Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058651.t1 | AQZ26214.1 | 100 | 379 | 0 | 0 | 1 | 379 | 1 | 379 | 9.10E-192 | 679.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058651.t1 | Q1KLZ2 | 89.1 | 340 | 37 | 0 | 40 | 379 | 35 | 374 | 1.9e-174 | 613.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058651.t1 | A0A1U9XPL9 | 100.0 | 379 | 0 | 0 | 1 | 379 | 1 | 379 | 6.5e-192 | 679.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054826 | MS.gene058651 | 0.870095 | 1.89E-66 | -1.69E-46 |
| MS.gene058650 | MS.gene058651 | 0.951749 | 1.06E-109 | -1.69E-46 |
| MS.gene058651 | MS.gene063498 | 0.805178 | 1.51E-49 | -1.69E-46 |
| MS.gene058651 | MS.gene065164 | 0.804908 | 1.72E-49 | -1.69E-46 |
| MS.gene058651 | MS.gene066009 | 0.818781 | 1.64E-52 | -1.69E-46 |
| MS.gene058651 | MS.gene066921 | 0.800723 | 1.26E-48 | -1.69E-46 |
| MS.gene058651 | MS.gene071700 | 0.806699 | 7.25E-50 | -1.69E-46 |
| MS.gene058651 | MS.gene25967 | 0.838248 | 3.22E-57 | -1.69E-46 |
| MS.gene058651 | MS.gene25968 | 0.854078 | 1.56E-61 | -1.69E-46 |
| MS.gene058651 | MS.gene29359 | 0.84064 | 7.70E-58 | -1.69E-46 |
| MS.gene058651 | MS.gene29360 | 0.833472 | 5.23E-56 | -1.69E-46 |
| MS.gene058651 | MS.gene33130 | 0.814856 | 1.24E-51 | -1.69E-46 |
| MS.gene058651 | MS.gene49610 | 0.803583 | 3.25E-49 | -1.69E-46 |
| MS.gene058651 | MS.gene52446 | 0.989492 | 2.35E-178 | -1.69E-46 |
| MS.gene058651 | MS.gene52873 | 0.836627 | 8.38E-57 | -1.69E-46 |
| MS.gene058651 | MS.gene52997 | 0.80462 | 1.98E-49 | -1.69E-46 |
| MS.gene058651 | MS.gene58518 | 0.804244 | 2.37E-49 | -1.69E-46 |
| MS.gene058651 | MS.gene65033 | 0.801952 | 7.06E-49 | -1.69E-46 |
| MS.gene058651 | MS.gene67306 | 0.809444 | 1.89E-50 | -1.69E-46 |
| MS.gene058651 | MS.gene70630 | 0.840431 | 8.73E-58 | -1.69E-46 |
| MS.gene058651 | MS.gene89675 | 0.80239 | 5.74E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33576 | MS.gene058651 | PPI |
| MS.gene69913 | MS.gene058651 | PPI |
| MS.gene80045 | MS.gene058651 | PPI |
| MS.gene92293 | MS.gene058651 | PPI |
| MS.gene44030 | MS.gene058651 | PPI |
| MS.gene058651 | MS.gene000153 | PPI |
| MS.gene058651 | MS.gene005160 | PPI |
| MS.gene058651 | MS.gene024871 | PPI |
| MS.gene058651 | MS.gene21844 | PPI |
| MS.gene058651 | MS.gene70799 | PPI |
| MS.gene058651 | MS.gene006455 | PPI |
| MS.gene26887 | MS.gene058651 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058651.t1 | MTR_7g078070 | 99.211 | 380 | 2 | 1 | 1 | 379 | 1 | 380 | 0.0 | 773 |
| MS.gene058651.t1 | MTR_7g078070 | 99.681 | 313 | 1 | 0 | 67 | 379 | 8 | 320 | 0.0 | 644 |
| MS.gene058651.t1 | MTR_7g078070 | 99.652 | 287 | 1 | 0 | 93 | 379 | 1 | 287 | 0.0 | 590 |
| MS.gene058651.t1 | MTR_4g087490 | 56.583 | 357 | 143 | 4 | 21 | 375 | 16 | 362 | 9.16e-145 | 415 |
| MS.gene058651.t1 | MTR_1g081610 | 62.975 | 316 | 117 | 0 | 58 | 373 | 6 | 321 | 5.08e-137 | 394 |
| MS.gene058651.t1 | MTR_5g006340 | 62.025 | 316 | 120 | 0 | 58 | 373 | 6 | 321 | 8.59e-137 | 393 |
| MS.gene058651.t1 | MTR_1g081625 | 61.321 | 318 | 123 | 0 | 56 | 373 | 3 | 320 | 1.20e-135 | 390 |
| MS.gene058651.t1 | MTR_1g081620 | 61.465 | 314 | 121 | 0 | 60 | 373 | 7 | 320 | 2.91e-135 | 389 |
| MS.gene058651.t1 | MTR_1g103690 | 61.709 | 316 | 121 | 0 | 58 | 373 | 6 | 321 | 3.97e-134 | 386 |
| MS.gene058651.t1 | MTR_4g087510 | 56.782 | 317 | 128 | 2 | 59 | 375 | 46 | 353 | 1.21e-132 | 384 |
| MS.gene058651.t1 | MTR_4g087520 | 63.433 | 268 | 98 | 0 | 108 | 375 | 1 | 268 | 6.43e-117 | 340 |
| MS.gene058651.t1 | MTR_7g087110 | 50.578 | 346 | 157 | 3 | 28 | 373 | 37 | 368 | 2.81e-115 | 340 |
| MS.gene058651.t1 | MTR_1g081640 | 58.363 | 281 | 117 | 0 | 55 | 335 | 2 | 282 | 8.62e-112 | 329 |
| MS.gene058651.t1 | MTR_5g095670 | 29.226 | 349 | 188 | 6 | 68 | 359 | 52 | 398 | 4.15e-38 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene058651.t1 | AT3G61440 | 80.398 | 352 | 65 | 1 | 28 | 379 | 21 | 368 | 0.0 | 575 |
| MS.gene058651.t1 | AT3G61440 | 79.392 | 296 | 57 | 1 | 28 | 323 | 21 | 312 | 1.14e-169 | 477 |
| MS.gene058651.t1 | AT3G61440 | 84.559 | 272 | 42 | 0 | 108 | 379 | 1 | 272 | 2.13e-166 | 466 |
| MS.gene058651.t1 | AT3G61440 | 85.020 | 247 | 37 | 0 | 133 | 379 | 1 | 247 | 4.38e-151 | 426 |
| MS.gene058651.t1 | AT3G59760 | 60.870 | 322 | 126 | 0 | 57 | 378 | 110 | 431 | 9.02e-140 | 405 |
| MS.gene058651.t1 | AT3G59760 | 61.129 | 319 | 124 | 0 | 57 | 375 | 110 | 428 | 9.51e-140 | 405 |
| MS.gene058651.t1 | AT4G14880 | 61.076 | 316 | 123 | 0 | 58 | 373 | 3 | 318 | 9.24e-137 | 393 |
| MS.gene058651.t1 | AT4G14880 | 61.076 | 316 | 123 | 0 | 58 | 373 | 3 | 318 | 9.24e-137 | 393 |
| MS.gene058651.t1 | AT4G14880 | 61.076 | 316 | 123 | 0 | 58 | 373 | 3 | 318 | 9.24e-137 | 393 |
| MS.gene058651.t1 | AT4G14880 | 61.076 | 316 | 123 | 0 | 58 | 373 | 3 | 318 | 9.24e-137 | 393 |
| MS.gene058651.t1 | AT4G14880 | 61.076 | 316 | 123 | 0 | 58 | 373 | 3 | 318 | 9.24e-137 | 393 |
| MS.gene058651.t1 | AT2G43750 | 59.561 | 319 | 129 | 0 | 57 | 375 | 72 | 390 | 4.79e-136 | 394 |
| MS.gene058651.t1 | AT2G43750 | 59.561 | 319 | 129 | 0 | 57 | 375 | 72 | 390 | 4.79e-136 | 394 |
| MS.gene058651.t1 | AT3G59760 | 60.690 | 290 | 114 | 0 | 57 | 346 | 110 | 399 | 1.18e-123 | 363 |
| MS.gene058651.t1 | AT3G04940 | 56.646 | 316 | 137 | 0 | 58 | 373 | 6 | 321 | 5.71e-123 | 358 |
| MS.gene058651.t1 | AT3G04940 | 56.646 | 316 | 137 | 0 | 58 | 373 | 6 | 321 | 5.71e-123 | 358 |
| MS.gene058651.t1 | AT5G28020 | 56.369 | 314 | 137 | 0 | 60 | 373 | 7 | 320 | 3.24e-116 | 341 |
| MS.gene058651.t1 | AT5G28020 | 56.369 | 314 | 137 | 0 | 60 | 373 | 7 | 320 | 3.24e-116 | 341 |
| MS.gene058651.t1 | AT5G28020 | 56.369 | 314 | 137 | 0 | 60 | 373 | 7 | 320 | 3.24e-116 | 341 |
| MS.gene058651.t1 | AT5G28020 | 56.369 | 314 | 137 | 0 | 60 | 373 | 7 | 320 | 3.24e-116 | 341 |
| MS.gene058651.t1 | AT5G28020 | 56.369 | 314 | 137 | 0 | 60 | 373 | 7 | 320 | 3.24e-116 | 341 |
| MS.gene058651.t1 | AT3G22460 | 60.150 | 266 | 86 | 1 | 108 | 373 | 1 | 246 | 2.98e-112 | 328 |
| MS.gene058651.t1 | AT5G28030 | 55.414 | 314 | 140 | 0 | 60 | 373 | 7 | 320 | 5.14e-112 | 330 |
| MS.gene058651.t1 | AT5G28030 | 55.414 | 314 | 140 | 0 | 60 | 373 | 7 | 320 | 5.14e-112 | 330 |
| MS.gene058651.t1 | AT5G28030 | 55.414 | 314 | 140 | 0 | 60 | 373 | 7 | 320 | 5.14e-112 | 330 |
| MS.gene058651.t1 | AT5G28030 | 55.414 | 314 | 140 | 0 | 60 | 373 | 7 | 320 | 5.14e-112 | 330 |
| MS.gene058651.t1 | AT3G03630 | 54.114 | 316 | 135 | 1 | 59 | 374 | 98 | 403 | 1.67e-110 | 329 |
| MS.gene058651.t1 | AT5G28030 | 53.968 | 252 | 116 | 0 | 60 | 311 | 7 | 258 | 1.07e-86 | 263 |
| MS.gene058651.t1 | AT3G22460 | 62.088 | 182 | 69 | 0 | 59 | 240 | 7 | 188 | 2.49e-81 | 247 |
| MS.gene058651.t1 | AT5G28020 | 54.701 | 234 | 106 | 0 | 140 | 373 | 1 | 234 | 2.09e-78 | 241 |
| MS.gene058651.t1 | AT1G55880 | 28.906 | 384 | 209 | 9 | 41 | 365 | 21 | 399 | 2.06e-38 | 142 |
| MS.gene058651.t1 | AT1G55880 | 29.259 | 270 | 149 | 4 | 41 | 269 | 21 | 289 | 1.10e-31 | 123 |
Find 104 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAATCAGTTTGGCATTTA+TGG | 0.111575 | 7.2:-27730910 | MS.gene058651:CDS |
| GAGAAAATCACCTTAACATT+AGG | 0.229682 | 7.2:+27730245 | None:intergenic |
| GGTAGCGGAGGCACGGTTTC+CGG | 0.231220 | 7.2:-27730296 | MS.gene058651:CDS |
| TTTCAATCATATTAGATATA+TGG | 0.257432 | 7.2:-27730151 | MS.gene058651:intron |
| CACTGTTCCTCCCATTCCTT+TGG | 0.269450 | 7.2:+27730779 | None:intergenic |
| GTAGCGGAGGCACGGTTTCC+GGG | 0.287571 | 7.2:-27730295 | MS.gene058651:CDS |
| CAGACTGTTCATCCAAGTTT+CGG | 0.294327 | 7.2:-27729370 | MS.gene058651:CDS |
| AGAAAATCACCTTAACATTA+GGG | 0.297633 | 7.2:+27730246 | None:intergenic |
| AACCTTACCTTAGTATTGGC+TGG | 0.308983 | 7.2:+27730693 | None:intergenic |
| AAACAACAGGTCCTGAGATA+TGG | 0.318320 | 7.2:-27730361 | MS.gene058651:CDS |
| CAGCTTCTGTCCGAAGGTCT+TGG | 0.322978 | 7.2:+27729320 | None:intergenic |
| AGGGTTTGTATGAGAGCATT+TGG | 0.332544 | 7.2:-27730828 | MS.gene058651:CDS |
| TCGATTCAACTAACCTTTCC+AGG | 0.333739 | 7.2:+27731045 | None:intergenic |
| AGACTGTTCATCCAAGTTTC+GGG | 0.334413 | 7.2:-27729369 | MS.gene058651:CDS |
| GACATATTTGTGATGGGAAT+AGG | 0.357383 | 7.2:-27730317 | MS.gene058651:CDS |
| ACAGGTCCTCATCAAATAAC+TGG | 0.359927 | 7.2:-27729990 | MS.gene058651:intron |
| GTTCCTCCCATTCCTTTGGT+TGG | 0.365478 | 7.2:+27730783 | None:intergenic |
| TTCTAGGTTGGTATATCGTC+TGG | 0.366637 | 7.2:-27729613 | MS.gene058651:intron |
| AATGGGAGGAACAGTGAAAA+AGG | 0.372245 | 7.2:-27730772 | MS.gene058651:CDS |
| TACCATGAGTCCTTCTTTCA+AGG | 0.380319 | 7.2:+27729768 | None:intergenic |
| TGTTGCAGCATAAAAGCATT+TGG | 0.385420 | 7.2:+27730726 | None:intergenic |
| ATCAGTTTGCCTTTGTTCTC+AGG | 0.389149 | 7.2:+27729553 | None:intergenic |
| AACCATCTTATATCCCTTCA+TGG | 0.389444 | 7.2:+27730884 | None:intergenic |
| CTTTCCAAGCTTGTGTAAGA+TGG | 0.401441 | 7.2:+27730852 | None:intergenic |
| CCTCATCAAATAACTGGAAA+TGG | 0.407277 | 7.2:-27729984 | MS.gene058651:CDS |
| GGCATTTATGGCTGCCATGA+AGG | 0.421016 | 7.2:-27730898 | MS.gene058651:CDS |
| ATCACAAAACCCTAATGTTA+AGG | 0.422500 | 7.2:-27730255 | MS.gene058651:intron |
| ACATCCATGTCCAGTATGTC+TGG | 0.425686 | 7.2:+27729948 | None:intergenic |
| CTTACACAAGCTTGGAAAGA+AGG | 0.427704 | 7.2:-27730848 | MS.gene058651:CDS |
| GGAGGCACGGTTTCCGGGGT+TGG | 0.433673 | 7.2:-27730290 | MS.gene058651:CDS |
| ATCAACCTCCTCATCATCAT+TGG | 0.433901 | 7.2:+27732201 | None:intergenic |
| TGTTAACCTTACCTTAGTAT+TGG | 0.438994 | 7.2:+27730689 | None:intergenic |
| CAGACCGGCACTTGCTATGA+TGG | 0.446594 | 7.2:-27731097 | MS.gene058651:CDS |
| AGGCAACATGGGAATCAGTT+TGG | 0.448530 | 7.2:-27730919 | MS.gene058651:CDS |
| AGACATTAATCGACCGAGAC+TGG | 0.451069 | 7.2:+27729286 | None:intergenic |
| TACCTTAGTATTGGCTGGGT+TGG | 0.454890 | 7.2:+27730698 | None:intergenic |
| CAAATAACTGGAAATGGTGT+TGG | 0.466995 | 7.2:-27729978 | MS.gene058651:CDS |
| TGGATTCAAACCAGACATAC+TGG | 0.467063 | 7.2:-27729958 | MS.gene058651:CDS |
| ACCTTACCTTAGTATTGGCT+GGG | 0.467817 | 7.2:+27730694 | None:intergenic |
| CCGTCTTGTTCCAAGACCTT+CGG | 0.470134 | 7.2:-27729330 | MS.gene058651:CDS |
| TTCCAACCCAGCCAATACTA+AGG | 0.471629 | 7.2:-27730700 | MS.gene058651:intron |
| ATTCCCATGTTGCCTGATGT+TGG | 0.472301 | 7.2:+27730927 | None:intergenic |
| CACAGTTGCAGCACTCAGAT+TGG | 0.473290 | 7.2:-27729584 | MS.gene058651:CDS |
| TTGGTACCAGGAAGATCTTT+AGG | 0.474343 | 7.2:+27732120 | None:intergenic |
| CATACTGGACATGGATGTAA+TGG | 0.480916 | 7.2:-27729943 | MS.gene058651:CDS |
| AACAACAGGTCCTGAGATAT+GGG | 0.481398 | 7.2:-27730360 | MS.gene058651:CDS |
| GATTTGCCTAAAGATCTTCC+TGG | 0.483439 | 7.2:-27732126 | MS.gene058651:CDS |
| CACTGATCCAACCAAAGGAA+TGG | 0.496426 | 7.2:-27730790 | MS.gene058651:CDS |
| AGGTATCGTTCCCCGAAACT+TGG | 0.499828 | 7.2:+27729358 | None:intergenic |
| TTTGTATCCTCCCATATCTC+AGG | 0.504891 | 7.2:+27730350 | None:intergenic |
| TCCTCATCATCATTGGATGC+TGG | 0.506377 | 7.2:+27732208 | None:intergenic |
| GCATTTATGGCTGCCATGAA+GGG | 0.510121 | 7.2:-27730897 | MS.gene058651:CDS |
| AGTTAACATGGCTAGGACAT+TGG | 0.511456 | 7.2:-27729791 | MS.gene058651:CDS |
| GTTTGCCTTTGTTCTCAGGT+AGG | 0.513242 | 7.2:+27729557 | None:intergenic |
| ACTGATCCAACCAAAGGAAT+GGG | 0.516662 | 7.2:-27730789 | MS.gene058651:CDS |
| TATGCCATCTTACACAAGCT+TGG | 0.524193 | 7.2:-27730856 | MS.gene058651:CDS |
| TTACACAAGCTTGGAAAGAA+GGG | 0.524356 | 7.2:-27730847 | MS.gene058651:CDS |
| GAGATATGGGAGGATACAAA+TGG | 0.524396 | 7.2:-27730347 | MS.gene058651:CDS |
| CATTTGGTGTGGATTCCAAA+AGG | 0.529158 | 7.2:+27730742 | None:intergenic |
| ATTCTGATAGAGCCAACATC+AGG | 0.532002 | 7.2:-27730939 | MS.gene058651:CDS |
| CAGTGAAGATGCAGTTAACA+TGG | 0.541587 | 7.2:-27729803 | MS.gene058651:CDS |
| AGGACATTGGCCTTGAAAGA+AGG | 0.544017 | 7.2:-27729778 | MS.gene058651:CDS |
| GTGCTGAATGGTGGTAAACC+TGG | 0.548416 | 7.2:-27730106 | MS.gene058651:intron |
| TAGCGGAGGCACGGTTTCCG+GGG | 0.556029 | 7.2:-27730294 | MS.gene058651:CDS |
| TATCTTAACAAAGTAACTGA+AGG | 0.556227 | 7.2:-27731542 | MS.gene058651:CDS |
| TGCCATGAAGGGATATAAGA+TGG | 0.557496 | 7.2:-27730886 | MS.gene058651:CDS |
| TTCAGCACATTACTTTCAGA+TGG | 0.557589 | 7.2:+27730121 | None:intergenic |
| CAGGTGCATTTCGAAACAAC+AGG | 0.558100 | 7.2:-27730374 | MS.gene058651:CDS |
| TGAAAACATGCAGCCAGTCT+CGG | 0.562721 | 7.2:-27729299 | MS.gene058651:CDS |
| AGAGCCAACATCAGGCAACA+TGG | 0.563901 | 7.2:-27730931 | MS.gene058651:CDS |
| CTACTGCTAGCATCAAAGAC+AGG | 0.569459 | 7.2:-27731478 | MS.gene058651:intron |
| GAACAAAGGCAAACTGATTG+TGG | 0.571821 | 7.2:-27729548 | MS.gene058651:intron |
| GAATTTGATAACTCCTGGAA+AGG | 0.576005 | 7.2:-27731058 | MS.gene058651:intron |
| CTTGGAACAAGACGGATGAC+AGG | 0.576272 | 7.2:+27729338 | None:intergenic |
| CAGCATAAAAGCATTTGGTG+TGG | 0.576924 | 7.2:+27730731 | None:intergenic |
| GGCCTTGAAAGAAGGACTCA+TGG | 0.577659 | 7.2:-27729770 | MS.gene058651:intron |
| CAAACCAGACATACTGGACA+TGG | 0.579358 | 7.2:-27729952 | MS.gene058651:CDS |
| ACAAGTTGACATATTTGTGA+TGG | 0.584399 | 7.2:-27730324 | MS.gene058651:CDS |
| CCATTTCCAGTTATTTGATG+AGG | 0.589789 | 7.2:+27729984 | None:intergenic |
| CAAGTTGACATATTTGTGAT+GGG | 0.592268 | 7.2:-27730323 | MS.gene058651:CDS |
| GGGAATAGGTAGCGGAGGCA+CGG | 0.600122 | 7.2:-27730303 | MS.gene058651:CDS |
| AACAAAGTAACTGAAGGATG+TGG | 0.601957 | 7.2:-27731536 | MS.gene058651:CDS |
| TCTTCCATCATAGCAAGTGC+CGG | 0.604090 | 7.2:+27731093 | None:intergenic |
| GCCAGCATCCAATGATGATG+AGG | 0.606622 | 7.2:-27732209 | MS.gene058651:CDS |
| CTGTCTTTGATGCTAGCAGT+AGG | 0.608366 | 7.2:+27731479 | None:intergenic |
| ATGAAGAAGAGGTTCTCTTG+AGG | 0.609055 | 7.2:+27732253 | None:intergenic |
| ATCATATTAGATATATGGAG+TGG | 0.610130 | 7.2:-27730146 | MS.gene058651:intron |
| AAGATGCAGTTAACATGGCT+AGG | 0.610341 | 7.2:-27729798 | MS.gene058651:CDS |
| GAGCCAACATCAGGCAACAT+GGG | 0.610601 | 7.2:-27730930 | MS.gene058651:CDS |
| CCGAAGGTCTTGGAACAAGA+CGG | 0.613637 | 7.2:+27729330 | None:intergenic |
| TCTGAAAGTAATGTGCTGAA+TGG | 0.619543 | 7.2:-27730118 | MS.gene058651:CDS |
| TTTGTGATGGGAATAGGTAG+CGG | 0.619890 | 7.2:-27730311 | MS.gene058651:CDS |
| AAAAGATGAAGAATCAACAC+TGG | 0.622283 | 7.2:+27732164 | None:intergenic |
| ATTCTCACTGATCCAACCAA+AGG | 0.629727 | 7.2:-27730795 | MS.gene058651:CDS |
| TAATGATGATGATGAAGAAG+AGG | 0.636238 | 7.2:+27732242 | None:intergenic |
| TTTAAGATATTGTCCAACCC+CGG | 0.638530 | 7.2:+27730277 | None:intergenic |
| GACTGTTCATCCAAGTTTCG+GGG | 0.652256 | 7.2:-27729368 | MS.gene058651:CDS |
| AGCATCCAATGATGATGAGG+AGG | 0.662832 | 7.2:-27732206 | MS.gene058651:CDS |
| GATCCAACCAAAGGAATGGG+AGG | 0.667757 | 7.2:-27730786 | MS.gene058651:CDS |
| GAAAGTAATGTGCTGAATGG+TGG | 0.674745 | 7.2:-27730115 | MS.gene058651:CDS |
| GTGATGGGAATAGGTAGCGG+AGG | 0.681582 | 7.2:-27730308 | MS.gene058651:CDS |
| ACTTTGTTAAGATAAACAAG+TGG | 0.682462 | 7.2:+27731551 | None:intergenic |
| GCTAACCTACCTGAGAACAA+AGG | 0.685849 | 7.2:-27729562 | MS.gene058651:CDS |
| AACAGGTCCTGAGATATGGG+AGG | 0.695778 | 7.2:-27730357 | MS.gene058651:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAAATTCTTGAATTT+TGG | + | chr7.2:27729656-27729675 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTCTTGAATTTT+GGG | + | chr7.2:27729655-27729674 | None:intergenic | 10.0% |
| !! | TATGATTGAAAAAATTTCAA+AGG | + | chr7.2:27731404-27731423 | None:intergenic | 15.0% |
| !! | TTTCAATCATATTAGATATA+TGG | - | chr7.2:27731413-27731432 | MS.gene058651:intron | 15.0% |
| !! | AATCATTAGATGTATACAAA+AGG | - | chr7.2:27729754-27729773 | MS.gene058651:intron | 20.0% |
| !! | ATACATAACTTACGTTAAAA+TGG | - | chr7.2:27731162-27731181 | MS.gene058651:intron | 20.0% |
| !! | CATTGAATAAGAGAAAAAAT+TGG | + | chr7.2:27729947-27729966 | None:intergenic | 20.0% |
| !! | GTAATATGAATTGTAATCTT+AGG | + | chr7.2:27731344-27731363 | None:intergenic | 20.0% |
| !! | TACATAACTTACGTTAAAAT+GGG | - | chr7.2:27731163-27731182 | MS.gene058651:intron | 20.0% |
| !!! | AAAAGGAATTTGAAATATAG+AGG | + | chr7.2:27730123-27730142 | None:intergenic | 20.0% |
| !!! | AAAGGAATTTGAAATATAGA+GGG | + | chr7.2:27730122-27730141 | None:intergenic | 20.0% |
| !!! | CAATTTATTTTTCAGCTTAT+TGG | - | chr7.2:27729983-27730002 | MS.gene058651:CDS | 20.0% |
| !!! | TTTTTTCTTCGAATTTTTCT+AGG | - | chr7.2:27731935-27731954 | MS.gene058651:intron | 20.0% |
| ! | AAATTCGGTCAAATTTAAAG+CGG | + | chr7.2:27730153-27730172 | None:intergenic | 25.0% |
| ! | AATAATCGATGCAATTTGAA+AGG | - | chr7.2:27730347-27730366 | MS.gene058651:CDS | 25.0% |
| ! | AATGTTTGTTCTTCAAACTT+TGG | + | chr7.2:27729854-27729873 | None:intergenic | 25.0% |
| ! | ACTTTGTTAAGATAAACAAG+TGG | + | chr7.2:27730016-27730035 | None:intergenic | 25.0% |
| ! | AGAAAATCACCTTAACATTA+GGG | + | chr7.2:27731321-27731340 | None:intergenic | 25.0% |
| ! | ATAGTACTTTGTTCCTTAAT+TGG | - | chr7.2:27729526-27729545 | MS.gene058651:intron | 25.0% |
| ! | ATATACATGTACTTACTTCT+AGG | + | chr7.2:27731654-27731673 | None:intergenic | 25.0% |
| ! | ATCATATTAGATATATGGAG+TGG | - | chr7.2:27731418-27731437 | MS.gene058651:intron | 25.0% |
| ! | ATTCATGTGATTTACTTGAT+TGG | + | chr7.2:27730178-27730197 | None:intergenic | 25.0% |
| ! | CAATATTAAGGTGAAATTCA+TGG | + | chr7.2:27731883-27731902 | None:intergenic | 25.0% |
| ! | TACAAGAAAAAATCTCAAGA+AGG | - | chr7.2:27730382-27730401 | MS.gene058651:intron | 25.0% |
| ! | TACTATTTATGTTCGAAACA+GGG | - | chr7.2:27730911-27730930 | MS.gene058651:CDS | 25.0% |
| ! | TATCTTAACAAAGTAACTGA+AGG | - | chr7.2:27730022-27730041 | MS.gene058651:intron | 25.0% |
| ! | TCACTTGCAATTCAATATTA+AGG | + | chr7.2:27731895-27731914 | None:intergenic | 25.0% |
| ! | TTCATGTTTGTGTTAATTGA+TGG | - | chr7.2:27730594-27730613 | MS.gene058651:intron | 25.0% |
| !! | AAAAAGAATTTGATAACTCC+TGG | - | chr7.2:27730501-27730520 | MS.gene058651:intron | 25.0% |
| !! | AAGGAATTTGAAATATAGAG+GGG | + | chr7.2:27730121-27730140 | None:intergenic | 25.0% |
| !! | AGTTGGATAGAGAAATATTT+TGG | + | chr7.2:27729626-27729645 | None:intergenic | 25.0% |
| !! | TTTACTTGATTGGTCAAATT+CGG | + | chr7.2:27730168-27730187 | None:intergenic | 25.0% |
| !!! | TCAGTTCACTTTTTATCAAA+AGG | - | chr7.2:27729826-27729845 | MS.gene058651:intron | 25.0% |
| !!! | TGAAACATGTTTTTTGATGT+TGG | + | chr7.2:27729466-27729485 | None:intergenic | 25.0% |
| !!! | TTATTTTTCAGCTTATTGGT+AGG | - | chr7.2:27729987-27730006 | MS.gene058651:CDS | 25.0% |
| AAAAGATGAAGAATCAACAC+TGG | + | chr7.2:27729403-27729422 | None:intergenic | 30.0% | |
| ACAAACTTATGTTGTGTTGT+AGG | - | chr7.2:27731734-27731753 | MS.gene058651:intron | 30.0% | |
| ATCACAAAACCCTAATGTTA+AGG | - | chr7.2:27731309-27731328 | MS.gene058651:intron | 30.0% | |
| ATGTAAACAACGAGCAAAAT+TGG | + | chr7.2:27730559-27730578 | None:intergenic | 30.0% | |
| CATCAAAAAACATGTTTCAC+AGG | - | chr7.2:27729467-27729486 | MS.gene058651:intron | 30.0% | |
| GAGAAAATCACCTTAACATT+AGG | + | chr7.2:27731322-27731341 | None:intergenic | 30.0% | |
| GGATCGTAAAAAATAGTAGT+TGG | + | chr7.2:27731064-27731083 | None:intergenic | 30.0% | |
| GTACTATTTATGTTCGAAAC+AGG | - | chr7.2:27730910-27730929 | MS.gene058651:CDS | 30.0% | |
| TACAACACAACATAAGTTTG+TGG | + | chr7.2:27731735-27731754 | None:intergenic | 30.0% | |
| TGTTAACCTTACCTTAGTAT+TGG | + | chr7.2:27730878-27730897 | None:intergenic | 30.0% | |
| TTACGTTAAAATGGGAAAAC+AGG | - | chr7.2:27731171-27731190 | MS.gene058651:intron | 30.0% | |
| TTGTTAGATAGTAGCTATGA+CGG | - | chr7.2:27730934-27730953 | MS.gene058651:CDS | 30.0% | |
| ! | ACAAGTTGACATATTTGTGA+TGG | - | chr7.2:27731240-27731259 | MS.gene058651:intron | 30.0% |
| ! | AGGAATTTGAAATATAGAGG+GGG | + | chr7.2:27730120-27730139 | None:intergenic | 30.0% |
| ! | CAAGTTGACATATTTGTGAT+GGG | - | chr7.2:27731241-27731260 | MS.gene058651:intron | 30.0% |
| ! | TAATGATGATGATGAAGAAG+AGG | + | chr7.2:27729325-27729344 | None:intergenic | 30.0% |
| ! | TTCTTCGAATTTTTCTAGGT+TGG | - | chr7.2:27731939-27731958 | MS.gene058651:intron | 30.0% |
| ! | TTTAAAGCGGTATCTACAAA+AGG | + | chr7.2:27730140-27730159 | None:intergenic | 30.0% |
| !! | TGAATTTTGGGTAATGAAGT+TGG | + | chr7.2:27729643-27729662 | None:intergenic | 30.0% |
| AACAAAGTAACTGAAGGATG+TGG | - | chr7.2:27730028-27730047 | MS.gene058651:intron | 35.0% | |
| AACATAAGTTTGTGGCAGTT+AGG | + | chr7.2:27731727-27731746 | None:intergenic | 35.0% | |
| AACCATCTTATATCCCTTCA+TGG | + | chr7.2:27730683-27730702 | None:intergenic | 35.0% | |
| ATCGATGCAATTTGAAAGGT+CGG | - | chr7.2:27730351-27730370 | MS.gene058651:CDS | 35.0% | |
| ATTTGATGAGGACCTGTATA+TGG | + | chr7.2:27731571-27731590 | None:intergenic | 35.0% | |
| CAAATAACTGGAAATGGTGT+TGG | - | chr7.2:27731586-27731605 | MS.gene058651:intron | 35.0% | |
| CAGCAGAACATCAACAAAAT+TGG | + | chr7.2:27729715-27729734 | None:intergenic | 35.0% | |
| CCATTTCCAGTTATTTGATG+AGG | + | chr7.2:27731583-27731602 | None:intergenic | 35.0% | |
| CCTCATCAAATAACTGGAAA+TGG | - | chr7.2:27731580-27731599 | MS.gene058651:intron | 35.0% | |
| GAAACAAAAAGATGCTTACC+AGG | + | chr7.2:27731479-27731498 | None:intergenic | 35.0% | |
| TAAACAACGAGCAAAATTGG+TGG | + | chr7.2:27730556-27730575 | None:intergenic | 35.0% | |
| TCTGAAAGTAATGTGCTGAA+TGG | - | chr7.2:27731446-27731465 | MS.gene058651:intron | 35.0% | |
| TTACACAAGCTTGGAAAGAA+GGG | - | chr7.2:27730717-27730736 | MS.gene058651:CDS | 35.0% | |
| TTCAGCACATTACTTTCAGA+TGG | + | chr7.2:27731446-27731465 | None:intergenic | 35.0% | |
| TTTCTTGAATTTCGACAGAC+CGG | - | chr7.2:27730452-27730471 | MS.gene058651:intron | 35.0% | |
| ! | AAACCAGTGTTTGTTAACCA+CGG | + | chr7.2:27731085-27731104 | None:intergenic | 35.0% |
| ! | ATGCTGTAACTGTTTTGCAT+TGG | - | chr7.2:27729557-27729576 | MS.gene058651:CDS | 35.0% |
| ! | GAAAAAGGCTTATGACCTTT+TGG | - | chr7.2:27730807-27730826 | MS.gene058651:CDS | 35.0% |
| ! | GAATTTGATAACTCCTGGAA+AGG | - | chr7.2:27730506-27730525 | MS.gene058651:intron | 35.0% |
| ! | GACATATTTGTGATGGGAAT+AGG | - | chr7.2:27731247-27731266 | MS.gene058651:intron | 35.0% |
| ! | TTTAAGATATTGTCCAACCC+CGG | + | chr7.2:27731290-27731309 | None:intergenic | 35.0% |
| ! | TTTGAAATATAGAGGGGGTA+AGG | + | chr7.2:27730115-27730134 | None:intergenic | 35.0% |
| !! | TCAAGAAGGTCGTGTTTTTA+GGG | - | chr7.2:27730396-27730415 | MS.gene058651:intron | 35.0% |
| !! | TGTTGCAGCATAAAAGCATT+TGG | + | chr7.2:27730841-27730860 | None:intergenic | 35.0% |
| !!! | AAATATTTTGGCCATACACG+TGG | + | chr7.2:27729614-27729633 | None:intergenic | 35.0% |
| !!! | CTACTATTTTTTACGATCCG+TGG | - | chr7.2:27731065-27731084 | MS.gene058651:CDS | 35.0% |
| !!! | TGTTTTTTGATGTTGGTACC+AGG | + | chr7.2:27729459-27729478 | None:intergenic | 35.0% |
| AAACAACAGGTCCTGAGATA+TGG | - | chr7.2:27731203-27731222 | MS.gene058651:intron | 40.0% | |
| AACAACAGGTCCTGAGATAT+GGG | - | chr7.2:27731204-27731223 | MS.gene058651:intron | 40.0% | |
| AAGATGCAGTTAACATGGCT+AGG | - | chr7.2:27731766-27731785 | MS.gene058651:intron | 40.0% | |
| AATGGGAGGAACAGTGAAAA+AGG | - | chr7.2:27730792-27730811 | MS.gene058651:CDS | 40.0% | |
| ACAGGTCCTCATCAAATAAC+TGG | - | chr7.2:27731574-27731593 | MS.gene058651:intron | 40.0% | |
| ACTGATCCAACCAAAGGAAT+GGG | - | chr7.2:27730775-27730794 | MS.gene058651:CDS | 40.0% | |
| AGACTGTTCATCCAAGTTTC+GGG | - | chr7.2:27732195-27732214 | MS.gene058651:CDS | 40.0% | |
| AGCATCACAGTCACCAATTA+AGG | + | chr7.2:27729542-27729561 | None:intergenic | 40.0% | |
| AGTTAACATGGCTAGGACAT+TGG | - | chr7.2:27731773-27731792 | MS.gene058651:intron | 40.0% | |
| ATCAACCTCCTCATCATCAT+TGG | + | chr7.2:27729366-27729385 | None:intergenic | 40.0% | |
| ATCAGTTTGCCTTTGTTCTC+AGG | + | chr7.2:27732014-27732033 | None:intergenic | 40.0% | |
| ATGAAGAAGAGGTTCTCTTG+AGG | + | chr7.2:27729314-27729333 | None:intergenic | 40.0% | |
| ATTCTCACTGATCCAACCAA+AGG | - | chr7.2:27730769-27730788 | MS.gene058651:CDS | 40.0% | |
| ATTCTGATAGAGCCAACATC+AGG | - | chr7.2:27730625-27730644 | MS.gene058651:intron | 40.0% | |
| CAAGTCTCTTACTGCGAAAT+CGG | - | chr7.2:27731538-27731557 | MS.gene058651:CDS | 40.0% | |
| CAGACTGTTCATCCAAGTTT+CGG | - | chr7.2:27732194-27732213 | MS.gene058651:CDS | 40.0% | |
| CAGTGAAGATGCAGTTAACA+TGG | - | chr7.2:27731761-27731780 | MS.gene058651:intron | 40.0% | |
| CATACTGGACATGGATGTAA+TGG | - | chr7.2:27731621-27731640 | MS.gene058651:intron | 40.0% | |
| CCATCAAATAGTGACTAGAG+CGG | - | chr7.2:27731006-27731025 | MS.gene058651:intron | 40.0% | |
| CTTACACAAGCTTGGAAAGA+AGG | - | chr7.2:27730716-27730735 | MS.gene058651:CDS | 40.0% | |
| CTTTCCAAGCTTGTGTAAGA+TGG | + | chr7.2:27730715-27730734 | None:intergenic | 40.0% | |
| GAAAGTAATGTGCTGAATGG+TGG | - | chr7.2:27731449-27731468 | MS.gene058651:intron | 40.0% | |
| GAACAAAGGCAAACTGATTG+TGG | - | chr7.2:27732016-27732035 | MS.gene058651:intron | 40.0% | |
| GAGATATGGGAGGATACAAA+TGG | - | chr7.2:27731217-27731236 | MS.gene058651:intron | 40.0% | |
| GATTTGCCTAAAGATCTTCC+TGG | - | chr7.2:27729438-27729457 | MS.gene058651:intron | 40.0% | |
| GGGAATCAGTTTGGCATTTA+TGG | - | chr7.2:27730654-27730673 | MS.gene058651:intron | 40.0% | |
| TACCATGAGTCCTTCTTTCA+AGG | + | chr7.2:27731799-27731818 | None:intergenic | 40.0% | |
| TATGCCATCTTACACAAGCT+TGG | - | chr7.2:27730708-27730727 | MS.gene058651:CDS | 40.0% | |
| TCGATTCAACTAACCTTTCC+AGG | + | chr7.2:27730522-27730541 | None:intergenic | 40.0% | |
| TGCCATGAAGGGATATAAGA+TGG | - | chr7.2:27730678-27730697 | MS.gene058651:intron | 40.0% | |
| TGGATTCAAACCAGACATAC+TGG | - | chr7.2:27731606-27731625 | MS.gene058651:intron | 40.0% | |
| TTGGTACCAGGAAGATCTTT+AGG | + | chr7.2:27729447-27729466 | None:intergenic | 40.0% | |
| TTTGTATCCTCCCATATCTC+AGG | + | chr7.2:27731217-27731236 | None:intergenic | 40.0% | |
| ! | ATGCTTCGCACTGTGATTTT+AGG | - | chr7.2:27732126-27732145 | MS.gene058651:CDS | 40.0% |
| ! | CTCAAGAAGGTCGTGTTTTT+AGG | - | chr7.2:27730395-27730414 | MS.gene058651:intron | 40.0% |
| ! | TTTGTGATGGGAATAGGTAG+CGG | - | chr7.2:27731253-27731272 | MS.gene058651:intron | 40.0% |
| !! | AACCTTACCTTAGTATTGGC+TGG | + | chr7.2:27730874-27730893 | None:intergenic | 40.0% |
| !! | ACCTTACCTTAGTATTGGCT+GGG | + | chr7.2:27730873-27730892 | None:intergenic | 40.0% |
| !! | AGGGTTTGTATGAGAGCATT+TGG | - | chr7.2:27730736-27730755 | MS.gene058651:CDS | 40.0% |
| !! | CAGCATAAAAGCATTTGGTG+TGG | + | chr7.2:27730836-27730855 | None:intergenic | 40.0% |
| !! | CATTTGGTGTGGATTCCAAA+AGG | + | chr7.2:27730825-27730844 | None:intergenic | 40.0% |
| !! | TTCTAGGTTGGTATATCGTC+TGG | - | chr7.2:27731951-27731970 | MS.gene058651:intron | 40.0% |
| ACATCCATGTCCAGTATGTC+TGG | + | chr7.2:27731619-27731638 | None:intergenic | 45.0% | |
| ACCCAGCCAATACTAAGGTA+AGG | - | chr7.2:27730869-27730888 | MS.gene058651:CDS | 45.0% | |
| AGGCAACATGGGAATCAGTT+TGG | - | chr7.2:27730645-27730664 | MS.gene058651:intron | 45.0% | |
| ATCGGATGTCGTCCATATAC+AGG | - | chr7.2:27731556-27731575 | MS.gene058651:CDS | 45.0% | |
| ATTCCCATGTTGCCTGATGT+TGG | + | chr7.2:27730640-27730659 | None:intergenic | 45.0% | |
| CAAACCAGACATACTGGACA+TGG | - | chr7.2:27731612-27731631 | MS.gene058651:intron | 45.0% | |
| CACTGATCCAACCAAAGGAA+TGG | - | chr7.2:27730774-27730793 | MS.gene058651:CDS | 45.0% | |
| CAGGTGCATTTCGAAACAAC+AGG | - | chr7.2:27731190-27731209 | MS.gene058651:intron | 45.0% | |
| CCGCTCTAGTCACTATTTGA+TGG | + | chr7.2:27731009-27731028 | None:intergenic | 45.0% | |
| CTACTGCTAGCATCAAAGAC+AGG | - | chr7.2:27730086-27730105 | MS.gene058651:intron | 45.0% | |
| CTCATATCATGCCACGTGTA+TGG | - | chr7.2:27729600-27729619 | MS.gene058651:CDS | 45.0% | |
| CTGTCTTTGATGCTAGCAGT+AGG | + | chr7.2:27730088-27730107 | None:intergenic | 45.0% | |
| GACTGTTCATCCAAGTTTCG+GGG | - | chr7.2:27732196-27732215 | MS.gene058651:CDS | 45.0% | |
| GATCCGTGGTTAACAAACAC+TGG | - | chr7.2:27731079-27731098 | MS.gene058651:CDS | 45.0% | |
| GCATTTATGGCTGCCATGAA+GGG | - | chr7.2:27730667-27730686 | MS.gene058651:intron | 45.0% | |
| GCTAACCTACCTGAGAACAA+AGG | - | chr7.2:27732002-27732021 | MS.gene058651:intron | 45.0% | |
| GTTTGCCTTTGTTCTCAGGT+AGG | + | chr7.2:27732010-27732029 | None:intergenic | 45.0% | |
| TCCTCATCATCATTGGATGC+TGG | + | chr7.2:27729359-27729378 | None:intergenic | 45.0% | |
| TCTTCCATCATAGCAAGTGC+CGG | + | chr7.2:27730474-27730493 | None:intergenic | 45.0% | |
| TGAAAACATGCAGCCAGTCT+CGG | - | chr7.2:27732265-27732284 | MS.gene058651:CDS | 45.0% | |
| TGGCAGTTAGGATAAACGCA+AGG | + | chr7.2:27731715-27731734 | None:intergenic | 45.0% | |
| TTCCAACCCAGCCAATACTA+AGG | - | chr7.2:27730864-27730883 | MS.gene058651:CDS | 45.0% | |
| ! | AACGAGCAAAATTGGTGGCA+TGG | + | chr7.2:27730551-27730570 | None:intergenic | 45.0% |
| ! | AGCATCCAATGATGATGAGG+AGG | - | chr7.2:27729358-27729377 | MS.gene058651:CDS | 45.0% |
| ! | TGTTTTCAGCTTCTGTCCGA+AGG | + | chr7.2:27732253-27732272 | None:intergenic | 45.0% |
| !! | AGGACATTGGCCTTGAAAGA+AGG | - | chr7.2:27731786-27731805 | MS.gene058651:intron | 45.0% |
| !! | TACCTTAGTATTGGCTGGGT+TGG | + | chr7.2:27730869-27730888 | None:intergenic | 45.0% |
| !!! | TTTTTTAAACAATTTTTTAT+TGG | - | chr7.2:27729911-27729930 | MS.gene058651:intron | 5.0% |
| AACAGGTCCTGAGATATGGG+AGG | - | chr7.2:27731207-27731226 | MS.gene058651:intron | 50.0% | |
| AGAGCCAACATCAGGCAACA+TGG | - | chr7.2:27730633-27730652 | MS.gene058651:intron | 50.0% | |
| CACAGTTGCAGCACTCAGAT+TGG | - | chr7.2:27731980-27731999 | MS.gene058651:intron | 50.0% | |
| CACTGTTCCTCCCATTCCTT+TGG | + | chr7.2:27730788-27730807 | None:intergenic | 50.0% | |
| CCGAAGGTCTTGGAACAAGA+CGG | + | chr7.2:27732237-27732256 | None:intergenic | 50.0% | |
| CTTGGAACAAGACGGATGAC+AGG | + | chr7.2:27732229-27732248 | None:intergenic | 50.0% | |
| GAGCCAACATCAGGCAACAT+GGG | - | chr7.2:27730634-27730653 | MS.gene058651:intron | 50.0% | |
| GATCCAACCAAAGGAATGGG+AGG | - | chr7.2:27730778-27730797 | MS.gene058651:CDS | 50.0% | |
| GGCATTTATGGCTGCCATGA+AGG | - | chr7.2:27730666-27730685 | MS.gene058651:intron | 50.0% | |
| GGCCTTGAAAGAAGGACTCA+TGG | - | chr7.2:27731794-27731813 | MS.gene058651:intron | 50.0% | |
| GTGCTGAATGGTGGTAAACC+TGG | - | chr7.2:27731458-27731477 | MS.gene058651:intron | 50.0% | |
| GTTCCTCCCATTCCTTTGGT+TGG | + | chr7.2:27730784-27730803 | None:intergenic | 50.0% | |
| ! | AGGTATCGTTCCCCGAAACT+TGG | + | chr7.2:27732209-27732228 | None:intergenic | 50.0% |
| ! | CCGTCTTGTTCCAAGACCTT+CGG | - | chr7.2:27732234-27732253 | MS.gene058651:CDS | 50.0% |
| ! | GCCAGCATCCAATGATGATG+AGG | - | chr7.2:27729355-27729374 | MS.gene058651:CDS | 50.0% |
| CAGCTTCTGTCCGAAGGTCT+TGG | + | chr7.2:27732247-27732266 | None:intergenic | 55.0% | |
| ! | GTGATGGGAATAGGTAGCGG+AGG | - | chr7.2:27731256-27731275 | MS.gene058651:intron | 55.0% |
| !! | CAGACCGGCACTTGCTATGA+TGG | - | chr7.2:27730467-27730486 | MS.gene058651:intron | 55.0% |
| !! | GGGAATAGGTAGCGGAGGCA+CGG | - | chr7.2:27731261-27731280 | MS.gene058651:intron | 60.0% |
| ! | GTAGCGGAGGCACGGTTTCC+GGG | - | chr7.2:27731269-27731288 | MS.gene058651:intron | 65.0% |
| ! | TAGCGGAGGCACGGTTTCCG+GGG | - | chr7.2:27731270-27731289 | MS.gene058651:intron | 65.0% |
| !! | GGTAGCGGAGGCACGGTTTC+CGG | - | chr7.2:27731268-27731287 | MS.gene058651:intron | 65.0% |
| ! | GGAGGCACGGTTTCCGGGGT+TGG | - | chr7.2:27731274-27731293 | MS.gene058651:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 27729291 | 27732295 | 27729291 | ID=MS.gene058651 |
| chr7.2 | mRNA | 27729291 | 27732295 | 27729291 | ID=MS.gene058651.t1;Parent=MS.gene058651 |
| chr7.2 | exon | 27732098 | 27732295 | 27732098 | ID=MS.gene058651.t1.exon1;Parent=MS.gene058651.t1 |
| chr7.2 | CDS | 27732098 | 27732295 | 27732098 | ID=cds.MS.gene058651.t1;Parent=MS.gene058651.t1 |
| chr7.2 | exon | 27731479 | 27731588 | 27731479 | ID=MS.gene058651.t1.exon2;Parent=MS.gene058651.t1 |
| chr7.2 | CDS | 27731479 | 27731588 | 27731479 | ID=cds.MS.gene058651.t1;Parent=MS.gene058651.t1 |
| chr7.2 | exon | 27731059 | 27731116 | 27731059 | ID=MS.gene058651.t1.exon3;Parent=MS.gene058651.t1 |
| chr7.2 | CDS | 27731059 | 27731116 | 27731059 | ID=cds.MS.gene058651.t1;Parent=MS.gene058651.t1 |
| chr7.2 | exon | 27730701 | 27730964 | 27730701 | ID=MS.gene058651.t1.exon4;Parent=MS.gene058651.t1 |
| chr7.2 | CDS | 27730701 | 27730964 | 27730701 | ID=cds.MS.gene058651.t1;Parent=MS.gene058651.t1 |
| chr7.2 | exon | 27730256 | 27730393 | 27730256 | ID=MS.gene058651.t1.exon5;Parent=MS.gene058651.t1 |
| chr7.2 | CDS | 27730256 | 27730393 | 27730256 | ID=cds.MS.gene058651.t1;Parent=MS.gene058651.t1 |
| chr7.2 | exon | 27730107 | 27730158 | 27730107 | ID=MS.gene058651.t1.exon6;Parent=MS.gene058651.t1 |
| chr7.2 | CDS | 27730107 | 27730158 | 27730107 | ID=cds.MS.gene058651.t1;Parent=MS.gene058651.t1 |
| chr7.2 | exon | 27729929 | 27730008 | 27729929 | ID=MS.gene058651.t1.exon7;Parent=MS.gene058651.t1 |
| chr7.2 | CDS | 27729929 | 27730008 | 27729929 | ID=cds.MS.gene058651.t1;Parent=MS.gene058651.t1 |
| chr7.2 | exon | 27729771 | 27729830 | 27729771 | ID=MS.gene058651.t1.exon8;Parent=MS.gene058651.t1 |
| chr7.2 | CDS | 27729771 | 27729830 | 27729771 | ID=cds.MS.gene058651.t1;Parent=MS.gene058651.t1 |
| chr7.2 | exon | 27729549 | 27729629 | 27729549 | ID=MS.gene058651.t1.exon9;Parent=MS.gene058651.t1 |
| chr7.2 | CDS | 27729549 | 27729629 | 27729549 | ID=cds.MS.gene058651.t1;Parent=MS.gene058651.t1 |
| chr7.2 | exon | 27729291 | 27729389 | 27729291 | ID=MS.gene058651.t1.exon10;Parent=MS.gene058651.t1 |
| chr7.2 | CDS | 27729291 | 27729389 | 27729291 | ID=cds.MS.gene058651.t1;Parent=MS.gene058651.t1 |
| Gene Sequence |
| Protein sequence |
