Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1461190 | XP_003591967.1 | 95.238 | 252 | 11 | 1 | 1 | 251 | 1 | 252 | 2.73e-149 | 426 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1461190 | G7I9M1 | 95.238 | 252 | 11 | 1 | 1 | 251 | 1 | 252 | 1.30e-149 | 426 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1438470 | Msa1461190 | 0.920086 | 1.996361e-87 | -8.615850e-47 |
| Msa1443990 | Msa1461190 | 0.911024 | 9.708376e-83 | -8.615850e-47 |
| Msa0826240 | Msa1461190 | 0.800119 | 1.673321e-48 | -8.615850e-47 |
| Msa0185040 | Msa1461190 | 0.803555 | 3.297048e-49 | -8.615850e-47 |
| Msa0383900 | Msa1461190 | 0.801369 | 9.302865e-49 | -8.615850e-47 |
| Msa0242720 | Msa1461190 | 0.804023 | 2.636018e-49 | -8.615850e-47 |
| Msa0265650 | Msa1461190 | 0.810600 | 1.063560e-50 | -8.615850e-47 |
| Msa1157110 | Msa1461190 | 0.815440 | 9.233589e-52 | -8.615850e-47 |
| Msa1174280 | Msa1461190 | 0.809912 | 1.496361e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1461190 | MtrunA17_Chr1g0200151 | 95.238 | 252 | 11 | 1 | 1 | 251 | 1 | 252 | 2.51e-153 | 426 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 48 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGTTTCCGACACCGGAAAA+TGG | 0.187842 | tig0041342:-6006 | Msa1461190:CDS |
| TGAGGTGAAATTGTGGAATT+TGG | 0.256995 | tig0041342:+6492 | None:intergenic |
| TTCCACAATTTCACCTCAAC+GGG | 0.312827 | tig0041342:-6487 | Msa1461190:CDS |
| AGAGGAATAGGAATAGTAAA+AGG | 0.330599 | tig0041342:-5963 | Msa1461190:CDS |
| ATGGTGATCCTTGCTGTAAT+TGG | 0.353696 | tig0041342:+6455 | None:intergenic |
| TTGTTAAGAGTAAGAGGAAT+AGG | 0.359418 | tig0041342:-5975 | Msa1461190:CDS |
| GGAACCATTACTAGATTTCA+TGG | 0.377121 | tig0041342:+6269 | None:intergenic |
| TGTTTCCGACACCGGAAAAT+GGG | 0.386344 | tig0041342:-6005 | Msa1461190:CDS |
| AAGAGGTTGTTAAGAGTAAG+AGG | 0.411804 | tig0041342:-5981 | Msa1461190:CDS |
| CATAGCTAGCTTGAAGAGTA+AGG | 0.421195 | tig0041342:-6247 | Msa1461190:CDS |
| TTGAAGAGTAAGGGAAATGA+AGG | 0.446303 | tig0041342:-6237 | Msa1461190:CDS |
| GGAAATGAAGGAGAAGTAAA+GGG | 0.448337 | tig0041342:-6225 | Msa1461190:CDS |
| TTGGAATGTCGTCGAGTTCG+AGG | 0.453818 | tig0041342:-6101 | Msa1461190:CDS |
| TTCTACTCAGATCAAGAAGC+AGG | 0.454222 | tig0041342:-6591 | Msa1461190:CDS |
| GTCACTAAGTTGCATCTCCT+TGG | 0.456940 | tig0041342:+6071 | None:intergenic |
| GGGAAATGAAGGAGAAGTAA+AGG | 0.459006 | tig0041342:-6226 | Msa1461190:CDS |
| TGCTGGTGACTACACATCAA+TGG | 0.471580 | tig0041342:-6181 | Msa1461190:CDS |
| GCTGGTGACTACACATCAAT+GGG | 0.479840 | tig0041342:-6180 | Msa1461190:CDS |
| AACATGTTGATGATCTTTGA+AGG | 0.488709 | tig0041342:+6338 | None:intergenic |
| CTTACTCTTCAAGCTAGCTA+TGG | 0.509662 | tig0041342:+6248 | None:intergenic |
| ATAGGAATAGTAAAAGGATG+TGG | 0.514498 | tig0041342:-5957 | Msa1461190:CDS |
| ACTTGCTAATGATGTAGTAA+AGG | 0.515795 | tig0041342:-5887 | Msa1461190:CDS |
| GAAGTCCAACAAAATCTAGA+TGG | 0.518576 | tig0041342:-6137 | Msa1461190:CDS |
| ATGGCCTTTGAATTTGAAGT+GGG | 0.521547 | tig0041342:+6288 | None:intergenic |
| CATGGCCTTTGAATTTGAAG+TGG | 0.528240 | tig0041342:+6287 | None:intergenic |
| GGAATTTGGAAGGTCACAAA+GGG | 0.536647 | tig0041342:+6506 | None:intergenic |
| GAAATAGACAGAGCAGAAGC+CGG | 0.555893 | tig0041342:-6044 | Msa1461190:CDS |
| TAAACCCACTTCAAATTCAA+AGG | 0.577655 | tig0041342:-6292 | Msa1461190:CDS |
| ATTCCACAATTTCACCTCAA+CGG | 0.579273 | tig0041342:-6488 | Msa1461190:CDS |
| ATAGCTAGCTTGAAGAGTAA+GGG | 0.580739 | tig0041342:-6246 | Msa1461190:CDS |
| GACACCGGAAAATGGGAAAG+AGG | 0.585817 | tig0041342:-5998 | Msa1461190:CDS |
| ACATCGTCATCGGCTCCCTC+CGG | 0.586108 | tig0041342:+6025 | None:intergenic |
| CATGACAACATAATCTTCTG+TGG | 0.586506 | tig0041342:-6372 | Msa1461190:CDS |
| ACATGTTGATGATCTTTGAA+GGG | 0.588773 | tig0041342:+6339 | None:intergenic |
| TGGAATTTGGAAGGTCACAA+AGG | 0.590193 | tig0041342:+6505 | None:intergenic |
| GAGTTCGAGGATGTCTTCCA+AGG | 0.590470 | tig0041342:-6088 | Msa1461190:CDS |
| GTGAAATTGTGGAATTTGGA+AGG | 0.591726 | tig0041342:+6496 | None:intergenic |
| ACCCCGTTGAGGTGAAATTG+TGG | 0.594385 | tig0041342:+6485 | None:intergenic |
| ATAGACAGAGCAGAAGCCGG+AGG | 0.610980 | tig0041342:-6041 | Msa1461190:CDS |
| CTACACATCAATGGGAGGGA+AGG | 0.612457 | tig0041342:-6172 | Msa1461190:CDS |
| AAGGCCATGAAATCTAGTAA+TGG | 0.615347 | tig0041342:-6273 | Msa1461190:CDS |
| GGTGTCGGAAACATCGTCAT+CGG | 0.617855 | tig0041342:+6015 | None:intergenic |
| TAGACAGAGCAGAAGCCGGA+GGG | 0.622934 | tig0041342:-6040 | Msa1461190:CDS |
| GATGACGATGTTTCCGACAC+CGG | 0.635603 | tig0041342:-6013 | Msa1461190:CDS |
| TCTACTCAGATCAAGAAGCA+GGG | 0.638478 | tig0041342:-6590 | Msa1461190:CDS |
| GTGACTACACATCAATGGGA+GGG | 0.664793 | tig0041342:-6176 | Msa1461190:CDS |
| GGTGACTACACATCAATGGG+AGG | 0.668735 | tig0041342:-6177 | Msa1461190:CDS |
| TCCACAATTTCACCTCAACG+GGG | 0.743576 | tig0041342:-6486 | Msa1461190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACCATCTAGATTTTGT+TGG | + | tig0041342:6350-6369 | None:intergenic | 25.0% |
| !!! | AGATGGTTTTTGTTTATGTT+TGG | - | tig0041342:6359-6378 | Msa1461190:CDS | 25.0% |
| !!! | GATTTTGAAGTCAATTTCAT+TGG | - | tig0041342:6547-6566 | Msa1461190:CDS | 25.0% |
| !!! | AAGTCAATTTCATTGGTTTT+AGG | - | tig0041342:6554-6573 | Msa1461190:CDS | 25.0% |
| !! | AAAAACCATCTAGATTTTGT+TGG | + | tig0041342:6350-6369 | None:intergenic | 25.0% |
| !!! | AGATGGTTTTTGTTTATGTT+TGG | - | tig0041342:6359-6378 | Msa1461190:CDS | 25.0% |
| !!! | GATTTTGAAGTCAATTTCAT+TGG | - | tig0041342:6547-6566 | Msa1461190:CDS | 25.0% |
| !!! | AAGTCAATTTCATTGGTTTT+AGG | - | tig0041342:6554-6573 | Msa1461190:CDS | 25.0% |
| ! | TGATTTTTCCAATTACAGCA+AGG | - | tig0041342:6016-6035 | Msa1461190:CDS | 30.0% |
| AGTTATCATCATCATCATCA+TGG | + | tig0041342:6046-6065 | None:intergenic | 30.0% | |
| !! | ACATGTTGATGATCTTTGAA+GGG | + | tig0041342:6143-6162 | None:intergenic | 30.0% |
| !! | AACATGTTGATGATCTTTGA+AGG | + | tig0041342:6144-6163 | None:intergenic | 30.0% |
| !!! | GCACAATTTTTTTGGTTATG+AGG | + | tig0041342:6167-6186 | None:intergenic | 30.0% |
| !!! | TGGGTTTAGCACAATTTTTT+TGG | + | tig0041342:6175-6194 | None:intergenic | 30.0% |
| TAAACCCACTTCAAATTCAA+AGG | - | tig0041342:6187-6206 | Msa1461190:CDS | 30.0% | |
| ! | TTGAATGTAAAGAGTTTTGC+TGG | - | tig0041342:6281-6300 | Msa1461190:CDS | 30.0% |
| TTGTTAAGAGTAAGAGGAAT+AGG | - | tig0041342:6504-6523 | Msa1461190:CDS | 30.0% | |
| AGAGGAATAGGAATAGTAAA+AGG | - | tig0041342:6516-6535 | Msa1461190:CDS | 30.0% | |
| ATAGGAATAGTAAAAGGATG+TGG | - | tig0041342:6522-6541 | Msa1461190:CDS | 30.0% | |
| ! | ACTTGCTAATGATGTAGTAA+AGG | - | tig0041342:6592-6611 | Msa1461190:CDS | 30.0% |
| ! | TGATTTTTCCAATTACAGCA+AGG | - | tig0041342:6016-6035 | Msa1461190:CDS | 30.0% |
| AGTTATCATCATCATCATCA+TGG | + | tig0041342:6046-6065 | None:intergenic | 30.0% | |
| !! | ACATGTTGATGATCTTTGAA+GGG | + | tig0041342:6143-6162 | None:intergenic | 30.0% |
| !! | AACATGTTGATGATCTTTGA+AGG | + | tig0041342:6144-6163 | None:intergenic | 30.0% |
| !!! | GCACAATTTTTTTGGTTATG+AGG | + | tig0041342:6167-6186 | None:intergenic | 30.0% |
| !!! | TGGGTTTAGCACAATTTTTT+TGG | + | tig0041342:6175-6194 | None:intergenic | 30.0% |
| TAAACCCACTTCAAATTCAA+AGG | - | tig0041342:6187-6206 | Msa1461190:CDS | 30.0% | |
| ! | TTGAATGTAAAGAGTTTTGC+TGG | - | tig0041342:6281-6300 | Msa1461190:CDS | 30.0% |
| TTGTTAAGAGTAAGAGGAAT+AGG | - | tig0041342:6504-6523 | Msa1461190:CDS | 30.0% | |
| AGAGGAATAGGAATAGTAAA+AGG | - | tig0041342:6516-6535 | Msa1461190:CDS | 30.0% | |
| ATAGGAATAGTAAAAGGATG+TGG | - | tig0041342:6522-6541 | Msa1461190:CDS | 30.0% | |
| ! | ACTTGCTAATGATGTAGTAA+AGG | - | tig0041342:6592-6611 | Msa1461190:CDS | 30.0% |
| GTGAAATTGTGGAATTTGGA+AGG | + | tig0041342:5986-6005 | None:intergenic | 35.0% | |
| TGAGGTGAAATTGTGGAATT+TGG | + | tig0041342:5990-6009 | None:intergenic | 35.0% | |
| ATTCCACAATTTCACCTCAA+CGG | - | tig0041342:5991-6010 | Msa1461190:CDS | 35.0% | |
| CATGACAACATAATCTTCTG+TGG | - | tig0041342:6107-6126 | Msa1461190:CDS | 35.0% | |
| ! | ATGGCCTTTGAATTTGAAGT+GGG | + | tig0041342:6194-6213 | None:intergenic | 35.0% |
| AAGGCCATGAAATCTAGTAA+TGG | - | tig0041342:6206-6225 | Msa1461190:CDS | 35.0% | |
| GGAACCATTACTAGATTTCA+TGG | + | tig0041342:6213-6232 | None:intergenic | 35.0% | |
| ! | ATAGCTAGCTTGAAGAGTAA+GGG | - | tig0041342:6233-6252 | Msa1461190:CDS | 35.0% |
| TTGAAGAGTAAGGGAAATGA+AGG | - | tig0041342:6242-6261 | Msa1461190:CDS | 35.0% | |
| GGAAATGAAGGAGAAGTAAA+GGG | - | tig0041342:6254-6273 | Msa1461190:CDS | 35.0% | |
| GAAGTCCAACAAAATCTAGA+TGG | - | tig0041342:6342-6361 | Msa1461190:CDS | 35.0% | |
| AAGAGGTTGTTAAGAGTAAG+AGG | - | tig0041342:6498-6517 | Msa1461190:CDS | 35.0% | |
| GTGAAATTGTGGAATTTGGA+AGG | + | tig0041342:5986-6005 | None:intergenic | 35.0% | |
| TGAGGTGAAATTGTGGAATT+TGG | + | tig0041342:5990-6009 | None:intergenic | 35.0% | |
| ATTCCACAATTTCACCTCAA+CGG | - | tig0041342:5991-6010 | Msa1461190:CDS | 35.0% | |
| CATGACAACATAATCTTCTG+TGG | - | tig0041342:6107-6126 | Msa1461190:CDS | 35.0% | |
| ! | ATGGCCTTTGAATTTGAAGT+GGG | + | tig0041342:6194-6213 | None:intergenic | 35.0% |
| AAGGCCATGAAATCTAGTAA+TGG | - | tig0041342:6206-6225 | Msa1461190:CDS | 35.0% | |
| GGAACCATTACTAGATTTCA+TGG | + | tig0041342:6213-6232 | None:intergenic | 35.0% | |
| ! | ATAGCTAGCTTGAAGAGTAA+GGG | - | tig0041342:6233-6252 | Msa1461190:CDS | 35.0% |
| TTGAAGAGTAAGGGAAATGA+AGG | - | tig0041342:6242-6261 | Msa1461190:CDS | 35.0% | |
| GGAAATGAAGGAGAAGTAAA+GGG | - | tig0041342:6254-6273 | Msa1461190:CDS | 35.0% | |
| GAAGTCCAACAAAATCTAGA+TGG | - | tig0041342:6342-6361 | Msa1461190:CDS | 35.0% | |
| AAGAGGTTGTTAAGAGTAAG+AGG | - | tig0041342:6498-6517 | Msa1461190:CDS | 35.0% | |
| TTCTACTCAGATCAAGAAGC+AGG | - | tig0041342:5888-5907 | Msa1461190:CDS | 40.0% | |
| TCTACTCAGATCAAGAAGCA+GGG | - | tig0041342:5889-5908 | Msa1461190:CDS | 40.0% | |
| GGAATTTGGAAGGTCACAAA+GGG | + | tig0041342:5976-5995 | None:intergenic | 40.0% | |
| TGGAATTTGGAAGGTCACAA+AGG | + | tig0041342:5977-5996 | None:intergenic | 40.0% | |
| TTCCACAATTTCACCTCAAC+GGG | - | tig0041342:5992-6011 | Msa1461190:CDS | 40.0% | |
| ! | ATGGTGATCCTTGCTGTAAT+TGG | + | tig0041342:6027-6046 | None:intergenic | 40.0% |
| CATGGCCTTTGAATTTGAAG+TGG | + | tig0041342:6195-6214 | None:intergenic | 40.0% | |
| CTTACTCTTCAAGCTAGCTA+TGG | + | tig0041342:6234-6253 | None:intergenic | 40.0% | |
| ! | CATAGCTAGCTTGAAGAGTA+AGG | - | tig0041342:6232-6251 | Msa1461190:CDS | 40.0% |
| GGGAAATGAAGGAGAAGTAA+AGG | - | tig0041342:6253-6272 | Msa1461190:CDS | 40.0% | |
| ! | ACAACCTCTTTCCCATTTTC+CGG | + | tig0041342:6488-6507 | None:intergenic | 40.0% |
| TTCTACTCAGATCAAGAAGC+AGG | - | tig0041342:5888-5907 | Msa1461190:CDS | 40.0% | |
| TCTACTCAGATCAAGAAGCA+GGG | - | tig0041342:5889-5908 | Msa1461190:CDS | 40.0% | |
| GGAATTTGGAAGGTCACAAA+GGG | + | tig0041342:5976-5995 | None:intergenic | 40.0% | |
| TGGAATTTGGAAGGTCACAA+AGG | + | tig0041342:5977-5996 | None:intergenic | 40.0% | |
| TTCCACAATTTCACCTCAAC+GGG | - | tig0041342:5992-6011 | Msa1461190:CDS | 40.0% | |
| ! | ATGGTGATCCTTGCTGTAAT+TGG | + | tig0041342:6027-6046 | None:intergenic | 40.0% |
| CATGGCCTTTGAATTTGAAG+TGG | + | tig0041342:6195-6214 | None:intergenic | 40.0% | |
| CTTACTCTTCAAGCTAGCTA+TGG | + | tig0041342:6234-6253 | None:intergenic | 40.0% | |
| ! | CATAGCTAGCTTGAAGAGTA+AGG | - | tig0041342:6232-6251 | Msa1461190:CDS | 40.0% |
| GGGAAATGAAGGAGAAGTAA+AGG | - | tig0041342:6253-6272 | Msa1461190:CDS | 40.0% | |
| ! | ACAACCTCTTTCCCATTTTC+CGG | + | tig0041342:6488-6507 | None:intergenic | 40.0% |
| TCCACAATTTCACCTCAACG+GGG | - | tig0041342:5993-6012 | Msa1461190:CDS | 45.0% | |
| TTGGAAAAATCACCCCGTTG+AGG | + | tig0041342:6008-6027 | None:intergenic | 45.0% | |
| TGCTGGTGACTACACATCAA+TGG | - | tig0041342:6298-6317 | Msa1461190:CDS | 45.0% | |
| GCTGGTGACTACACATCAAT+GGG | - | tig0041342:6299-6318 | Msa1461190:CDS | 45.0% | |
| GTGACTACACATCAATGGGA+GGG | - | tig0041342:6303-6322 | Msa1461190:CDS | 45.0% | |
| GTCACTAAGTTGCATCTCCT+TGG | + | tig0041342:6411-6430 | None:intergenic | 45.0% | |
| GAAATAGACAGAGCAGAAGC+CGG | - | tig0041342:6435-6454 | Msa1461190:CDS | 45.0% | |
| ATGTTTCCGACACCGGAAAA+TGG | - | tig0041342:6473-6492 | Msa1461190:CDS | 45.0% | |
| TGTTTCCGACACCGGAAAAT+GGG | - | tig0041342:6474-6493 | Msa1461190:CDS | 45.0% | |
| ! | TCTTTCCCATTTTCCGGTGT+CGG | + | tig0041342:6482-6501 | None:intergenic | 45.0% |
| TCCACAATTTCACCTCAACG+GGG | - | tig0041342:5993-6012 | Msa1461190:CDS | 45.0% | |
| TTGGAAAAATCACCCCGTTG+AGG | + | tig0041342:6008-6027 | None:intergenic | 45.0% | |
| TGCTGGTGACTACACATCAA+TGG | - | tig0041342:6298-6317 | Msa1461190:CDS | 45.0% | |
| GCTGGTGACTACACATCAAT+GGG | - | tig0041342:6299-6318 | Msa1461190:CDS | 45.0% | |
| GTGACTACACATCAATGGGA+GGG | - | tig0041342:6303-6322 | Msa1461190:CDS | 45.0% | |
| GTCACTAAGTTGCATCTCCT+TGG | + | tig0041342:6411-6430 | None:intergenic | 45.0% | |
| GAAATAGACAGAGCAGAAGC+CGG | - | tig0041342:6435-6454 | Msa1461190:CDS | 45.0% | |
| ATGTTTCCGACACCGGAAAA+TGG | - | tig0041342:6473-6492 | Msa1461190:CDS | 45.0% | |
| TGTTTCCGACACCGGAAAAT+GGG | - | tig0041342:6474-6493 | Msa1461190:CDS | 45.0% | |
| ! | TCTTTCCCATTTTCCGGTGT+CGG | + | tig0041342:6482-6501 | None:intergenic | 45.0% |
| ACCCCGTTGAGGTGAAATTG+TGG | + | tig0041342:5997-6016 | None:intergenic | 50.0% | |
| GGTGACTACACATCAATGGG+AGG | - | tig0041342:6302-6321 | Msa1461190:CDS | 50.0% | |
| CTACACATCAATGGGAGGGA+AGG | - | tig0041342:6307-6326 | Msa1461190:CDS | 50.0% | |
| TTGGAATGTCGTCGAGTTCG+AGG | - | tig0041342:6378-6397 | Msa1461190:CDS | 50.0% | |
| GAGTTCGAGGATGTCTTCCA+AGG | - | tig0041342:6391-6410 | Msa1461190:CDS | 50.0% | |
| ! | GGTGTCGGAAACATCGTCAT+CGG | + | tig0041342:6467-6486 | None:intergenic | 50.0% |
| GATGACGATGTTTCCGACAC+CGG | - | tig0041342:6466-6485 | Msa1461190:CDS | 50.0% | |
| GACACCGGAAAATGGGAAAG+AGG | - | tig0041342:6481-6500 | Msa1461190:CDS | 50.0% | |
| ACCCCGTTGAGGTGAAATTG+TGG | + | tig0041342:5997-6016 | None:intergenic | 50.0% | |
| GGTGACTACACATCAATGGG+AGG | - | tig0041342:6302-6321 | Msa1461190:CDS | 50.0% | |
| CTACACATCAATGGGAGGGA+AGG | - | tig0041342:6307-6326 | Msa1461190:CDS | 50.0% | |
| TTGGAATGTCGTCGAGTTCG+AGG | - | tig0041342:6378-6397 | Msa1461190:CDS | 50.0% | |
| GAGTTCGAGGATGTCTTCCA+AGG | - | tig0041342:6391-6410 | Msa1461190:CDS | 50.0% | |
| ! | GGTGTCGGAAACATCGTCAT+CGG | + | tig0041342:6467-6486 | None:intergenic | 50.0% |
| GATGACGATGTTTCCGACAC+CGG | - | tig0041342:6466-6485 | Msa1461190:CDS | 50.0% | |
| GACACCGGAAAATGGGAAAG+AGG | - | tig0041342:6481-6500 | Msa1461190:CDS | 50.0% | |
| ATAGACAGAGCAGAAGCCGG+AGG | - | tig0041342:6438-6457 | Msa1461190:CDS | 55.0% | |
| TAGACAGAGCAGAAGCCGGA+GGG | - | tig0041342:6439-6458 | Msa1461190:CDS | 55.0% | |
| ATAGACAGAGCAGAAGCCGG+AGG | - | tig0041342:6438-6457 | Msa1461190:CDS | 55.0% | |
| TAGACAGAGCAGAAGCCGGA+GGG | - | tig0041342:6439-6458 | Msa1461190:CDS | 55.0% | |
| !! | ACATCGTCATCGGCTCCCTC+CGG | + | tig0041342:6457-6476 | None:intergenic | 60.0% |
| !! | ACATCGTCATCGGCTCCCTC+CGG | + | tig0041342:6457-6476 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0041342 | gene | 5873 | 6628 | 5873 | ID=Msa1461190;Name=Msa1461190 |
| tig0041342 | mRNA | 5873 | 6628 | 5873 | ID=Msa1461190-mRNA-1;Parent=Msa1461190;Name=Msa1461190-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|251 |
| tig0041342 | exon | 5873 | 6628 | 5873 | ID=Msa1461190-mRNA-1:exon:23070;Parent=Msa1461190-mRNA-1 |
| tig0041342 | CDS | 5873 | 6628 | 5873 | ID=Msa1461190-mRNA-1:cds;Parent=Msa1461190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
