Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000153.t1 | XP_003610723.1 | 99.7 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 2.30E-175 | 624.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000153.t1 | Q43317 | 85.8 | 325 | 46 | 0 | 1 | 325 | 1 | 325 | 1.4e-157 | 557.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000153.t1 | B7FKU7 | 99.7 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 1.6e-175 | 624.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene008717 | MS.gene000153 | PPI |
| MS.gene000153 | MS.gene52446 | PPI |
| MS.gene054826 | MS.gene000153 | PPI |
| MS.gene000153 | MS.gene47527 | PPI |
| MS.gene000153 | MS.gene26579 | PPI |
| MS.gene000153 | MS.gene39577 | PPI |
| MS.gene058651 | MS.gene000153 | PPI |
| MS.gene02466 | MS.gene000153 | PPI |
| MS.gene023918 | MS.gene000153 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000153.t1 | MTR_5g006340 | 99.692 | 325 | 1 | 0 | 1 | 325 | 1 | 325 | 0.0 | 646 |
| MS.gene000153.t1 | MTR_1g103690 | 93.231 | 325 | 22 | 0 | 1 | 325 | 1 | 325 | 0.0 | 566 |
| MS.gene000153.t1 | MTR_1g081610 | 87.346 | 324 | 41 | 0 | 1 | 324 | 1 | 324 | 0.0 | 527 |
| MS.gene000153.t1 | MTR_4g087490 | 70.126 | 318 | 95 | 0 | 8 | 325 | 47 | 364 | 4.76e-169 | 474 |
| MS.gene000153.t1 | MTR_1g081620 | 72.897 | 321 | 87 | 0 | 4 | 324 | 3 | 323 | 2.31e-165 | 463 |
| MS.gene000153.t1 | MTR_1g081625 | 73.750 | 320 | 84 | 0 | 5 | 324 | 4 | 323 | 1.02e-161 | 454 |
| MS.gene000153.t1 | MTR_4g087510 | 65.723 | 318 | 100 | 2 | 8 | 325 | 47 | 355 | 2.64e-156 | 441 |
| MS.gene000153.t1 | MTR_7g078070 | 62.025 | 316 | 120 | 0 | 6 | 321 | 59 | 374 | 3.62e-144 | 412 |
| MS.gene000153.t1 | MTR_7g078070 | 62.662 | 308 | 115 | 0 | 14 | 321 | 7 | 314 | 3.71e-142 | 404 |
| MS.gene000153.t1 | MTR_7g087110 | 63.175 | 315 | 106 | 1 | 7 | 321 | 64 | 368 | 2.87e-136 | 391 |
| MS.gene000153.t1 | MTR_4g087520 | 74.074 | 270 | 70 | 0 | 56 | 325 | 1 | 270 | 2.06e-134 | 383 |
| MS.gene000153.t1 | MTR_1g081640 | 70.318 | 283 | 84 | 0 | 3 | 285 | 2 | 284 | 7.31e-130 | 373 |
| MS.gene000153.t1 | MTR_7g078070 | 62.989 | 281 | 104 | 0 | 41 | 321 | 1 | 281 | 7.53e-129 | 369 |
| MS.gene000153.t1 | MTR_5g095670 | 29.462 | 353 | 190 | 6 | 12 | 307 | 48 | 398 | 1.39e-40 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene000153.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene000153.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene000153.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene000153.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene000153.t1 | AT4G14880 | 83.699 | 319 | 52 | 0 | 6 | 324 | 3 | 321 | 0.0 | 516 |
| MS.gene000153.t1 | AT3G59760 | 74.528 | 318 | 81 | 0 | 7 | 324 | 112 | 429 | 2.07e-166 | 470 |
| MS.gene000153.t1 | AT3G59760 | 74.528 | 318 | 81 | 0 | 7 | 324 | 112 | 429 | 2.24e-166 | 470 |
| MS.gene000153.t1 | AT2G43750 | 74.534 | 322 | 82 | 0 | 3 | 324 | 70 | 391 | 6.16e-165 | 465 |
| MS.gene000153.t1 | AT2G43750 | 74.534 | 322 | 82 | 0 | 3 | 324 | 70 | 391 | 6.16e-165 | 465 |
| MS.gene000153.t1 | AT3G04940 | 67.593 | 324 | 105 | 0 | 1 | 324 | 1 | 324 | 2.95e-156 | 440 |
| MS.gene000153.t1 | AT3G04940 | 67.593 | 324 | 105 | 0 | 1 | 324 | 1 | 324 | 2.95e-156 | 440 |
| MS.gene000153.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene000153.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene000153.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene000153.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene000153.t1 | AT5G28020 | 70.093 | 321 | 96 | 0 | 4 | 324 | 3 | 323 | 9.97e-155 | 436 |
| MS.gene000153.t1 | AT3G59760 | 75.172 | 290 | 72 | 0 | 7 | 296 | 112 | 401 | 5.61e-151 | 431 |
| MS.gene000153.t1 | AT3G22460 | 78.519 | 270 | 38 | 1 | 56 | 325 | 1 | 250 | 3.89e-150 | 422 |
| MS.gene000153.t1 | AT5G28030 | 66.978 | 321 | 106 | 0 | 4 | 324 | 3 | 323 | 3.10e-145 | 412 |
| MS.gene000153.t1 | AT5G28030 | 66.978 | 321 | 106 | 0 | 4 | 324 | 3 | 323 | 3.10e-145 | 412 |
| MS.gene000153.t1 | AT5G28030 | 66.978 | 321 | 106 | 0 | 4 | 324 | 3 | 323 | 3.10e-145 | 412 |
| MS.gene000153.t1 | AT5G28030 | 66.978 | 321 | 106 | 0 | 4 | 324 | 3 | 323 | 3.10e-145 | 412 |
| MS.gene000153.t1 | AT3G61440 | 61.218 | 312 | 121 | 0 | 10 | 321 | 51 | 362 | 1.26e-135 | 390 |
| MS.gene000153.t1 | AT3G03630 | 61.562 | 320 | 113 | 1 | 4 | 323 | 95 | 404 | 3.51e-132 | 382 |
| MS.gene000153.t1 | AT3G61440 | 62.782 | 266 | 99 | 0 | 56 | 321 | 1 | 266 | 4.71e-117 | 339 |
| MS.gene000153.t1 | AT3G22460 | 86.188 | 181 | 25 | 0 | 8 | 188 | 8 | 188 | 2.27e-114 | 329 |
| MS.gene000153.t1 | AT5G28030 | 64.919 | 248 | 87 | 0 | 4 | 251 | 3 | 250 | 2.89e-111 | 324 |
| MS.gene000153.t1 | AT3G61440 | 59.160 | 262 | 107 | 0 | 10 | 271 | 51 | 312 | 1.03e-108 | 320 |
| MS.gene000153.t1 | AT3G61440 | 61.667 | 240 | 92 | 0 | 82 | 321 | 2 | 241 | 7.35e-103 | 302 |
| MS.gene000153.t1 | AT5G28020 | 67.932 | 237 | 76 | 0 | 88 | 324 | 1 | 237 | 2.04e-102 | 300 |
| MS.gene000153.t1 | AT1G55880 | 28.177 | 362 | 200 | 6 | 4 | 307 | 36 | 395 | 2.97e-38 | 140 |
| MS.gene000153.t1 | AT1G55880 | 30.833 | 240 | 124 | 3 | 12 | 210 | 44 | 282 | 3.97e-32 | 122 |
Find 89 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATTGACGCATTTGTTTC+TGG | 0.143270 | 5.4:+2042848 | MS.gene000153:CDS |
| AGAATCATTCTATTAGCTTT+TGG | 0.227837 | 5.4:+2042578 | MS.gene000153:CDS |
| GCTCCTTTCATTCCCTTTGC+AGG | 0.253208 | 5.4:-2042623 | None:intergenic |
| GATAAAACTAACCTTTATAT+TGG | 0.258346 | 5.4:-2042927 | None:intergenic |
| GCCAAAAGGCCAGAAAATTC+TGG | 0.272006 | 5.4:+2044478 | MS.gene000153:CDS |
| AGAGCAAAATTCCAATATAA+AGG | 0.317751 | 5.4:+2042916 | MS.gene000153:CDS |
| TTGTAGGTGGGAATATCTTC+TGG | 0.327966 | 5.4:+2044427 | MS.gene000153:intron |
| GTCTATTTAGATACACTAAT+GGG | 0.361833 | 5.4:-2042033 | None:intergenic |
| TGCCCGAGTTGCTGCAAAAC+TGG | 0.363669 | 5.4:+2042072 | MS.gene000153:CDS |
| ATGCCAGTGTTACCACTTGT+TGG | 0.374604 | 5.4:-2042479 | None:intergenic |
| AAACCACCGGTCCAGAGATA+TGG | 0.380421 | 5.4:+2042810 | MS.gene000153:CDS |
| AAATTGACGCATTTGTTTCT+GGG | 0.385410 | 5.4:+2042849 | MS.gene000153:CDS |
| TGGCATTGGATTAGCCTTCA+TGG | 0.398016 | 5.4:+2042496 | MS.gene000153:CDS |
| ATATTTCCCAGCACCGGTTA+TGG | 0.401918 | 5.4:-2042888 | None:intergenic |
| TGCTGCAAAACTGGAATTGA+TGG | 0.408030 | 5.4:+2042081 | MS.gene000153:CDS |
| ATTGGTGCTGGCTTTGTCCC+TGG | 0.414143 | 5.4:+2043602 | MS.gene000153:CDS |
| AGTCTATTTAGATACACTAA+TGG | 0.416944 | 5.4:-2042034 | None:intergenic |
| CTCCTTTCATTCCCTTTGCA+GGG | 0.417063 | 5.4:-2042622 | None:intergenic |
| TTTGTTTCTGGGATAGGTAC+TGG | 0.422736 | 5.4:+2042860 | MS.gene000153:CDS |
| GTGGAGAGTCCAGTGCTCTC+AGG | 0.426755 | 5.4:+2043076 | MS.gene000153:CDS |
| TTTCTCTTTATGTAGCTGAT+TGG | 0.431372 | 5.4:+2043043 | MS.gene000153:intron |
| ATTTGTGCTGTGTAGTTGAT+TGG | 0.433507 | 5.4:+2042004 | MS.gene000153:intron |
| CTTTCAAGACTCATTGAAGC+AGG | 0.439398 | 5.4:-2042554 | None:intergenic |
| TTATATACCTTAGGATTGGC+AGG | 0.440849 | 5.4:-2042713 | None:intergenic |
| TCCGTGCCTTTCCATATCTC+TGG | 0.444845 | 5.4:-2042821 | None:intergenic |
| TTTAAGAGCAAGAAGCTTTG+CGG | 0.453369 | 5.4:-2044213 | None:intergenic |
| GGTGGTACCATAACCGGTGC+TGG | 0.455664 | 5.4:+2042881 | MS.gene000153:CDS |
| CCAAAAGGCCAGAAAATTCT+GGG | 0.458163 | 5.4:+2044479 | MS.gene000153:CDS |
| GGTACTGGTGGTACCATAAC+CGG | 0.463243 | 5.4:+2042875 | MS.gene000153:CDS |
| AAGCTTCTTGCTCTTAAAGA+AGG | 0.465193 | 5.4:+2044218 | MS.gene000153:CDS |
| AACATGGCGGTCGAAAGGTC+TGG | 0.479511 | 5.4:+2041878 | None:intergenic |
| AATTATGAGCTTGTATCCCT+TGG | 0.481319 | 5.4:-2042525 | None:intergenic |
| AGCCTTCATGGCAGCAGCCA+AGG | 0.482589 | 5.4:+2042508 | MS.gene000153:CDS |
| TTCAAATTGTTGAAGTATGT+AGG | 0.487581 | 5.4:-2042687 | None:intergenic |
| GCCTTTCCATATCTCTGGAC+CGG | 0.488943 | 5.4:-2042816 | None:intergenic |
| AAGATTCAAGGGATTGGTGC+TGG | 0.499879 | 5.4:+2043590 | MS.gene000153:CDS |
| CCTCACAAGATTCAAGGGAT+TGG | 0.512359 | 5.4:+2043584 | MS.gene000153:CDS |
| TCAGGTCCTCACAAGATTCA+AGG | 0.512591 | 5.4:+2043578 | MS.gene000153:intron |
| AGGTACCTCTCGCCAAAGCT+TGG | 0.513254 | 5.4:-2045407 | None:intergenic |
| TCCCTTGGCTGCTGCCATGA+AGG | 0.514115 | 5.4:-2042510 | None:intergenic |
| CTGATAACATGGCGGTCGAA+AGG | 0.517264 | 5.4:+2041873 | None:intergenic |
| TGGAGAGTCCAGTGCTCTCA+GGG | 0.517606 | 5.4:+2043077 | MS.gene000153:CDS |
| ACAAGTGGTAACACTGGCAT+TGG | 0.517640 | 5.4:+2042482 | MS.gene000153:CDS |
| GCTATTTGAGTCAGTGAGAC+GGG | 0.519281 | 5.4:+2045439 | MS.gene000153:CDS |
| GGGGCTTATCACACCTGGAC+AGG | 0.526431 | 5.4:+2042305 | MS.gene000153:CDS |
| GAGAGCACTGGACTCTCCAC+TGG | 0.526480 | 5.4:-2043073 | None:intergenic |
| AAAGTTATACCAACCTGTCC+AGG | 0.526700 | 5.4:-2042318 | None:intergenic |
| GACGCATTTGTTTCTGGGAT+AGG | 0.530954 | 5.4:+2042854 | MS.gene000153:CDS |
| GACCCTGCAAAGGGAATGAA+AGG | 0.540714 | 5.4:+2042620 | MS.gene000153:CDS |
| CATGCTCTAGTGTAAAAGAC+AGG | 0.541025 | 5.4:+2042107 | MS.gene000153:CDS |
| TGTTGAAGTATGTAGGCATT+GGG | 0.542376 | 5.4:-2042680 | None:intergenic |
| CTTTATGTAGCTGATTGGTG+TGG | 0.542393 | 5.4:+2043048 | MS.gene000153:intron |
| TGAAAACCCTGCCAATCCTA+AGG | 0.544470 | 5.4:+2042706 | MS.gene000153:CDS |
| GAGATATGGAAAGGCACGGA+TGG | 0.545661 | 5.4:+2042824 | MS.gene000153:CDS |
| GATTGCTGATGCAGAAGAGA+AGG | 0.556187 | 5.4:+2042284 | MS.gene000153:CDS |
| GAGAAGGGGCTTATCACACC+TGG | 0.558309 | 5.4:+2042300 | MS.gene000153:CDS |
| CAGGTCCTCACAAGATTCAA+GGG | 0.561138 | 5.4:+2043579 | MS.gene000153:intron |
| GAGTTTATATACCTTAGGAT+TGG | 0.561288 | 5.4:-2042717 | None:intergenic |
| GTGGTACCATAACCGGTGCT+GGG | 0.564241 | 5.4:+2042882 | MS.gene000153:CDS |
| CTGCAATTAAGATAGCCAAA+AGG | 0.568848 | 5.4:+2044464 | MS.gene000153:CDS |
| TTTAAGATATTTCCCAGCAC+CGG | 0.569437 | 5.4:-2042894 | None:intergenic |
| GCCTTCATGGCAGCAGCCAA+GGG | 0.575694 | 5.4:+2042509 | MS.gene000153:CDS |
| ATTGCTGATGCAGAAGAGAA+GGG | 0.577230 | 5.4:+2042285 | MS.gene000153:CDS |
| TGCTATTTGAGTCAGTGAGA+CGG | 0.579355 | 5.4:+2045438 | MS.gene000153:CDS |
| TTGTTGAAGTATGTAGGCAT+TGG | 0.581978 | 5.4:-2042681 | None:intergenic |
| GATTCAGGGCTCGAAAGTCA+TGG | 0.583977 | 5.4:-2045471 | None:intergenic |
| AGATATGGAAAGGCACGGAT+GGG | 0.598941 | 5.4:+2042825 | MS.gene000153:CDS |
| TACCACTTGTTGGTTCAATG+AGG | 0.607547 | 5.4:-2042469 | None:intergenic |
| GTTTCTGGGATAGGTACTGG+TGG | 0.607715 | 5.4:+2042863 | MS.gene000153:CDS |
| TTTCCATATCTCTGGACCGG+TGG | 0.608117 | 5.4:-2042813 | None:intergenic |
| ACTCAAATAGCACAGAGGAT+AGG | 0.611244 | 5.4:-2045427 | None:intergenic |
| AGATTAACTTCTAAGACACC+AGG | 0.618092 | 5.4:-2043620 | None:intergenic |
| TATATACCTTAGGATTGGCA+GGG | 0.625254 | 5.4:-2042712 | None:intergenic |
| TTTGGCTATCTTAATTGCAG+CGG | 0.625545 | 5.4:-2044461 | None:intergenic |
| GAACCAACAAGTGGTAACAC+TGG | 0.632333 | 5.4:+2042476 | MS.gene000153:CDS |
| GTCCTCATTGAACCAACAAG+TGG | 0.633075 | 5.4:+2042467 | MS.gene000153:CDS |
| TAGGTACATTATGAAACCAC+CGG | 0.634628 | 5.4:+2042797 | MS.gene000153:intron |
| TCCAGAGATATGGAAAGGCA+CGG | 0.636334 | 5.4:+2042820 | MS.gene000153:CDS |
| TATCTAAATAGACTTGCAGA+TGG | 0.637010 | 5.4:+2042043 | MS.gene000153:CDS |
| ACCGGTCCAGAGATATGGAA+AGG | 0.637929 | 5.4:+2042815 | MS.gene000153:CDS |
| TCTATTTAGATACACTAATG+GGG | 0.639571 | 5.4:-2042032 | None:intergenic |
| GCTGATTGGTGTGGAACCAG+TGG | 0.641769 | 5.4:+2043057 | MS.gene000153:intron |
| GAGAGTCCAGTGCTCTCAGG+GGG | 0.648364 | 5.4:+2043079 | MS.gene000153:CDS |
| TTGCTGATGCAGAAGAGAAG+GGG | 0.651912 | 5.4:+2042286 | MS.gene000153:CDS |
| CCAATCCCTTGAATCTTGTG+AGG | 0.662558 | 5.4:-2043584 | None:intergenic |
| GATTAACTTCTAAGACACCA+GGG | 0.699313 | 5.4:-2043619 | None:intergenic |
| ATTTGAGTCAGTGAGACGGG+AGG | 0.715909 | 5.4:+2045442 | MS.gene000153:CDS |
| GGAGAGTCCAGTGCTCTCAG+GGG | 0.724433 | 5.4:+2043078 | MS.gene000153:CDS |
| CACTGACTCAAATAGCACAG+AGG | 0.749640 | 5.4:-2045432 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAATTACAATTTTATTTT+CGG | - | chr5.4:2044075-2044094 | None:intergenic | 10.0% |
| !! | ATATCACAATTTAAATGAAA+GGG | - | chr5.4:2043930-2043949 | None:intergenic | 15.0% |
| !! | GATATGAAGATTAAAAATTA+AGG | + | chr5.4:2044843-2044862 | MS.gene000153:intron | 15.0% |
| !! | TATATCACAATTTAAATGAA+AGG | - | chr5.4:2043931-2043950 | None:intergenic | 15.0% |
| !!! | AAAAAAAAATATGCACTTTT+TGG | + | chr5.4:2043277-2043296 | MS.gene000153:intron | 15.0% |
| !!! | AAAAAAAATATGCACTTTTT+GGG | + | chr5.4:2043278-2043297 | MS.gene000153:intron | 15.0% |
| !!! | ATCTCTTTAGTATTTTTTAA+CGG | - | chr5.4:2044764-2044783 | None:intergenic | 15.0% |
| !!! | CATTGATTTTTAAAATTTGT+TGG | + | chr5.4:2043747-2043766 | MS.gene000153:intron | 15.0% |
| !!! | TAAACTTTTATGTATTAATG+TGG | + | chr5.4:2043118-2043137 | MS.gene000153:intron | 15.0% |
| !!! | TTTTAATCTTCATATCAAAA+AGG | - | chr5.4:2044839-2044858 | None:intergenic | 15.0% |
| !! | AAAAAAATTAACTAAAGAGC+TGG | + | chr5.4:2044736-2044755 | MS.gene000153:intron | 20.0% |
| !! | AATACTTCAACTAAAAGTTT+AGG | - | chr5.4:2044533-2044552 | None:intergenic | 20.0% |
| !! | AATATCAAAGTAAAGATGTT+TGG | - | chr5.4:2044406-2044425 | None:intergenic | 20.0% |
| !! | ACATGCAAAACAAATATTAA+TGG | - | chr5.4:2042423-2042442 | None:intergenic | 20.0% |
| !! | ATACTTCAACTAAAAGTTTA+GGG | - | chr5.4:2044532-2044551 | None:intergenic | 20.0% |
| !! | ATATAAACTCATTTGTTCTA+TGG | + | chr5.4:2042730-2042749 | MS.gene000153:intron | 20.0% |
| !! | ATATATATTGTTACCATTGT+AGG | + | chr5.4:2042778-2042797 | MS.gene000153:intron | 20.0% |
| !! | ATCATATCTAAATGTAATAG+TGG | - | chr5.4:2044928-2044947 | None:intergenic | 20.0% |
| !! | ATTTCAGATTAACATCTAAT+CGG | - | chr5.4:2045233-2045252 | None:intergenic | 20.0% |
| !! | CTATTACATTTAGATATGAT+TGG | + | chr5.4:2044928-2044947 | MS.gene000153:intron | 20.0% |
| !! | GATAAAACTAACCTTTATAT+TGG | - | chr5.4:2042930-2042949 | None:intergenic | 20.0% |
| !! | TAAATTGTGATATAAACTTG+AGG | + | chr5.4:2043937-2043956 | MS.gene000153:intron | 20.0% |
| !! | TTAACCATAAATGTGTAATT+TGG | + | chr5.4:2044162-2044181 | MS.gene000153:intron | 20.0% |
| !!! | ATTAATATTTGTTTTGCATG+TGG | + | chr5.4:2042422-2042441 | MS.gene000153:intron | 20.0% |
| !!! | CATACATCACTATTTTTTTA+AGG | - | chr5.4:2043726-2043745 | None:intergenic | 20.0% |
| !!! | CTTTACTTTGATATTTTTGT+AGG | + | chr5.4:2044411-2044430 | MS.gene000153:intron | 20.0% |
| !!! | GATGTTATTTAAGGATAAAA+TGG | + | chr5.4:2043187-2043206 | MS.gene000153:intron | 20.0% |
| !!! | TTAATATTTGTTTTGCATGT+GGG | + | chr5.4:2042423-2042442 | MS.gene000153:intron | 20.0% |
| !!! | TTACAAGTTGATGTTATTTA+AGG | + | chr5.4:2043178-2043197 | MS.gene000153:intron | 20.0% |
| !!! | TTAGATGTTAATCTGAAATA+TGG | + | chr5.4:2045234-2045253 | MS.gene000153:intron | 20.0% |
| ! | AAACTGGAAAAAAGAAATGT+AGG | - | chr5.4:2044374-2044393 | None:intergenic | 25.0% |
| ! | AATCTTGTATAACGAAACAT+CGG | - | chr5.4:2045334-2045353 | None:intergenic | 25.0% |
| ! | AATTGATGTGTTGTATTAGA+AGG | + | chr5.4:2044088-2044107 | MS.gene000153:intron | 25.0% |
| ! | ACAATTAGATGCAAAAACTA+TGG | - | chr5.4:2043817-2043836 | None:intergenic | 25.0% |
| ! | AGAGCAAAATTCCAATATAA+AGG | + | chr5.4:2042916-2042935 | MS.gene000153:CDS | 25.0% |
| ! | AGTCTATTTAGATACACTAA+TGG | - | chr5.4:2042037-2042056 | None:intergenic | 25.0% |
| ! | ATAAAAGTTTATAACTCACC+AGG | - | chr5.4:2043109-2043128 | None:intergenic | 25.0% |
| ! | ATCTTCCTAAGTATATGTTT+GGG | + | chr5.4:2042947-2042966 | MS.gene000153:intron | 25.0% |
| ! | ATGATGACAACATGAAATTA+CGG | + | chr5.4:2044803-2044822 | MS.gene000153:intron | 25.0% |
| ! | ATGTTATATATTTGACATGC+AGG | + | chr5.4:2042247-2042266 | MS.gene000153:intron | 25.0% |
| ! | ATTTAAGGATAAAATGGAAG+AGG | + | chr5.4:2043193-2043212 | MS.gene000153:intron | 25.0% |
| ! | CAAATGAGTTTATATACCTT+AGG | - | chr5.4:2042725-2042744 | None:intergenic | 25.0% |
| ! | CTTTATTGAATTCGAACTTT+CGG | - | chr5.4:2045161-2045180 | None:intergenic | 25.0% |
| ! | GAGAATCTTCTTTCAATATT+TGG | - | chr5.4:2043433-2043452 | None:intergenic | 25.0% |
| ! | GTCTATTTAGATACACTAAT+GGG | - | chr5.4:2042036-2042055 | None:intergenic | 25.0% |
| ! | TAACATAATCGTTAAGCATA+CGG | + | chr5.4:2044588-2044607 | MS.gene000153:intron | 25.0% |
| ! | TAATCTTTGCATTATTCAAG+AGG | + | chr5.4:2043684-2043703 | MS.gene000153:intron | 25.0% |
| ! | TATCTTCCTAAGTATATGTT+TGG | + | chr5.4:2042946-2042965 | MS.gene000153:intron | 25.0% |
| ! | TCTATTTAGATACACTAATG+GGG | - | chr5.4:2042035-2042054 | None:intergenic | 25.0% |
| ! | TGTTTCGTTATACAAGATTA+TGG | + | chr5.4:2045335-2045354 | MS.gene000153:intron | 25.0% |
| ! | TTCAAATTGTTGAAGTATGT+AGG | - | chr5.4:2042690-2042709 | None:intergenic | 25.0% |
| ! | TTCGACAAAGTAGATATTAA+GGG | - | chr5.4:2044299-2044318 | None:intergenic | 25.0% |
| !! | AAGGCTGTAATTTTATGTTT+TGG | - | chr5.4:2045082-2045101 | None:intergenic | 25.0% |
| !! | TAGATAGAAATGTTAGTTTC+CGG | - | chr5.4:2044698-2044717 | None:intergenic | 25.0% |
| !! | TAGGTTTAGAACTTACAAAT+AGG | - | chr5.4:2044244-2044263 | None:intergenic | 25.0% |
| !! | TATATATTGATCAAAGTGTC+AGG | - | chr5.4:2042765-2042784 | None:intergenic | 25.0% |
| !!! | ACTTTGATATTTTTGTAGGT+GGG | + | chr5.4:2044415-2044434 | MS.gene000153:intron | 25.0% |
| !!! | AGAATCATTCTATTAGCTTT+TGG | + | chr5.4:2042578-2042597 | MS.gene000153:CDS | 25.0% |
| !!! | AGTAACTCCTAAAGTTTTTT+AGG | - | chr5.4:2043244-2043263 | None:intergenic | 25.0% |
| !!! | ATCGTTATGAGTATTGATTT+TGG | + | chr5.4:2042144-2042163 | MS.gene000153:intron | 25.0% |
| !!! | CATCACTATTTTTTTAAGGA+TGG | - | chr5.4:2043722-2043741 | None:intergenic | 25.0% |
| !!! | GAACTTTTTTTGTAATTGGT+TGG | + | chr5.4:2044316-2044335 | MS.gene000153:intron | 25.0% |
| !!! | TACTTTGATATTTTTGTAGG+TGG | + | chr5.4:2044414-2044433 | MS.gene000153:intron | 25.0% |
| !!! | TGTCGAACTTTTTTTGTAAT+TGG | + | chr5.4:2044312-2044331 | MS.gene000153:intron | 25.0% |
| !!! | TTACCAATTTTGTCGTTTTA+TGG | - | chr5.4:2044571-2044590 | None:intergenic | 25.0% |
| AAAATTGACGCATTTGTTTC+TGG | + | chr5.4:2042848-2042867 | MS.gene000153:CDS | 30.0% | |
| AAGTAAGCTTAAACAACTTG+TGG | + | chr5.4:2043660-2043679 | MS.gene000153:intron | 30.0% | |
| AGGAAGACCTAAAAAACTTT+AGG | + | chr5.4:2043234-2043253 | MS.gene000153:intron | 30.0% | |
| ATACATTGTTTACCTTGACT+TGG | + | chr5.4:2043859-2043878 | MS.gene000153:intron | 30.0% | |
| ATATATTTGACATGCAGGAT+TGG | + | chr5.4:2042252-2042271 | MS.gene000153:intron | 30.0% | |
| ATCAGACAAGAATACGTTAA+GGG | - | chr5.4:2041984-2042003 | None:intergenic | 30.0% | |
| ATGTTGTCTACAGTTTGATA+AGG | + | chr5.4:2043773-2043792 | MS.gene000153:intron | 30.0% | |
| ATTCAATAAAGAAATGCTGC+AGG | + | chr5.4:2045170-2045189 | MS.gene000153:intron | 30.0% | |
| ATTTCATGTTGTCATCATTG+TGG | - | chr5.4:2044801-2044820 | None:intergenic | 30.0% | |
| GAGTTTATATACCTTAGGAT+TGG | - | chr5.4:2042720-2042739 | None:intergenic | 30.0% | |
| GTTCCATAAAACGACAAAAT+TGG | + | chr5.4:2044565-2044584 | MS.gene000153:intron | 30.0% | |
| GTTCGACAAAGTAGATATTA+AGG | - | chr5.4:2044300-2044319 | None:intergenic | 30.0% | |
| GTTTCATAATGTACCTACAA+TGG | - | chr5.4:2042794-2042813 | None:intergenic | 30.0% | |
| TATCAGACAAGAATACGTTA+AGG | - | chr5.4:2041985-2042004 | None:intergenic | 30.0% | |
| TATCTAAATAGACTTGCAGA+TGG | + | chr5.4:2042043-2042062 | MS.gene000153:CDS | 30.0% | |
| TCTGCCAAATTACACATTTA+TGG | - | chr5.4:2044169-2044188 | None:intergenic | 30.0% | |
| TCTTCTTTCAATATTTGGAC+AGG | - | chr5.4:2043428-2043447 | None:intergenic | 30.0% | |
| TGTTTGGTAAACTACAAAAC+TGG | - | chr5.4:2044390-2044409 | None:intergenic | 30.0% | |
| TTTCTCTTTATGTAGCTGAT+TGG | + | chr5.4:2043043-2043062 | MS.gene000153:intron | 30.0% | |
| ! | AAATTGACGCATTTGTTTCT+GGG | + | chr5.4:2042849-2042868 | MS.gene000153:CDS | 30.0% |
| ! | ACTAGAATTGTGTTTGAGAT+TGG | + | chr5.4:2042191-2042210 | MS.gene000153:intron | 30.0% |
| ! | AGATAGAAATGTTAGTTTCC+GGG | - | chr5.4:2044697-2044716 | None:intergenic | 30.0% |
| !! | AATATGCACTTCTCTGAAAT+TGG | + | chr5.4:2043322-2043341 | MS.gene000153:intron | 30.0% |
| !! | AGTAGTATTTTGCCACTTAT+TGG | + | chr5.4:2043886-2043905 | MS.gene000153:intron | 30.0% |
| !! | ATATGCACTTCTCTGAAATT+GGG | + | chr5.4:2043323-2043342 | MS.gene000153:intron | 30.0% |
| !! | GTTAATGTTCCATTTTGACA+TGG | + | chr5.4:2045370-2045389 | MS.gene000153:intron | 30.0% |
| AAATGAAAGGGTTCTCAAAC+TGG | - | chr5.4:2043918-2043937 | None:intergenic | 35.0% | |
| AAGCTTCTTGCTCTTAAAGA+AGG | + | chr5.4:2044218-2044237 | MS.gene000153:CDS | 35.0% | |
| AATTATGAGCTTGTATCCCT+TGG | - | chr5.4:2042528-2042547 | None:intergenic | 35.0% | |
| ACTCATTTGTTCTATGGCAA+TGG | + | chr5.4:2042736-2042755 | MS.gene000153:intron | 35.0% | |
| AGTCATGCCATCAATGAATT+CGG | + | chr5.4:2044959-2044978 | MS.gene000153:intron | 35.0% | |
| ATACTACTTCAACCAAGTCA+AGG | - | chr5.4:2043874-2043893 | None:intergenic | 35.0% | |
| ATGGAAGAGGATCTGATTAA+AGG | + | chr5.4:2043206-2043225 | MS.gene000153:intron | 35.0% | |
| ATTTGTGCTGTGTAGTTGAT+TGG | + | chr5.4:2042004-2042023 | MS.gene000153:intron | 35.0% | |
| CCATAGAAAAAGCTATAAGC+TGG | + | chr5.4:2043377-2043396 | MS.gene000153:intron | 35.0% | |
| CTCTTGACTTTGTAAATGTG+TGG | + | chr5.4:2045119-2045138 | MS.gene000153:intron | 35.0% | |
| CTGAGCTAAAAAATAGCGAT+CGG | - | chr5.4:2041956-2041975 | None:intergenic | 35.0% | |
| CTGCAATTAAGATAGCCAAA+AGG | + | chr5.4:2044464-2044483 | MS.gene000153:CDS | 35.0% | |
| CTTGTCCCAAACATATACTT+AGG | - | chr5.4:2042955-2042974 | None:intergenic | 35.0% | |
| GTGCATTCTATGAAATGTTG+TGG | + | chr5.4:2042370-2042389 | MS.gene000153:intron | 35.0% | |
| TAGGTACATTATGAAACCAC+CGG | + | chr5.4:2042797-2042816 | MS.gene000153:intron | 35.0% | |
| TATTGAATTCGAACTTTCGG+TGG | - | chr5.4:2045158-2045177 | None:intergenic | 35.0% | |
| TGGAAGAGGATCTGATTAAA+GGG | + | chr5.4:2043207-2043226 | MS.gene000153:intron | 35.0% | |
| TGTCTACAGTTTGATAAGGT+GGG | + | chr5.4:2043777-2043796 | MS.gene000153:intron | 35.0% | |
| TGTTGAAGTATGTAGGCATT+GGG | - | chr5.4:2042683-2042702 | None:intergenic | 35.0% | |
| TTCGTGATTATGTGCTTGTT+TGG | + | chr5.4:2042216-2042235 | MS.gene000153:intron | 35.0% | |
| TTGTCTACAGTTTGATAAGG+TGG | + | chr5.4:2043776-2043795 | MS.gene000153:intron | 35.0% | |
| TTGTTGAAGTATGTAGGCAT+TGG | - | chr5.4:2042684-2042703 | None:intergenic | 35.0% | |
| TTTAAGAGCAAGAAGCTTTG+CGG | - | chr5.4:2044216-2044235 | None:intergenic | 35.0% | |
| TTTGGCTATCTTAATTGCAG+CGG | - | chr5.4:2044464-2044483 | None:intergenic | 35.0% | |
| ! | ATAAGCTTCCCAGAATTTTC+TGG | - | chr5.4:2044490-2044509 | None:intergenic | 35.0% |
| ! | GATAGAAATGTTAGTTTCCG+GGG | - | chr5.4:2044696-2044715 | None:intergenic | 35.0% |
| ! | GATTAGTCAAAGGATCAGTT+AGG | - | chr5.4:2043533-2043552 | None:intergenic | 35.0% |
| ! | GGTGTCGAGAAAAATTTACA+AGG | - | chr5.4:2043493-2043512 | None:intergenic | 35.0% |
| ! | TATATACCTTAGGATTGGCA+GGG | - | chr5.4:2042715-2042734 | None:intergenic | 35.0% |
| ! | TTATATACCTTAGGATTGGC+AGG | - | chr5.4:2042716-2042735 | None:intergenic | 35.0% |
| ! | TTTAAGATATTTCCCAGCAC+CGG | - | chr5.4:2042897-2042916 | None:intergenic | 35.0% |
| !! | AAGTTTTGTGTTCCTTGATG+CGG | + | chr5.4:2041925-2041944 | MS.gene000153:intron | 35.0% |
| !! | ACTCTTAGCTGTTTCTACAT+AGG | - | chr5.4:2044263-2044282 | None:intergenic | 35.0% |
| !! | AGATTAACTTCTAAGACACC+AGG | - | chr5.4:2043623-2043642 | None:intergenic | 35.0% |
| !! | CCAGCTTATAGCTTTTTCTA+TGG | - | chr5.4:2043380-2043399 | None:intergenic | 35.0% |
| !! | GATTAACTTCTAAGACACCA+GGG | - | chr5.4:2043622-2043641 | None:intergenic | 35.0% |
| !!! | ATTAGCTTTTGGAGCTGAAT+TGG | + | chr5.4:2042589-2042608 | MS.gene000153:CDS | 35.0% |
| !!! | CAAAAGTGCTTTTAAGAGCA+AGG | - | chr5.4:2044027-2044046 | None:intergenic | 35.0% |
| AAAGTTATACCAACCTGTCC+AGG | - | chr5.4:2042321-2042340 | None:intergenic | 40.0% | |
| AACTGGAAATGGCCAATAAG+TGG | - | chr5.4:2043901-2043920 | None:intergenic | 40.0% | |
| AAGGGTTCTCAAACTGGAAA+TGG | - | chr5.4:2043912-2043931 | None:intergenic | 40.0% | |
| ACTCAAATAGCACAGAGGAT+AGG | - | chr5.4:2045430-2045449 | None:intergenic | 40.0% | |
| AGCTTGAAGTTGTTGGATCA+AGG | - | chr5.4:2045101-2045120 | None:intergenic | 40.0% | |
| AGGACATCCGAATTCATTGA+TGG | - | chr5.4:2044969-2044988 | None:intergenic | 40.0% | |
| AGTCAAGAGCTTGAAGTTGT+TGG | - | chr5.4:2045108-2045127 | None:intergenic | 40.0% | |
| ATAAGCTGGAAAGACTGTGT+TGG | + | chr5.4:2043391-2043410 | MS.gene000153:intron | 40.0% | |
| ATTGCTGATGCAGAAGAGAA+GGG | + | chr5.4:2042285-2042304 | MS.gene000153:CDS | 40.0% | |
| CAATAAAGAAATGCTGCAGG+TGG | + | chr5.4:2045173-2045192 | MS.gene000153:intron | 40.0% | |
| CATGCTCTAGTGTAAAAGAC+AGG | + | chr5.4:2042107-2042126 | MS.gene000153:CDS | 40.0% | |
| CCAAAAGGCCAGAAAATTCT+GGG | + | chr5.4:2044479-2044498 | MS.gene000153:CDS | 40.0% | |
| CTTTATGTAGCTGATTGGTG+TGG | + | chr5.4:2043048-2043067 | MS.gene000153:intron | 40.0% | |
| CTTTCAAGACTCATTGAAGC+AGG | - | chr5.4:2042557-2042576 | None:intergenic | 40.0% | |
| CTTTCAATATTTGGACAGGC+AGG | - | chr5.4:2043424-2043443 | None:intergenic | 40.0% | |
| GGAAGAGGATCTGATTAAAG+GGG | + | chr5.4:2043208-2043227 | MS.gene000153:intron | 40.0% | |
| TAAGCTGGAAAGACTGTGTT+GGG | + | chr5.4:2043392-2043411 | MS.gene000153:intron | 40.0% | |
| TAGGTCAACCGATCATGAAA+TGG | - | chr5.4:2043514-2043533 | None:intergenic | 40.0% | |
| TCAAAAAGCTGAAGAGCTGT+TGG | + | chr5.4:2042649-2042668 | MS.gene000153:CDS | 40.0% | |
| TCCTACTCGAAACTTTCCTA+GGG | - | chr5.4:2043986-2044005 | None:intergenic | 40.0% | |
| TCTCGACACCATTTCATGAT+CGG | + | chr5.4:2043503-2043522 | MS.gene000153:intron | 40.0% | |
| TGCTGCAAAACTGGAATTGA+TGG | + | chr5.4:2042081-2042100 | MS.gene000153:CDS | 40.0% | |
| TTAGCCAGTTCTTAAGCTAC+AGG | - | chr5.4:2045261-2045280 | None:intergenic | 40.0% | |
| TTGTAGGTGGGAATATCTTC+TGG | + | chr5.4:2044427-2044446 | MS.gene000153:intron | 40.0% | |
| TTTAAGAGCAAGGAGCAAAC+TGG | - | chr5.4:2044017-2044036 | None:intergenic | 40.0% | |
| ! | AAGGATCGGTGATTAGTCAA+AGG | - | chr5.4:2043543-2043562 | None:intergenic | 40.0% |
| ! | ATCTAATCGGTTCCATTAGC+GGG | - | chr5.4:2045220-2045239 | None:intergenic | 40.0% |
| ! | ATTCCAGTTTTGCAGCAACT+CGG | - | chr5.4:2042078-2042097 | None:intergenic | 40.0% |
| ! | CATCTAATCGGTTCCATTAG+CGG | - | chr5.4:2045221-2045240 | None:intergenic | 40.0% |
| ! | CTGTCTTTTACACTAGAGCA+TGG | - | chr5.4:2042109-2042128 | None:intergenic | 40.0% |
| ! | TAAGGGACGTTCAAGGATTT+TGG | + | chr5.4:2044651-2044670 | MS.gene000153:intron | 40.0% |
| ! | TGCTATTTGAGTCAGTGAGA+CGG | + | chr5.4:2045438-2045457 | MS.gene000153:CDS | 40.0% |
| !! | ACTTCTCTGAAATTGGGTCA+TGG | + | chr5.4:2043329-2043348 | MS.gene000153:intron | 40.0% |
| !! | TACCACTTGTTGGTTCAATG+AGG | - | chr5.4:2042472-2042491 | None:intergenic | 40.0% |
| !! | TGGTTGGTAATGTGATCTGA+GGG | + | chr5.4:2044332-2044351 | MS.gene000153:intron | 40.0% |
| !! | TTGGTTGGTAATGTGATCTG+AGG | + | chr5.4:2044331-2044350 | MS.gene000153:intron | 40.0% |
| !! | TTTGTTTCTGGGATAGGTAC+TGG | + | chr5.4:2042860-2042879 | MS.gene000153:CDS | 40.0% |
| AAGAAATGCTGCAGGTGGTA+TGG | + | chr5.4:2045178-2045197 | MS.gene000153:intron | 45.0% | |
| ACAAGTGGTAACACTGGCAT+TGG | + | chr5.4:2042482-2042501 | MS.gene000153:CDS | 45.0% | |
| ATGCCAGTGTTACCACTTGT+TGG | - | chr5.4:2042482-2042501 | None:intergenic | 45.0% | |
| ATTCCACATAGTTGGCAGCT+TGG | + | chr5.4:2044999-2045018 | MS.gene000153:intron | 45.0% | |
| CAACTATGTGGAATCTCAGG+CGG | - | chr5.4:2044993-2045012 | None:intergenic | 45.0% | |
| CAGGTCCTCACAAGATTCAA+GGG | + | chr5.4:2043579-2043598 | MS.gene000153:intron | 45.0% | |
| CATTCACAGCAGCAAAGGAT+CGG | - | chr5.4:2043557-2043576 | None:intergenic | 45.0% | |
| CCAATCCCTTGAATCTTGTG+AGG | - | chr5.4:2043587-2043606 | None:intergenic | 45.0% | |
| CCTCACAAGATTCAAGGGAT+TGG | + | chr5.4:2043584-2043603 | MS.gene000153:CDS | 45.0% | |
| CTATGCTTATCCTCTTCCCT+AGG | + | chr5.4:2043967-2043986 | MS.gene000153:intron | 45.0% | |
| CTCCTACTCGAAACTTTCCT+AGG | - | chr5.4:2043987-2044006 | None:intergenic | 45.0% | |
| CTCCTTTCATTCCCTTTGCA+GGG | - | chr5.4:2042625-2042644 | None:intergenic | 45.0% | |
| CTGAACATTCACAGCAGCAA+AGG | - | chr5.4:2043562-2043581 | None:intergenic | 45.0% | |
| CTTTGCTGCTGTGAATGTTC+AGG | + | chr5.4:2043560-2043579 | MS.gene000153:intron | 45.0% | |
| GAACCAACAAGTGGTAACAC+TGG | + | chr5.4:2042476-2042495 | MS.gene000153:CDS | 45.0% | |
| GATTGCTGATGCAGAAGAGA+AGG | + | chr5.4:2042284-2042303 | MS.gene000153:CDS | 45.0% | |
| GCCAAAAGGCCAGAAAATTC+TGG | + | chr5.4:2044478-2044497 | MS.gene000153:CDS | 45.0% | |
| GCTATTTGAGTCAGTGAGAC+GGG | + | chr5.4:2045439-2045458 | MS.gene000153:CDS | 45.0% | |
| GTACCTTAAGAACCCGCTAA+TGG | + | chr5.4:2045205-2045224 | MS.gene000153:intron | 45.0% | |
| GTCCTCATTGAACCAACAAG+TGG | + | chr5.4:2042467-2042486 | MS.gene000153:CDS | 45.0% | |
| TCAGGTCCTCACAAGATTCA+AGG | + | chr5.4:2043578-2043597 | MS.gene000153:intron | 45.0% | |
| TCCAGAGATATGGAAAGGCA+CGG | + | chr5.4:2042820-2042839 | MS.gene000153:CDS | 45.0% | |
| TCGAAACTTTCCTAGGGAAG+AGG | - | chr5.4:2043980-2043999 | None:intergenic | 45.0% | |
| TGAAAACCCTGCCAATCCTA+AGG | + | chr5.4:2042706-2042725 | MS.gene000153:CDS | 45.0% | |
| TGCCAACTATGTGGAATCTC+AGG | - | chr5.4:2044996-2045015 | None:intergenic | 45.0% | |
| TGGTCCTGTAGCTTAAGAAC+TGG | + | chr5.4:2045254-2045273 | MS.gene000153:intron | 45.0% | |
| TTGCTGATGCAGAAGAGAAG+GGG | + | chr5.4:2042286-2042305 | MS.gene000153:CDS | 45.0% | |
| ! | AAGATTCAAGGGATTGGTGC+TGG | + | chr5.4:2043590-2043609 | MS.gene000153:CDS | 45.0% |
| ! | AGATATGGAAAGGCACGGAT+GGG | + | chr5.4:2042825-2042844 | MS.gene000153:CDS | 45.0% |
| ! | TAGGTAGCTTGGTGAGCTAA+GGG | + | chr5.4:2044634-2044653 | MS.gene000153:intron | 45.0% |
| ! | TCCCTAGGAAAGTTTCGAGT+AGG | + | chr5.4:2043982-2044001 | MS.gene000153:intron | 45.0% |
| ! | TTCCAGTTTTGCAGCAACTC+GGG | - | chr5.4:2042077-2042096 | None:intergenic | 45.0% |
| !! | ACGTTCAAGGATTTTGGAGG+AGG | + | chr5.4:2044657-2044676 | MS.gene000153:intron | 45.0% |
| !! | ATATTTCCCAGCACCGGTTA+TGG | - | chr5.4:2042891-2042910 | None:intergenic | 45.0% |
| !! | CACTGACTCAAATAGCACAG+AGG | - | chr5.4:2045435-2045454 | None:intergenic | 45.0% |
| !! | CCCAGAATTTTCTGGCCTTT+TGG | - | chr5.4:2044482-2044501 | None:intergenic | 45.0% |
| !! | GACGCATTTGTTTCTGGGAT+AGG | + | chr5.4:2042854-2042873 | MS.gene000153:CDS | 45.0% |
| !! | GGTTGGTAATGTGATCTGAG+GGG | + | chr5.4:2044333-2044352 | MS.gene000153:intron | 45.0% |
| !! | GTTCCATTAGCGGGTTCTTA+AGG | - | chr5.4:2045211-2045230 | None:intergenic | 45.0% |
| !! | GTTCCATTTTGACATGGTGC+AGG | + | chr5.4:2045376-2045395 | MS.gene000153:intron | 45.0% |
| !! | GTTTTGACAGACCCTGCAAA+GGG | + | chr5.4:2042611-2042630 | MS.gene000153:CDS | 45.0% |
| !! | TGGCATTGGATTAGCCTTCA+TGG | + | chr5.4:2042496-2042515 | MS.gene000153:CDS | 45.0% |
| !! | TTTTTCCAAGCTTTGGCGAG+AGG | + | chr5.4:2045402-2045421 | MS.gene000153:CDS | 45.0% |
| !!! | CAGGTCGTTTTTCCAAGCTT+TGG | + | chr5.4:2045395-2045414 | MS.gene000153:intron | 45.0% |
| !!! | TTAGTTAATTTTTTTTTAAT+AGG | - | chr5.4:2044731-2044750 | None:intergenic | 5.0% |
| AAACCACCGGTCCAGAGATA+TGG | + | chr5.4:2042810-2042829 | MS.gene000153:CDS | 50.0% | |
| ACCGGTCCAGAGATATGGAA+AGG | + | chr5.4:2042815-2042834 | MS.gene000153:CDS | 50.0% | |
| AGTTTCCGGGGATGAAACCT+GGG | - | chr5.4:2044684-2044703 | None:intergenic | 50.0% | |
| ATGAAGAGCTAGTCCCACGT+AGG | + | chr5.4:2044615-2044634 | MS.gene000153:intron | 50.0% | |
| ATTTGAGTCAGTGAGACGGG+AGG | + | chr5.4:2045442-2045461 | MS.gene000153:CDS | 50.0% | |
| CGACCTGCACCATGTCAAAA+TGG | - | chr5.4:2045382-2045401 | None:intergenic | 50.0% | |
| CGATCGGAAAATCCGCATCA+AGG | - | chr5.4:2041940-2041959 | None:intergenic | 50.0% | |
| CGCCTGAGATTCCACATAGT+TGG | + | chr5.4:2044991-2045010 | MS.gene000153:intron | 50.0% | |
| CTTATCACACCTGGACAGGT+TGG | + | chr5.4:2042309-2042328 | MS.gene000153:intron | 50.0% | |
| GACCCTGCAAAGGGAATGAA+AGG | + | chr5.4:2042620-2042639 | MS.gene000153:CDS | 50.0% | |
| GCCTTTCCATATCTCTGGAC+CGG | - | chr5.4:2042819-2042838 | None:intergenic | 50.0% | |
| GCTCCTTTCATTCCCTTTGC+AGG | - | chr5.4:2042626-2042645 | None:intergenic | 50.0% | |
| GGATCTGATTAAAGGGGCAG+AGG | + | chr5.4:2043214-2043233 | MS.gene000153:intron | 50.0% | |
| TAGTTTCCGGGGATGAAACC+TGG | - | chr5.4:2044685-2044704 | None:intergenic | 50.0% | |
| TATGTGGAATCTCAGGCGGT+AGG | - | chr5.4:2044989-2045008 | None:intergenic | 50.0% | |
| TCCGTGCCTTTCCATATCTC+TGG | - | chr5.4:2042824-2042843 | None:intergenic | 50.0% | |
| TTTCCATATCTCTGGACCGG+TGG | - | chr5.4:2042816-2042835 | None:intergenic | 50.0% | |
| ! | GAGATATGGAAAGGCACGGA+TGG | + | chr5.4:2042824-2042843 | MS.gene000153:CDS | 50.0% |
| ! | GGGACGTTCAAGGATTTTGG+AGG | + | chr5.4:2044654-2044673 | MS.gene000153:intron | 50.0% |
| ! | GTAGGTAGCTTGGTGAGCTA+AGG | + | chr5.4:2044633-2044652 | MS.gene000153:intron | 50.0% |
| !! | GGTACTGGTGGTACCATAAC+CGG | + | chr5.4:2042875-2042894 | MS.gene000153:CDS | 50.0% |
| !! | GGTTTTGACAGACCCTGCAA+AGG | + | chr5.4:2042610-2042629 | MS.gene000153:CDS | 50.0% |
| !! | GTTTCTGGGATAGGTACTGG+TGG | + | chr5.4:2042863-2042882 | MS.gene000153:CDS | 50.0% |
| AGCTCACCAAGCTACCTACG+TGG | - | chr5.4:2044632-2044651 | None:intergenic | 55.0% | |
| AGGTACCTCTCGCCAAAGCT+TGG | - | chr5.4:2045410-2045429 | None:intergenic | 55.0% | |
| AGTTGGCAGCTTGGAGCTGT+TGG | + | chr5.4:2045008-2045027 | MS.gene000153:intron | 55.0% | |
| CTAGTCCCACGTAGGTAGCT+TGG | + | chr5.4:2044623-2044642 | MS.gene000153:intron | 55.0% | |
| GAGAAGGGGCTTATCACACC+TGG | + | chr5.4:2042300-2042319 | MS.gene000153:CDS | 55.0% | |
| GCTCACCAAGCTACCTACGT+GGG | - | chr5.4:2044631-2044650 | None:intergenic | 55.0% | |
| GCTCCAAGCTGCCAACTATG+TGG | - | chr5.4:2045005-2045024 | None:intergenic | 55.0% | |
| GCTGATTGGTGTGGAACCAG+TGG | + | chr5.4:2043057-2043076 | MS.gene000153:intron | 55.0% | |
| GGTGAGCTAAGGGACGTTCA+AGG | + | chr5.4:2044644-2044663 | MS.gene000153:intron | 55.0% | |
| GTGGTACCATAACCGGTGCT+GGG | + | chr5.4:2042882-2042901 | MS.gene000153:CDS | 55.0% | |
| TGCCCGAGTTGCTGCAAAAC+TGG | + | chr5.4:2042072-2042091 | MS.gene000153:CDS | 55.0% | |
| TGGAGAGTCCAGTGCTCTCA+GGG | + | chr5.4:2043077-2043096 | MS.gene000153:CDS | 55.0% | |
| !! | AGGATTTTGGAGGAGGTCCC+AGG | + | chr5.4:2044664-2044683 | MS.gene000153:intron | 55.0% |
| !! | ATTGGTGCTGGCTTTGTCCC+TGG | + | chr5.4:2043602-2043621 | MS.gene000153:CDS | 55.0% |
| AGCCTTCATGGCAGCAGCCA+AGG | + | chr5.4:2042508-2042527 | MS.gene000153:CDS | 60.0% | |
| GAGAGTCCAGTGCTCTCAGG+GGG | + | chr5.4:2043079-2043098 | MS.gene000153:CDS | 60.0% | |
| GAGGTCCCAGGTTTCATCCC+CGG | + | chr5.4:2044676-2044695 | MS.gene000153:intron | 60.0% | |
| GCCTTCATGGCAGCAGCCAA+GGG | + | chr5.4:2042509-2042528 | MS.gene000153:CDS | 60.0% | |
| GGAGAGTCCAGTGCTCTCAG+GGG | + | chr5.4:2043078-2043097 | MS.gene000153:CDS | 60.0% | |
| GGGGCTTATCACACCTGGAC+AGG | + | chr5.4:2042305-2042324 | MS.gene000153:CDS | 60.0% | |
| GGTGGTACCATAACCGGTGC+TGG | + | chr5.4:2042881-2042900 | MS.gene000153:CDS | 60.0% | |
| GTGCTCTCAGGGGGAAAACC+TGG | + | chr5.4:2043088-2043107 | MS.gene000153:CDS | 60.0% | |
| GTGGAGAGTCCAGTGCTCTC+AGG | + | chr5.4:2043076-2043095 | MS.gene000153:CDS | 60.0% | |
| TCCCTTGGCTGCTGCCATGA+AGG | - | chr5.4:2042513-2042532 | None:intergenic | 60.0% | |
| !! | GAGAGCACTGGACTCTCCAC+TGG | - | chr5.4:2043076-2043095 | None:intergenic | 60.0% |
| !! | GGTTTTCCCCCTGAGAGCAC+TGG | - | chr5.4:2043088-2043107 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 2041881 | 2045490 | 2041881 | ID=MS.gene000153 |
| chr5.4 | mRNA | 2041881 | 2045490 | 2041881 | ID=MS.gene000153.t1;Parent=MS.gene000153 |
| chr5.4 | exon | 2041881 | 2041922 | 2041881 | ID=MS.gene000153.t1.exon1;Parent=MS.gene000153.t1 |
| chr5.4 | CDS | 2041881 | 2041922 | 2041881 | ID=cds.MS.gene000153.t1;Parent=MS.gene000153.t1 |
| chr5.4 | exon | 2042019 | 2042128 | 2042019 | ID=MS.gene000153.t1.exon2;Parent=MS.gene000153.t1 |
| chr5.4 | CDS | 2042019 | 2042128 | 2042019 | ID=cds.MS.gene000153.t1;Parent=MS.gene000153.t1 |
| chr5.4 | exon | 2042269 | 2042326 | 2042269 | ID=MS.gene000153.t1.exon3;Parent=MS.gene000153.t1 |
| chr5.4 | CDS | 2042269 | 2042326 | 2042269 | ID=cds.MS.gene000153.t1;Parent=MS.gene000153.t1 |
| chr5.4 | exon | 2042464 | 2042727 | 2042464 | ID=MS.gene000153.t1.exon4;Parent=MS.gene000153.t1 |
| chr5.4 | CDS | 2042464 | 2042727 | 2042464 | ID=cds.MS.gene000153.t1;Parent=MS.gene000153.t1 |
| chr5.4 | exon | 2042800 | 2042937 | 2042800 | ID=MS.gene000153.t1.exon5;Parent=MS.gene000153.t1 |
| chr5.4 | CDS | 2042800 | 2042937 | 2042800 | ID=cds.MS.gene000153.t1;Parent=MS.gene000153.t1 |
| chr5.4 | exon | 2043058 | 2043109 | 2043058 | ID=MS.gene000153.t1.exon6;Parent=MS.gene000153.t1 |
| chr5.4 | CDS | 2043058 | 2043109 | 2043058 | ID=cds.MS.gene000153.t1;Parent=MS.gene000153.t1 |
| chr5.4 | exon | 2043582 | 2043661 | 2043582 | ID=MS.gene000153.t1.exon7;Parent=MS.gene000153.t1 |
| chr5.4 | CDS | 2043582 | 2043661 | 2043582 | ID=cds.MS.gene000153.t1;Parent=MS.gene000153.t1 |
| chr5.4 | exon | 2044188 | 2044247 | 2044188 | ID=MS.gene000153.t1.exon8;Parent=MS.gene000153.t1 |
| chr5.4 | CDS | 2044188 | 2044247 | 2044188 | ID=cds.MS.gene000153.t1;Parent=MS.gene000153.t1 |
| chr5.4 | exon | 2044433 | 2044513 | 2044433 | ID=MS.gene000153.t1.exon9;Parent=MS.gene000153.t1 |
| chr5.4 | CDS | 2044433 | 2044513 | 2044433 | ID=cds.MS.gene000153.t1;Parent=MS.gene000153.t1 |
| chr5.4 | exon | 2045398 | 2045490 | 2045398 | ID=MS.gene000153.t1.exon10;Parent=MS.gene000153.t1 |
| chr5.4 | CDS | 2045398 | 2045490 | 2045398 | ID=cds.MS.gene000153.t1;Parent=MS.gene000153.t1 |
| Gene Sequence |
| Protein sequence |
