AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0626490


Find 108 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr4_3 gene 6076785 6080802 6076785 ID=Msa0626490;Name=Msa0626490
chr4_3 mRNA 6076785 6080802 6076785 ID=Msa0626490-mRNA-1;Parent=Msa0626490;Name=Msa0626490-mRNA-1;_AED=0.07;_eAED=0.07;_QI=167|1|1|1|1|1|6|337|419
chr4_3 exon 6076785 6077400 6076785 ID=Msa0626490-mRNA-1:exon:1776;Parent=Msa0626490-mRNA-1
chr4_3 exon 6077738 6078320 6077738 ID=Msa0626490-mRNA-1:exon:1775;Parent=Msa0626490-mRNA-1
chr4_3 exon 6078459 6078544 6078459 ID=Msa0626490-mRNA-1:exon:1774;Parent=Msa0626490-mRNA-1
chr4_3 exon 6079160 6079230 6079160 ID=Msa0626490-mRNA-1:exon:1773;Parent=Msa0626490-mRNA-1
chr4_3 exon 6079342 6079480 6079342 ID=Msa0626490-mRNA-1:exon:1772;Parent=Msa0626490-mRNA-1
chr4_3 exon 6080534 6080802 6080534 ID=Msa0626490-mRNA-1:exon:1771;Parent=Msa0626490-mRNA-1
chr4_3 five_prime_UTR 6080636 6080802 6080636 ID=Msa0626490-mRNA-1:five_prime_utr;Parent=Msa0626490-mRNA-1
chr4_3 CDS 6080534 6080635 6080534 ID=Msa0626490-mRNA-1:cds;Parent=Msa0626490-mRNA-1
chr4_3 CDS 6079342 6079480 6079342 ID=Msa0626490-mRNA-1:cds;Parent=Msa0626490-mRNA-1
chr4_3 CDS 6079160 6079230 6079160 ID=Msa0626490-mRNA-1:cds;Parent=Msa0626490-mRNA-1
chr4_3 CDS 6078459 6078544 6078459 ID=Msa0626490-mRNA-1:cds;Parent=Msa0626490-mRNA-1
chr4_3 CDS 6077738 6078320 6077738 ID=Msa0626490-mRNA-1:cds;Parent=Msa0626490-mRNA-1
chr4_3 CDS 6077122 6077400 6077122 ID=Msa0626490-mRNA-1:cds;Parent=Msa0626490-mRNA-1
chr4_3 three_prime_UTR 6076785 6077121 6076785 ID=Msa0626490-mRNA-1:three_prime_utr;Parent=Msa0626490-mRNA-1
Gene Sequence

>Msa0626490

ATGGGTTTTGATTTGAGACAAGTAGTTGCTGGTATCCTCACTCTCACTATGTTTGTTATGCTTATCCATATGATTAAAAGAGACCATTTTGATTCTGTTCAAGATAATAAATTTCCAGGATCAACAGATGATGCAACCTATGAAAATGTAAAGATGGATACTACACATGTAAGAAAGAATATAGGGCTTTGGAAGGGAGATACTGACGAGTTAAAACCGTGTTGGGTTAAGCCGTCTGGAGACGAAGTGGAGCAGACAGACGGGTTTGTTACCTTTTCATTAACCAATGGTCCAGAGTACCACCTATCTCAGATAGCAGATGCAGTAATTGTGGCTAGATATCTCGGAGCATCACTTGTGATCCCTGACATTAGAGGAAGCCAACCTGGTGACAAGAGGAACTTTGAGGATATTTATGATGTTGACGTGTTCATGAAAAGCATGGAAGGAGTGGTCAAAGTGGTAAAAGATCTTCCTTCTCATGTAACAACTAAAAAAATTGCTGCTGTGAAGGTCCCTAACCGGGTTACCGAAGATTACATAGCTCGACACGTCGAACCAATTTATAGATCAAAGGGAAACGTAAGGCTAGCGACTTACTTTCCTTCAATAAACATGAGAAAGTCAGGGAAAAAAGGTGACACTGATTCCATTGCATGCTTAGCAATGTATGGAAGTTTGGAGTTGCAGCCGGAAATACATGATCTTGTCGACTCAATGGTTGAAAGGCTTAGAACTTTAAGCCGAAAATCAGACGGTCAATTTATTGCTGTGGATTTGAGAGTTGAGATGTTGAACAAGAAAGGTTGCCAAGGAAATGATGATAATGATGGAGAGAAGACCTGTTTCAATGCACAAGAGATTGCAGTGTTTTTGAGAAAGATTGGTATTGATAAGGATACCACAATTTATTTGACACAATCAAGGTGGGATGATAGCCTTGATTCTCTTAAGGACCTGTTTCCTAAAACTTACACGAAGGAGTCAATCATGCCGGCGGATAAGAAGACAAAGTTCCTAGATTCTAAAGATTCTGAATTGGAGAATGTGATTGACTTTTACATTAGTACCGAGAGTGATGTTTTTGTACCAGCAATTTCGGGTCTATTGTATGCGAACGTAGCTGGTAAAAGGATCGGTTCTGGTAAAACACAAATATTGGTTCCAGCCGTAATTTCAGATTCATCGGCTTCAGCAACAAGTTTCTTGTCCCCTTATATCTCCAAGAAAAACCACTTTGCATATTCTTGTTATTGTTAG

Protein sequence

>Msa0626490

MGFDLRQVVAGILTLTMFVMLIHMIKRDHFDSVQDNKFPGSTDDATYENVKMDTTHVRKNIGLWKGDTDELKPCWVKPSGDEVEQTDGFVTFSLTNGPEYHLSQIADAVIVARYLGASLVIPDIRGSQPGDKRNFEDIYDVDVFMKSMEGVVKVVKDLPSHVTTKKIAAVKVPNRVTEDYIARHVEPIYRSKGNVRLATYFPSINMRKSGKKGDTDSIACLAMYGSLELQPEIHDLVDSMVERLRTLSRKSDGQFIAVDLRVEMLNKKGCQGNDDNDGEKTCFNAQEIAVFLRKIGIDKDTTIYLTQSRWDDSLDSLKDLFPKTYTKESIMPADKKTKFLDSKDSELENVIDFYISTESDVFVPAISGLLYANVAGKRIGSGKTQILVPAVISDSSASATSFLSPYISKKNHFAYSCYC*