AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene000226

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000226.t1 MTR_2g072830 93.531 371 13 2 1 371 1 360 0.0 684
MS.gene000226.t1 MTR_4g067310 28.814 295 174 10 100 369 46 329 7.88e-19 86.7
MS.gene000226.t1 MTR_2g098950 27.645 293 180 10 100 369 45 328 3.03e-16 79.3
MS.gene000226.t1 MTR_1g076850 25.979 281 180 9 100 359 39 312 1.87e-13 70.9
MS.gene000226.t1 MTR_5g079460 26.503 366 218 11 47 368 23 381 3.11e-13 70.9
MS.gene000226.t1 MTR_6g089480 25.000 292 189 8 100 368 25 309 3.54e-13 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene000226.t1 AT1G17160 67.116 371 97 4 23 368 5 375 2.32e-173 488
MS.gene000226.t1 AT1G17160 64.826 344 96 4 23 341 5 348 1.25e-153 437
MS.gene000226.t1 AT1G06030 28.981 314 189 10 80 368 20 324 6.97e-17 81.3
MS.gene000226.t1 AT1G06020 28.475 295 179 8 100 371 41 326 2.44e-16 79.7
MS.gene000226.t1 AT1G66430 27.056 377 220 13 25 368 25 379 6.06e-16 79.0
MS.gene000226.t1 AT3G59480 27.891 294 178 11 100 369 41 324 1.02e-15 77.8
MS.gene000226.t1 AT2G31390 27.707 314 193 9 80 368 18 322 1.64e-15 77.0
MS.gene000226.t1 AT4G10260 27.744 328 189 13 61 359 2 310 6.31e-15 75.5
MS.gene000226.t1 AT5G51830 26.351 296 182 11 100 369 54 339 2.43e-11 64.7
MS.gene000226.t1 AT5G51830 26.351 296 182 11 100 369 54 339 2.43e-11 64.7
MS.gene000226.t1 AT5G03300 24.451 319 197 11 73 360 38 343 9.91e-11 62.8

Find 115 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTTTAGCTCACCAATTTA+TGG 0.116552 2.3:+23355426 None:intergenic
AAGGAATTGGATTGTGTTAA+TGG 0.176298 2.3:+23358592 None:intergenic
ACCTATTCCACAAGAATTAT+TGG 0.176458 2.3:-23355549 MS.gene000226:CDS
TTGGATTGTGTTAATGGGTT+TGG 0.321216 2.3:+23358598 None:intergenic
AGTGAACTTGGTCGCCTTAC+AGG 0.326669 2.3:-23355497 MS.gene000226:CDS
ACTTGAACATTAACAAAATC+AGG 0.326847 2.3:+23356581 None:intergenic
AAAATGGCAGGTTGCTGAAT+TGG 0.327018 2.3:+23354527 None:intergenic
TCCAATAATTCTTGTGGAAT+AGG 0.336587 2.3:+23355548 None:intergenic
TTCTCTATGTGTTCAAGTTA+AGG 0.339622 2.3:-23354292 MS.gene000226:CDS
TTGGAGGTTGTTTCCTCCGC+TGG 0.341293 2.3:-23356629 MS.gene000226:CDS
AAATCTGAGGCATTCCTTCT+TGG 0.343182 2.3:+23354424 None:intergenic
TTGAGTTTGGTTGATTTGTA+AGG 0.344764 2.3:+23358639 None:intergenic
GTTCTTCTCCTTCTATGAAA+AGG 0.376450 2.3:+23354549 None:intergenic
AGATTGTTTCGCCTTCCTTC+GGG 0.376760 2.3:+23358429 None:intergenic
TGCTGCAAAATGCCATAAAT+TGG 0.377917 2.3:-23355438 MS.gene000226:intron
TATGAAAAGGGCAGATCCTT+TGG 0.380777 2.3:+23354562 None:intergenic
GAGATTGTTTCGCCTTCCTT+CGG 0.386856 2.3:+23358428 None:intergenic
GGGTGTTGAATCGAAGGAAT+TGG 0.392549 2.3:+23358579 None:intergenic
AAGGAATGCCTCAGATTTGC+CGG 0.394393 2.3:-23354419 MS.gene000226:intron
TCTCTATGTGTTCAAGTTAA+GGG 0.396310 2.3:-23354291 MS.gene000226:CDS
CAGAATTCTATTGTTATTGT+TGG 0.396702 2.3:-23356698 MS.gene000226:CDS
AGGAATTGGATTGTGTTAAT+GGG 0.400463 2.3:+23358593 None:intergenic
GTGGTGAAAGTGTTTGAGTT+TGG 0.416247 2.3:+23358626 None:intergenic
CACTTCGAGACGGTGGTGTT+CGG 0.416914 2.3:-23356790 MS.gene000226:CDS
GTTGATTTGTAAGGTGGTAA+TGG 0.431089 2.3:+23358648 None:intergenic
AATTCTATTGTTATTGTTGG+TGG 0.432203 2.3:-23356695 MS.gene000226:CDS
AACTTCTTAATCATCATTGA+AGG 0.432433 2.3:-23354230 None:intergenic
GTGGTGATGAAAGGGTTGTT+TGG 0.433676 2.3:+23358672 None:intergenic
TTTGCTGTGGCCTTGGTGGA+GGG 0.436917 2.3:-23354452 MS.gene000226:CDS
GTGGTGCTAATGTGAGTTGT+TGG 0.437540 2.3:-23356676 MS.gene000226:CDS
ATTGTGCCTTCTGCTCCAAC+TGG 0.444480 2.3:-23356752 MS.gene000226:CDS
AGATTTCCTATCCGGCATGC+TGG 0.453661 2.3:+23354260 None:intergenic
TTTACAGCGAAACGCAAGAC+TGG 0.456847 2.3:+23358527 None:intergenic
ATCTCTTCAAAACTTTCAGT+TGG 0.463975 2.3:+23355470 None:intergenic
TCGAGAACAGATTTCCTATC+CGG 0.464837 2.3:+23354252 None:intergenic
CCTATCCGGCATGCTGGGAA+TGG 0.464959 2.3:+23354266 None:intergenic
CGACCAAGTTCACTTTCGTT+GGG 0.466795 2.3:+23355506 None:intergenic
GCGACCAAGTTCACTTTCGT+TGG 0.467166 2.3:+23355505 None:intergenic
TTCCAGTAATATTTGATGCC+GGG 0.467282 2.3:-23355583 MS.gene000226:CDS
GACGTAAATGTCGGCATTGG+CGG 0.470984 2.3:+23358466 None:intergenic
TTTCGCCTTCCTTCGGGAGG+CGG 0.474841 2.3:+23358435 None:intergenic
AAGCAAGTTCTCGTGAAACT+TGG 0.477329 2.3:-23354587 MS.gene000226:CDS
TTGTTATGCTTCAGTCTAGT+GGG 0.481852 2.3:-23356721 MS.gene000226:CDS
AGTCCCAACGAAAGTGAACT+TGG 0.482287 2.3:-23355509 MS.gene000226:CDS
TTCTTCTCCTTCTATGAAAA+GGG 0.482858 2.3:+23354550 None:intergenic
AAAACAGTCGTTGACACAAC+CGG 0.484040 2.3:-23354500 MS.gene000226:CDS
TTTCAGTTGGAAGTCCTGTA+AGG 0.485492 2.3:+23355483 None:intergenic
ACCGGTGGAGTCTGTGAGGA+TGG 0.488517 2.3:+23358503 None:intergenic
TGGAGGTTGTTTCCTCCGCT+GGG 0.489971 2.3:-23356628 MS.gene000226:CDS
TCCGACTTACTTCCTCGGTC+AGG 0.490068 2.3:-23358333 MS.gene000226:intron
GTTCCAGTAATATTTGATGC+CGG 0.495140 2.3:-23355584 MS.gene000226:CDS
TGGAACACCAGCATTCTTTG+CGG 0.504503 2.3:+23355601 None:intergenic
AAAAGCGGTCAGACGTTAGC+CGG 0.506197 2.3:-23358401 MS.gene000226:CDS
GTTGTTATGCTTCAGTCTAG+TGG 0.508616 2.3:-23356722 MS.gene000226:CDS
GACTCTGCCACCTAAGCAGT+TGG 0.509248 2.3:-23356648 MS.gene000226:CDS
GAAACAACCTCCAACTGCTT+AGG 0.511706 2.3:+23356638 None:intergenic
CCATTCCCAGCATGCCGGAT+AGG 0.512773 2.3:-23354266 MS.gene000226:CDS
ATCGACCGCCTCCCGAAGGA+AGG 0.524569 2.3:-23358440 MS.gene000226:CDS
TGTTAATGTTCAAGTGGCAA+AGG 0.525790 2.3:-23356573 MS.gene000226:intron
ACAAAATCCAATAATTCTTG+TGG 0.527223 2.3:+23355542 None:intergenic
GATTTCCTATCCGGCATGCT+GGG 0.528334 2.3:+23354261 None:intergenic
GGTAATGGTGTGGTGATGAA+AGG 0.529006 2.3:+23358663 None:intergenic
CAGACGTTAGCCGGCGGGAA+AGG 0.530993 2.3:-23358392 MS.gene000226:CDS
AGTGAAAGTATCACCAGCTC+CGG 0.533445 2.3:+23354481 None:intergenic
CTCGTGAAACTTGGTGCCAA+AGG 0.537833 2.3:-23354578 MS.gene000226:CDS
ACTCCACCGGTCGTTGTTGT+CGG 0.538793 2.3:-23358491 MS.gene000226:CDS
GTCGTTGACACAACCGGAGC+TGG 0.543275 2.3:-23354494 MS.gene000226:CDS
GTAATGGTGTGGTGATGAAA+GGG 0.548075 2.3:+23358664 None:intergenic
GCGGTCAGACGTTAGCCGGC+GGG 0.550446 2.3:-23358397 MS.gene000226:CDS
ACAACCTCCAACTGCTTAGG+TGG 0.553951 2.3:+23356641 None:intergenic
CTGGGATTGTTCTGTTGCAG+AGG 0.554345 2.3:-23356610 MS.gene000226:CDS
TGCTTAGGTGGCAGAGTCTG+AGG 0.557217 2.3:+23356653 None:intergenic
CCGGTGGAGTCTGTGAGGAT+GGG 0.557693 2.3:+23358504 None:intergenic
TCCAGTAATATTTGATGCCG+GGG 0.562776 2.3:-23355582 MS.gene000226:CDS
GCATGACCAGTTGGAGCAGA+AGG 0.567196 2.3:+23356746 None:intergenic
TGGGATTGTTCTGTTGCAGA+GGG 0.568009 2.3:-23356609 MS.gene000226:CDS
GAAGGAAGGCGAAACAATCT+CGG 0.568493 2.3:-23358426 MS.gene000226:CDS
CTCGACGTAAATGTCGGCAT+TGG 0.571729 2.3:+23358463 None:intergenic
AGTTTGGTTGATTTGTAAGG+TGG 0.572728 2.3:+23358642 None:intergenic
CTTGGACTTGCCCTCCACCA+AGG 0.575509 2.3:+23354442 None:intergenic
ATACAGGCCGCAAAGAATGC+TGG 0.580541 2.3:-23355608 MS.gene000226:intron
GGGAGCCATTCCCAGCATGC+CGG 0.582454 2.3:-23354271 MS.gene000226:CDS
GCGGATCCGACAACAACGAC+CGG 0.583456 2.3:+23358485 None:intergenic
TCTGCCACCTAAGCAGTTGG+AGG 0.585246 2.3:-23356645 MS.gene000226:CDS
GTTAATGGGTTTGGATGAAG+TGG 0.586210 2.3:+23358607 None:intergenic
GTCGATCTCGACGTAAATGT+CGG 0.597646 2.3:+23358457 None:intergenic
CTTGAACATTAACAAAATCA+GGG 0.602199 2.3:+23356582 None:intergenic
CCCATCCTCACAGACTCCAC+CGG 0.603573 2.3:-23358504 MS.gene000226:CDS
CGAGATCGACCGCCTCCCGA+AGG 0.605889 2.3:-23358444 MS.gene000226:CDS
CTCGAAGTGCATCGGCGACG+AGG 0.608706 2.3:+23356804 None:intergenic
TCTCATCCGACTTACTTCCT+CGG 0.608832 2.3:-23358338 MS.gene000226:CDS
GTCGCCGATGCACTTCGAGA+CGG 0.611343 2.3:-23356800 MS.gene000226:CDS
GGTGGAGGGCAAGTCCAAGA+AGG 0.612411 2.3:-23354438 MS.gene000226:CDS
TTACAGCGAAACGCAAGACT+GGG 0.617185 2.3:+23358528 None:intergenic
ACCACCGTCTCGAAGTGCAT+CGG 0.618451 2.3:+23356796 None:intergenic
AATAGGTGCATCGATTCCCC+CGG 0.619443 2.3:+23355565 None:intergenic
AAGACATACCGGCAAATCTG+AGG 0.629884 2.3:+23354411 None:intergenic
AGCGGTCAGACGTTAGCCGG+CGG 0.632275 2.3:-23358398 MS.gene000226:CDS
ATAACAACTGCATGACCAGT+TGG 0.632822 2.3:+23356737 None:intergenic
GATTTGGGGTGTTGAATCGA+AGG 0.632949 2.3:+23358573 None:intergenic
TTTGTAAGGTGGTAATGGTG+TGG 0.633183 2.3:+23358653 None:intergenic
GAAACAATCTCGGCGAAAAG+CGG 0.634872 2.3:-23358416 MS.gene000226:CDS
CAGGTTGGGAACGATGCTCA+CGG 0.639205 2.3:-23356830 MS.gene000226:CDS
TTGTTTCGCCTTCCTTCGGG+AGG 0.640370 2.3:+23358432 None:intergenic
GATCCGACAACAACGACCGG+TGG 0.642400 2.3:+23358488 None:intergenic
CCAGTAATATTTGATGCCGG+GGG 0.648025 2.3:-23355581 MS.gene000226:CDS
CAACAGAACAATCCCAGCGG+AGG 0.651935 2.3:+23356616 None:intergenic
TTGATTAGCACCTTTCCCGC+CGG 0.653337 2.3:+23358382 None:intergenic
GCCGATGCACTTCGAGACGG+TGG 0.654538 2.3:-23356797 MS.gene000226:CDS
ACCTGACCGAGGAAGTAAGT+CGG 0.675660 2.3:+23358332 None:intergenic
AGTTGGAGCAGAAGGCACAA+TGG 0.675784 2.3:+23356754 None:intergenic
AACGACCGGTGGAGTCTGTG+AGG 0.677660 2.3:+23358499 None:intergenic
TCTAACTAACAACCTGACCG+AGG 0.687907 2.3:+23358321 None:intergenic
GGTGCTAATCAAGCTTGCTG+TGG 0.692795 2.3:-23358371 MS.gene000226:CDS
CTGCAACAGAACAATCCCAG+CGG 0.770235 2.3:+23356613 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATATAAAATTAGTGTT+TGG - chr2.3:23355650-23355669 MS.gene000226:intron 10.0%
!! ATTTAATTCAATAGTTTAAA+AGG + chr2.3:23358131-23358150 None:intergenic 10.0%
!!! AATATTTGTATTTTTATACT+AGG - chr2.3:23356929-23356948 MS.gene000226:intron 10.0%
!! ATCACAACTAATTCTAATTT+AGG + chr2.3:23355858-23355877 None:intergenic 20.0%
!! ATGCATATTAAAAACGAATA+TGG + chr2.3:23357549-23357568 None:intergenic 20.0%
!! CATGTAAAGTTATTTATGTT+TGG + chr2.3:23356834-23356853 None:intergenic 20.0%
!! CTAATTGAATTTGTAATGTT+TGG - chr2.3:23354764-23354783 MS.gene000226:intron 20.0%
!! GTAACTAATCAAAACTAATT+CGG + chr2.3:23354654-23354673 None:intergenic 20.0%
!! TAAAATCTCACATATTAGTT+AGG + chr2.3:23358579-23358598 None:intergenic 20.0%
!! TACTTTATGATCACTAAATA+AGG - chr2.3:23355955-23355974 MS.gene000226:intron 20.0%
!! TAGTTCAATATTGTTTAATG+TGG - chr2.3:23354625-23354644 MS.gene000226:intron 20.0%
!! TCACAACTAATTCTAATTTA+GGG + chr2.3:23355857-23355876 None:intergenic 20.0%
!! TCTTGTAGATATAAAAGAAA+TGG - chr2.3:23357639-23357658 MS.gene000226:intron 20.0%
!!! AACACAACTAATTTTGATTT+AGG + chr2.3:23355467-23355486 None:intergenic 20.0%
!!! AATTAGTTTTGATTAGTTAC+AGG - chr2.3:23354654-23354673 MS.gene000226:intron 20.0%
!!! ACACAACTAATTTTGATTTA+GGG + chr2.3:23355466-23355485 None:intergenic 20.0%
!!! ATTATTTTATTGAAGTCTAG+TGG - chr2.3:23357167-23357186 MS.gene000226:intron 20.0%
!!! CAAAAAATTCTGAAATTTCA+GGG - chr2.3:23358296-23358315 MS.gene000226:intron 20.0%
!!! TCAAAAAATTCTGAAATTTC+AGG - chr2.3:23358295-23358314 MS.gene000226:intron 20.0%
!!! TGATAAACTAGATGTTTTTA+CGG - chr2.3:23355074-23355093 MS.gene000226:intron 20.0%
!!! TTTTCTCAAAAGAAAATCTA+AGG + chr2.3:23356369-23356388 None:intergenic 20.0%
! AAAAATAACAGTTACCAAAC+AGG - chr2.3:23354944-23354963 MS.gene000226:intron 25.0%
! AAGATACAATGTAAAATCGA+TGG + chr2.3:23358174-23358193 None:intergenic 25.0%
! ACAAAATCCAATAATTCTTG+TGG + chr2.3:23357371-23357390 None:intergenic 25.0%
! ACTTGAACATTAACAAAATC+AGG + chr2.3:23356332-23356351 None:intergenic 25.0%
! AGATATAAAAGAAATGGTCA+TGG - chr2.3:23357645-23357664 MS.gene000226:intron 25.0%
! AGTTGTGTTTAGTTATGATT+AGG - chr2.3:23355478-23355497 MS.gene000226:CDS 25.0%
! ATATAACCAACTTCTACATA+AGG + chr2.3:23355929-23355948 None:intergenic 25.0%
! ATCAAATTAAATGCACCATA+AGG - chr2.3:23357870-23357889 MS.gene000226:intron 25.0%
! ATTAAAAACGAATATGGCAA+TGG + chr2.3:23357543-23357562 None:intergenic 25.0%
! CTACAAATTTATTTGCAACA+CGG + chr2.3:23357098-23357117 None:intergenic 25.0%
! CTTGAACATTAACAAAATCA+GGG + chr2.3:23356331-23356350 None:intergenic 25.0%
! GAATCATAGAAAGAATGATT+TGG + chr2.3:23356019-23356038 None:intergenic 25.0%
! GATTACTTAGAAACTTATAG+TGG - chr2.3:23354717-23354736 MS.gene000226:intron 25.0%
! TTTACCACTGTTATCTTAAT+TGG + chr2.3:23355258-23355277 None:intergenic 25.0%
! TTTGCTAATATAGTATAACC+TGG - chr2.3:23357940-23357959 MS.gene000226:intron 25.0%
!! AATATTTTCTACTGTGAAAC+CGG - chr2.3:23356971-23356990 MS.gene000226:intron 25.0%
!! AATTCTATTGTTATTGTTGG+TGG - chr2.3:23356215-23356234 MS.gene000226:intron 25.0%
!! AGTAGCCTTTAAAAAAAATG+CGG - chr2.3:23355329-23355348 MS.gene000226:intron 25.0%
!! AGTTATGATTAGTTAGAAGT+TGG - chr2.3:23355539-23355558 MS.gene000226:CDS 25.0%
!! CAGAATTCTATTGTTATTGT+TGG - chr2.3:23356212-23356231 MS.gene000226:intron 25.0%
!! CTTCAAATTAGATTCAAGTT+TGG + chr2.3:23356781-23356800 None:intergenic 25.0%
!! TGATTTTGTTAATGTTCAAG+TGG - chr2.3:23356331-23356350 MS.gene000226:intron 25.0%
!! TTTTAATATGCATGCATATG+TGG - chr2.3:23357556-23357575 MS.gene000226:intron 25.0%
!! TTTTCCAATTAAGATAACAG+TGG - chr2.3:23355251-23355270 MS.gene000226:intron 25.0%
!!! AACTAATTTTGATTTAGGGT+CGG + chr2.3:23355462-23355481 None:intergenic 25.0%
!!! GGTGCATTTAATTTGATTTA+AGG + chr2.3:23357867-23357886 None:intergenic 25.0%
AAAAATCCAAAACCCTGTTT+AGG + chr2.3:23357724-23357743 None:intergenic 30.0%
AAGGAATTGGATTGTGTTAA+TGG + chr2.3:23354321-23354340 None:intergenic 30.0%
ACCATAAGGTTAAATTATGG+GGG - chr2.3:23357884-23357903 MS.gene000226:intron 30.0%
ACCTATTCCACAAGAATTAT+TGG - chr2.3:23357361-23357380 MS.gene000226:intron 30.0%
AGCTTATGGTTTATAGCATA+TGG + chr2.3:23354997-23355016 None:intergenic 30.0%
AGGAATTGGATTGTGTTAAT+GGG + chr2.3:23354320-23354339 None:intergenic 30.0%
ATAAGCTAGTGAGAAATTGT+TGG - chr2.3:23355372-23355391 MS.gene000226:intron 30.0%
ATAGTATAACCTGGTACTAT+AGG - chr2.3:23357949-23357968 MS.gene000226:intron 30.0%
ATATGGCTTATAAGCTCATT+TGG + chr2.3:23354980-23354999 None:intergenic 30.0%
ATCTCTTCAAAACTTTCAGT+TGG + chr2.3:23357443-23357462 None:intergenic 30.0%
ATGGTATAGAGAATCATTAG+GGG - chr2.3:23357664-23357683 MS.gene000226:intron 30.0%
ATGTTAGATAAGTGCATGTT+TGG - chr2.3:23356588-23356607 MS.gene000226:CDS 30.0%
CACCATAAGGTTAAATTATG+GGG - chr2.3:23357883-23357902 MS.gene000226:intron 30.0%
CATGGTATAGAGAATCATTA+GGG - chr2.3:23357663-23357682 MS.gene000226:intron 30.0%
CTGTGTAGATAAGAAAGAAA+TGG - chr2.3:23357613-23357632 MS.gene000226:intron 30.0%
GACATAAAATTTGCGATTGT+AGG - chr2.3:23354824-23354843 MS.gene000226:intron 30.0%
GAGACATAAATTTGAGCTTA+TGG + chr2.3:23355011-23355030 None:intergenic 30.0%
GCACCATAAGGTTAAATTAT+GGG - chr2.3:23357882-23357901 MS.gene000226:intron 30.0%
GGTTGTTAGTTAGATATAGT+TGG - chr2.3:23354598-23354617 MS.gene000226:intron 30.0%
TAGTATAACCTGGTACTATA+GGG - chr2.3:23357950-23357969 MS.gene000226:intron 30.0%
TATGATTATGATGACTCTGT+TGG - chr2.3:23355034-23355053 MS.gene000226:intron 30.0%
TCATGGTATAGAGAATCATT+AGG - chr2.3:23357662-23357681 MS.gene000226:intron 30.0%
TCCAATAATTCTTGTGGAAT+AGG + chr2.3:23357365-23357384 None:intergenic 30.0%
TGACATTAAAAGAATCTCAG+TGG - chr2.3:23358249-23358268 MS.gene000226:intron 30.0%
TGATAAGCACAATAAGCTAT+AGG + chr2.3:23355828-23355847 None:intergenic 30.0%
TGCACCATAAGGTTAAATTA+TGG - chr2.3:23357881-23357900 MS.gene000226:intron 30.0%
TTCTTCTCCTTCTATGAAAA+GGG + chr2.3:23358363-23358382 None:intergenic 30.0%
TTGATTGAATTTGTAGTGTC+TGG - chr2.3:23355603-23355622 MS.gene000226:CDS 30.0%
! AATCAAACTTTTGCAAATGG+AGG + chr2.3:23358045-23358064 None:intergenic 30.0%
! CAAATTAGATTCAAGTTTGG+AGG + chr2.3:23356778-23356797 None:intergenic 30.0%
! CGATTTTACATTGTATCTTC+AGG - chr2.3:23358175-23358194 MS.gene000226:intron 30.0%
! CTGAGATTCTTTTAATGTCA+CGG + chr2.3:23358249-23358268 None:intergenic 30.0%
! GTGAGAAATTGTTGGTTAAA+CGG - chr2.3:23355380-23355399 MS.gene000226:intron 30.0%
! TACTTTAGCTCACCAATTTA+TGG + chr2.3:23357487-23357506 None:intergenic 30.0%
! TCTCTATGTGTTCAAGTTAA+GGG - chr2.3:23358619-23358638 MS.gene000226:CDS 30.0%
! TGGAATCAAACTTTTGCAAA+TGG + chr2.3:23358048-23358067 None:intergenic 30.0%
! TGTAGGACACTATTTTCAAA+TGG + chr2.3:23357057-23357076 None:intergenic 30.0%
! TTCTCTATGTGTTCAAGTTA+AGG - chr2.3:23358618-23358637 MS.gene000226:CDS 30.0%
!! AGTTATGATTAGGTTGAAGA+TGG - chr2.3:23355488-23355507 MS.gene000226:CDS 30.0%
!! TATTTTGCTGTGTATCTTCT+TGG - chr2.3:23358530-23358549 MS.gene000226:CDS 30.0%
!! TTGAGTTTGGTTGATTTGTA+AGG + chr2.3:23354274-23354293 None:intergenic 30.0%
!!! AACGACTGTTTTAGCAAAAA+TGG + chr2.3:23358402-23358421 None:intergenic 30.0%
!!! AAGTTTTGAAGAGATTACAC+AGG - chr2.3:23357448-23357467 MS.gene000226:intron 30.0%
!!! AGTTTTGATTAGTTACAGGT+TGG - chr2.3:23354658-23354677 MS.gene000226:intron 30.0%
!!! ATGTTTGGTTTCACTTTTTG+AGG - chr2.3:23356603-23356622 MS.gene000226:CDS 30.0%
!!! GCTTACCGCATTTTTTTTAA+AGG + chr2.3:23355337-23355356 None:intergenic 30.0%
!!! TTTTTTGTGTTGACTGTTGA+GGG - chr2.3:23357751-23357770 MS.gene000226:intron 30.0%
!!! TTTTTTTGTGTTGACTGTTG+AGG - chr2.3:23357750-23357769 MS.gene000226:intron 30.0%
AAAACCCTGTTTAGGAAGTA+AGG + chr2.3:23357716-23357735 None:intergenic 35.0%
AATCTCAGTGGTTACTTATC+TGG - chr2.3:23358261-23358280 MS.gene000226:intron 35.0%
AATGGCCACTTCTTATAAAG+AGG + chr2.3:23357039-23357058 None:intergenic 35.0%
ATACATTCTGCAAGACATAC+CGG + chr2.3:23358513-23358532 None:intergenic 35.0%
ATGTGTGTTTGACTGAGTTT+AGG - chr2.3:23356470-23356489 MS.gene000226:intron 35.0%
ATTCAAGTAGAACATCCGTA+AGG + chr2.3:23357513-23357532 None:intergenic 35.0%
CCAAACACTACAAATTCAAC+TGG + chr2.3:23355158-23355177 None:intergenic 35.0%
CCAGTTGAATTTGTAGTGTT+TGG - chr2.3:23355155-23355174 MS.gene000226:intron 35.0%
CCATAAGGTTAAATTATGGG+GGG - chr2.3:23357885-23357904 MS.gene000226:intron 35.0%
GCGAAGAAATTGATACAATG+AGG + chr2.3:23355986-23356005 None:intergenic 35.0%
GTAGACCTCTTTATAAGAAG+TGG - chr2.3:23357031-23357050 MS.gene000226:intron 35.0%
GTAGTGTCTGGTAAAATTAG+CGG - chr2.3:23355615-23355634 MS.gene000226:intron 35.0%
GTTCCAGTAATATTTGATGC+CGG - chr2.3:23357326-23357345 MS.gene000226:intron 35.0%
GTTCTTCTCCTTCTATGAAA+AGG + chr2.3:23358364-23358383 None:intergenic 35.0%
TAATGCTCTTTACAACCTAC+CGG - chr2.3:23357793-23357812 MS.gene000226:intron 35.0%
TGCTGCAAAATGCCATAAAT+TGG - chr2.3:23357472-23357491 MS.gene000226:intron 35.0%
TGTTAATGTTCAAGTGGCAA+AGG - chr2.3:23356337-23356356 MS.gene000226:intron 35.0%
TTCCAGTAATATTTGATGCC+GGG - chr2.3:23357327-23357346 MS.gene000226:intron 35.0%
TTGGTTAACAAAGACCTGTT+TGG + chr2.3:23354961-23354980 None:intergenic 35.0%
TTGTTATGCTTCAGTCTAGT+GGG - chr2.3:23356189-23356208 MS.gene000226:intron 35.0%
TTTGACAAGCACAATAAAGC+TGG + chr2.3:23355439-23355458 None:intergenic 35.0%
! AGCCAAAATGTATTTTGCTC+TGG - chr2.3:23357276-23357295 MS.gene000226:intron 35.0%
! CACCAGAGCAAAATACATTT+TGG + chr2.3:23357281-23357300 None:intergenic 35.0%
! GCTCTACGCTTTAAGTTATA+AGG - chr2.3:23355683-23355702 MS.gene000226:intron 35.0%
! GTTGATGAGTTAACTGATAG+TGG - chr2.3:23355123-23355142 MS.gene000226:intron 35.0%
! TTACTTCCTAAACAGGGTTT+TGG - chr2.3:23357715-23357734 MS.gene000226:intron 35.0%
! TTGGCTAGTTAAGAATCTTG+CGG + chr2.3:23357262-23357281 None:intergenic 35.0%
!! AGTTAGCCTTATGTAGAAGT+TGG - chr2.3:23355920-23355939 MS.gene000226:intron 35.0%
!! AGTTTGGTTGATTTGTAAGG+TGG + chr2.3:23354271-23354290 None:intergenic 35.0%
!! CTGTTGTGTTTGAGTTTTCT+CGG - chr2.3:23356648-23356667 MS.gene000226:CDS 35.0%
!! GGTGATTTTGTTTGTCGTTT+TGG + chr2.3:23354364-23354383 None:intergenic 35.0%
!! GTTGATTTGTAAGGTGGTAA+TGG + chr2.3:23354265-23354284 None:intergenic 35.0%
!! TGTTGTGTTTGAGTTTTCTC+GGG - chr2.3:23356649-23356668 MS.gene000226:CDS 35.0%
!! TTGGATTGTGTTAATGGGTT+TGG + chr2.3:23354315-23354334 None:intergenic 35.0%
!!! ACTGTTTTAGCAAAAATGGC+AGG + chr2.3:23358398-23358417 None:intergenic 35.0%
!!! AGCTAGTTTTGATCTGGAAA+TGG - chr2.3:23356443-23356462 MS.gene000226:intron 35.0%
!!! GTTTGTCGTTTTGGTGATTT+GGG + chr2.3:23354355-23354374 None:intergenic 35.0%
!!! TGCAATAGCTAGTTTTGATC+TGG - chr2.3:23356437-23356456 MS.gene000226:intron 35.0%
!!! TGTTTGTCGTTTTGGTGATT+TGG + chr2.3:23354356-23354375 None:intergenic 35.0%
!!! TTTGGTTTCACTTTTTGAGG+AGG - chr2.3:23356606-23356625 MS.gene000226:CDS 35.0%
!!! TTTGTCGTTTTGGTGATTTG+GGG + chr2.3:23354354-23354373 None:intergenic 35.0%
AAAAAAAGAGACCAGCACTC+TGG + chr2.3:23357144-23357163 None:intergenic 40.0%
AAAACAGTCGTTGACACAAC+CGG - chr2.3:23358410-23358429 MS.gene000226:CDS 40.0%
AAAATGGCAGGTTGCTGAAT+TGG + chr2.3:23358386-23358405 None:intergenic 40.0%
AAGCAAGTTCTCGTGAAACT+TGG - chr2.3:23358323-23358342 MS.gene000226:intron 40.0%
AATGCTCTTTACAACCTACC+GGG - chr2.3:23357794-23357813 MS.gene000226:intron 40.0%
AATGTTCAAGTGGCAAAGGT+TGG - chr2.3:23356341-23356360 MS.gene000226:intron 40.0%
ATAACAACTGCATGACCAGT+TGG + chr2.3:23356176-23356195 None:intergenic 40.0%
CAGTCTCATGCATACTACAA+TGG + chr2.3:23356897-23356916 None:intergenic 40.0%
CCCCCCATAATTTAACCTTA+TGG + chr2.3:23357888-23357907 None:intergenic 40.0%
CTAGTTAAGAATCTTGCGGA+TGG + chr2.3:23357258-23357277 None:intergenic 40.0%
GGTTAAATTATGGGGGGAAA+AGG - chr2.3:23357891-23357910 MS.gene000226:intron 40.0%
GTTGTTATGCTTCAGTCTAG+TGG - chr2.3:23356188-23356207 MS.gene000226:intron 40.0%
TATGAAAAGGGCAGATCCTT+TGG + chr2.3:23358351-23358370 None:intergenic 40.0%
TCCAGTAATATTTGATGCCG+GGG - chr2.3:23357328-23357347 MS.gene000226:intron 40.0%
TCGAGAACAGATTTCCTATC+CGG + chr2.3:23358661-23358680 None:intergenic 40.0%
TGAGCTAAAGTAGTGCCTTA+CGG - chr2.3:23357495-23357514 MS.gene000226:intron 40.0%
TGTTTGACTGAGTTTAGGAG+AGG - chr2.3:23356475-23356494 MS.gene000226:intron 40.0%
TTTCAGTTGGAAGTCCTGTA+AGG + chr2.3:23357430-23357449 None:intergenic 40.0%
! AAATCTGAGGCATTCCTTCT+TGG + chr2.3:23358489-23358508 None:intergenic 40.0%
! ACTTTTGCAAATGGAGGACA+AGG + chr2.3:23358039-23358058 None:intergenic 40.0%
! GCTACACGCTTTAAGCTATA+AGG - chr2.3:23355299-23355318 MS.gene000226:intron 40.0%
! GTAATGGTGTGGTGATGAAA+GGG + chr2.3:23354249-23354268 None:intergenic 40.0%
! GTAGCCTTACTTCCTAAACA+GGG - chr2.3:23357709-23357728 MS.gene000226:intron 40.0%
! TAGATTCAAGTTTGGAGGCA+AGG + chr2.3:23356773-23356792 None:intergenic 40.0%
! TATTTTGCTCTGGTGCATAC+AGG - chr2.3:23357286-23357305 MS.gene000226:intron 40.0%
!! GGCAGTTTTAGTGCAATAGT+TGG + chr2.3:23358110-23358129 None:intergenic 40.0%
!! GGTAGGTTGTAAAGAGCATT+AGG + chr2.3:23357794-23357813 None:intergenic 40.0%
!! GTGGTGAAAGTGTTTGAGTT+TGG + chr2.3:23354287-23354306 None:intergenic 40.0%
!! GTTAATGGGTTTGGATGAAG+TGG + chr2.3:23354306-23354325 None:intergenic 40.0%
!! TCTCACTGCTTGCTTTTCTT+TGG - chr2.3:23357687-23357706 MS.gene000226:intron 40.0%
!! TTTGTAAGGTGGTAATGGTG+TGG + chr2.3:23354260-23354279 None:intergenic 40.0%
AAGACATACCGGCAAATCTG+AGG + chr2.3:23358502-23358521 None:intergenic 45.0%
AAGGAATGCCTCAGATTTGC+CGG - chr2.3:23358491-23358510 MS.gene000226:CDS 45.0%
ACCATGTGATTGGAGGTTAC+GGG + chr2.3:23358080-23358099 None:intergenic 45.0%
AGATATGAATGCCAGAGTGC+TGG - chr2.3:23357130-23357149 MS.gene000226:intron 45.0%
AGATTGTTTCGCCTTCCTTC+GGG + chr2.3:23354484-23354503 None:intergenic 45.0%
AGGGTTGGACTTGGATATTG+TGG - chr2.3:23357998-23358017 MS.gene000226:intron 45.0%
AGTCCCAACGAAAGTGAACT+TGG - chr2.3:23357401-23357420 MS.gene000226:intron 45.0%
AGTTACCACCATGTGATTGG+AGG + chr2.3:23358087-23358106 None:intergenic 45.0%
AGTTAGTTGGAGAAGCAGAC+TGG - chr2.3:23356998-23357017 MS.gene000226:intron 45.0%
ATGCTCTTTACAACCTACCG+GGG - chr2.3:23357795-23357814 MS.gene000226:intron 45.0%
CACCATGTGATTGGAGGTTA+CGG + chr2.3:23358081-23358100 None:intergenic 45.0%
CACTGATAGCTCGCTTATAG+TGG - chr2.3:23355097-23355116 MS.gene000226:intron 45.0%
CCAGTAATATTTGATGCCGG+GGG - chr2.3:23357329-23357348 MS.gene000226:intron 45.0%
CGACCAAGTTCACTTTCGTT+GGG + chr2.3:23357407-23357426 None:intergenic 45.0%
CGTGAATTCATGACTCGTGT+AGG + chr2.3:23357074-23357093 None:intergenic 45.0%
CTTCTCCAACTAACTGTGTC+CGG + chr2.3:23356993-23357012 None:intergenic 45.0%
GAAACAACCTCCAACTGCTT+AGG + chr2.3:23356275-23356294 None:intergenic 45.0%
GAAACAATCTCGGCGAAAAG+CGG - chr2.3:23354494-23354513 MS.gene000226:CDS 45.0%
GAAGGAAGGCGAAACAATCT+CGG - chr2.3:23354484-23354503 MS.gene000226:CDS 45.0%
GAGATTGTTTCGCCTTCCTT+CGG + chr2.3:23354485-23354504 None:intergenic 45.0%
GATGATTCTCAACGCAGGTT+GGG - chr2.3:23356066-23356085 MS.gene000226:intron 45.0%
GTCGATCTCGACGTAAATGT+CGG + chr2.3:23354456-23354475 None:intergenic 45.0%
GTTAGTTGGAGAAGCAGACT+GGG - chr2.3:23356999-23357018 MS.gene000226:intron 45.0%
TCTAACTAACAACCTGACCG+AGG + chr2.3:23354592-23354611 None:intergenic 45.0%
TCTACGATGATTCTCAACGC+AGG - chr2.3:23356061-23356080 MS.gene000226:intron 45.0%
TCTCATCCGACTTACTTCCT+CGG - chr2.3:23354572-23354591 MS.gene000226:CDS 45.0%
TGAAACCGGACACAGTTAGT+TGG - chr2.3:23356985-23357004 MS.gene000226:intron 45.0%
TGGAACACCAGCATTCTTTG+CGG + chr2.3:23357312-23357331 None:intergenic 45.0%
TGGAGTTACCACCATGTGAT+TGG + chr2.3:23358090-23358109 None:intergenic 45.0%
TGGGATTGTTCTGTTGCAGA+GGG - chr2.3:23356301-23356320 MS.gene000226:intron 45.0%
TTACAGCGAAACGCAAGACT+GGG + chr2.3:23354385-23354404 None:intergenic 45.0%
TTTACAGCGAAACGCAAGAC+TGG + chr2.3:23354386-23354405 None:intergenic 45.0%
! GGATCTGCCCTTTTCATAGA+AGG - chr2.3:23358353-23358372 MS.gene000226:CDS 45.0%
! GGTAATGGTGTGGTGATGAA+AGG + chr2.3:23354250-23354269 None:intergenic 45.0%
! GGTAGCCTTACTTCCTAAAC+AGG - chr2.3:23357708-23357727 MS.gene000226:intron 45.0%
! GTGGTGATGAAAGGGTTGTT+TGG + chr2.3:23354241-23354260 None:intergenic 45.0%
! GTGGTGCTAATGTGAGTTGT+TGG - chr2.3:23356234-23356253 MS.gene000226:intron 45.0%
!! AGTGAAAGTATCACCAGCTC+CGG + chr2.3:23358432-23358451 None:intergenic 45.0%
!! CTTCTCTCCTTACTTTTCCC+CGG + chr2.3:23357815-23357834 None:intergenic 45.0%
!! GATTTGGGGTGTTGAATCGA+AGG + chr2.3:23354340-23354359 None:intergenic 45.0%
!! GGGTGTTGAATCGAAGGAAT+TGG + chr2.3:23354334-23354353 None:intergenic 45.0%
!! GTGTCTTGTTTGATCCCTGA+AGG - chr2.3:23358197-23358216 MS.gene000226:intron 45.0%
!!! TTTCACTGCTGCTTTTGCTG+TGG - chr2.3:23358445-23358464 MS.gene000226:CDS 45.0%
AAAAGCGGTCAGACGTTAGC+CGG - chr2.3:23354509-23354528 MS.gene000226:CDS 50.0%
ACAACCTCCAACTGCTTAGG+TGG + chr2.3:23356272-23356291 None:intergenic 50.0%
ACCCGTAACCTCCAATCACA+TGG - chr2.3:23358076-23358095 MS.gene000226:intron 50.0%
ACCTGACCGAGGAAGTAAGT+CGG + chr2.3:23354581-23354600 None:intergenic 50.0%
AGATTTCCTATCCGGCATGC+TGG + chr2.3:23358653-23358672 None:intergenic 50.0%
AGTGAACTTGGTCGCCTTAC+AGG - chr2.3:23357413-23357432 MS.gene000226:intron 50.0%
ATACAGGCCGCAAAGAATGC+TGG - chr2.3:23357302-23357321 MS.gene000226:intron 50.0%
ATTGTGCCTTCTGCTCCAAC+TGG - chr2.3:23356158-23356177 MS.gene000226:intron 50.0%
CAACCTACCGGGGAAAAGTA+AGG - chr2.3:23357805-23357824 MS.gene000226:intron 50.0%
CCCCCGGCATCAAATATTAC+TGG + chr2.3:23357332-23357351 None:intergenic 50.0%
CGATGATTCTCAACGCAGGT+TGG - chr2.3:23356065-23356084 MS.gene000226:intron 50.0%
CGGGGAAAAGTAAGGAGAGA+AGG - chr2.3:23357813-23357832 MS.gene000226:intron 50.0%
CGTAACCTCCAATCACATGG+TGG - chr2.3:23358079-23358098 MS.gene000226:intron 50.0%
CTCGACGTAAATGTCGGCAT+TGG + chr2.3:23354450-23354469 None:intergenic 50.0%
CTGCAACAGAACAATCCCAG+CGG + chr2.3:23356300-23356319 None:intergenic 50.0%
CTGGGATTGTTCTGTTGCAG+AGG - chr2.3:23356300-23356319 MS.gene000226:intron 50.0%
GATTTCCTATCCGGCATGCT+GGG + chr2.3:23358652-23358671 None:intergenic 50.0%
GCGACCAAGTTCACTTTCGT+TGG + chr2.3:23357408-23357427 None:intergenic 50.0%
GTTTAGGGAAGGGTTGGACT+TGG - chr2.3:23357989-23358008 MS.gene000226:intron 50.0%
TTGATTAGCACCTTTCCCGC+CGG + chr2.3:23354531-23354550 None:intergenic 50.0%
! AGTTGGAGCAGAAGGCACAA+TGG + chr2.3:23356159-23356178 None:intergenic 50.0%
! GACGTAAATGTCGGCATTGG+CGG + chr2.3:23354447-23354466 None:intergenic 50.0%
!! AATAGGTGCATCGATTCCCC+CGG + chr2.3:23357348-23357367 None:intergenic 50.0%
!! CTCGTGAAACTTGGTGCCAA+AGG - chr2.3:23358332-23358351 MS.gene000226:intron 50.0%
!! GAGGTTACGGGTTTGAGTTG+TGG + chr2.3:23358068-23358087 None:intergenic 50.0%
!! GGTGCTAATCAAGCTTGCTG+TGG - chr2.3:23354539-23354558 MS.gene000226:CDS 50.0%
!! TCTCCTTACTTTTCCCCGGT+AGG + chr2.3:23357811-23357830 None:intergenic 50.0%
ACCACCGTCTCGAAGTGCAT+CGG + chr2.3:23356117-23356136 None:intergenic 55.0%
ACTCCACCGGTCGTTGTTGT+CGG - chr2.3:23354419-23354438 MS.gene000226:intron 55.0%
AGAAGCTGCAGCAGCTGTTG+TGG + chr2.3:23358602-23358621 None:intergenic 55.0%
CAACAGAACAATCCCAGCGG+AGG + chr2.3:23356297-23356316 None:intergenic 55.0%
CACTTCGAGACGGTGGTGTT+CGG - chr2.3:23356120-23356139 MS.gene000226:intron 55.0%
CCATGGTGCGGTTTAGGGAA+GGG - chr2.3:23357979-23357998 MS.gene000226:intron 55.0%
GACTCTGCCACCTAAGCAGT+TGG - chr2.3:23356262-23356281 MS.gene000226:intron 55.0%
GCATGACCAGTTGGAGCAGA+AGG + chr2.3:23356167-23356186 None:intergenic 55.0%
TCCGACTTACTTCCTCGGTC+AGG - chr2.3:23354577-23354596 MS.gene000226:CDS 55.0%
TCTGCCACCTAAGCAGTTGG+AGG - chr2.3:23356265-23356284 MS.gene000226:intron 55.0%
TGCTTAGGTGGCAGAGTCTG+AGG + chr2.3:23356260-23356279 None:intergenic 55.0%
TTGTTTCGCCTTCCTTCGGG+AGG + chr2.3:23354481-23354500 None:intergenic 55.0%
! CAGGTTGGGAACGATGCTCA+CGG - chr2.3:23356080-23356099 MS.gene000226:intron 55.0%
! TGGAGGTTGTTTCCTCCGCT+GGG - chr2.3:23356282-23356301 MS.gene000226:intron 55.0%
! TTGGAGGTTGTTTCCTCCGC+TGG - chr2.3:23356281-23356300 MS.gene000226:intron 55.0%
! TTTGCTGTGGCCTTGGTGGA+GGG - chr2.3:23358458-23358477 MS.gene000226:CDS 55.0%
!! TGCTTTTGCTGTGGCCTTGG+TGG - chr2.3:23358454-23358473 MS.gene000226:CDS 55.0%
!! TTTTGCTGTGGCCTTGGTGG+AGG - chr2.3:23358457-23358476 MS.gene000226:CDS 55.0%
!!! TGCTGCTTTTGCTGTGGCCT+TGG - chr2.3:23358451-23358470 MS.gene000226:CDS 55.0%
AACGACCGGTGGAGTCTGTG+AGG + chr2.3:23354414-23354433 None:intergenic 60.0%
ACCGGTGGAGTCTGTGAGGA+TGG + chr2.3:23354410-23354429 None:intergenic 60.0%
CCATTCCCAGCATGCCGGAT+AGG - chr2.3:23358644-23358663 MS.gene000226:CDS 60.0%
CCCATCCTCACAGACTCCAC+CGG - chr2.3:23354406-23354425 MS.gene000226:intron 60.0%
CCCTAAACCGCACCATGGCA+GGG + chr2.3:23357977-23357996 None:intergenic 60.0%
CCCTGCCATGGTGCGGTTTA+GGG - chr2.3:23357974-23357993 MS.gene000226:intron 60.0%
CCCTTCCCTAAACCGCACCA+TGG + chr2.3:23357982-23358001 None:intergenic 60.0%
CCGGTGGAGTCTGTGAGGAT+GGG + chr2.3:23354409-23354428 None:intergenic 60.0%
CCTAAACCGCACCATGGCAG+GGG + chr2.3:23357976-23357995 None:intergenic 60.0%
CCTATCCGGCATGCTGGGAA+TGG + chr2.3:23358647-23358666 None:intergenic 60.0%
CTTGGACTTGCCCTCCACCA+AGG + chr2.3:23358471-23358490 None:intergenic 60.0%
GATCCGACAACAACGACCGG+TGG + chr2.3:23354425-23354444 None:intergenic 60.0%
GCCATGGTGCGGTTTAGGGA+AGG - chr2.3:23357978-23357997 MS.gene000226:intron 60.0%
GCGGATCCGACAACAACGAC+CGG + chr2.3:23354428-23354447 None:intergenic 60.0%
GGTGCGGTTTAGGGAAGGGT+TGG - chr2.3:23357983-23358002 MS.gene000226:intron 60.0%
GGTGGAGGGCAAGTCCAAGA+AGG - chr2.3:23358472-23358491 MS.gene000226:CDS 60.0%
GTACTATAGGGCCCCTGCCA+TGG - chr2.3:23357962-23357981 MS.gene000226:intron 60.0%
GTCGCCGATGCACTTCGAGA+CGG - chr2.3:23356110-23356129 MS.gene000226:intron 60.0%
GTCGTTGACACAACCGGAGC+TGG - chr2.3:23358416-23358435 MS.gene000226:CDS 60.0%
TCCCTAAACCGCACCATGGC+AGG + chr2.3:23357978-23357997 None:intergenic 60.0%
TTTCGCCTTCCTTCGGGAGG+CGG + chr2.3:23354478-23354497 None:intergenic 60.0%
AGCGGTCAGACGTTAGCCGG+CGG - chr2.3:23354512-23354531 MS.gene000226:CDS 65.0%
ATAGGGCCCCTGCCATGGTG+CGG - chr2.3:23357967-23357986 MS.gene000226:intron 65.0%
ATCGACCGCCTCCCGAAGGA+AGG - chr2.3:23354470-23354489 MS.gene000226:CDS 65.0%
CAGACGTTAGCCGGCGGGAA+AGG - chr2.3:23354518-23354537 MS.gene000226:CDS 65.0%
CCCCTGCCATGGTGCGGTTT+AGG - chr2.3:23357973-23357992 MS.gene000226:intron 65.0%
GCCGATGCACTTCGAGACGG+TGG - chr2.3:23356113-23356132 MS.gene000226:intron 65.0%
GGCAGGGGCCCTATAGTACC+AGG + chr2.3:23357961-23357980 None:intergenic 65.0%
GGGAGCCATTCCCAGCATGC+CGG - chr2.3:23358639-23358658 MS.gene000226:CDS 65.0%
! CTCGAAGTGCATCGGCGACG+AGG + chr2.3:23356109-23356128 None:intergenic 65.0%
CGAGATCGACCGCCTCCCGA+AGG - chr2.3:23354466-23354485 MS.gene000226:CDS 70.0%
GCGGTCAGACGTTAGCCGGC+GGG - chr2.3:23354513-23354532 MS.gene000226:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 23354233 23358699 23354233 ID=MS.gene000226
chr2.3 mRNA 23354233 23358699 23354233 ID=MS.gene000226.t1;Parent=MS.gene000226
chr2.3 exon 23358334 23358699 23358334 ID=MS.gene000226.t1.exon1;Parent=MS.gene000226.t1
chr2.3 CDS 23358334 23358699 23358334 ID=cds.MS.gene000226.t1;Parent=MS.gene000226.t1
chr2.3 exon 23356574 23356849 23356574 ID=MS.gene000226.t1.exon2;Parent=MS.gene000226.t1
chr2.3 CDS 23356574 23356849 23356574 ID=cds.MS.gene000226.t1;Parent=MS.gene000226.t1
chr2.3 exon 23355439 23355624 23355439 ID=MS.gene000226.t1.exon3;Parent=MS.gene000226.t1
chr2.3 CDS 23355439 23355624 23355439 ID=cds.MS.gene000226.t1;Parent=MS.gene000226.t1
chr2.3 exon 23354420 23354615 23354420 ID=MS.gene000226.t1.exon4;Parent=MS.gene000226.t1
chr2.3 CDS 23354420 23354615 23354420 ID=cds.MS.gene000226.t1;Parent=MS.gene000226.t1
chr2.3 exon 23354233 23354324 23354233 ID=MS.gene000226.t1.exon5;Parent=MS.gene000226.t1
chr2.3 CDS 23354233 23354324 23354233 ID=cds.MS.gene000226.t1;Parent=MS.gene000226.t1
Gene Sequence

>MS.gene000226

ATGAACCAAACAACCCTTTCATCACCACACCATTACCACCTTACAAATCAACCAAACTCAAACACTTTCACCACTTCATCCAAACCCATTAACACAATCCAATTCCTTCGATTCAACACCCCAAATCACCAAAACGACAAACAAAATCACCCAGTCTTGCGTTTCGCTGTAAACCCATCCTCACAGACTCCACCGGTCGTTGTTGTCGGATCCGCCAATGCCGACATTTACGTCGAGATCGACCGCCTCCCGAAGGAAGGCGAAACAATCTCGGCGAAAAGCGGTCAGACGTTAGCCGGCGGGAAAGGTGCTAATCAAGCTTGCTGTGGTGCTAAATTATCTCATCCGACTTACTTCCTCGGTCAGGTTGTTAGTTAGATATAGTTGGATATTAGTTCAATATTGTTTAATGTGGTTTCCGAATTAGTTTTGATTAGTTACAGGTTGGTTATATTAGTAGTTTACTTATAGTGTGATTAGTTATGATTACTTAGAAACTTATAGTGGATGAGCTTATAGCAGATAAGCTAACTAATTGAATTTGTAATGTTTGGTAAAATTAGCAATTAAAGTAGCTTGCAAATATGAAATGACATAAAATTTGCGATTGTAGGAGTAAGATTGAGATAAAACGTAATGAGCTATAAGCTTTAAGCTATAATCTACTTGAATTAGCTATAAGCTCATAAAAAATAAGCTATAAGATCATTTAAAAATAACAGTTACCAAACAGGTCTTTGTTAACCAAATGAGCTTATAAGCCATATGCTATAAACCATAAGCTCAAATTTATGTCTCAGTTATGATTATGATGACTCTGTTGGTAAAAATAGCTACTAACTGATAAACTAGATGTTTTTACGGCACTGATAGCTCGCTTATAGTGGATTGTTGATGAGTTAACTGATAGTGGATAAGCTAGCCAGTTGAATTTGTAGTGTTTGGTAAAATTAGCAGTTGAGTTTGAAATAGATTATAAATATGAAAAGACGTAAAAATGATATATTTAATTTATTTTTTTTCCAATTAAGATAACAGTGGTAAAACTTGATAGAAAAAATGTTAAGCTACACGCTTTAAGCTATAAGGTACTTCAAGTAGCCTTTAAAAAAAATGCGGTAAGCTAGTAAAAATAATCTATAAGCTAGTGAGAAATTGTTGGTTAAACGGTACTATTTTAGTCATATGATTATAAGCTATCAGCCAGCTTTATTGTGCTTGTCAAACCGACCCTAAATCAAAATTAGTTGTGTTTAGTTATGATTAGGTTGAAGATGGTTATATTAGTTTACTGATTAGTGTGATTAGTTATGATTAGTTAGAAGTTGGTTATATTAGTTATACTTTATTGTTGATATCATGTAAATTAGTTGATTGAATTTGTAGTGTCTGGTAAAATTAGCGGTTGAGTTAACTTATAAATATAAAATTAGTGTTTGGTAAAATATAAGCTCTACGCTTTAAGTTATAAGGTACTTGAAGTAGCTTATCAAAACATGTTGTAAGCTATTAAAAATAAGCTGTAAGCTAGTGAGAAAATGACGATTATCAAACAAGACTTTTTTTAGTCATACGAGCTTATAAGCTATAAGCCTATAGCTTATTGTGCTTATCAAACAGACCCTAAATTAGAATTAGTTGTGATTAATTAGAAGTTTGTTGTATTAGTCTACGAATTAGTGTGATTAGTTAGCCTTATGTAGAAGTTGGTTATATTAGTTATACTTTATGATCACTAAATAAGGTGCATCCTCATTGTATCAATTTCTTCGCGTATCAATTTCCAAATCATTCTTTCTATGATTCTTATATTTTGCTTTATTTTTGTTCTACGATGATTCTCAACGCAGGTTGGGAACGATGCTCACGGAAACCTCGTCGCCGATGCACTTCGAGACGGTGGTGTTCGGCTTGATTATCTTGCCATTGTGCCTTCTGCTCCAACTGGTCATGCAGTTGTTATGCTTCAGTCTAGTGGGCAGAATTCTATTGTTATTGTTGGTGGTGCTAATGTGAGTTGTTGGCCTCAGACTCTGCCACCTAAGCAGTTGGAGGTTGTTTCCTCCGCTGGGATTGTTCTGTTGCAGAGGGAGATCCCTGATTTTGTTAATGTTCAAGTGGCAAAGGTTGGTACCTTAGATTTTCTTTTGAGAAAATGTGAAATTGTCTTATTTTTTATTTTATTTTTACTTTTTGTTGACAATTGCAATAGCTAGTTTTGATCTGGAAATGGAATCATGTGTGTTTGACTGAGTTTAGGAGAGGTTAATTTGAATAGAATTGATTTTGTAGATATGATTATGTTAAAACTGAGTTTGAAGTGATCTATTGTTGAACATTTCTTCAAAATTGATTATGTTAGATAAGTGCATGTTTGGTTTCACTTTTTGAGGAGGCAAAATTGATTGAATCATACTGTTGTGTTTGAGTTTTCTCGGTTGATTATGTTAGATAAGTGCATGTTTGGTTTCACTTTTTGAGGAGGCAAAATTGATTGAATCATACTGTTGTGTTTGAGTTTTCTCGGGTGATGTTGACCTTGCCTCCAAACTTGAATCTAATTTGAAGCTGAGATTTGAAATTTTTGTAATTTTGCTTCCAAACATAAATAACTTTACATGCAATTTAATAAAAATGAAATTTATTCAAAATTAATTTTCACCATTGTAGTATGCATGAGACTGAGAGTAACAAAAAATATTTGTATTTTTATACTAGGCAGAAGTACAATTAATTCTAATATTTTCTACTGTGAAACCGGACACAGTTAGTTGGAGAAGCAGACTGGGAGTGATTTTGTAGACCTCTTTATAAGAAGTGGCCATTTGAAAATAGTGTCCTACACGAGTCATGAATTCACGACCGTGTTGCAAATAAATTTGTAGTGTATTTGCTTCAGATATGAATGCCAGAGTGCTGGTCTCTTTTTTTATAATTATTTTATTGAAGTCTAGTGGAGAAACTTATCTGCTATGCACTTCGTACGATGATTATATGATATGTTTCACGTGAATTACATGTTCCATCCGCAAGATTCTTAACTAGCCAAAATGTATTTTGCTCTGGTGCATACAGGCCGCAAAGAATGCTGGTGTTCCAGTAATATTTGATGCCGGGGGAATCGATGCACCTATTCCACAAGAATTATTGGATTTTGTTGATATTTTTAGTCCCAACGAAAGTGAACTTGGTCGCCTTACAGGACTTCCAACTGAAAGTTTTGAAGAGATTACACAGGCTGCTGCAAAATGCCATAAATTGGTGAGCTAAAGTAGTGCCTTACGGATGTTCTACTTGAATGCTATATCCATTGCCATATTCGTTTTTAATATGCATGCATATGTGGCATTAGAAGTGTCACAGCAGAAAAAAAACAATATCTGTGTAGATAAGAAAGAAATGGTCTTCTTGTAGATATAAAAGAAATGGTCATGGTATAGAGAATCATTAGGGGTCTCACTGCTTGCTTTTCTTTGGTAGCCTTACTTCCTAAACAGGGTTTTGGATTTTTTTTTTTTTTTTTTGTGTTGACTGTTGAGGGAAATATAGCTGTTTTGTCCTAATGCTCTTTACAACCTACCGGGGAAAAGTAAGGAGAGAAGGATTATAATTTTGATTTGACGCACTTTTTCCTTAAATCAAATTAAATGCACCATAAGGTTAAATTATGGGGGGAAAAGGTAACTAGTAACAAATAAACTATTGAATTTGCTAATATAGTATAACCTGGTACTATAGGGCCCCTGCCATGGTGCGGTTTAGGGAAGGGTTGGACTTGGATATTGTGGATCTATTGTAGACATCCTTGTCCTCCATTTGCAAAAGTTTGATTCCACAACTCAAACCCGTAACCTCCAATCACATGGTGGTAACTCCAACTATTGCACTAAAACTGCCTTTTAAACTATTGAATTAAATTTTTCTATTTATTGACTGTGCCATCGATTTTACATTGTATCTTCAGGTGTCTTGTTTGATCCCTGAAGGCTTGTAGATTGATGTTGCTTTTGTCTCCGTGACATTAAAAGAATCTCAGTGGTTACTTATCTGGCGTTTTCTTAATCAAAAAATTCTGAAATTTCAGGGTGTTAAGCAAGTTCTCGTGAAACTTGGTGCCAAAGGATCTGCCCTTTTCATAGAAGGAGAAGAACCAATTCAGCAACCTGCCATTTTTGCTAAAACAGTCGTTGACACAACCGGAGCTGGTGATACTTTCACTGCTGCTTTTGCTGTGGCCTTGGTGGAGGGCAAGTCCAAGAAGGAATGCCTCAGATTTGCCGGTATGTCTTGCAGAATGTATTTTGCTGTGTATCTTCTTGGACTTTTCTCTGTTGAAAAATGTGCCTAACTAATATGTGAGATTTTACCACAACAGCTGCTGCAGCTTCTCTATGTGTTCAAGTTAAGGGAGCCATTCCCAGCATGCCGGATAGGAAATCTGTTCTCGAACTTCTTAATCATCATTGA
Protein sequence

>MS.gene000226.t1

MNQTTLSSPHHYHLTNQPNSNTFTTSSKPINTIQFLRFNTPNHQNDKQNHPVLRFAVNPSSQTPPVVVVGSANADIYVEIDRLPKEGETISAKSGQTLAGGKGANQACCGAKLSHPTYFLGQVGNDAHGNLVADALRDGGVRLDYLAIVPSAPTGHAVVMLQSSGQNSIVIVGGANVSCWPQTLPPKQLEVVSSAGIVLLQREIPDFVNVQVAKAAKNAGVPVIFDAGGIDAPIPQELLDFVDIFSPNESELGRLTGLPTESFEEITQAAAKCHKLGVKQVLVKLGAKGSALFIEGEEPIQQPAIFAKTVVDTTGAGDTFTAAFAVALVEGKSKKECLRFAAAAASLCVQVKGAIPSMPDRKSVLELLNHH