AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1456890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1456890 MtrunA17_Chr2g0316931 95.714 210 4 2 1 209 1 206 2.27e-142 395
Msa1456890 MtrunA17_Chr2g0282651 61.017 118 38 1 8 117 48 165 4.50e-37 129
Msa1456890 MtrunA17_Chr5g0438831 68.235 85 27 0 8 92 24 108 6.36e-34 122
Msa1456890 MtrunA17_Chr5g0438801 67.857 84 27 0 26 109 47 130 1.00e-33 121
Msa1456890 MtrunA17_Chr2g0282621 44.503 191 77 8 19 205 4 169 8.04e-32 114
Msa1456890 MtrunA17_Chr3g0099871 66.667 93 25 2 4 94 3 91 6.34e-31 113
Msa1456890 MtrunA17_Chr7g0221471 55.056 89 40 0 16 104 37 125 7.37e-29 106
Msa1456890 MtrunA17_Chr7g0221501 66.197 71 24 0 16 86 37 107 2.84e-28 104
Msa1456890 MtrunA17_Chr8g0383591 57.500 80 34 0 17 96 132 211 1.58e-26 103
Msa1456890 MtrunA17_Chr8g0367911 75.410 61 15 0 28 88 42 102 5.01e-26 101
Msa1456890 MtrunA17_Chr1g0184081 69.118 68 20 1 26 92 17 84 6.42e-26 97.8
Msa1456890 MtrunA17_Chr1g0186731 66.176 68 22 1 21 87 12 79 7.07e-26 97.8
Msa1456890 MtrunA17_Chr4g0044911 78.947 57 12 0 30 86 96 152 7.52e-26 100
Msa1456890 MtrunA17_Chr1g0195151 69.231 65 20 0 23 87 70 134 8.22e-26 101
Msa1456890 MtrunA17_Chr4g0044901 70.769 65 19 0 30 94 96 160 8.26e-26 99.8
Msa1456890 MtrunA17_Chr4g0044881 73.770 61 16 0 26 86 110 170 1.42e-25 99.4
Msa1456890 MtrunA17_Chr4g0044871 77.193 57 13 0 30 86 96 152 2.09e-25 99.0
Msa1456890 MtrunA17_Chr5g0412641 77.049 61 14 0 28 88 44 104 2.60e-25 101
Msa1456890 MtrunA17_Chr2g0334031 65.714 70 18 1 23 86 104 173 5.65e-25 100
Msa1456890 MtrunA17_Chr7g0252381 46.032 126 37 3 29 128 41 161 1.05e-24 98.2
Msa1456890 MtrunA17_Chr2g0283171 56.667 90 30 3 6 86 31 120 1.42e-24 94.7
Msa1456890 MtrunA17_Chr8g0344961 69.355 62 19 0 25 86 119 180 1.54e-24 99.4
Msa1456890 MtrunA17_Chr2g0283181 57.303 89 30 2 27 114 146 227 1.98e-24 97.4
Msa1456890 MtrunA17_Chr2g0295421 59.740 77 30 1 10 86 77 152 2.23e-24 96.7
Msa1456890 MtrunA17_Chr4g0055801 55.914 93 35 3 3 91 124 214 3.94e-24 97.1
Msa1456890 MtrunA17_Chr8g0375031 51.807 83 39 1 23 104 118 200 5.57e-24 95.1
Msa1456890 MtrunA17_Chr2g0286161 52.273 88 38 1 29 116 49 132 9.85e-24 95.9
Msa1456890 MtrunA17_Chr4g0055781 51.402 107 43 5 3 104 72 174 1.67e-23 94.4
Msa1456890 MtrunA17_Chr1g0170531 72.881 59 15 1 29 86 88 146 1.70e-23 94.0
Msa1456890 MtrunA17_Chr7g0261101 59.494 79 27 2 21 94 11 89 2.09e-23 91.3
Msa1456890 MtrunA17_Chr4g0046161 54.878 82 36 1 9 89 36 117 2.17e-23 90.5
Msa1456890 MtrunA17_Chr8g0335311 65.079 63 21 1 29 90 95 157 2.20e-23 92.8
Msa1456890 MtrunA17_Chr2g0297331 67.692 65 20 1 23 86 7 71 2.48e-23 90.9
Msa1456890 MtrunA17_Chr7g0261151 69.355 62 18 1 26 86 16 77 3.36e-23 90.5
Msa1456890 MtrunA17_Chr8g0335331 65.152 66 22 1 26 90 121 186 4.25e-23 92.0
Msa1456890 MtrunA17_Chr4g0002631 68.966 58 18 0 29 86 7 64 5.05e-23 91.7
Msa1456890 MtrunA17_Chr5g0396911 57.317 82 28 1 29 110 111 185 6.26e-23 94.0
Msa1456890 MtrunA17_Chr3g0137174 67.241 58 19 0 29 86 7 64 6.72e-23 91.3
Msa1456890 MtrunA17_Chr1g0158971 68.254 63 20 0 27 89 112 174 7.01e-23 94.4
Msa1456890 MtrunA17_Chr4g0066931 70.175 57 17 0 29 85 52 108 1.36e-22 93.6
Msa1456890 MtrunA17_Chr8g0387801 59.459 74 28 1 29 100 106 179 2.09e-22 92.4
Msa1456890 MtrunA17_Chr7g0250721 50.526 95 34 3 5 86 24 118 3.11e-22 89.7
Msa1456890 MtrunA17_Chr5g0438841 58.108 74 31 0 20 93 6 79 3.12e-22 89.0
Msa1456890 MtrunA17_Chr8g0335321 58.333 72 26 2 29 99 95 163 5.50e-22 89.4
Msa1456890 MtrunA17_Chr1g0186671 60.606 66 25 1 28 92 17 82 5.63e-22 87.4
Msa1456890 MtrunA17_Chr7g0250711 67.742 62 19 1 29 89 59 120 5.67e-22 89.4
Msa1456890 MtrunA17_Chr3g0126321 65.000 60 21 0 29 88 112 171 6.78e-22 91.7
Msa1456890 MtrunA17_Chr7g0250731 71.186 59 16 1 29 86 60 118 7.15e-22 89.0
Msa1456890 MtrunA17_Chr4g0055761 69.492 59 17 1 29 86 144 202 1.55e-21 89.4
Msa1456890 MtrunA17_Chr4g0017851 58.730 63 26 0 30 92 118 180 2.27e-21 89.7
Msa1456890 MtrunA17_Chr4g0062551 50.000 88 41 1 3 90 29 113 2.52e-21 85.9
Msa1456890 MtrunA17_Chr4g0040411 33.803 213 83 5 18 207 16 193 5.90e-21 86.3
Msa1456890 MtrunA17_Chr4g0062161 50.000 88 41 1 3 90 29 113 6.58e-21 86.3
Msa1456890 MtrunA17_Chr2g0324131 42.373 118 66 2 7 124 196 311 7.34e-21 89.4
Msa1456890 MtrunA17_Chr4g0063751 54.762 84 30 2 29 104 6 89 7.43e-21 86.3
Msa1456890 MtrunA17_Chr3g0115631 67.241 58 19 0 30 87 150 207 7.57e-21 88.6
Msa1456890 MtrunA17_Chr2g0333011 61.290 62 24 0 29 90 6 67 1.07e-20 85.1
Msa1456890 MtrunA17_Chr1g0186681 55.882 68 28 1 27 92 16 83 1.91e-20 83.2
Msa1456890 MtrunA17_Chr4g0003421 62.903 62 23 0 26 87 36 97 2.17e-20 85.9
Msa1456890 MtrunA17_Chr8g0382491 64.912 57 20 0 30 86 113 169 3.59e-20 85.9
Msa1456890 MtrunA17_Chr5g0425561 65.517 58 20 0 30 87 173 230 3.65e-20 87.0
Msa1456890 MtrunA17_Chr1g0196871 68.966 58 17 1 30 86 16 73 4.07e-20 81.3
Msa1456890 MtrunA17_Chr1g0200931 59.701 67 26 1 24 89 17 83 4.26e-20 82.4
Msa1456890 MtrunA17_Chr5g0432821 37.795 127 66 1 18 144 112 225 5.93e-20 85.5
Msa1456890 MtrunA17_Chr6g0461271 52.564 78 26 1 29 95 32 109 7.80e-20 85.5
Msa1456890 MtrunA17_Chr7g0253424 47.619 84 44 0 8 91 17 100 9.28e-20 84.7
Msa1456890 MtrunA17_Chr4g0026881 67.241 58 18 1 30 86 97 154 1.22e-19 83.6
Msa1456890 MtrunA17_Chr7g0217991 68.421 57 18 0 29 85 41 97 1.55e-19 85.9
Msa1456890 MtrunA17_Chr1g0183961 63.380 71 25 1 27 96 24 94 1.67e-19 81.3
Msa1456890 MtrunA17_Chr1g0150691 41.803 122 52 4 6 114 4 119 1.89e-19 82.8
Msa1456890 MtrunA17_Chr6g0453661 66.667 57 19 0 29 85 37 93 3.61e-19 84.7
Msa1456890 MtrunA17_Chr1g0196781 45.833 96 45 2 30 124 152 241 4.56e-19 83.6
Msa1456890 MtrunA17_Chr1g0150631 36.774 155 73 6 10 139 13 167 4.96e-19 82.0
Msa1456890 MtrunA17_Chr7g0261181 60.563 71 27 1 20 89 3 73 6.01e-19 79.3
Msa1456890 MtrunA17_Chr2g0301191 60.345 58 23 0 30 87 19 76 6.05e-19 81.3
Msa1456890 MtrunA17_Chr1g0150671 48.810 84 36 2 9 91 31 108 7.14e-19 82.4
Msa1456890 MtrunA17_Chr5g0437371 60.000 60 24 0 26 85 62 121 7.27e-19 83.2
Msa1456890 MtrunA17_Chr8g0350701 63.158 57 21 0 29 85 26 82 7.48e-19 82.8
Msa1456890 MtrunA17_Chr7g0257911 61.017 59 23 0 28 86 29 87 9.63e-19 82.0
Msa1456890 MtrunA17_Chr2g0301171 43.333 120 54 4 30 140 19 133 1.19e-18 80.5
Msa1456890 MtrunA17_Chr1g0150661 45.882 85 44 2 8 91 14 97 1.33e-18 80.5
Msa1456890 MtrunA17_Chr1g0183981 66.667 57 18 1 30 85 75 131 1.42e-18 80.5
Msa1456890 MtrunA17_Chr1g0184071 54.217 83 33 3 8 85 43 125 1.55e-18 79.3
Msa1456890 MtrunA17_Chr6g0486701 61.404 57 22 0 30 86 44 100 1.56e-18 80.5
Msa1456890 MtrunA17_Chr7g0275841 55.738 61 27 0 30 90 28 88 1.61e-18 79.3
Msa1456890 MtrunA17_Chr8g0334801 61.404 57 22 0 30 86 52 108 1.70e-18 80.1
Msa1456890 MtrunA17_Chr2g0301181 54.167 72 32 1 30 100 19 90 1.71e-18 80.5
Msa1456890 MtrunA17_Chr1g0184011 68.421 57 13 2 32 85 86 140 1.75e-18 80.5
Msa1456890 MtrunA17_Chr4g0026931 66.667 57 18 1 31 86 132 188 2.12e-18 81.3
Msa1456890 MtrunA17_Chr3g0140161 61.404 57 22 0 30 86 43 99 2.57e-18 79.0
Msa1456890 MtrunA17_Chr1g0184031 64.407 59 20 1 30 87 84 142 2.79e-18 79.7
Msa1456890 MtrunA17_Chr2g0323171 56.667 60 26 0 28 87 63 122 3.14e-18 79.0
Msa1456890 MtrunA17_Chr4g0023411 56.250 64 27 1 30 93 65 127 5.04e-18 78.6
Msa1456890 MtrunA17_Chr5g0399441 59.649 57 23 0 30 86 28 84 5.41e-18 78.2
Msa1456890 MtrunA17_Chr8g0378811 55.556 63 28 0 29 91 54 116 5.90e-18 79.7
Msa1456890 MtrunA17_Chr1g0189941 46.914 81 33 1 30 110 24 94 7.70e-18 77.4
Msa1456890 MtrunA17_Chr5g0437671 60.000 60 24 0 27 86 82 141 7.96e-18 80.9
Msa1456890 MtrunA17_Chr4g0042761 63.158 57 21 0 29 85 47 103 1.18e-17 79.7
Msa1456890 MtrunA17_Chr1g0184061 64.912 57 19 1 30 85 77 133 1.30e-17 77.8
Msa1456890 MtrunA17_Chr8g0340311 59.649 57 23 0 30 86 47 103 1.54e-17 77.4
Msa1456890 MtrunA17_Chr8g0346741 50.000 72 34 1 17 86 24 95 1.88e-17 76.6
Msa1456890 MtrunA17_Chr3g0131601 69.355 62 19 0 29 90 75 136 2.12e-17 78.2
Msa1456890 MtrunA17_Chr3g0129421 69.231 65 20 0 29 93 169 233 2.55e-17 79.0
Msa1456890 MtrunA17_Chr7g0232261 58.621 58 24 0 30 87 61 118 2.69e-17 77.4
Msa1456890 MtrunA17_Chr4g0055951 59.649 57 23 0 30 86 74 130 2.76e-17 77.8
Msa1456890 MtrunA17_Chr2g0331231 56.140 57 25 0 30 86 41 97 2.91e-17 76.6
Msa1456890 MtrunA17_Chr3g0134161 46.341 82 41 1 8 89 26 104 3.37e-17 75.9
Msa1456890 MtrunA17_Chr5g0401871 51.471 68 33 0 27 94 22 89 3.47e-17 75.9
Msa1456890 MtrunA17_Chr8g0390091 59.649 57 23 0 30 86 37 93 4.50e-17 76.6
Msa1456890 MtrunA17_Chr5g0438851 36.842 190 73 5 21 206 9 155 2.32e-16 73.6
Msa1456890 MtrunA17_Chr1g0153151 53.333 60 28 0 30 89 44 103 2.94e-16 73.6
Msa1456890 MtrunA17_Chr3g0136551 44.304 79 43 1 25 102 60 138 3.36e-16 75.1
Msa1456890 MtrunA17_Chr5g0396191 64.912 57 20 0 30 86 11 67 4.47e-16 73.2
Msa1456890 MtrunA17_Chr1g0170471 64.706 51 17 1 37 86 90 140 5.94e-16 72.4
Msa1456890 MtrunA17_Chr7g0225131 49.398 83 32 3 10 91 15 88 6.14e-16 70.5
Msa1456890 MtrunA17_Chr6g0473941 48.276 87 36 2 8 85 2 88 1.11e-15 72.4
Msa1456890 MtrunA17_Chr5g0396171 49.153 59 30 0 32 90 26 84 1.79e-15 69.3
Msa1456890 MtrunA17_Chr8g0345531 43.421 76 39 1 1 76 91 162 1.81e-15 73.9
Msa1456890 MtrunA17_Chr6g0473741 48.780 82 36 2 7 85 43 121 1.86e-15 72.4
Msa1456890 MtrunA17_Chr6g0473881 50.000 82 35 2 7 85 87 165 2.43e-15 73.2
Msa1456890 MtrunA17_Chr6g0473931 58.730 63 23 1 26 85 26 88 2.78e-15 71.2
Msa1456890 MtrunA17_Chr1g0203861 60.714 56 22 0 30 85 44 99 3.08e-15 71.2
Msa1456890 MtrunA17_Chr3g0083501 58.000 50 21 0 37 86 2 51 3.36e-15 67.8
Msa1456890 MtrunA17_Chr6g0473781 50.000 82 35 2 7 85 34 112 4.56e-15 71.2
Msa1456890 MtrunA17_Chr6g0473961 50.000 76 35 1 13 85 34 109 6.51e-15 70.5
Msa1456890 MtrunA17_Chr1g0186741 62.121 66 24 1 25 89 68 133 8.32e-15 70.1
Msa1456890 MtrunA17_Chr7g0265851 55.172 58 26 0 30 87 24 81 8.72e-15 70.1
Msa1456890 MtrunA17_Chr6g0473861 57.143 56 24 0 30 85 63 118 1.26e-14 70.9
Msa1456890 MtrunA17_Chr1g0167781 49.412 85 40 2 2 85 56 138 1.44e-14 69.7
Msa1456890 MtrunA17_Chr1g0205961 66.667 42 14 0 29 70 114 155 1.60e-14 71.2
Msa1456890 MtrunA17_Chr5g0423811 58.491 53 22 0 25 77 83 135 1.62e-14 70.9
Msa1456890 MtrunA17_Chr6g0473981 50.000 74 34 1 15 85 36 109 1.73e-14 70.1
Msa1456890 MtrunA17_Chr3g0136541 45.833 72 38 1 32 102 42 113 1.79e-14 69.7
Msa1456890 MtrunA17_Chr1g0149331 63.333 60 22 0 29 88 6 65 1.82e-14 68.9
Msa1456890 MtrunA17_Chr6g0461941 65.217 69 23 1 18 86 9 76 1.94e-14 69.3
Msa1456890 MtrunA17_Chr6g0473971 50.000 74 34 1 15 85 36 109 2.03e-14 69.7
Msa1456890 MtrunA17_Chr4g0002771 76.271 59 14 0 30 88 77 135 2.38e-14 68.9
Msa1456890 MtrunA17_Chr1g0183931 67.241 58 18 1 30 86 101 158 4.35e-14 68.9
Msa1456890 MtrunA17_Chr6g0473771 51.786 56 27 0 30 85 43 98 6.90e-14 65.5
Msa1456890 MtrunA17_Chr8g0345551 59.574 47 19 0 30 76 117 163 7.44e-14 69.3
Msa1456890 MtrunA17_Chr7g0243431 51.515 66 25 2 27 85 75 140 9.76e-14 69.3
Msa1456890 MtrunA17_Chr1g0209891 52.830 53 25 0 25 77 49 101 1.28e-13 68.2
Msa1456890 MtrunA17_Chr7g0261201 67.241 58 18 1 30 86 98 155 1.44e-13 67.4
Msa1456890 MtrunA17_Chr1g0155751 59.649 57 23 0 30 86 39 95 1.91e-13 67.4
Msa1456890 MtrunA17_Chr5g0396181 54.098 61 28 0 30 90 21 81 2.11e-13 66.2
Msa1456890 MtrunA17_Chr6g0474001 48.649 74 35 1 15 85 36 109 2.50e-13 67.0
Msa1456890 MtrunA17_Chr5g0422501 45.000 80 33 2 29 99 106 183 3.68e-13 67.4
Msa1456890 MtrunA17_Chr6g0486711 63.158 57 21 0 30 86 49 105 4.08e-13 65.9
Msa1456890 MtrunA17_Chr3g0137831 59.375 64 26 0 24 87 2 65 4.83e-13 65.5
Msa1456890 MtrunA17_Chr1g0198661 40.000 95 53 2 19 111 51 143 1.44e-12 65.5
Msa1456890 MtrunA17_Chr6g0473791 46.154 78 36 2 5 79 32 106 1.50e-12 62.8
Msa1456890 MtrunA17_Chr6g0464581 70.690 58 17 0 35 92 185 242 1.63e-12 65.5
Msa1456890 MtrunA17_Chr5g0396301 40.000 80 43 2 29 106 17 93 2.10e-12 62.8
Msa1456890 MtrunA17_Chr7g0261171 50.000 84 32 3 11 85 59 141 3.51e-12 63.5
Msa1456890 MtrunA17_Chr1g0146191 61.404 57 22 0 30 86 47 103 6.96e-12 62.8
Msa1456890 MtrunA17_Chr1g0186711 44.872 78 42 1 27 103 14 91 8.26e-12 60.1
Msa1456890 MtrunA17_Chr2g0321071 37.168 113 60 5 30 140 47 150 2.01e-11 61.2
Msa1456890 MtrunA17_Chr3g0142081 57.895 57 24 0 30 86 39 95 2.13e-11 61.2
Msa1456890 MtrunA17_Chr1g0186721 45.455 77 41 1 28 103 15 91 2.50e-11 58.9
Msa1456890 MtrunA17_Chr1g0201671 73.077 52 14 0 35 86 144 195 2.85e-11 61.6
Msa1456890 MtrunA17_Chr5g0424051 43.299 97 47 2 14 103 73 168 2.96e-11 61.6
Msa1456890 MtrunA17_Chr4g0057241 50.000 58 28 1 30 87 15 71 3.31e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1456890 AT3G15210.1 56.410 156 35 4 13 143 5 152 1.61e-45 150
Msa1456890 AT5G44210.1 70.968 93 24 1 1 90 1 93 2.80e-38 131
Msa1456890 AT1G53170.1 47.887 213 63 9 11 207 5 185 3.91e-37 128
Msa1456890 AT1G28370.2 47.312 186 54 7 28 207 56 203 5.01e-34 120
Msa1456890 AT1G28370.1 47.312 186 54 7 28 207 18 165 2.03e-33 118
Msa1456890 AT1G28360.1 72.368 76 21 0 20 95 2 77 1.48e-32 116
Msa1456890 AT1G03800.1 53.913 115 44 2 22 135 45 151 4.67e-30 111
Msa1456890 AT1G50640.1 85.246 61 9 0 26 86 24 84 4.83e-30 111
Msa1456890 AT3G20310.1 50.413 121 50 2 4 115 2 121 9.40e-30 110
Msa1456890 AT2G33710.1 75.806 62 15 0 30 91 70 131 4.26e-28 105
Msa1456890 AT2G33710.2 75.806 62 15 0 30 91 70 131 6.27e-28 105
Msa1456890 AT1G24590.1 56.481 108 39 2 28 134 56 156 4.61e-27 105
Msa1456890 AT1G12980.1 75.000 64 16 0 29 92 56 119 7.83e-27 105
Msa1456890 AT5G51190.1 63.750 80 26 2 8 86 52 129 6.05e-26 100
Msa1456890 AT5G61890.1 53.261 92 40 1 23 111 80 171 1.23e-25 100
Msa1456890 AT1G72360.1 59.459 74 30 0 14 87 9 82 1.38e-25 99.0
Msa1456890 AT1G72360.3 55.000 80 36 0 8 87 52 131 2.03e-25 99.8
Msa1456890 AT1G72360.2 55.696 79 35 0 9 87 55 133 3.71e-25 99.4
Msa1456890 AT5G13330.1 74.138 58 15 0 29 86 38 95 4.20e-25 97.8
Msa1456890 AT5G13910.1 72.131 61 17 0 25 85 15 75 8.36e-25 97.1
Msa1456890 AT3G16770.1 75.439 57 14 0 30 86 79 135 1.28e-24 97.4
Msa1456890 AT1G28160.1 73.333 60 16 0 26 85 35 94 1.80e-24 97.1
Msa1456890 AT2G47520.1 72.414 58 16 0 30 87 50 107 3.84e-24 94.4
Msa1456890 AT2G44840.1 64.706 68 23 1 20 86 82 149 2.11e-23 94.0
Msa1456890 AT1G12890.1 58.537 82 34 0 19 100 10 91 2.48e-23 93.6
Msa1456890 AT3G61630.1 61.644 73 25 1 29 98 104 176 2.76e-23 95.1
Msa1456890 AT2G46310.1 45.872 109 49 2 28 136 97 195 2.78e-23 94.7
Msa1456890 AT4G39780.1 54.651 86 37 1 1 86 66 149 4.43e-23 94.0
Msa1456890 AT5G18560.1 59.259 81 29 2 29 106 54 133 4.66e-23 95.1
Msa1456890 AT5G61600.1 65.625 64 21 1 29 91 87 150 6.77e-23 92.8
Msa1456890 AT4G11140.1 66.667 60 20 0 29 88 86 145 9.96e-23 93.2
Msa1456890 AT5G47230.1 69.841 63 18 1 25 86 151 213 1.12e-22 93.6
Msa1456890 AT4G17490.1 56.818 88 36 2 11 96 117 204 1.29e-22 92.8
Msa1456890 AT5G43410.1 67.188 64 20 1 29 91 14 77 2.64e-22 88.2
Msa1456890 AT4G17500.1 65.217 69 23 1 19 86 137 205 3.52e-22 91.7
Msa1456890 AT4G27950.1 63.235 68 23 1 18 85 108 173 5.15e-22 92.0
Msa1456890 AT3G23230.1 65.079 63 21 1 26 87 16 78 6.72e-22 87.4
Msa1456890 AT5G25190.1 65.517 58 20 0 29 86 7 64 1.37e-21 87.8
Msa1456890 AT4G23750.2 58.571 70 29 0 16 85 108 177 1.74e-21 90.9
Msa1456890 AT4G23750.1 58.571 70 29 0 16 85 108 177 1.74e-21 90.9
Msa1456890 AT1G22190.1 60.274 73 28 1 30 102 83 154 2.86e-21 89.0
Msa1456890 AT1G15360.1 56.164 73 27 1 29 101 6 73 2.97e-21 87.4
Msa1456890 AT1G15360.2 56.164 73 27 1 29 101 6 73 2.97e-21 87.4
Msa1456890 AT5G47220.1 67.188 64 20 1 24 86 111 174 3.97e-21 88.2
Msa1456890 AT1G36060.1 57.746 71 30 0 16 86 129 199 6.77e-21 89.0
Msa1456890 AT2G22200.1 56.164 73 32 0 30 102 71 143 1.02e-20 87.4
Msa1456890 AT5G25390.2 57.500 80 29 2 29 106 6 82 1.64e-20 85.1
Msa1456890 AT1G78080.1 67.241 58 19 0 30 87 152 209 1.93e-20 87.8
Msa1456890 AT1G71450.1 63.158 57 21 0 30 86 24 80 2.01e-20 84.7
Msa1456890 AT5G65130.2 63.158 57 21 0 30 86 113 169 2.34e-20 86.7
Msa1456890 AT5G65130.1 63.158 57 21 0 30 86 111 167 2.45e-20 86.7
Msa1456890 AT5G07580.1 66.102 59 19 1 29 86 109 167 3.40e-20 84.7
Msa1456890 AT5G64750.1 67.241 58 19 0 35 92 190 247 4.82e-20 87.4
Msa1456890 AT5G53290.1 57.143 70 29 1 16 85 112 180 4.86e-20 87.0
Msa1456890 AT4G18450.1 71.186 59 15 2 29 85 109 167 8.27e-20 85.9
Msa1456890 AT2G20880.1 56.522 69 28 1 30 98 187 253 1.59e-19 85.5
Msa1456890 AT2G31230.1 63.077 65 23 1 26 89 82 146 1.71e-19 84.0
Msa1456890 AT4G28140.1 40.909 110 57 2 30 133 143 250 1.97e-19 84.3
Msa1456890 AT5G07310.1 66.176 68 23 0 29 96 91 158 2.68e-19 83.6
Msa1456890 AT1G43160.1 79.310 58 12 0 29 86 60 117 2.93e-19 82.0
Msa1456890 AT5G50080.2 70.149 67 20 0 25 91 81 147 4.14e-19 82.4
Msa1456890 AT5G50080.1 70.149 67 20 0 25 91 72 138 4.33e-19 82.4
Msa1456890 AT3G23240.1 62.903 62 22 1 25 85 77 138 5.24e-19 82.0
Msa1456890 AT4G13620.1 64.912 57 20 0 30 86 232 288 6.45e-19 84.3
Msa1456890 AT2G35700.1 57.377 61 26 0 26 86 41 101 1.50e-18 80.1
Msa1456890 AT3G16280.1 63.158 57 21 0 30 86 61 117 3.08e-18 80.5
Msa1456890 AT5G05410.2 41.593 113 52 3 30 135 79 184 3.26e-18 81.3
Msa1456890 AT5G19790.1 61.404 57 22 0 29 85 21 77 3.26e-18 80.5
Msa1456890 AT1G75490.1 56.667 60 26 0 30 89 42 101 3.60e-18 79.3
Msa1456890 AT3G16280.2 63.158 57 21 0 30 86 79 135 4.03e-18 80.5
Msa1456890 AT4G32800.1 53.030 66 31 0 21 86 10 75 4.24e-18 79.7
Msa1456890 AT5G05410.1 41.593 113 52 3 30 135 79 184 4.32e-18 81.3
Msa1456890 AT4G06746.1 49.275 69 35 0 18 86 24 92 5.50e-18 77.8
Msa1456890 AT2G25820.1 61.404 57 22 0 30 86 26 82 5.55e-18 79.3
Msa1456890 AT5G21960.1 41.732 127 51 4 29 132 6 132 5.58e-18 79.3
Msa1456890 AT4G36900.1 44.444 81 45 0 9 89 9 89 6.54e-18 78.6
Msa1456890 AT5G25390.1 61.017 59 20 1 29 87 6 61 6.79e-18 78.2
Msa1456890 AT3G11020.1 36.957 138 69 4 30 149 78 215 7.31e-18 80.9
Msa1456890 AT1G21910.1 56.897 58 25 0 30 87 50 107 9.24e-18 79.0
Msa1456890 AT5G18450.1 55.932 59 26 0 30 88 34 92 1.17e-17 79.7
Msa1456890 AT1G71130.1 54.167 72 28 1 24 90 73 144 1.65e-17 76.6
Msa1456890 AT1G19210.1 48.718 78 39 1 29 105 11 88 1.74e-17 77.0
Msa1456890 AT3G57600.1 50.667 75 34 1 28 102 26 97 1.78e-17 79.0
Msa1456890 AT1G01250.1 55.738 61 27 0 30 90 45 105 2.37e-17 77.0
Msa1456890 AT4G34410.1 75.439 57 14 0 30 86 136 192 2.80e-17 78.2
Msa1456890 AT4G16750.1 51.471 68 33 0 19 86 29 96 2.91e-17 76.6
Msa1456890 AT5G25810.1 59.649 57 23 0 30 86 36 92 3.85e-17 77.0
Msa1456890 AT2G44940.1 59.649 57 23 0 30 86 100 156 4.47e-17 78.2
Msa1456890 AT5G67000.1 56.452 62 27 0 23 84 114 175 5.15e-17 75.9
Msa1456890 AT2G40340.2 50.685 73 32 1 30 102 14 82 8.75e-17 77.0
Msa1456890 AT2G40340.5 50.685 73 32 1 30 102 14 82 8.75e-17 77.0
Msa1456890 AT2G40340.4 50.685 73 32 1 30 102 14 82 8.75e-17 77.0
Msa1456890 AT5G11590.1 59.649 57 23 0 30 86 51 107 9.91e-17 76.3
Msa1456890 AT1G46768.1 53.333 60 28 0 30 89 31 90 1.23e-16 74.3
Msa1456890 AT1G46768.2 53.333 60 28 0 30 89 31 90 1.23e-16 74.3
Msa1456890 AT1G46768.3 53.333 60 28 0 30 89 31 90 1.32e-16 73.9
Msa1456890 AT4G31060.1 56.897 58 25 0 30 87 27 84 1.58e-16 74.7
Msa1456890 AT3G60490.1 57.895 57 24 0 30 86 71 127 1.70e-16 75.9
Msa1456890 AT1G22985.1 58.730 63 23 1 29 88 74 136 1.70e-16 73.9
Msa1456890 AT3G23220.1 61.765 68 25 1 26 92 10 77 2.22e-16 73.2
Msa1456890 AT4G25480.1 60.714 56 22 0 30 85 51 106 2.43e-16 74.7
Msa1456890 AT1G74930.1 45.783 83 37 2 29 111 20 94 2.63e-16 74.3
Msa1456890 AT2G40340.1 50.685 73 32 1 30 102 72 140 2.72e-16 76.3
Msa1456890 AT1G68550.1 73.333 45 12 0 32 76 115 159 2.78e-16 76.3
Msa1456890 AT1G68550.2 73.333 45 12 0 32 76 115 159 2.78e-16 76.3
Msa1456890 AT2G40340.6 50.685 73 32 1 30 102 79 147 2.88e-16 76.3
Msa1456890 AT2G23340.1 53.333 60 28 0 30 89 28 87 2.89e-16 73.6
Msa1456890 AT2G40340.3 50.685 73 32 1 30 102 72 140 3.31e-16 75.9
Msa1456890 AT4G25470.1 60.714 56 22 0 30 85 51 106 4.03e-16 74.3
Msa1456890 AT4G25490.1 60.714 56 22 0 30 85 48 103 4.96e-16 73.9
Msa1456890 AT5G67190.1 53.333 60 28 0 30 89 21 80 5.14e-16 73.2
Msa1456890 AT3G50260.1 42.857 77 44 0 13 89 4 80 5.40e-16 72.4
Msa1456890 AT1G53910.3 51.000 100 49 0 11 110 104 203 1.38e-15 74.7
Msa1456890 AT1G53910.1 51.000 100 49 0 11 110 106 205 1.40e-15 74.7
Msa1456890 AT1G53910.2 51.000 100 49 0 11 110 106 205 1.40e-15 74.7
Msa1456890 AT2G40350.2 50.877 57 28 0 30 86 74 130 2.55e-15 70.9
Msa1456890 AT2G40350.1 50.877 57 28 0 30 86 67 123 3.24e-15 70.5
Msa1456890 AT1G49120.1 65.957 47 16 0 30 76 87 133 5.01e-15 72.8
Msa1456890 AT1G04370.1 65.625 64 21 1 29 91 19 82 5.21e-15 69.3
Msa1456890 AT1G06160.1 70.690 58 16 1 30 86 82 139 1.03e-14 70.9
Msa1456890 AT3G14230.2 53.125 96 41 2 25 116 119 214 1.45e-14 71.6
Msa1456890 AT3G14230.3 53.125 96 41 2 25 116 118 213 1.51e-14 71.6
Msa1456890 AT3G14230.1 53.125 96 41 2 25 116 123 218 1.59e-14 71.6
Msa1456890 AT5G51990.1 57.143 56 24 0 30 85 54 109 1.83e-14 69.7
Msa1456890 AT1G22810.1 33.333 117 73 3 21 133 5 120 2.88e-14 67.8
Msa1456890 AT5G11190.1 62.712 59 22 0 29 87 6 64 1.04e-13 67.0
Msa1456890 AT5G61590.1 66.102 59 19 1 29 86 106 164 1.47e-13 67.0
Msa1456890 AT1G33760.1 43.956 91 48 1 26 116 16 103 2.52e-13 65.9
Msa1456890 AT2G36450.1 54.237 59 26 1 30 87 15 73 3.13e-13 65.9
Msa1456890 AT1G80580.1 70.312 64 19 0 25 88 111 174 6.15e-13 66.2
Msa1456890 AT3G25730.1 42.391 92 44 3 15 99 45 134 1.28e-12 65.9
Msa1456890 AT2G40220.1 62.712 59 22 0 27 85 52 110 3.49e-12 64.7
Msa1456890 AT1G68840.2 53.226 62 27 1 29 90 64 123 3.55e-12 64.7
Msa1456890 AT1G68840.1 53.226 62 27 1 29 90 64 123 3.55e-12 64.7
Msa1456890 AT1G71520.1 37.864 103 56 3 29 125 13 113 3.77e-12 62.0
Msa1456890 AT1G77200.1 59.649 57 23 0 30 86 43 99 4.22e-12 63.5
Msa1456890 AT1G63030.2 41.667 84 46 1 5 85 2 85 8.39e-12 62.0
Msa1456890 AT1G63030.1 41.667 84 46 1 5 85 2 85 8.39e-12 62.0
Msa1456890 AT1G25560.1 50.000 62 29 1 29 90 71 130 9.68e-12 63.5
Msa1456890 AT1G12610.1 42.466 73 39 1 16 85 13 85 3.56e-11 60.5
Msa1456890 AT1G77640.1 52.239 67 32 0 21 87 34 100 4.56e-11 60.8
Msa1456890 AT3G25890.1 57.778 45 19 0 32 76 133 177 6.71e-11 60.8
Msa1456890 AT3G25890.2 57.778 45 19 0 32 76 133 177 6.71e-11 60.8
Msa1456890 AT2G20350.1 54.688 64 29 0 18 81 75 138 7.88e-11 58.9

Find 74 sgRNAs with CRISPR-Local

Find 78 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTGTAACGAATCTCTTTC+TGG 0.104928 tig0038135:-10096 Msa1456890:intergenic
TCTCTTTCTGGGCTTGAGCC+TGG 0.253579 tig0038135:-10084 Msa1456890:intergenic
TGAGCCTGGGCTGAAGGGTT+GGG 0.295733 tig0038135:-10070 Msa1456890:intergenic
TTGAGCCTGGGCTGAAGGGT+TGG 0.316329 tig0038135:-10071 Msa1456890:intergenic
CTCTTTCTGGGCTTGAGCCT+GGG 0.322449 tig0038135:-10083 Msa1456890:intergenic
ATCACCACCACCACCGGGCC+TGG 0.346502 tig0038135:+10046 Msa1456890:CDS
TGGGCTTGAGCCTGGGCTGA+AGG 0.352657 tig0038135:-10076 Msa1456890:intergenic
GGGCCCAGGCCCGGTGGTGG+TGG 0.370379 tig0038135:-10050 Msa1456890:intergenic
GTTGGGCCCAGGCCCGGTGG+TGG 0.380497 tig0038135:-10053 Msa1456890:intergenic
TGGGCTGAAGGGTTGGGCCC+AGG 0.387895 tig0038135:-10064 Msa1456890:intergenic
GTGGTGATTCTGTTATCTCT+TGG 0.391492 tig0038135:-10031 Msa1456890:intergenic
GGGCTTGAGCCTGGGCTGAA+GGG 0.398562 tig0038135:-10075 Msa1456890:intergenic
TGAAGGGTTGGGCCCAGGCC+CGG 0.399514 tig0038135:-10059 Msa1456890:intergenic
CTCACGACGGCCAACGGTTA+AGG 0.413746 tig0038135:-10476 Msa1456890:intergenic
TGGTGTTACCTTGGCGTATC+CGG 0.416830 tig0038135:+10405 Msa1456890:CDS
TTCTCCGCCGTTTCCTCCTC+CGG 0.418675 tig0038135:+10376 Msa1456890:CDS
GCCGTTTCCTCCTCCGGTAC+CGG 0.429364 tig0038135:+10382 Msa1456890:CDS
TGGGCCCAACCCTTCAGCCC+AGG 0.439281 tig0038135:+10066 Msa1456890:CDS
TCTGTAACGAATCTCTTTCT+GGG 0.444652 tig0038135:-10095 Msa1456890:intergenic
TTGATAATCTCCAACGGCGT+TGG 0.449852 tig0038135:-10280 Msa1456890:intergenic
GATCCAGATCAAGCAACTTC+AGG 0.455245 tig0038135:-10640 Msa1456890:intergenic
AACAAAACAGGACGCGCCAC+CGG 0.456829 tig0038135:-10424 Msa1456890:intergenic
TCCTCCGTTGTTGATTATGA+AGG 0.458598 tig0038135:+10568 Msa1456890:CDS
ACCGGTACCGGAGGAGGAAA+CGG 0.460309 tig0038135:-10383 Msa1456890:intergenic
TCAAGAGTGCTGCTTTGACT+AGG 0.465171 tig0038135:-10313 Msa1456890:intergenic
CAAGGTAACACCACCGGTAC+CGG 0.468150 tig0038135:-10395 Msa1456890:intergenic
CAAGAGTGCTGCTTTGACTA+GGG 0.474772 tig0038135:-10312 Msa1456890:intergenic
TCACCACCACCACCGGGCCT+GGG 0.475963 tig0038135:+10047 Msa1456890:CDS
AACACCACCGGTACCGGAGG+AGG 0.490060 tig0038135:-10389 Msa1456890:intergenic
AACAGAATCACCACCACCAC+CGG 0.492408 tig0038135:+10040 Msa1456890:CDS
GAGGCGTAAGAAAACGTCCC+TGG 0.492848 tig0038135:+10116 Msa1456890:CDS
CTCAGCGGCGTAACGACCCC+AGG 0.500971 tig0038135:-10134 Msa1456890:intergenic
GAGGAGGAAACGGCGGAGAA+TGG 0.505790 tig0038135:-10373 Msa1456890:intergenic
TGCTGCTTTGACTAGGGCTA+CGG 0.507967 tig0038135:-10306 Msa1456890:intergenic
TGTGCCACGTCAGAGACTCT+TGG 0.528622 tig0038135:+10591 Msa1456890:CDS
CGGTACCGGTGGTGTTACCT+TGG 0.528833 tig0038135:+10396 Msa1456890:CDS
CAAGCAACTTCAGGTGGTGG+AGG 0.531806 tig0038135:-10631 Msa1456890:intergenic
GCCGCCGTGCAGAGTGACTC+TGG 0.542437 tig0038135:+10538 Msa1456890:CDS
AGGCGTAAGAAAACGTCCCT+GGG 0.542510 tig0038135:+10117 Msa1456890:CDS
AAATCAAGCGGCGGTGGTGA+CGG 0.546489 tig0038135:-10340 Msa1456890:intergenic
AGAGTTAAATCAAGCGGCGG+TGG 0.547923 tig0038135:-10346 Msa1456890:intergenic
GATCAAGCAACTTCAGGTGG+TGG 0.550587 tig0038135:-10634 Msa1456890:intergenic
AAAGCCGCACGTGAGTTTCG+CGG 0.553703 tig0038135:+10235 Msa1456890:CDS
GCTGAAACTGCCTTAACCGT+TGG 0.554593 tig0038135:+10466 Msa1456890:CDS
ATTTGACACGGCTGAAGAAG+CGG 0.565655 tig0038135:+10198 Msa1456890:CDS
AGGGTTGGGCCCAGGCCCGG+TGG 0.572950 tig0038135:-10056 Msa1456890:intergenic
GTGTGGATTTGAACGTCCTA+TGG 0.578815 tig0038135:+10501 Msa1456890:CDS
GCGCGTCGATAATCAGCCAT+AGG 0.582232 tig0038135:-10517 Msa1456890:intergenic
GCCGCTGAGATCCGTGACCC+AGG 0.592268 tig0038135:+10148 Msa1456890:CDS
CTGGCTTGGAACATTTGACA+CGG 0.594309 tig0038135:+10186 Msa1456890:CDS
ACACATCTCACGACGGCCAA+CGG 0.616417 tig0038135:-10482 Msa1456890:intergenic
ACAGAATCACCACCACCACC+GGG 0.631977 tig0038135:+10041 Msa1456890:CDS
ACGCGCCACCGGATACGCCA+AGG 0.632307 tig0038135:-10413 Msa1456890:intergenic
CAGAAAGAGATTCGTTACAG+AGG 0.635781 tig0038135:+10097 Msa1456890:CDS
TGAACCAGAGTCACTCTGCA+CGG 0.636143 tig0038135:-10542 Msa1456890:intergenic
TGTTACCTTGGCGTATCCGG+TGG 0.640017 tig0038135:+10408 Msa1456890:CDS
GTTTCCTCCTCCGGTACCGG+TGG 0.644135 tig0038135:+10385 Msa1456890:CDS
CCAGATCAAGCAACTTCAGG+TGG 0.646277 tig0038135:-10637 Msa1456890:intergenic
GGTAACACCACCGGTACCGG+AGG 0.655943 tig0038135:-10392 Msa1456890:intergenic
TCAGCGGCGTAACGACCCCA+GGG 0.664626 tig0038135:-10133 Msa1456890:intergenic
GTTGGCCGTCGTGAGATGTG+TGG 0.674926 tig0038135:+10484 Msa1456890:CDS
ACCTGGGTCACGGATCTCAG+CGG 0.675666 tig0038135:-10149 Msa1456890:intergenic
GGTGTGAGAGTTAAATCAAG+CGG 0.676391 tig0038135:-10352 Msa1456890:intergenic
CGGTTGTTGATAATCTCCAA+CGG 0.680104 tig0038135:-10286 Msa1456890:intergenic
GTGAGAGTTAAATCAAGCGG+CGG 0.690975 tig0038135:-10349 Msa1456890:intergenic
ATACGCCAAGGTAACACCAC+CGG 0.697408 tig0038135:-10401 Msa1456890:intergenic
CGAGCCGCGAAACTCACGTG+CGG 0.697452 tig0038135:-10239 Msa1456890:intergenic
CACACCTTCATAATCAACAA+CGG 0.707779 tig0038135:-10572 Msa1456890:intergenic
GGCGTAAGAAAACGTCCCTG+GGG 0.723750 tig0038135:+10118 Msa1456890:CDS
ACCTTCATAATCAACAACGG+AGG 0.723761 tig0038135:-10569 Msa1456880:intergenic
GGTACCGGAGGAGGAAACGG+CGG 0.723867 tig0038135:-10380 Msa1456880:intergenic
AGATCCAAGAGTCTCTGACG+TGG 0.733160 tig0038135:-10595 Msa1456880:intergenic
CAAATCCACACATCTCACGA+CGG 0.747498 tig0038135:-10489 Msa1456880:intergenic
ACCAGAGTCACTCTGCACGG+CGG 0.758080 tig0038135:-10539 Msa1456880:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AATGCGTCAAAAAACAAAAC+AGG - tig0038135:10439-10458 Msa1456890:intergenic 30.0%
TCTGTAACGAATCTCTTTCT+GGG - tig0038135:10098-10117 Msa1456890:intergenic 35.0%
!!! AGACACGTGTTTTTTTACCT+GGG - tig0038135:10168-10187 Msa1456890:intergenic 35.0%
CACACCTTCATAATCAACAA+CGG - tig0038135:10575-10594 Msa1456890:intergenic 35.0%
GTGGTGATTCTGTTATCTCT+TGG - tig0038135:10034-10053 None:intergenic 40.0%
CTCTGTAACGAATCTCTTTC+TGG - tig0038135:10099-10118 Msa1456890:intergenic 40.0%
CAGAAAGAGATTCGTTACAG+AGG + tig0038135:10097-10116 Msa1456890:CDS 40.0%
!!! GTGTTTTTTTACCTGGGTCA+CGG - tig0038135:10162-10181 Msa1456890:intergenic 40.0%
!!! CAGACACGTGTTTTTTTACC+TGG - tig0038135:10169-10188 Msa1456890:intergenic 40.0%
CAGGTAAAAAAACACGTGTC+TGG + tig0038135:10167-10186 Msa1456890:CDS 40.0%
AAAAAAACACGTGTCTGGCT+TGG + tig0038135:10172-10191 Msa1456890:CDS 40.0%
!! CGGTTGTTGATAATCTCCAA+CGG - tig0038135:10289-10308 Msa1456890:intergenic 40.0%
GGTGTGAGAGTTAAATCAAG+CGG - tig0038135:10355-10374 Msa1456890:intergenic 40.0%
! TCCTCCGTTGTTGATTATGA+AGG + tig0038135:10568-10587 Msa1456890:CDS 40.0%
ACCTTCATAATCAACAACGG+AGG - tig0038135:10572-10591 Msa1456890:intergenic 40.0%
!! CTGGCTTGGAACATTTGACA+CGG + tig0038135:10186-10205 Msa1456890:CDS 45.0%
ATTTGACACGGCTGAAGAAG+CGG + tig0038135:10198-10217 Msa1456890:CDS 45.0%
! GACAAATTTTCCAACGCCGT+TGG + tig0038135:10270-10289 Msa1456890:CDS 45.0%
! TTGATAATCTCCAACGGCGT+TGG - tig0038135:10283-10302 Msa1456890:intergenic 45.0%
!! CAAGAGTGCTGCTTTGACTA+GGG - tig0038135:10315-10334 Msa1456890:intergenic 45.0%
!! TCAAGAGTGCTGCTTTGACT+AGG - tig0038135:10316-10335 Msa1456890:intergenic 45.0%
GTGAGAGTTAAATCAAGCGG+CGG - tig0038135:10352-10371 Msa1456890:intergenic 45.0%
CAAATCCACACATCTCACGA+CGG - tig0038135:10492-10511 Msa1456890:intergenic 45.0%
GTGTGGATTTGAACGTCCTA+TGG + tig0038135:10501-10520 Msa1456890:CDS 45.0%
AACAGAATCACCACCACCAC+CGG + tig0038135:10040-10059 Msa1456890:CDS 50.0%
AGGCGTAAGAAAACGTCCCT+GGG + tig0038135:10117-10136 Msa1456890:CDS 50.0%
!! TGCTGCTTTGACTAGGGCTA+CGG - tig0038135:10309-10328 Msa1456890:intergenic 50.0%
AGAGTTAAATCAAGCGGCGG+TGG - tig0038135:10349-10368 Msa1456890:intergenic 50.0%
ATACGCCAAGGTAACACCAC+CGG - tig0038135:10404-10423 Msa1456890:intergenic 50.0%
!! TGGTGTTACCTTGGCGTATC+CGG + tig0038135:10405-10424 Msa1456890:CDS 50.0%
GCTGAAACTGCCTTAACCGT+TGG + tig0038135:10466-10485 Msa1456890:CDS 50.0%
TGAACCAGAGTCACTCTGCA+CGG - tig0038135:10545-10564 Msa1456890:intergenic 50.0%
AGATCCAAGAGTCTCTGACG+TGG - tig0038135:10598-10617 Msa1456890:intergenic 50.0%
ACAGAATCACCACCACCACC+GGG + tig0038135:10041-10060 Msa1456890:CDS 55.0%
CTCTTTCTGGGCTTGAGCCT+GGG - tig0038135:10086-10105 Msa1456890:intergenic 55.0%
TCTCTTTCTGGGCTTGAGCC+TGG - tig0038135:10087-10106 Msa1456890:intergenic 55.0%
GAGGCGTAAGAAAACGTCCC+TGG + tig0038135:10116-10135 Msa1456890:CDS 55.0%
GGCGTAAGAAAACGTCCCTG+GGG + tig0038135:10118-10137 Msa1456890:CDS 55.0%
AAAGCCGCACGTGAGTTTCG+CGG + tig0038135:10235-10254 Msa1456890:CDS 55.0%
AAATCAAGCGGCGGTGGTGA+CGG - tig0038135:10343-10362 Msa1456890:intergenic 55.0%
CAAGGTAACACCACCGGTAC+CGG - tig0038135:10398-10417 Msa1456890:intergenic 55.0%
TGTTACCTTGGCGTATCCGG+TGG + tig0038135:10408-10427 Msa1456890:CDS 55.0%
AACAAAACAGGACGCGCCAC+CGG - tig0038135:10427-10446 Msa1456890:intergenic 55.0%
ACACATCTCACGACGGCCAA+CGG - tig0038135:10485-10504 Msa1456890:intergenic 55.0%
! GCGCGTCGATAATCAGCCAT+AGG - tig0038135:10520-10539 Msa1456890:intergenic 55.0%
TGTGCCACGTCAGAGACTCT+TGG + tig0038135:10591-10610 Msa1456890:CDS 55.0%
! CAAGCAACTTCAGGTGGTGG+AGG - tig0038135:10634-10653 Msa1456890:intergenic 55.0%
TGAGCCTGGGCTGAAGGGTT+GGG - tig0038135:10073-10092 Msa1456890:intergenic 60.0%
TTGAGCCTGGGCTGAAGGGT+TGG - tig0038135:10074-10093 Msa1456890:intergenic 60.0%
ACCTGGGTCACGGATCTCAG+CGG - tig0038135:10152-10171 Msa1456890:intergenic 60.0%
GAGGAGGAAACGGCGGAGAA+TGG - tig0038135:10376-10395 Msa1456890:intergenic 60.0%
TTCTCCGCCGTTTCCTCCTC+CGG + tig0038135:10376-10395 Msa1456890:CDS 60.0%
! ACCGGTACCGGAGGAGGAAA+CGG - tig0038135:10386-10405 Msa1456890:intergenic 60.0%
!! CGGTACCGGTGGTGTTACCT+TGG + tig0038135:10396-10415 Msa1456890:CDS 60.0%
CTCACGACGGCCAACGGTTA+AGG - tig0038135:10479-10498 Msa1456890:intergenic 60.0%
GTTGGCCGTCGTGAGATGTG+TGG + tig0038135:10484-10503 Msa1456890:CDS 60.0%
ACCAGAGTCACTCTGCACGG+CGG - tig0038135:10542-10561 Msa1456890:intergenic 60.0%
GGGCTTGAGCCTGGGCTGAA+GGG - tig0038135:10078-10097 Msa1456890:intergenic 65.0%
TGGGCTTGAGCCTGGGCTGA+AGG - tig0038135:10079-10098 Msa1456890:intergenic 65.0%
TCAGCGGCGTAACGACCCCA+GGG - tig0038135:10136-10155 Msa1456890:intergenic 65.0%
CGAGCCGCGAAACTCACGTG+CGG - tig0038135:10242-10261 Msa1456890:intergenic 65.0%
! GGTACCGGAGGAGGAAACGG+CGG - tig0038135:10383-10402 Msa1456890:intergenic 65.0%
GCCGTTTCCTCCTCCGGTAC+CGG + tig0038135:10382-10401 Msa1456890:CDS 65.0%
! GTTTCCTCCTCCGGTACCGG+TGG + tig0038135:10385-10404 Msa1456890:CDS 65.0%
! AACACCACCGGTACCGGAGG+AGG - tig0038135:10392-10411 Msa1456890:intergenic 65.0%
! GGTAACACCACCGGTACCGG+AGG - tig0038135:10395-10414 Msa1456890:intergenic 65.0%
ATCACCACCACCACCGGGCC+TGG + tig0038135:10046-10065 Msa1456890:CDS 70.0%
TCACCACCACCACCGGGCCT+GGG + tig0038135:10047-10066 Msa1456890:CDS 70.0%
TGAAGGGTTGGGCCCAGGCC+CGG - tig0038135:10062-10081 Msa1456890:intergenic 70.0%
TGGGCTGAAGGGTTGGGCCC+AGG - tig0038135:10067-10086 Msa1456890:intergenic 70.0%
TGGGCCCAACCCTTCAGCCC+AGG + tig0038135:10066-10085 Msa1456890:CDS 70.0%
CTCAGCGGCGTAACGACCCC+AGG - tig0038135:10137-10156 Msa1456890:intergenic 70.0%
GCCGCTGAGATCCGTGACCC+AGG + tig0038135:10148-10167 Msa1456890:CDS 70.0%
ACGCGCCACCGGATACGCCA+AGG - tig0038135:10416-10435 Msa1456890:intergenic 70.0%
GCCGCCGTGCAGAGTGACTC+TGG + tig0038135:10538-10557 Msa1456890:CDS 70.0%
! GTTGGGCCCAGGCCCGGTGG+TGG - tig0038135:10056-10075 Msa1456890:intergenic 80.0%
! AGGGTTGGGCCCAGGCCCGG+TGG - tig0038135:10059-10078 Msa1456890:intergenic 80.0%
!! GGGCCCAGGCCCGGTGGTGG+TGG - tig0038135:10053-10072 Msa1456890:intergenic 85.0%
Chromosome Type Strat End Strand Name
tig0038135 gene 10025 10654 10025 ID=Msa1456890;Name=Msa1456890
tig0038135 mRNA 10025 10654 10025 ID=Msa1456890-mRNA-1;Parent=Msa1456890;Name=Msa1456890-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|-1|0|1|-1|1|1|0|209
tig0038135 exon 10025 10654 10025 ID=Msa1456890-mRNA-1:exon:20931;Parent=Msa1456890-mRNA-1
tig0038135 CDS 10025 10654 10025 ID=Msa1456890-mRNA-1:cds;Parent=Msa1456890-mRNA-1
Gene Sequence

>Msa1456890

ATGGCTCCAAGAGATAACAGAATCACCACCACCACCGGGCCTGGGCCCAACCCTTCAGCCCAGGCTCAAGCCCAGAAAGAGATTCGTTACAGAGGCGTAAGAAAACGTCCCTGGGGTCGTTACGCCGCTGAGATCCGTGACCCAGGTAAAAAAACACGTGTCTGGCTTGGAACATTTGACACGGCTGAAGAAGCGGCGCGTGCTTACGACAAAGCCGCACGTGAGTTTCGCGGCTCGAAAGCAAAGACAAATTTTCCAACGCCGTTGGAGATTATCAACAACCGTAGCCCTAGTCAAAGCAGCACTCTTGAATCACCGTCACCACCGCCGCTTGATTTAACTCTCACACCATTCTCCGCCGTTTCCTCCTCCGGTACCGGTGGTGTTACCTTGGCGTATCCGGTGGCGCGTCCTGTTTTGTTTTTTGACGCATTCGCACGTGCTGAAACTGCCTTAACCGTTGGCCGTCGTGAGATGTGTGGATTTGAACGTCCTATGGCTGATTATCGACGCGCCGCCGTGCAGAGTGACTCTGGTTCATCTTCCTCCGTTGTTGATTATGAAGGTGTGCCACGTCAGAGACTCTTGGATCTTGATCTTAATGTTCCTCCACCACCTGAAGTTGCTTGA
Protein sequence

>Msa1456890

MAPRDNRITTTTGPGPNPSAQAQAQKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDKAAREFRGSKAKTNFPTPLEIINNRSPSQSSTLESPSPPPLDLTLTPFSAVSSSGTGGVTLAYPVARPVLFFDAFARAETALTVGRREMCGFERPMADYRRAAVQSDSGSSSSVVDYEGVPRQRLLDLDLNVPPPPEVA*