Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465150 | XP_003610319.1 | 97.947 | 341 | 7 | 0 | 1 | 341 | 1 | 341 | 0.0 | 663 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465150 | sp|P30184|AMPL1_ARATH | 71.233 | 292 | 82 | 1 | 50 | 341 | 4 | 293 | 6.99e-145 | 422 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465150 | G7JGP9 | 97.947 | 341 | 7 | 0 | 1 | 341 | 1 | 341 | 0.0 | 663 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035320 | Msa1465150 | 0.801634 | 8.207279e-49 | -8.615850e-47 |
| Msa1370500 | Msa1465150 | 0.841099 | 5.833458e-58 | -8.615850e-47 |
| Msa1384010 | Msa1465150 | 0.839257 | 1.765809e-57 | -8.615850e-47 |
| Msa1401510 | Msa1465150 | 0.824404 | 8.221595e-54 | -8.615850e-47 |
| Msa1267040 | Msa1465150 | 0.810728 | 9.979999e-51 | -8.615850e-47 |
| Msa1267170 | Msa1465150 | 0.801222 | 9.967157e-49 | -8.615850e-47 |
| Msa1336030 | Msa1465150 | 0.815793 | 7.705479e-52 | -8.615850e-47 |
| Msa0268110 | Msa1465150 | 0.836189 | 1.082796e-56 | -8.615850e-47 |
| Msa0286620 | Msa1465150 | 0.800511 | 1.392790e-48 | -8.615850e-47 |
| Msa0586450 | Msa1465150 | 0.809196 | 2.132309e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465150 | MtrunA17_Chr4g0073971 | 97.947 | 341 | 7 | 0 | 1 | 341 | 1 | 341 | 0.0 | 663 |
| Msa1465150 | MtrunA17_Chr2g0305841 | 66.567 | 335 | 96 | 7 | 20 | 341 | 26 | 357 | 5.16e-138 | 404 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1465150 | AT2G24200.2 | 71.233 | 292 | 82 | 1 | 50 | 341 | 4 | 293 | 7.11e-146 | 422 |
| Msa1465150 | AT2G24200.1 | 71.233 | 292 | 82 | 1 | 50 | 341 | 4 | 293 | 7.11e-146 | 422 |
| Msa1465150 | AT4G30920.1 | 68.652 | 319 | 98 | 2 | 24 | 341 | 39 | 356 | 5.50e-143 | 417 |
| Msa1465150 | AT4G30910.1 | 66.978 | 321 | 104 | 2 | 22 | 341 | 36 | 355 | 4.84e-137 | 402 |
| Msa1465150 | AT4G30910.2 | 66.978 | 321 | 104 | 2 | 22 | 341 | 36 | 355 | 7.47e-137 | 402 |
| Msa1465150 | AT2G24200.3 | 61.301 | 292 | 75 | 2 | 50 | 341 | 4 | 257 | 8.01e-116 | 344 |
| Msa1465150 | AT5G13940.1 | 72.549 | 51 | 14 | 0 | 278 | 328 | 66 | 116 | 3.11e-17 | 83.6 |
Find 84 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTAGATCCATTGACATTAT+TGG | 0.185386 | tig0044967:-760 | Msa1465150:CDS |
| TTCAACTACTGCACTGTATA+AGG | 0.215864 | tig0044967:-1268 | Msa1465150:CDS |
| TCAACCGTTGTTAGGATTAA+AGG | 0.216149 | tig0044967:-1336 | Msa1465150:CDS |
| TCAGTGCAAGGAATTGAAAA+TGG | 0.287397 | tig0044967:-438 | Msa1465150:CDS |
| CAGAAGCTATGGCCGCCATT+AGG | 0.320957 | tig0044967:+1888 | Msa1465150:intergenic |
| TCCATTGACATTATTGGTCT+TGG | 0.330495 | tig0044967:-754 | Msa1465150:CDS |
| GACATTATTGGTCTTGGAAC+GGG | 0.342266 | tig0044967:-748 | Msa1465150:CDS |
| TCTTGGAACGGGACCTGAAT+TGG | 0.350120 | tig0044967:-737 | Msa1465150:CDS |
| TTGGTCAATCAACCGTTGTT+AGG | 0.351523 | tig0044967:-1344 | Msa1465150:CDS |
| TATGCTGGAGATGTTTCTTC+TGG | 0.355442 | tig0044967:-700 | Msa1465150:CDS |
| AATTGTGCTAGGGGCTGTGC+TGG | 0.374616 | tig0044967:-830 | Msa1465150:intron |
| AGAAGCTATGGCCGCCATTA+GGG | 0.385297 | tig0044967:+1889 | Msa1465150:intergenic |
| TTGAAAATGGGGTCCTATCT+AGG | 0.385305 | tig0044967:-425 | Msa1465150:CDS |
| GTTGGCAGAAGAGGCATCTA+AGG | 0.398414 | tig0044967:-510 | Msa1465150:CDS |
| AGGATTGGTTTGATCGGTCT+TGG | 0.403728 | tig0044967:-1300 | Msa1465150:CDS |
| TGTAAAGGTCAAGCTGGCTT+TGG | 0.404040 | tig0044967:-336 | Msa1465150:CDS |
| ATCAAAACCATGGATAATAC+AGG | 0.415155 | tig0044967:+219 | Msa1465150:intergenic |
| CAGTGCAAGGAATTGAAAAT+GGG | 0.425078 | tig0044967:-437 | Msa1465150:CDS |
| ATTGTTCTTGCCTCTTCTGA+AGG | 0.447563 | tig0044967:-1189 | Msa1465150:CDS |
| CGCAGCTGCTAAGTCTGCTC+AGG | 0.448202 | tig0044967:-1226 | Msa1465150:CDS |
| TCAACTACTGCACTGTATAA+GGG | 0.451795 | tig0044967:-1267 | Msa1465150:CDS |
| GAACAAGATTGATTTGAAGT+TGG | 0.456119 | tig0044967:-1415 | Msa1465150:CDS |
| AAGCTGGCTTTGGTTGGAAA+AGG | 0.463001 | tig0044967:-326 | Msa1465150:CDS |
| CTTAGGGGATTCGATGTTGG+TGG | 0.464392 | tig0044967:+1718 | Msa1465150:intergenic |
| ACTGCTTATGCAATTGCATC+TGG | 0.464876 | tig0044967:-1141 | Msa1465150:intron |
| AGCGGTGAAAACATCACTAT+AGG | 0.468504 | tig0044967:+478 | Msa1465150:intergenic |
| TCTTCTGAAGAGGATTTCTC+TGG | 0.470409 | tig0044967:-1372 | Msa1465150:CDS |
| TCCAAGACCAATAATGTCAA+TGG | 0.470434 | tig0044967:+753 | Msa1465150:intergenic |
| TAGACTCTCCCACACCCTAA+TGG | 0.471832 | tig0044967:-1903 | Msa1465150:exon |
| TTGGAGGTTTGTAAGTAAGA+TGG | 0.473742 | tig0044967:+366 | Msa1465150:intergenic |
| GAGGATTTCTCTGGTAAAGT+TGG | 0.474128 | tig0044967:-1363 | Msa1465150:CDS |
| GGACTTGGATCAAAGAGGAT+TGG | 0.480400 | tig0044967:-1315 | Msa1465150:CDS |
| TTAGGGGATTCGATGTTGGT+GGG | 0.482229 | tig0044967:+1719 | Msa1465150:intergenic |
| AAGATTGATTTGAAGTTGGA+TGG | 0.484032 | tig0044967:-1411 | Msa1465150:CDS |
| CTCAGGGGTGTTGGCAGAAG+AGG | 0.487176 | tig0044967:-519 | Msa1465150:intron |
| ATCTGAAGCTTCTTCTGAAG+AGG | 0.487237 | tig0044967:-1382 | Msa1465150:CDS |
| TTATACAGTGCAGTAGTTGA+AGG | 0.495394 | tig0044967:+1270 | Msa1465150:intergenic |
| GGCTGCAGCAACACCTAGAT+AGG | 0.496969 | tig0044967:+412 | Msa1465150:intergenic |
| ACCTTTACAGATCCACTTGG+AGG | 0.500187 | tig0044967:+350 | Msa1465150:intergenic |
| GTTGTTAGGATTAAAGGACT+TGG | 0.504860 | tig0044967:-1330 | Msa1465150:CDS |
| AAGGTCAAGCTGGCTTTGGT+TGG | 0.507620 | tig0044967:-332 | Msa1465150:CDS |
| AGTGAGAAAGAGAGAAGAAG+AGG | 0.514407 | tig0044967:+1838 | Msa1465150:intergenic |
| CCTGCTAATGTTCTCACACC+AGG | 0.523507 | tig0044967:-646 | Msa1465150:intron |
| AATAACAATGGCAGAAGCTA+TGG | 0.524957 | tig0044967:+1877 | Msa1465150:intergenic |
| AACCTTAGGGGATTCGATGT+TGG | 0.525516 | tig0044967:+1715 | Msa1465150:intergenic |
| TGGATCTGTAAAGGTCAAGC+TGG | 0.527351 | tig0044967:-342 | Msa1465150:CDS |
| ATGTCAATGGATCTAACTGC+TGG | 0.528088 | tig0044967:+766 | Msa1465150:intergenic |
| GTTGAATGAAAGCTTCGCTT+AGG | 0.533152 | tig0044967:+1791 | Msa1465150:intergenic |
| TGACATTATTGGTCTTGGAA+CGG | 0.541864 | tig0044967:-749 | Msa1465150:CDS |
| ACCTCCAAGTGGATCTGTAA+AGG | 0.542413 | tig0044967:-351 | Msa1465150:CDS |
| TCTAGGTGTTGCTGCAGCCT+CGG | 0.555653 | tig0044967:-408 | Msa1465150:CDS |
| CTATGGCCGCCATTAGGGTG+TGG | 0.559450 | tig0044967:+1894 | None:intergenic |
| CCTGGTGTGAGAACATTAGC+AGG | 0.565403 | tig0044967:+646 | None:intergenic |
| AAGAAGAAAATTAACCTTAG+GGG | 0.566260 | tig0044967:+1703 | None:intergenic |
| TTTGGATGAATAAGATGTGA+TGG | 0.567909 | tig0044967:-1942 | None:intergenic |
| ATTGTGCTAGGGGCTGTGCT+GGG | 0.569150 | tig0044967:-829 | Msa1465150:intron |
| CACCAACATCGAATCCCCTA+AGG | 0.573206 | tig0044967:-1717 | Msa1465150:intron |
| CGGATGTTGATGTGACTGAA+TGG | 0.573571 | tig0044967:-1518 | Msa1465150:CDS |
| ACTGCACTGTATAAGGGTCT+TGG | 0.574721 | tig0044967:-1261 | Msa1465150:CDS |
| TATTTACAATTCATAAGACA+TGG | 0.574854 | tig0044967:-265 | Msa1465150:three_prime_UTR |
| GGGGTGAGTGAGGCCGAGAG+TGG | 0.577763 | tig0044967:+1739 | Msa1465150:intergenic |
| TGAAGAAAGTCCTTCAGAAG+AGG | 0.580183 | tig0044967:+1179 | Msa1465150:intergenic |
| TTGACCTTTACAGATCCACT+TGG | 0.582503 | tig0044967:+347 | Msa1465150:intergenic |
| TCAAAGAGGATTGGTTTGAT+CGG | 0.585762 | tig0044967:-1306 | Msa1465150:CDS |
| CAGTCACGTGACACCACTCT+CGG | 0.591727 | tig0044967:-1752 | Msa1465150:CDS |
| TATGGCCGCCATTAGGGTGT+GGG | 0.593825 | tig0044967:+1895 | Msa1465150:intergenic |
| GAAAGGAGACATACTAGCAG+TGG | 0.593850 | tig0044967:-1496 | Msa1465150:CDS |
| CGATGTTGGTGGGGTGAGTG+AGG | 0.602177 | tig0044967:+1729 | Msa1465150:intergenic |
| TAGGGGATTCGATGTTGGTG+GGG | 0.614139 | tig0044967:+1720 | Msa1465150:intergenic |
| TTAAAGGACTTGGATCAAAG+AGG | 0.618325 | tig0044967:-1320 | Msa1465150:CDS |
| ATTAGATGCTGATCAGTGCA+AGG | 0.622870 | tig0044967:-450 | Msa1465150:CDS |
| GGTGAAAACATCACTATAGG+TGG | 0.627383 | tig0044967:+481 | Msa1465150:intergenic |
| CTTACTTACAAACCTCCAAG+TGG | 0.646870 | tig0044967:-362 | Msa1465150:CDS |
| TCAAAACCATGGATAATACA+GGG | 0.649521 | tig0044967:+220 | Msa1465150:intergenic |
| ACTGTATAAGGGTCTTGGTG+AGG | 0.650936 | tig0044967:-1256 | Msa1465150:CDS |
| AAGTCCTTTAATCCTAACAA+CGG | 0.658258 | tig0044967:+1332 | Msa1465150:intergenic |
| AAAGGAGACATACTAGCAGT+GGG | 0.660959 | tig0044967:-1495 | Msa1465150:CDS |
| AGTGCAAGGAATTGAAAATG+GGG | 0.671375 | tig0044967:-436 | Msa1465150:CDS |
| GTTGATGTGACTGAATGGAA+AGG | 0.683142 | tig0044967:-1513 | Msa1465150:CDS |
| TAAGTAAGATGGATAAAACG+AGG | 0.697138 | tig0044967:+377 | Msa1465150:intergenic |
| GTAAGATGGATAAAACGAGG+AGG | 0.715083 | tig0044967:+380 | Msa1465150:intergenic |
| AAAACGAGGAGGATTTGCCG+AGG | 0.716110 | tig0044967:+391 | Msa1465150:intergenic |
| AAACCATGGATAATACAGGG+TGG | 0.728405 | tig0044967:+223 | Msa1465150:intergenic |
| ACTCTCCCACACCCTAATGG+CGG | 0.754360 | tig0044967:-1900 | Msa1465150:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATTAGTAAATAGTAA+TGG | + | tig0044967:1134-1153 | Msa1465150:intergenic | 15.0% |
| !!! | AAATCAATGTTTCTAAAAAT+GGG | + | tig0044967:1198-1217 | Msa1465150:intergenic | 15.0% |
| !!! | AAAATCAATGTTTCTAAAAA+TGG | + | tig0044967:1199-1218 | Msa1465150:intergenic | 15.0% |
| !! | TGAATTGTAAATAAAAAACA+CGG | + | tig0044967:1892-1911 | Msa1465150:intergenic | 15.0% |
| !! | AAAACATTAGTAAATAGTAA+TGG | + | tig0044967:1134-1153 | Msa1465150:intergenic | 15.0% |
| !!! | AAATCAATGTTTCTAAAAAT+GGG | + | tig0044967:1198-1217 | Msa1465150:intergenic | 15.0% |
| !!! | AAAATCAATGTTTCTAAAAA+TGG | + | tig0044967:1199-1218 | Msa1465150:intergenic | 15.0% |
| !! | TGAATTGTAAATAAAAAACA+CGG | + | tig0044967:1892-1911 | Msa1465150:intergenic | 15.0% |
| !! | TGAAACAAAAAAAGAAACAT+GGG | + | tig0044967:498-517 | Msa1465150:intergenic | 20.0% |
| !! | ATGAAACAAAAAAAGAAACA+TGG | + | tig0044967:499-518 | Msa1465150:intergenic | 20.0% |
| !!! | AATTTTCACAAACACATTAA+AGG | + | tig0044967:602-621 | Msa1465150:intergenic | 20.0% |
| !!! | AATCAATGTTTCTAAAAATG+GGG | + | tig0044967:1197-1216 | Msa1465150:intergenic | 20.0% |
| !! | TATTTACAATTCATAAGACA+TGG | - | tig0044967:1899-1918 | Msa1465150:exon | 20.0% |
| !! | TGAAACAAAAAAAGAAACAT+GGG | + | tig0044967:498-517 | Msa1465150:intergenic | 20.0% |
| !! | ATGAAACAAAAAAAGAAACA+TGG | + | tig0044967:499-518 | Msa1465150:intergenic | 20.0% |
| !!! | AATTTTCACAAACACATTAA+AGG | + | tig0044967:602-621 | Msa1465150:intergenic | 20.0% |
| !!! | AATCAATGTTTCTAAAAATG+GGG | + | tig0044967:1197-1216 | Msa1465150:intergenic | 20.0% |
| !! | TATTTACAATTCATAAGACA+TGG | - | tig0044967:1899-1918 | Msa1465150:exon | 20.0% |
| !!! | TTTTGAGAAAGCAATAACAA+TGG | + | tig0044967:302-321 | Msa1465150:intergenic | 25.0% |
| ! | AAGAAGAAAATTAACCTTAG+GGG | + | tig0044967:464-483 | Msa1465150:intergenic | 25.0% |
| ! | GAAGAAGAAAATTAACCTTA+GGG | + | tig0044967:465-484 | Msa1465150:intergenic | 25.0% |
| ! | TGAAGAAGAAAATTAACCTT+AGG | + | tig0044967:466-485 | Msa1465150:intergenic | 25.0% |
| ! | AGTGTTTGATGTGTTAAAAT+AGG | - | tig0044967:1101-1120 | Msa1465150:intron | 25.0% |
| ! | GTGTTTGATGTGTTAAAATA+GGG | - | tig0044967:1102-1121 | Msa1465150:intron | 25.0% |
| !! | ATCATCACAAACTTTAGAAA+TGG | - | tig0044967:1220-1239 | Msa1465150:CDS | 25.0% |
| !!! | GTTTCTTCTGGAATAATTTT+TGG | - | tig0044967:1476-1495 | Msa1465150:CDS | 25.0% |
| !!! | TTCTGGAATAATTTTTGGAA+GGG | - | tig0044967:1481-1500 | Msa1465150:CDS | 25.0% |
| !!! | ATCAGCATCTAATATTTTAG+CGG | + | tig0044967:1707-1726 | Msa1465150:intergenic | 25.0% |
| ! | TGTAAATAAAAAACACGGTT+TGG | + | tig0044967:1887-1906 | Msa1465150:intergenic | 25.0% |
| ! | AGACATGGAAAAATTTGAAA+CGG | - | tig0044967:1914-1933 | Msa1465150:five_prime_UTR | 25.0% |
| !!! | TTTTGAGAAAGCAATAACAA+TGG | + | tig0044967:302-321 | Msa1465150:intergenic | 25.0% |
| ! | AAGAAGAAAATTAACCTTAG+GGG | + | tig0044967:464-483 | Msa1465150:intergenic | 25.0% |
| ! | GAAGAAGAAAATTAACCTTA+GGG | + | tig0044967:465-484 | Msa1465150:intergenic | 25.0% |
| ! | TGAAGAAGAAAATTAACCTT+AGG | + | tig0044967:466-485 | Msa1465150:intergenic | 25.0% |
| ! | AGTGTTTGATGTGTTAAAAT+AGG | - | tig0044967:1101-1120 | Msa1465150:intron | 25.0% |
| ! | GTGTTTGATGTGTTAAAATA+GGG | - | tig0044967:1102-1121 | Msa1465150:intron | 25.0% |
| !! | ATCATCACAAACTTTAGAAA+TGG | - | tig0044967:1220-1239 | Msa1465150:CDS | 25.0% |
| !!! | GTTTCTTCTGGAATAATTTT+TGG | - | tig0044967:1476-1495 | Msa1465150:CDS | 25.0% |
| !!! | TTCTGGAATAATTTTTGGAA+GGG | - | tig0044967:1481-1500 | Msa1465150:CDS | 25.0% |
| !!! | ATCAGCATCTAATATTTTAG+CGG | + | tig0044967:1707-1726 | Msa1465150:intergenic | 25.0% |
| ! | TGTAAATAAAAAACACGGTT+TGG | + | tig0044967:1887-1906 | Msa1465150:intergenic | 25.0% |
| ! | AGACATGGAAAAATTTGAAA+CGG | - | tig0044967:1914-1933 | Msa1465150:five_prime_UTR | 25.0% |
| ! | AAAGATCTCTTTTTCTGCTA+CGG | - | tig0044967:626-645 | Msa1465150:intron | 30.0% |
| !! | GAACAAGATTGATTTGAAGT+TGG | - | tig0044967:749-768 | Msa1465150:CDS | 30.0% |
| !! | AAGATTGATTTGAAGTTGGA+TGG | - | tig0044967:753-772 | Msa1465150:CDS | 30.0% |
| AAGTCCTTTAATCCTAACAA+CGG | + | tig0044967:835-854 | Msa1465150:intergenic | 30.0% | |
| ATATACACACAAGACAAGTA+GGG | + | tig0044967:1253-1272 | Msa1465150:intergenic | 30.0% | |
| GTTAGATCCATTGACATTAT+TGG | - | tig0044967:1404-1423 | Msa1465150:CDS | 30.0% | |
| !!! | CTTCTGGAATAATTTTTGGA+AGG | - | tig0044967:1480-1499 | Msa1465150:CDS | 30.0% |
| ! | TCTAAAATCTGATCTGTACT+TGG | - | tig0044967:1610-1629 | Msa1465150:intron | 30.0% |
| TAAGTAAGATGGATAAAACG+AGG | + | tig0044967:1790-1809 | Msa1465150:intergenic | 30.0% | |
| !! | GAAAAGGTTTGACTTTTGAT+AGG | - | tig0044967:1854-1873 | Msa1465150:CDS | 30.0% |
| ! | GACATGGAAAAATTTGAAAC+GGG | - | tig0044967:1915-1934 | Msa1465150:five_prime_UTR | 30.0% |
| ! | AAAGATCTCTTTTTCTGCTA+CGG | - | tig0044967:626-645 | Msa1465150:intron | 30.0% |
| !! | GAACAAGATTGATTTGAAGT+TGG | - | tig0044967:749-768 | Msa1465150:CDS | 30.0% |
| !! | AAGATTGATTTGAAGTTGGA+TGG | - | tig0044967:753-772 | Msa1465150:CDS | 30.0% |
| AAGTCCTTTAATCCTAACAA+CGG | + | tig0044967:835-854 | Msa1465150:intergenic | 30.0% | |
| ATATACACACAAGACAAGTA+GGG | + | tig0044967:1253-1272 | Msa1465150:intergenic | 30.0% | |
| GTTAGATCCATTGACATTAT+TGG | - | tig0044967:1404-1423 | Msa1465150:CDS | 30.0% | |
| !!! | CTTCTGGAATAATTTTTGGA+AGG | - | tig0044967:1480-1499 | Msa1465150:CDS | 30.0% |
| ! | TCTAAAATCTGATCTGTACT+TGG | - | tig0044967:1610-1629 | Msa1465150:intron | 30.0% |
| TAAGTAAGATGGATAAAACG+AGG | + | tig0044967:1790-1809 | Msa1465150:intergenic | 30.0% | |
| !! | GAAAAGGTTTGACTTTTGAT+AGG | - | tig0044967:1854-1873 | Msa1465150:CDS | 30.0% |
| ! | GACATGGAAAAATTTGAAAC+GGG | - | tig0044967:1915-1934 | Msa1465150:five_prime_UTR | 30.0% |
| AATAACAATGGCAGAAGCTA+TGG | + | tig0044967:290-309 | Msa1465150:intergenic | 35.0% | |
| !!! | ACTTGTTGATTTTCTCGTTG+TGG | - | tig0044967:546-565 | Msa1465150:intron | 35.0% |
| !!! | CTTGTTGATTTTCTCGTTGT+GGG | - | tig0044967:547-566 | Msa1465150:intron | 35.0% |
| AGCAGAAAAAGAGATCTTTC+AGG | + | tig0044967:625-644 | Msa1465150:intergenic | 35.0% | |
| TCAACCGTTGTTAGGATTAA+AGG | - | tig0044967:828-847 | Msa1465150:intron | 35.0% | |
| GTTGTTAGGATTAAAGGACT+TGG | - | tig0044967:834-853 | Msa1465150:intron | 35.0% | |
| TTAAAGGACTTGGATCAAAG+AGG | - | tig0044967:844-863 | Msa1465150:intron | 35.0% | |
| !! | TCAAAGAGGATTGGTTTGAT+CGG | - | tig0044967:858-877 | Msa1465150:intron | 35.0% |
| TTATACAGTGCAGTAGTTGA+AGG | + | tig0044967:897-916 | Msa1465150:intergenic | 35.0% | |
| TTCAACTACTGCACTGTATA+AGG | - | tig0044967:896-915 | Msa1465150:intron | 35.0% | |
| TCAACTACTGCACTGTATAA+GGG | - | tig0044967:897-916 | Msa1465150:intron | 35.0% | |
| ! | CACAAACTTTAGAAATGGTG+AGG | - | tig0044967:1225-1244 | Msa1465150:CDS | 35.0% |
| CATATACACACAAGACAAGT+AGG | + | tig0044967:1254-1273 | Msa1465150:intergenic | 35.0% | |
| TTATAGCTACATTTGATGCG+TGG | - | tig0044967:1306-1325 | Msa1465150:CDS | 35.0% | |
| TATAGCTACATTTGATGCGT+GGG | - | tig0044967:1307-1326 | Msa1465150:CDS | 35.0% | |
| ! | TCCATTGACATTATTGGTCT+TGG | - | tig0044967:1410-1429 | Msa1465150:CDS | 35.0% |
| TCCAAGACCAATAATGTCAA+TGG | + | tig0044967:1414-1433 | Msa1465150:intergenic | 35.0% | |
| !! | TGACATTATTGGTCTTGGAA+CGG | - | tig0044967:1415-1434 | Msa1465150:CDS | 35.0% |
| !! | TTGAGCTTTTTCTCCAATTC+AGG | + | tig0044967:1443-1462 | Msa1465150:intergenic | 35.0% |
| !!! | ATCTGTACTTGGTGATGTTT+TGG | - | tig0044967:1621-1640 | Msa1465150:intron | 35.0% |
| TCAGTGCAAGGAATTGAAAA+TGG | - | tig0044967:1726-1745 | Msa1465150:CDS | 35.0% | |
| CAGTGCAAGGAATTGAAAAT+GGG | - | tig0044967:1727-1746 | Msa1465150:CDS | 35.0% | |
| AGTGCAAGGAATTGAAAATG+GGG | - | tig0044967:1728-1747 | Msa1465150:CDS | 35.0% | |
| TTGGAGGTTTGTAAGTAAGA+TGG | + | tig0044967:1801-1820 | Msa1465150:intergenic | 35.0% | |
| AATAACAATGGCAGAAGCTA+TGG | + | tig0044967:290-309 | Msa1465150:intergenic | 35.0% | |
| !!! | ACTTGTTGATTTTCTCGTTG+TGG | - | tig0044967:546-565 | Msa1465150:intron | 35.0% |
| !!! | CTTGTTGATTTTCTCGTTGT+GGG | - | tig0044967:547-566 | Msa1465150:intron | 35.0% |
| AGCAGAAAAAGAGATCTTTC+AGG | + | tig0044967:625-644 | Msa1465150:intergenic | 35.0% | |
| TCAACCGTTGTTAGGATTAA+AGG | - | tig0044967:828-847 | Msa1465150:intron | 35.0% | |
| GTTGTTAGGATTAAAGGACT+TGG | - | tig0044967:834-853 | Msa1465150:intron | 35.0% | |
| TTAAAGGACTTGGATCAAAG+AGG | - | tig0044967:844-863 | Msa1465150:intron | 35.0% | |
| !! | TCAAAGAGGATTGGTTTGAT+CGG | - | tig0044967:858-877 | Msa1465150:intron | 35.0% |
| TTATACAGTGCAGTAGTTGA+AGG | + | tig0044967:897-916 | Msa1465150:intergenic | 35.0% | |
| TTCAACTACTGCACTGTATA+AGG | - | tig0044967:896-915 | Msa1465150:intron | 35.0% | |
| TCAACTACTGCACTGTATAA+GGG | - | tig0044967:897-916 | Msa1465150:intron | 35.0% | |
| ! | CACAAACTTTAGAAATGGTG+AGG | - | tig0044967:1225-1244 | Msa1465150:CDS | 35.0% |
| CATATACACACAAGACAAGT+AGG | + | tig0044967:1254-1273 | Msa1465150:intergenic | 35.0% | |
| TTATAGCTACATTTGATGCG+TGG | - | tig0044967:1306-1325 | Msa1465150:CDS | 35.0% | |
| TATAGCTACATTTGATGCGT+GGG | - | tig0044967:1307-1326 | Msa1465150:CDS | 35.0% | |
| ! | TCCATTGACATTATTGGTCT+TGG | - | tig0044967:1410-1429 | Msa1465150:CDS | 35.0% |
| TCCAAGACCAATAATGTCAA+TGG | + | tig0044967:1414-1433 | Msa1465150:intergenic | 35.0% | |
| !! | TGACATTATTGGTCTTGGAA+CGG | - | tig0044967:1415-1434 | Msa1465150:CDS | 35.0% |
| !! | TTGAGCTTTTTCTCCAATTC+AGG | + | tig0044967:1443-1462 | Msa1465150:intergenic | 35.0% |
| !!! | ATCTGTACTTGGTGATGTTT+TGG | - | tig0044967:1621-1640 | Msa1465150:intron | 35.0% |
| TCAGTGCAAGGAATTGAAAA+TGG | - | tig0044967:1726-1745 | Msa1465150:CDS | 35.0% | |
| CAGTGCAAGGAATTGAAAAT+GGG | - | tig0044967:1727-1746 | Msa1465150:CDS | 35.0% | |
| AGTGCAAGGAATTGAAAATG+GGG | - | tig0044967:1728-1747 | Msa1465150:CDS | 35.0% | |
| TTGGAGGTTTGTAAGTAAGA+TGG | + | tig0044967:1801-1820 | Msa1465150:intergenic | 35.0% | |
| AGTGAGAAAGAGAGAAGAAG+AGG | + | tig0044967:329-348 | Msa1465150:intergenic | 40.0% | |
| GTTGAATGAAAGCTTCGCTT+AGG | + | tig0044967:376-395 | Msa1465150:intergenic | 40.0% | |
| GTTGATGTGACTGAATGGAA+AGG | - | tig0044967:651-670 | Msa1465150:CDS | 40.0% | |
| AAAGGAGACATACTAGCAGT+GGG | - | tig0044967:669-688 | Msa1465150:CDS | 40.0% | |
| ! | ATCTGAAGCTTCTTCTGAAG+AGG | - | tig0044967:782-801 | Msa1465150:CDS | 40.0% |
| ! | TCTTCTGAAGAGGATTTCTC+TGG | - | tig0044967:792-811 | Msa1465150:CDS | 40.0% |
| GAGGATTTCTCTGGTAAAGT+TGG | - | tig0044967:801-820 | Msa1465150:CDS | 40.0% | |
| TTGGTCAATCAACCGTTGTT+AGG | - | tig0044967:820-839 | Msa1465150:CDS | 40.0% | |
| ATTGTTCTTGCCTCTTCTGA+AGG | - | tig0044967:975-994 | Msa1465150:intron | 40.0% | |
| TGAAGAAAGTCCTTCAGAAG+AGG | + | tig0044967:988-1007 | Msa1465150:intergenic | 40.0% | |
| ACTGCTTATGCAATTGCATC+TGG | - | tig0044967:1023-1042 | Msa1465150:intron | 40.0% | |
| ATGTCAATGGATCTAACTGC+TGG | + | tig0044967:1401-1420 | Msa1465150:intergenic | 40.0% | |
| !! | GACATTATTGGTCTTGGAAC+GGG | - | tig0044967:1416-1435 | Msa1465150:CDS | 40.0% |
| GAGAAAAAGCTCAAGTATGC+TGG | - | tig0044967:1449-1468 | Msa1465150:CDS | 40.0% | |
| TATGCTGGAGATGTTTCTTC+TGG | - | tig0044967:1464-1483 | Msa1465150:CDS | 40.0% | |
| !! | TTTAAAGTGTCGTACGAACC+TGG | + | tig0044967:1539-1558 | Msa1465150:intergenic | 40.0% |
| !!! | TTGGTGATGTTTTGGTCTCA+GGG | - | tig0044967:1629-1648 | Msa1465150:intron | 40.0% |
| GGTGAAAACATCACTATAGG+TGG | + | tig0044967:1686-1705 | Msa1465150:intergenic | 40.0% | |
| AGCGGTGAAAACATCACTAT+AGG | + | tig0044967:1689-1708 | Msa1465150:intergenic | 40.0% | |
| ATTAGATGCTGATCAGTGCA+AGG | - | tig0044967:1714-1733 | Msa1465150:intron | 40.0% | |
| TTGAAAATGGGGTCCTATCT+AGG | - | tig0044967:1739-1758 | Msa1465150:CDS | 40.0% | |
| GTAAGATGGATAAAACGAGG+AGG | + | tig0044967:1787-1806 | Msa1465150:intergenic | 40.0% | |
| CTTACTTACAAACCTCCAAG+TGG | - | tig0044967:1802-1821 | Msa1465150:CDS | 40.0% | |
| TTGACCTTTACAGATCCACT+TGG | + | tig0044967:1820-1839 | Msa1465150:intergenic | 40.0% | |
| AGTGAGAAAGAGAGAAGAAG+AGG | + | tig0044967:329-348 | Msa1465150:intergenic | 40.0% | |
| GTTGAATGAAAGCTTCGCTT+AGG | + | tig0044967:376-395 | Msa1465150:intergenic | 40.0% | |
| GTTGATGTGACTGAATGGAA+AGG | - | tig0044967:651-670 | Msa1465150:CDS | 40.0% | |
| AAAGGAGACATACTAGCAGT+GGG | - | tig0044967:669-688 | Msa1465150:CDS | 40.0% | |
| ! | ATCTGAAGCTTCTTCTGAAG+AGG | - | tig0044967:782-801 | Msa1465150:CDS | 40.0% |
| ! | TCTTCTGAAGAGGATTTCTC+TGG | - | tig0044967:792-811 | Msa1465150:CDS | 40.0% |
| GAGGATTTCTCTGGTAAAGT+TGG | - | tig0044967:801-820 | Msa1465150:CDS | 40.0% | |
| TTGGTCAATCAACCGTTGTT+AGG | - | tig0044967:820-839 | Msa1465150:CDS | 40.0% | |
| ATTGTTCTTGCCTCTTCTGA+AGG | - | tig0044967:975-994 | Msa1465150:intron | 40.0% | |
| TGAAGAAAGTCCTTCAGAAG+AGG | + | tig0044967:988-1007 | Msa1465150:intergenic | 40.0% | |
| ACTGCTTATGCAATTGCATC+TGG | - | tig0044967:1023-1042 | Msa1465150:intron | 40.0% | |
| ATGTCAATGGATCTAACTGC+TGG | + | tig0044967:1401-1420 | Msa1465150:intergenic | 40.0% | |
| !! | GACATTATTGGTCTTGGAAC+GGG | - | tig0044967:1416-1435 | Msa1465150:CDS | 40.0% |
| GAGAAAAAGCTCAAGTATGC+TGG | - | tig0044967:1449-1468 | Msa1465150:CDS | 40.0% | |
| TATGCTGGAGATGTTTCTTC+TGG | - | tig0044967:1464-1483 | Msa1465150:CDS | 40.0% | |
| !! | TTTAAAGTGTCGTACGAACC+TGG | + | tig0044967:1539-1558 | Msa1465150:intergenic | 40.0% |
| !!! | TTGGTGATGTTTTGGTCTCA+GGG | - | tig0044967:1629-1648 | Msa1465150:intron | 40.0% |
| GGTGAAAACATCACTATAGG+TGG | + | tig0044967:1686-1705 | Msa1465150:intergenic | 40.0% | |
| AGCGGTGAAAACATCACTAT+AGG | + | tig0044967:1689-1708 | Msa1465150:intergenic | 40.0% | |
| ATTAGATGCTGATCAGTGCA+AGG | - | tig0044967:1714-1733 | Msa1465150:intron | 40.0% | |
| TTGAAAATGGGGTCCTATCT+AGG | - | tig0044967:1739-1758 | Msa1465150:CDS | 40.0% | |
| GTAAGATGGATAAAACGAGG+AGG | + | tig0044967:1787-1806 | Msa1465150:intergenic | 40.0% | |
| CTTACTTACAAACCTCCAAG+TGG | - | tig0044967:1802-1821 | Msa1465150:CDS | 40.0% | |
| TTGACCTTTACAGATCCACT+TGG | + | tig0044967:1820-1839 | Msa1465150:intergenic | 40.0% | |
| TTAGGGGATTCGATGTTGGT+GGG | + | tig0044967:448-467 | Msa1465150:intergenic | 45.0% | |
| AACCTTAGGGGATTCGATGT+TGG | + | tig0044967:452-471 | Msa1465150:intergenic | 45.0% | |
| CGGATGTTGATGTGACTGAA+TGG | - | tig0044967:646-665 | Msa1465150:intron | 45.0% | |
| GAAAGGAGACATACTAGCAG+TGG | - | tig0044967:668-687 | Msa1465150:CDS | 45.0% | |
| GGACTTGGATCAAAGAGGAT+TGG | - | tig0044967:849-868 | Msa1465150:intron | 45.0% | |
| !! | AGGATTGGTTTGATCGGTCT+TGG | - | tig0044967:864-883 | Msa1465150:intron | 45.0% |
| ACTGCACTGTATAAGGGTCT+TGG | - | tig0044967:903-922 | Msa1465150:intron | 45.0% | |
| ACTGTATAAGGGTCTTGGTG+AGG | - | tig0044967:908-927 | Msa1465150:intron | 45.0% | |
| !!! | CTTGGTGATGTTTTGGTCTC+AGG | - | tig0044967:1628-1647 | Msa1465150:intron | 45.0% |
| !!! | TGGTGATGTTTTGGTCTCAG+GGG | - | tig0044967:1630-1649 | Msa1465150:intron | 45.0% |
| ACCTCCAAGTGGATCTGTAA+AGG | - | tig0044967:1813-1832 | Msa1465150:CDS | 45.0% | |
| ACCTTTACAGATCCACTTGG+AGG | + | tig0044967:1817-1836 | Msa1465150:intergenic | 45.0% | |
| TGGATCTGTAAAGGTCAAGC+TGG | - | tig0044967:1822-1841 | Msa1465150:CDS | 45.0% | |
| ! | TGTAAAGGTCAAGCTGGCTT+TGG | - | tig0044967:1828-1847 | Msa1465150:CDS | 45.0% |
| !! | AAGCTGGCTTTGGTTGGAAA+AGG | - | tig0044967:1838-1857 | Msa1465150:CDS | 45.0% |
| TTAGGGGATTCGATGTTGGT+GGG | + | tig0044967:448-467 | Msa1465150:intergenic | 45.0% | |
| AACCTTAGGGGATTCGATGT+TGG | + | tig0044967:452-471 | Msa1465150:intergenic | 45.0% | |
| CGGATGTTGATGTGACTGAA+TGG | - | tig0044967:646-665 | Msa1465150:intron | 45.0% | |
| GAAAGGAGACATACTAGCAG+TGG | - | tig0044967:668-687 | Msa1465150:CDS | 45.0% | |
| GGACTTGGATCAAAGAGGAT+TGG | - | tig0044967:849-868 | Msa1465150:intron | 45.0% | |
| !! | AGGATTGGTTTGATCGGTCT+TGG | - | tig0044967:864-883 | Msa1465150:intron | 45.0% |
| ACTGCACTGTATAAGGGTCT+TGG | - | tig0044967:903-922 | Msa1465150:intron | 45.0% | |
| ACTGTATAAGGGTCTTGGTG+AGG | - | tig0044967:908-927 | Msa1465150:intron | 45.0% | |
| !!! | CTTGGTGATGTTTTGGTCTC+AGG | - | tig0044967:1628-1647 | Msa1465150:intron | 45.0% |
| !!! | TGGTGATGTTTTGGTCTCAG+GGG | - | tig0044967:1630-1649 | Msa1465150:intron | 45.0% |
| ACCTCCAAGTGGATCTGTAA+AGG | - | tig0044967:1813-1832 | Msa1465150:CDS | 45.0% | |
| ACCTTTACAGATCCACTTGG+AGG | + | tig0044967:1817-1836 | Msa1465150:intergenic | 45.0% | |
| TGGATCTGTAAAGGTCAAGC+TGG | - | tig0044967:1822-1841 | Msa1465150:CDS | 45.0% | |
| ! | TGTAAAGGTCAAGCTGGCTT+TGG | - | tig0044967:1828-1847 | Msa1465150:CDS | 45.0% |
| !! | AAGCTGGCTTTGGTTGGAAA+AGG | - | tig0044967:1838-1857 | Msa1465150:CDS | 45.0% |
| TAGACTCTCCCACACCCTAA+TGG | - | tig0044967:261-280 | Msa1465150:three_prime_UTR | 50.0% | |
| AGAAGCTATGGCCGCCATTA+GGG | + | tig0044967:278-297 | Msa1465150:intergenic | 50.0% | |
| TAGGGGATTCGATGTTGGTG+GGG | + | tig0044967:447-466 | Msa1465150:intergenic | 50.0% | |
| CTTAGGGGATTCGATGTTGG+TGG | + | tig0044967:449-468 | Msa1465150:intergenic | 50.0% | |
| CACCAACATCGAATCCCCTA+AGG | - | tig0044967:447-466 | Msa1465150:CDS | 50.0% | |
| CGTGGGCTTGAATTGTGCTA+GGG | - | tig0044967:1324-1343 | Msa1465150:CDS | 50.0% | |
| GTGGGCTTGAATTGTGCTAG+GGG | - | tig0044967:1325-1344 | Msa1465150:CDS | 50.0% | |
| TCTTGGAACGGGACCTGAAT+TGG | - | tig0044967:1427-1446 | Msa1465150:CDS | 50.0% | |
| CCTGGTGTGAGAACATTAGC+AGG | + | tig0044967:1521-1540 | Msa1465150:intergenic | 50.0% | |
| CCTGCTAATGTTCTCACACC+AGG | - | tig0044967:1518-1537 | Msa1465150:CDS | 50.0% | |
| !!! | TGTTTTGGTCTCAGGGGTGT+TGG | - | tig0044967:1636-1655 | Msa1465150:intron | 50.0% |
| !! | GTTGGCAGAAGAGGCATCTA+AGG | - | tig0044967:1654-1673 | Msa1465150:intron | 50.0% |
| AAAACGAGGAGGATTTGCCG+AGG | + | tig0044967:1776-1795 | Msa1465150:intergenic | 50.0% | |
| !! | AAGGTCAAGCTGGCTTTGGT+TGG | - | tig0044967:1832-1851 | Msa1465150:CDS | 50.0% |
| TAGACTCTCCCACACCCTAA+TGG | - | tig0044967:261-280 | Msa1465150:three_prime_UTR | 50.0% | |
| AGAAGCTATGGCCGCCATTA+GGG | + | tig0044967:278-297 | Msa1465150:intergenic | 50.0% | |
| TAGGGGATTCGATGTTGGTG+GGG | + | tig0044967:447-466 | Msa1465150:intergenic | 50.0% | |
| CTTAGGGGATTCGATGTTGG+TGG | + | tig0044967:449-468 | Msa1465150:intergenic | 50.0% | |
| CACCAACATCGAATCCCCTA+AGG | - | tig0044967:447-466 | Msa1465150:CDS | 50.0% | |
| CGTGGGCTTGAATTGTGCTA+GGG | - | tig0044967:1324-1343 | Msa1465150:CDS | 50.0% | |
| GTGGGCTTGAATTGTGCTAG+GGG | - | tig0044967:1325-1344 | Msa1465150:CDS | 50.0% | |
| TCTTGGAACGGGACCTGAAT+TGG | - | tig0044967:1427-1446 | Msa1465150:CDS | 50.0% | |
| CCTGGTGTGAGAACATTAGC+AGG | + | tig0044967:1521-1540 | Msa1465150:intergenic | 50.0% | |
| CCTGCTAATGTTCTCACACC+AGG | - | tig0044967:1518-1537 | Msa1465150:CDS | 50.0% | |
| !!! | TGTTTTGGTCTCAGGGGTGT+TGG | - | tig0044967:1636-1655 | Msa1465150:intron | 50.0% |
| !! | GTTGGCAGAAGAGGCATCTA+AGG | - | tig0044967:1654-1673 | Msa1465150:intron | 50.0% |
| AAAACGAGGAGGATTTGCCG+AGG | + | tig0044967:1776-1795 | Msa1465150:intergenic | 50.0% | |
| !! | AAGGTCAAGCTGGCTTTGGT+TGG | - | tig0044967:1832-1851 | Msa1465150:CDS | 50.0% |
| ACTCTCCCACACCCTAATGG+CGG | - | tig0044967:264-283 | Msa1465150:three_prime_UTR | 55.0% | |
| TATGGCCGCCATTAGGGTGT+GGG | + | tig0044967:272-291 | Msa1465150:intergenic | 55.0% | |
| CAGAAGCTATGGCCGCCATT+AGG | + | tig0044967:279-298 | Msa1465150:intergenic | 55.0% | |
| CAGTCACGTGACACCACTCT+CGG | - | tig0044967:412-431 | Msa1465150:CDS | 55.0% | |
| GCGTGGGCTTGAATTGTGCT+AGG | - | tig0044967:1323-1342 | Msa1465150:CDS | 55.0% | |
| AATTGTGCTAGGGGCTGTGC+TGG | - | tig0044967:1334-1353 | Msa1465150:CDS | 55.0% | |
| ATTGTGCTAGGGGCTGTGCT+GGG | - | tig0044967:1335-1354 | Msa1465150:CDS | 55.0% | |
| GGCTGCAGCAACACCTAGAT+AGG | + | tig0044967:1755-1774 | Msa1465150:intergenic | 55.0% | |
| !! | TCTAGGTGTTGCTGCAGCCT+CGG | - | tig0044967:1756-1775 | Msa1465150:CDS | 55.0% |
| ACTCTCCCACACCCTAATGG+CGG | - | tig0044967:264-283 | Msa1465150:three_prime_UTR | 55.0% | |
| TATGGCCGCCATTAGGGTGT+GGG | + | tig0044967:272-291 | Msa1465150:intergenic | 55.0% | |
| CAGAAGCTATGGCCGCCATT+AGG | + | tig0044967:279-298 | Msa1465150:intergenic | 55.0% | |
| CAGTCACGTGACACCACTCT+CGG | - | tig0044967:412-431 | Msa1465150:CDS | 55.0% | |
| GCGTGGGCTTGAATTGTGCT+AGG | - | tig0044967:1323-1342 | Msa1465150:CDS | 55.0% | |
| AATTGTGCTAGGGGCTGTGC+TGG | - | tig0044967:1334-1353 | Msa1465150:CDS | 55.0% | |
| ATTGTGCTAGGGGCTGTGCT+GGG | - | tig0044967:1335-1354 | Msa1465150:CDS | 55.0% | |
| GGCTGCAGCAACACCTAGAT+AGG | + | tig0044967:1755-1774 | Msa1465150:intergenic | 55.0% | |
| !! | TCTAGGTGTTGCTGCAGCCT+CGG | - | tig0044967:1756-1775 | Msa1465150:CDS | 55.0% |
| CTATGGCCGCCATTAGGGTG+TGG | + | tig0044967:273-292 | Msa1465150:intergenic | 60.0% | |
| ! | CGATGTTGGTGGGGTGAGTG+AGG | + | tig0044967:438-457 | Msa1465150:intergenic | 60.0% |
| CGCAGCTGCTAAGTCTGCTC+AGG | - | tig0044967:938-957 | Msa1465150:intron | 60.0% | |
| !! | CTCAGGGGTGTTGGCAGAAG+AGG | - | tig0044967:1645-1664 | Msa1465150:intron | 60.0% |
| CTATGGCCGCCATTAGGGTG+TGG | + | tig0044967:273-292 | Msa1465150:intergenic | 60.0% | |
| ! | CGATGTTGGTGGGGTGAGTG+AGG | + | tig0044967:438-457 | Msa1465150:intergenic | 60.0% |
| CGCAGCTGCTAAGTCTGCTC+AGG | - | tig0044967:938-957 | Msa1465150:intron | 60.0% | |
| !! | CTCAGGGGTGTTGGCAGAAG+AGG | - | tig0044967:1645-1664 | Msa1465150:intron | 60.0% |
| GGGGTGAGTGAGGCCGAGAG+TGG | + | tig0044967:428-447 | Msa1465150:intergenic | 70.0% | |
| GGGGTGAGTGAGGCCGAGAG+TGG | + | tig0044967:428-447 | Msa1465150:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0044967 | gene | 233 | 1953 | 233 | ID=Msa1465150;Name=Msa1465150 |
| tig0044967 | mRNA | 233 | 1953 | 233 | ID=Msa1465150-mRNA-1;Parent=Msa1465150;Name=Msa1465150-mRNA-1;_AED=0.02;_eAED=0.02;_QI=47|1|1|1|1|1|4|74|342 |
| tig0044967 | exon | 233 | 536 | 233 | ID=Msa1465150-mRNA-1:exon:24707;Parent=Msa1465150-mRNA-1 |
| tig0044967 | exon | 647 | 841 | 647 | ID=Msa1465150-mRNA-1:exon:24706;Parent=Msa1465150-mRNA-1 |
| tig0044967 | exon | 1142 | 1556 | 1142 | ID=Msa1465150-mRNA-1:exon:24705;Parent=Msa1465150-mRNA-1 |
| tig0044967 | exon | 1718 | 1953 | 1718 | ID=Msa1465150-mRNA-1:exon:24704;Parent=Msa1465150-mRNA-1 |
| tig0044967 | five_prime_UTR | 1907 | 1953 | 1907 | ID=Msa1465150-mRNA-1:five_prime_utr;Parent=Msa1465150-mRNA-1 |
| tig0044967 | CDS | 1718 | 1906 | 1718 | ID=Msa1465150-mRNA-1:cds;Parent=Msa1465150-mRNA-1 |
| tig0044967 | CDS | 1142 | 1556 | 1142 | ID=Msa1465150-mRNA-1:cds;Parent=Msa1465150-mRNA-1 |
| tig0044967 | CDS | 647 | 841 | 647 | ID=Msa1465150-mRNA-1:cds;Parent=Msa1465150-mRNA-1 |
| tig0044967 | CDS | 307 | 536 | 307 | ID=Msa1465150-mRNA-1:cds;Parent=Msa1465150-mRNA-1 |
| tig0044967 | three_prime_UTR | 233 | 306 | 233 | ID=Msa1465150-mRNA-1:three_prime_utr;Parent=Msa1465150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
