21770-21789 | Msa1450430:intron | 55.0% | |
| ! | GAACTGACACCCAGTGCTGA+TGG | - | tig0032904:21783-21802 | Msa1450430:intergenic | 55.0% |
| CGCTGTTGACATCACCGTCA+GGG | - | tig0032904:22491-22510 | Msa1450430:intergenic | 55.0% | |
| TCGCTGTTGACATCACCGTC+AGG | - | tig0032904:22492-22511 | Msa1450430:intergenic | 55.0% | |
| GGTGATGTCAACAGCGAGAC+CGG | + | tig0032904:22495-22514 | Msa1450430:CDS | 55.0% | |
| TCCTGGAAATGGGGAGTAGC+CGG | - | tig0032904:22517-22536 | Msa1450430:intergenic | 55.0% | |
| AAACATTGCCCCCATCTGCC+AGG | + | tig0032904:23342-23361 | Msa1450430:CDS | 55.0% | |
| AACATTGCCCCCATCTGCCA+GGG | + | tig0032904:23343-23362 | Msa1450430:CDS | 55.0% | |
| TGAAGCCAACCCTGGCAGAT+GGG | - | tig0032904:23355-23374 | Msa1450430:intergenic | 55.0% | |
| !! | ATCTGCCAGGGTTGGCTTCA+CGG | + | tig0032904:23355-23374 | Msa1450430:CDS | 55.0% |
| ! | CTGCTACTTGGAAACCAGCC+TGG | - | tig0032904:24786-24805 | Msa1450430:intergenic | 55.0% |
| GAGGAGTAGGGGGTAGTGTT+AGG | - | tig0032904:25152-25171 | Msa1450430:intergenic | 55.0% | |
| CACACAGAAACCTAGGTGGG+AGG | - | tig0032904:25918-25937 | Msa1450430:intergenic | 55.0% | |
| CTCCCACCTAGGTTTCTGTG+TGG | + | tig0032904:25916-25935 | Msa1450430:three_prime_UTR | 55.0% | |
| ! | GGGAGGAAGCCATGGTGGAA+TGG | - | tig0032904:18240-18259 | Msa1450430:intergenic | 60.0% |
| TCCACCATGGCTTCCTCCCT+CGG | + | tig0032904:18241-18260 | Msa1450430:exon | 60.0% | |
| CCATCTCTTCCGCGATTGGC+CGG | + | tig0032904:18410-18429 | Msa1450430:CDS | 60.0% | |
| ! | GTTCCCGTCGTTGTTTCCGC+TGG | - | tig0032904:19997-20016 | Msa1450430:intergenic | 60.0% |
| TGCACATCGCCATGCCCATG+AGG | - | tig0032904:21078-21097 | Msa1450430:intergenic | 60.0% | |
| ACCAGGCTCACCCACTCAGA+TGG | + | tig0032904:21870-21889 | Msa1450430:CDS | 60.0% | |
| ACCATCTGAGTGGGTGAGCC+TGG | - | tig0032904:21874-21893 | Msa1450430:intergenic | 60.0% | |
| ACCGGCTACTCCCCATTTCC+AGG | + | tig0032904:22513-22532 | Msa1450430:CDS | 60.0% | |
| AAGCCAACCCTGGCAGATGG+GGG | - | tig0032904:23353-23372 | Msa1450430:intergenic | 60.0% | |
| GAAGCCAACCCTGGCAGATG+GGG | - | tig0032904:23354-23373 | Msa1450430:intergenic | 60.0% | |
| GTGAAGCCAACCCTGGCAGA+TGG | - | tig0032904:23356-23375 | Msa1450430:intergenic | 60.0% | |
| AGATGCCGTCGACGATGCAG+AGG | + | tig0032904:25005-25024 | Msa1450430:CDS | 60.0% | |
| ACAATGGCACCCTCCCACCT+AGG | + | tig0032904:25905-25924 | Msa1450430:three_prime_UTR | 60.0% | |
| !! | ATTAGCGGTGCCGTGCCGGT+CGG | - | tig0032904:18128-18147 | Msa1450430:intergenic | 65.0% |
| CCGGCCAATCGCGGAAGAGA+TGG | - | tig0032904:18413-18432 | Msa1450430:intergenic | 65.0% | |
| TTCTCGTCGTCGTCGACGCC+AGG | - | tig0032904:18438-18457 | Msa1450430:intergenic | 65.0% | |
| GGCGGTCTTGGTGAGCGTCT+AGG | + | tig0032904:19096-19115 | Msa1450430:CDS | 65.0% | |
| ATCATCCTCCCTCCCAGCCG+TGG | + | tig0032904:22579-22598 | Msa1450430:intron | 65.0% | |
| GAATTCCACGGCTGGGAGGG+AGG | - | tig0032904:22587-22606 | Msa1450430:intergenic | 65.0% | |
| GGCGAATTCCACGGCTGGGA+GGG | - | tig0032904:22590-22609 | Msa1450430:intergenic | 65.0% | |
| AGGCGAATTCCACGGCTGGG+AGG | - | tig0032904:22591-22610 | Msa1450430:intergenic | 65.0% | |
| TTGCCCCCATCTGCCAGGGT+TGG | + | tig0032904:23347-23366 | Msa1450430:CDS | 65.0% | |
| GCCGAGGGAGGAAGCCATGG+TGG | - | tig0032904:18245-18264 | Msa1450430:intergenic | 70.0% | |
| GTCGCCGAGGGAGGAAGCCA+TGG | - | tig0032904:18248-18267 | Msa1450430:intergenic | 70.0% | |
| ! | TTCCGCGATTGGCCGGCACC+TGG | + | tig0032904:18417-18436 | Msa1450430:CDS | 70.0% |
| TCGTCGTCGACGCCAGGTGC+CGG | - | tig0032904:18432-18451 | Msa1450430:intergenic | 70.0% | |
| !! | CGCCAGGTGCCGGCCAATCG+CGG | - | tig0032904:18422-18441 | Msa1450430:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0032904 | gene | 18105 | 26109 | 18105 | ID=Msa1450430;Name=Msa1450430 |
| tig0032904 | mRNA | 18105 | 26109 | 18105 | ID=Msa1450430-mRNA-1;Parent=Msa1450430;Name=Msa1450430-mRNA-1;_AED=0.11;_eAED=0.11;_QI=142|1|1|1|1|1|17|360|600 |
| tig0032904 | exon | 18105 | 18294 | 18105 | ID=Msa1450430-mRNA-1:exon:17445;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 18372 | 18476 | 18372 | ID=Msa1450430-mRNA-1:exon:17446;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 18565 | 18681 | 18565 | ID=Msa1450430-mRNA-1:exon:17447;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 18994 | 19134 | 18994 | ID=Msa1450430-mRNA-1:exon:17448;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 19985 | 20075 | 19985 | ID=Msa1450430-mRNA-1:exon:17449;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 20669 | 20796 | 20669 | ID=Msa1450430-mRNA-1:exon:17450;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 20872 | 20943 | 20872 | ID=Msa1450430-mRNA-1:exon:17451;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 21069 | 21133 | 21069 | ID=Msa1450430-mRNA-1:exon:17452;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 21628 | 21688 | 21628 | ID=Msa1450430-mRNA-1:exon:17453;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 21774 | 21891 | 21774 | ID=Msa1450430-mRNA-1:exon:17454;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 22424 | 22548 | 22424 | ID=Msa1450430-mRNA-1:exon:17455;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 22856 | 22932 | 22856 | ID=Msa1450430-mRNA-1:exon:17456;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 23271 | 23376 | 23271 | ID=Msa1450430-mRNA-1:exon:17457;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 23551 | 23610 | 23551 | ID=Msa1450430-mRNA-1:exon:17458;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 24112 | 24192 | 24112 | ID=Msa1450430-mRNA-1:exon:17459;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 24787 | 25026 | 24787 | ID=Msa1450430-mRNA-1:exon:17460;Parent=Msa1450430-mRNA-1 |
| tig0032904 | exon | 25582 | 26109 | 25582 | ID=Msa1450430-mRNA-1:exon:17461;Parent=Msa1450430-mRNA-1 |
| tig0032904 | five_prime_UTR | 18105 | 18246 | 18105 | ID=Msa1450430-mRNA-1:five_prime_utr;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 18247 | 18294 | 18247 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 18372 | 18476 | 18372 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 18565 | 18681 | 18565 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 18994 | 19134 | 18994 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 19985 | 20075 | 19985 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 20669 | 20796 | 20669 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 20872 | 20943 | 20872 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 21069 | 21133 | 21069 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 21628 | 21688 | 21628 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 21774 | 21891 | 21774 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 22424 | 22548 | 22424 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 22856 | 22932 | 22856 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 23271 | 23376 | 23271 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 23551 | 23610 | 23551 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 24112 | 24192 | 24112 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 24787 | 25026 | 24787 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | CDS | 25582 | 25749 | 25582 | ID=Msa1450430-mRNA-1:cds;Parent=Msa1450430-mRNA-1 |
| tig0032904 | three_prime_UTR | 25750 | 26109 | 25750 | ID=Msa1450430-mRNA-1:three_prime_utr;Parent=Msa1450430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
