Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85276.t1 | XP_003597523.1 | 98.5 | 329 | 5 | 0 | 1 | 329 | 1 | 329 | 4.10E-180 | 640.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85276.t1 | Q9M1B9 | 82.9 | 328 | 52 | 1 | 1 | 328 | 1 | 324 | 4.7e-153 | 542.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85276.t1 | G7IHV2 | 98.5 | 329 | 5 | 0 | 1 | 329 | 1 | 329 | 2.9e-180 | 640.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049134 | MS.gene85276 | 0.811163 | 8.03E-51 | -1.69E-46 |
| MS.gene049149 | MS.gene85276 | -0.807845 | 4.14E-50 | -1.69E-46 |
| MS.gene049150 | MS.gene85276 | -0.813848 | 2.08E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene85276 | -0.815017 | 1.15E-51 | -1.69E-46 |
| MS.gene049170 | MS.gene85276 | -0.803177 | 3.95E-49 | -1.69E-46 |
| MS.gene04933 | MS.gene85276 | -0.827187 | 1.80E-54 | -1.69E-46 |
| MS.gene049346 | MS.gene85276 | -0.817773 | 2.77E-52 | -1.69E-46 |
| MS.gene049351 | MS.gene85276 | -0.820682 | 6.03E-53 | -1.69E-46 |
| MS.gene049378 | MS.gene85276 | -0.80355 | 3.31E-49 | -1.69E-46 |
| MS.gene049910 | MS.gene85276 | -0.811295 | 7.52E-51 | -1.69E-46 |
| MS.gene049993 | MS.gene85276 | -0.889345 | 2.63E-73 | -1.69E-46 |
| MS.gene050133 | MS.gene85276 | 0.839324 | 1.70E-57 | -1.69E-46 |
| MS.gene050168 | MS.gene85276 | -0.801539 | 8.58E-49 | -1.69E-46 |
| MS.gene050227 | MS.gene85276 | -0.801529 | 8.63E-49 | -1.69E-46 |
| MS.gene050301 | MS.gene85276 | -0.824422 | 8.14E-54 | -1.69E-46 |
| MS.gene050315 | MS.gene85276 | -0.8179 | 2.59E-52 | -1.69E-46 |
| MS.gene050397 | MS.gene85276 | -0.847618 | 1.03E-59 | -1.69E-46 |
| MS.gene050400 | MS.gene85276 | -0.826292 | 2.94E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene85276 | 0.905073 | 6.30E-80 | -1.69E-46 |
| MS.gene050464 | MS.gene85276 | -0.835894 | 1.29E-56 | -1.69E-46 |
| MS.gene050529 | MS.gene85276 | -0.827185 | 1.80E-54 | -1.69E-46 |
| MS.gene050640 | MS.gene85276 | -0.804115 | 2.52E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene85276 | -0.842838 | 2.02E-58 | -1.69E-46 |
| MS.gene050650 | MS.gene85276 | -0.846737 | 1.80E-59 | -1.69E-46 |
| MS.gene050670 | MS.gene85276 | -0.878914 | 1.91E-69 | -1.69E-46 |
| MS.gene050787 | MS.gene85276 | -0.802987 | 4.32E-49 | -1.69E-46 |
| MS.gene050971 | MS.gene85276 | -0.839845 | 1.24E-57 | -1.69E-46 |
| MS.gene05105 | MS.gene85276 | -0.805729 | 1.16E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene85276 | -0.918072 | 2.45E-86 | -1.69E-46 |
| MS.gene051552 | MS.gene85276 | 0.811724 | 6.07E-51 | -1.69E-46 |
| MS.gene051582 | MS.gene85276 | -0.865805 | 4.52E-65 | -1.69E-46 |
| MS.gene051588 | MS.gene85276 | -0.825177 | 5.40E-54 | -1.69E-46 |
| MS.gene051860 | MS.gene85276 | -0.856271 | 3.60E-62 | -1.69E-46 |
| MS.gene051983 | MS.gene85276 | -0.853098 | 2.99E-61 | -1.69E-46 |
| MS.gene052011 | MS.gene85276 | 0.997207 | 1.35E-238 | -1.69E-46 |
| MS.gene052077 | MS.gene85276 | -0.860469 | 2.02E-63 | -1.69E-46 |
| MS.gene052128 | MS.gene85276 | 0.829239 | 5.75E-55 | -1.69E-46 |
| MS.gene052134 | MS.gene85276 | -0.826418 | 2.74E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene85276 | -0.830864 | 2.31E-55 | -1.69E-46 |
| MS.gene052188 | MS.gene85276 | -0.836691 | 8.07E-57 | -1.69E-46 |
| MS.gene052223 | MS.gene85276 | 0.815774 | 7.78E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene85276 | -0.892433 | 1.60E-74 | -1.69E-46 |
| MS.gene052310 | MS.gene85276 | -0.802044 | 6.76E-49 | -1.69E-46 |
| MS.gene05233 | MS.gene85276 | 0.808959 | 2.40E-50 | -1.69E-46 |
| MS.gene052340 | MS.gene85276 | -0.835272 | 1.85E-56 | -1.69E-46 |
| MS.gene052389 | MS.gene85276 | -0.817872 | 2.63E-52 | -1.69E-46 |
| MS.gene052414 | MS.gene85276 | -0.813422 | 2.58E-51 | -1.69E-46 |
| MS.gene052469 | MS.gene85276 | -0.805335 | 1.40E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene85276 | -0.804486 | 2.11E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene85276 | -0.808414 | 3.13E-50 | -1.69E-46 |
| MS.gene052505 | MS.gene85276 | -0.80221 | 6.25E-49 | -1.69E-46 |
| MS.gene052589 | MS.gene85276 | -0.81427 | 1.68E-51 | -1.69E-46 |
| MS.gene052590 | MS.gene85276 | -0.802881 | 4.54E-49 | -1.69E-46 |
| MS.gene052982 | MS.gene85276 | -0.818022 | 2.43E-52 | -1.69E-46 |
| MS.gene053169 | MS.gene85276 | -0.82389 | 1.09E-53 | -1.69E-46 |
| MS.gene053176 | MS.gene85276 | -0.82006 | 8.37E-53 | -1.69E-46 |
| MS.gene053330 | MS.gene85276 | -0.84802 | 8.00E-60 | -1.69E-46 |
| MS.gene053758 | MS.gene85276 | -0.802039 | 6.78E-49 | -1.69E-46 |
| MS.gene053836 | MS.gene85276 | -0.84269 | 2.22E-58 | -1.69E-46 |
| MS.gene053873 | MS.gene85276 | -0.823204 | 1.57E-53 | -1.69E-46 |
| MS.gene053928 | MS.gene85276 | -0.826602 | 2.48E-54 | -1.69E-46 |
| MS.gene054010 | MS.gene85276 | -0.828207 | 1.02E-54 | -1.69E-46 |
| MS.gene054011 | MS.gene85276 | -0.837854 | 4.06E-57 | -1.69E-46 |
| MS.gene054012 | MS.gene85276 | -0.836086 | 1.15E-56 | -1.69E-46 |
| MS.gene054013 | MS.gene85276 | -0.826475 | 2.66E-54 | -1.69E-46 |
| MS.gene054102 | MS.gene85276 | -0.829971 | 3.82E-55 | -1.69E-46 |
| MS.gene054107 | MS.gene85276 | -0.808099 | 3.66E-50 | -1.69E-46 |
| MS.gene054110 | MS.gene85276 | -0.817995 | 2.47E-52 | -1.69E-46 |
| MS.gene054173 | MS.gene85276 | -0.804453 | 2.14E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene85276 | -0.929455 | 6.78E-93 | -1.69E-46 |
| MS.gene054349 | MS.gene85276 | -0.856524 | 3.04E-62 | -1.69E-46 |
| MS.gene054473 | MS.gene85276 | -0.821446 | 4.02E-53 | -1.69E-46 |
| MS.gene054548 | MS.gene85276 | -0.810233 | 1.28E-50 | -1.69E-46 |
| MS.gene054556 | MS.gene85276 | -0.862996 | 3.41E-64 | -1.69E-46 |
| MS.gene054719 | MS.gene85276 | -0.885849 | 5.70E-72 | -1.69E-46 |
| MS.gene054918 | MS.gene85276 | -0.814897 | 1.22E-51 | -1.69E-46 |
| MS.gene054920 | MS.gene85276 | -0.859485 | 4.00E-63 | -1.69E-46 |
| MS.gene054983 | MS.gene85276 | -0.842104 | 3.17E-58 | -1.69E-46 |
| MS.gene055116 | MS.gene85276 | -0.845289 | 4.46E-59 | -1.69E-46 |
| MS.gene055157 | MS.gene85276 | 0.809882 | 1.52E-50 | -1.69E-46 |
| MS.gene055217 | MS.gene85276 | -0.841893 | 3.60E-58 | -1.69E-46 |
| MS.gene055277 | MS.gene85276 | -0.820035 | 8.49E-53 | -1.69E-46 |
| MS.gene055358 | MS.gene85276 | -0.802173 | 6.36E-49 | -1.69E-46 |
| MS.gene055369 | MS.gene85276 | -0.86215 | 6.21E-64 | -1.69E-46 |
| MS.gene055428 | MS.gene85276 | -0.807046 | 6.12E-50 | -1.69E-46 |
| MS.gene055488 | MS.gene85276 | 0.818117 | 2.32E-52 | -1.69E-46 |
| MS.gene055539 | MS.gene85276 | -0.817316 | 3.51E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene85276 | -0.887062 | 1.98E-72 | -1.69E-46 |
| MS.gene05556 | MS.gene85276 | -0.82109 | 4.86E-53 | -1.69E-46 |
| MS.gene055601 | MS.gene85276 | 0.820446 | 6.83E-53 | -1.69E-46 |
| MS.gene055604 | MS.gene85276 | -0.844122 | 9.19E-59 | -1.69E-46 |
| MS.gene05569 | MS.gene85276 | -0.804499 | 2.10E-49 | -1.69E-46 |
| MS.gene055741 | MS.gene85276 | -0.804527 | 2.07E-49 | -1.69E-46 |
| MS.gene055744 | MS.gene85276 | -0.818158 | 2.27E-52 | -1.69E-46 |
| MS.gene05594 | MS.gene85276 | -0.838233 | 3.25E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene85276 | -0.828432 | 9.02E-55 | -1.69E-46 |
| MS.gene056297 | MS.gene85276 | -0.83404 | 3.77E-56 | -1.69E-46 |
| MS.gene056330 | MS.gene85276 | 0.825001 | 5.94E-54 | -1.69E-46 |
| MS.gene056337 | MS.gene85276 | -0.821342 | 4.25E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene85276 | -0.822899 | 1.85E-53 | -1.69E-46 |
| MS.gene056514 | MS.gene85276 | -0.859708 | 3.43E-63 | -1.69E-46 |
| MS.gene056612 | MS.gene85276 | -0.806642 | 7.45E-50 | -1.69E-46 |
| MS.gene056633 | MS.gene85276 | -0.804483 | 2.11E-49 | -1.69E-46 |
| MS.gene056659 | MS.gene85276 | -0.851179 | 1.05E-60 | -1.69E-46 |
| MS.gene056691 | MS.gene85276 | 0.809709 | 1.65E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene85276 | -0.885951 | 5.22E-72 | -1.69E-46 |
| MS.gene056782 | MS.gene85276 | -0.816913 | 4.33E-52 | -1.69E-46 |
| MS.gene056877 | MS.gene85276 | -0.801705 | 7.94E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene85276 | 0.872552 | 2.91E-67 | -1.69E-46 |
| MS.gene056902 | MS.gene85276 | -0.822163 | 2.74E-53 | -1.69E-46 |
| MS.gene056920 | MS.gene85276 | 0.802122 | 6.52E-49 | -1.69E-46 |
| MS.gene056924 | MS.gene85276 | 0.809292 | 2.03E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene85276 | -0.847874 | 8.77E-60 | -1.69E-46 |
| MS.gene05702 | MS.gene85276 | -0.827597 | 1.43E-54 | -1.69E-46 |
| MS.gene057121 | MS.gene85276 | -0.834036 | 3.78E-56 | -1.69E-46 |
| MS.gene057124 | MS.gene85276 | -0.831351 | 1.75E-55 | -1.69E-46 |
| MS.gene057396 | MS.gene85276 | -0.842612 | 2.32E-58 | -1.69E-46 |
| MS.gene057469 | MS.gene85276 | -0.828991 | 6.61E-55 | -1.69E-46 |
| MS.gene057476 | MS.gene85276 | -0.896839 | 2.51E-76 | -1.69E-46 |
| MS.gene057749 | MS.gene85276 | -0.857138 | 2.00E-62 | -1.69E-46 |
| MS.gene057823 | MS.gene85276 | -0.846129 | 2.64E-59 | -1.69E-46 |
| MS.gene057825 | MS.gene85276 | -0.829288 | 5.60E-55 | -1.69E-46 |
| MS.gene057833 | MS.gene85276 | -0.809399 | 1.93E-50 | -1.69E-46 |
| MS.gene057843 | MS.gene85276 | -0.802205 | 6.27E-49 | -1.69E-46 |
| MS.gene057888 | MS.gene85276 | -0.856514 | 3.06E-62 | -1.69E-46 |
| MS.gene058002 | MS.gene85276 | -0.836458 | 9.25E-57 | -1.69E-46 |
| MS.gene058007 | MS.gene85276 | -0.835713 | 1.43E-56 | -1.69E-46 |
| MS.gene05811 | MS.gene85276 | -0.850428 | 1.71E-60 | -1.69E-46 |
| MS.gene058142 | MS.gene85276 | -0.855664 | 5.42E-62 | -1.69E-46 |
| MS.gene058218 | MS.gene85276 | 0.808832 | 2.55E-50 | -1.69E-46 |
| MS.gene058220 | MS.gene85276 | -0.811147 | 8.09E-51 | -1.69E-46 |
| MS.gene058233 | MS.gene85276 | -0.838243 | 3.23E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene85276 | -0.817492 | 3.21E-52 | -1.69E-46 |
| MS.gene058376 | MS.gene85276 | -0.818297 | 2.11E-52 | -1.69E-46 |
| MS.gene058444 | MS.gene85276 | -0.863694 | 2.07E-64 | -1.69E-46 |
| MS.gene058700 | MS.gene85276 | -0.850417 | 1.72E-60 | -1.69E-46 |
| MS.gene058710 | MS.gene85276 | -0.84246 | 2.55E-58 | -1.69E-46 |
| MS.gene058739 | MS.gene85276 | -0.814013 | 1.91E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene85276 | -0.866437 | 2.85E-65 | -1.69E-46 |
| MS.gene058885 | MS.gene85276 | -0.811655 | 6.28E-51 | -1.69E-46 |
| MS.gene059011 | MS.gene85276 | -0.86931 | 3.41E-66 | -1.69E-46 |
| MS.gene059043 | MS.gene85276 | 0.816279 | 6.00E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene85276 | -0.8579 | 1.19E-62 | -1.69E-46 |
| MS.gene059082 | MS.gene85276 | -0.844174 | 8.90E-59 | -1.69E-46 |
| MS.gene059141 | MS.gene85276 | -0.821549 | 3.81E-53 | -1.69E-46 |
| MS.gene059247 | MS.gene85276 | -0.824883 | 6.34E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene85276 | -0.813975 | 1.95E-51 | -1.69E-46 |
| MS.gene059294 | MS.gene85276 | -0.831452 | 1.66E-55 | -1.69E-46 |
| MS.gene059420 | MS.gene85276 | -0.926836 | 2.71E-91 | -1.69E-46 |
| MS.gene059462 | MS.gene85276 | -0.850026 | 2.22E-60 | -1.69E-46 |
| MS.gene059512 | MS.gene85276 | -0.815865 | 7.43E-52 | -1.69E-46 |
| MS.gene059609 | MS.gene85276 | -0.803697 | 3.08E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene85276 | -0.819423 | 1.17E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene85276 | -0.809979 | 1.45E-50 | -1.69E-46 |
| MS.gene059695 | MS.gene85276 | -0.811228 | 7.77E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene85276 | -0.862461 | 4.99E-64 | -1.69E-46 |
| MS.gene059876 | MS.gene85276 | -0.811586 | 6.50E-51 | -1.69E-46 |
| MS.gene060038 | MS.gene85276 | -0.846301 | 2.37E-59 | -1.69E-46 |
| MS.gene060247 | MS.gene85276 | -0.8326 | 8.62E-56 | -1.69E-46 |
| MS.gene060403 | MS.gene85276 | -0.827945 | 1.18E-54 | -1.69E-46 |
| MS.gene060986 | MS.gene85276 | -0.820658 | 6.11E-53 | -1.69E-46 |
| MS.gene061049 | MS.gene85276 | -0.852007 | 6.12E-61 | -1.69E-46 |
| MS.gene061114 | MS.gene85276 | 0.849096 | 4.03E-60 | -1.69E-46 |
| MS.gene061154 | MS.gene85276 | -0.883707 | 3.57E-71 | -1.69E-46 |
| MS.gene061159 | MS.gene85276 | -0.817153 | 3.82E-52 | -1.69E-46 |
| MS.gene061214 | MS.gene85276 | -0.826463 | 2.68E-54 | -1.69E-46 |
| MS.gene061215 | MS.gene85276 | -0.82644 | 2.71E-54 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85276.t1 | MTR_2g098950 | 98.480 | 329 | 5 | 0 | 1 | 329 | 1 | 329 | 0.0 | 659 |
| MS.gene85276.t1 | MTR_4g067310 | 89.752 | 322 | 33 | 0 | 7 | 328 | 8 | 329 | 0.0 | 594 |
| MS.gene85276.t1 | MTR_1g076850 | 67.089 | 316 | 104 | 0 | 14 | 329 | 8 | 323 | 1.05e-159 | 449 |
| MS.gene85276.t1 | MTR_5g079460 | 67.492 | 323 | 103 | 2 | 5 | 325 | 57 | 379 | 9.93e-153 | 434 |
| MS.gene85276.t1 | MTR_1g101950 | 63.385 | 325 | 113 | 2 | 8 | 326 | 13 | 337 | 1.44e-148 | 421 |
| MS.gene85276.t1 | MTR_6g089480 | 62.783 | 309 | 113 | 1 | 21 | 327 | 1 | 309 | 6.45e-145 | 411 |
| MS.gene85276.t1 | MTR_6g089480 | 63.004 | 273 | 99 | 1 | 21 | 291 | 1 | 273 | 5.90e-127 | 364 |
| MS.gene85276.t1 | MTR_6g089480 | 63.704 | 270 | 96 | 1 | 21 | 288 | 1 | 270 | 9.04e-127 | 363 |
| MS.gene85276.t1 | MTR_7g075860 | 56.918 | 318 | 133 | 3 | 14 | 327 | 41 | 358 | 3.33e-125 | 363 |
| MS.gene85276.t1 | MTR_1g069745 | 51.020 | 294 | 130 | 4 | 35 | 326 | 4 | 285 | 5.26e-100 | 296 |
| MS.gene85276.t1 | MTR_1g057810 | 48.923 | 325 | 155 | 5 | 4 | 325 | 244 | 560 | 2.65e-99 | 304 |
| MS.gene85276.t1 | MTR_1g069490 | 49.211 | 317 | 133 | 4 | 12 | 326 | 108 | 398 | 3.15e-97 | 293 |
| MS.gene85276.t1 | MTR_1g105150 | 45.846 | 325 | 151 | 6 | 4 | 325 | 244 | 546 | 4.35e-87 | 272 |
| MS.gene85276.t1 | MTR_1g054730 | 45.221 | 272 | 120 | 2 | 54 | 325 | 144 | 386 | 2.22e-70 | 224 |
| MS.gene85276.t1 | MTR_4g019165 | 32.698 | 367 | 200 | 4 | 7 | 326 | 86 | 452 | 2.26e-53 | 182 |
| MS.gene85276.t1 | MTR_5g044990 | 32.686 | 309 | 183 | 5 | 40 | 326 | 250 | 555 | 6.59e-50 | 175 |
| MS.gene85276.t1 | MTR_0046s0180 | 52.000 | 100 | 48 | 0 | 225 | 324 | 8 | 107 | 4.66e-31 | 113 |
| MS.gene85276.t1 | MTR_2g072830 | 27.055 | 292 | 181 | 9 | 45 | 327 | 89 | 357 | 4.21e-16 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85276.t1 | AT3G59480 | 82.927 | 328 | 52 | 1 | 1 | 328 | 1 | 324 | 0.0 | 559 |
| MS.gene85276.t1 | AT2G31390 | 83.228 | 316 | 53 | 0 | 13 | 328 | 8 | 323 | 0.0 | 545 |
| MS.gene85276.t1 | AT1G06030 | 79.878 | 328 | 63 | 1 | 1 | 328 | 1 | 325 | 0.0 | 544 |
| MS.gene85276.t1 | AT1G06020 | 79.573 | 328 | 63 | 1 | 1 | 328 | 1 | 324 | 0.0 | 541 |
| MS.gene85276.t1 | AT4G10260 | 68.868 | 318 | 99 | 0 | 12 | 329 | 4 | 321 | 1.54e-160 | 451 |
| MS.gene85276.t1 | AT1G66430 | 64.286 | 322 | 113 | 2 | 3 | 323 | 55 | 375 | 2.43e-152 | 433 |
| MS.gene85276.t1 | AT5G51830 | 65.094 | 318 | 109 | 1 | 14 | 329 | 23 | 340 | 1.14e-148 | 422 |
| MS.gene85276.t1 | AT5G51830 | 65.094 | 318 | 109 | 1 | 14 | 329 | 23 | 340 | 1.14e-148 | 422 |
| MS.gene85276.t1 | AT1G50390 | 61.176 | 170 | 37 | 1 | 159 | 328 | 1 | 141 | 2.98e-66 | 205 |
| MS.gene85276.t1 | AT3G54090 | 33.243 | 367 | 197 | 6 | 7 | 326 | 96 | 461 | 7.19e-54 | 183 |
| MS.gene85276.t1 | AT1G69200 | 31.250 | 288 | 176 | 3 | 40 | 306 | 246 | 532 | 1.94e-42 | 155 |
| MS.gene85276.t1 | AT1G17160 | 27.425 | 299 | 175 | 10 | 45 | 328 | 105 | 376 | 2.22e-15 | 76.6 |
| MS.gene85276.t1 | AT1G06730 | 25.839 | 298 | 198 | 8 | 46 | 329 | 132 | 420 | 8.89e-15 | 75.5 |
Find 96 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACTTTGTCCCAACTGTTTC+CGG | 0.182064 | 2.4:-5087867 | MS.gene85276:CDS |
| ACAAGGAGCAACTTCAAATT+TGG | 0.187281 | 2.4:+5085954 | None:intergenic |
| TTCCTTTGTTGGTGCTTTAT+TGG | 0.217574 | 2.4:-5085709 | MS.gene85276:CDS |
| GAGAAGGCAGCCAGCTTCTT+TGG | 0.228047 | 2.4:+5086148 | None:intergenic |
| AGCAATCACAACTACTAAAA+AGG | 0.271618 | 2.4:-5085435 | MS.gene85276:CDS |
| GCAAGCAAATACTGAGTATC+TGG | 0.286211 | 2.4:-5086073 | MS.gene85276:CDS |
| CTAAGCACTTACTTCTAATA+TGG | 0.330358 | 2.4:+5085665 | None:intergenic |
| AGTTCGAGGTTGAGTTCTTC+AGG | 0.330827 | 2.4:+5087555 | None:intergenic |
| CATGCTCGTCGGGATCTTAA+AGG | 0.337842 | 2.4:-5087712 | MS.gene85276:CDS |
| TGGCTCCACAATCAAGCTTA+TGG | 0.338825 | 2.4:+5086205 | None:intergenic |
| ACTTTGTCCCAACTGTTTCC+GGG | 0.348465 | 2.4:-5087866 | MS.gene85276:CDS |
| GCCATCGCTGTTTCCCGATT+AGG | 0.356581 | 2.4:-5087783 | MS.gene85276:CDS |
| AGGCAGCTTTGCCTCCTAAT+CGG | 0.387773 | 2.4:+5087769 | None:intergenic |
| GGTGCCGGTGATTCCTTTGT+TGG | 0.398386 | 2.4:-5085720 | MS.gene85276:CDS |
| GGCCAAGATTGTTGATGATC+AGG | 0.401747 | 2.4:-5085688 | MS.gene85276:CDS |
| GACGTTCGCTGGTGCACCGC+CGG | 0.406668 | 2.4:+5087806 | None:intergenic |
| CCAAGGTGCACGTACTGCTT+TGG | 0.410980 | 2.4:-5087655 | MS.gene85276:CDS |
| GCCGGGAGCTTTGAGAAAAC+CGG | 0.420639 | 2.4:+5087824 | None:intergenic |
| GTCAATACAGTTGATACAAC+TGG | 0.425906 | 2.4:-5085741 | MS.gene85276:CDS |
| TTGCGAGCTTCTTCCGCTGA+GGG | 0.429226 | 2.4:+5086092 | None:intergenic |
| CACAGTGGTAGGCGGAGGTT+AGG | 0.430184 | 2.4:+5086116 | None:intergenic |
| AAGTTGCTCCTTGTCACTCT+TGG | 0.431035 | 2.4:-5085945 | MS.gene85276:CDS |
| CTTGTCACTCTTGGTGAACA+TGG | 0.436126 | 2.4:-5085936 | MS.gene85276:CDS |
| CAAGGAGCAACTTCAAATTT+GGG | 0.437763 | 2.4:+5085955 | None:intergenic |
| GGCAGCTTTGCCTCCTAATC+GGG | 0.442724 | 2.4:+5087770 | None:intergenic |
| CAGGAATCTATGCTTTGATC+AGG | 0.443006 | 2.4:+5085372 | None:intergenic |
| ATGTAGATCAGCACACTTGA+AGG | 0.450810 | 2.4:-5086183 | MS.gene85276:CDS |
| ACAGCGATGGCGACGTTCGC+TGG | 0.452557 | 2.4:+5087795 | None:intergenic |
| ACGTTCGCTGGTGCACCGCC+GGG | 0.457893 | 2.4:+5087807 | None:intergenic |
| TTCAGTACATCCTCCTCCTT+GGG | 0.459048 | 2.4:+5085395 | None:intergenic |
| GTTCAGTACATCCTCCTCCT+TGG | 0.459298 | 2.4:+5085394 | None:intergenic |
| GCTGCCTTCGTCGGGAAACT+AGG | 0.459666 | 2.4:-5087753 | MS.gene85276:CDS |
| CCGCTGAGGGCCACAGTGGT+AGG | 0.460757 | 2.4:+5086105 | None:intergenic |
| GTCTCCCTTGCAGAAGCCCC+CGG | 0.460901 | 2.4:-5087843 | MS.gene85276:CDS |
| GGCCTGATCATCAACAATCT+TGG | 0.466456 | 2.4:+5085686 | None:intergenic |
| ACTGGTCTCATCGTCAGCTT+CGG | 0.467497 | 2.4:-5087903 | MS.gene85276:CDS |
| TCCTCCTCCTTGGGAAGAGC+AGG | 0.469695 | 2.4:+5085404 | None:intergenic |
| GAGGCAAAGCTGCCTTCGTC+GGG | 0.469972 | 2.4:-5087761 | MS.gene85276:CDS |
| TAGGCGGAGGTTAGGATCAT+AGG | 0.483812 | 2.4:+5086124 | None:intergenic |
| CCGGGAGCTTTGAGAAAACC+GGG | 0.487608 | 2.4:+5087825 | None:intergenic |
| AATGAGCTGGAGTTCCTGAC+TGG | 0.488918 | 2.4:-5086020 | MS.gene85276:CDS |
| TTAAGAAGCATGTCAGCACT+TGG | 0.493995 | 2.4:+5087579 | None:intergenic |
| AGTTCGGTCACATGCTCGTC+GGG | 0.494876 | 2.4:-5087722 | MS.gene85276:CDS |
| CTTGCGAGCTTCTTCCGCTG+AGG | 0.497527 | 2.4:+5086091 | None:intergenic |
| GGAAAAGGCTGATTTGATCA+AGG | 0.504055 | 2.4:-5086051 | MS.gene85276:CDS |
| GGCTTCTGCAAGGGAGACCC+CGG | 0.504829 | 2.4:+5087848 | None:intergenic |
| AATACTGAGTATCTGGGAAA+AGG | 0.509401 | 2.4:-5086066 | MS.gene85276:CDS |
| GGAGGCAAAGCTGCCTTCGT+CGG | 0.509809 | 2.4:-5087762 | MS.gene85276:CDS |
| ATGGAAGTTGCCAAAGAAGC+TGG | 0.510846 | 2.4:-5086158 | MS.gene85276:CDS |
| TGAGACCAGTGCCTGTGGTT+GGG | 0.512647 | 2.4:+5087916 | None:intergenic |
| AAACTAGGCGATGACGAGTT+CGG | 0.513562 | 2.4:-5087738 | MS.gene85276:CDS |
| CATAAACTCACGCTCTCCAT+CGG | 0.515761 | 2.4:+5087614 | None:intergenic |
| ATGCTACTGCTTTGACATTG+TGG | 0.517687 | 2.4:-5085980 | MS.gene85276:CDS |
| GGCATCCCAACCACAGGCAC+TGG | 0.519828 | 2.4:-5087921 | MS.gene85276:CDS |
| GGGAGACCCCGGAAACAGTT+GGG | 0.528224 | 2.4:+5087859 | None:intergenic |
| GTACAGATCTGATGAGTTCG+AGG | 0.528295 | 2.4:+5087541 | None:intergenic |
| GTCGGGATCTTAAAGGAAAA+CGG | 0.531500 | 2.4:-5087705 | MS.gene85276:CDS |
| ACTTCAATGGCTTCAAGCAA+TGG | 0.538580 | 2.4:-5087942 | None:intergenic |
| ATCGCTGTTTCCCGATTAGG+AGG | 0.542152 | 2.4:-5087780 | MS.gene85276:CDS |
| TCCTGCTCTTCCCAAGGAGG+AGG | 0.543892 | 2.4:-5085405 | MS.gene85276:CDS |
| AGGGCCACAGTGGTAGGCGG+AGG | 0.545092 | 2.4:+5086111 | None:intergenic |
| CAAGGTTAGTGATAATGAGC+TGG | 0.551346 | 2.4:-5086033 | MS.gene85276:CDS |
| CAAGCAAATACTGAGTATCT+GGG | 0.559518 | 2.4:-5086072 | MS.gene85276:CDS |
| TTCAAGTGTGCTGATCTACA+TGG | 0.561390 | 2.4:+5086185 | None:intergenic |
| TCAAGCTTATGGATCCATAG+TGG | 0.562307 | 2.4:+5086216 | None:intergenic |
| CTTTGTCCCAACTGTTTCCG+GGG | 0.562958 | 2.4:-5087865 | MS.gene85276:CDS |
| AGGGAGACCCCGGAAACAGT+TGG | 0.563390 | 2.4:+5087858 | None:intergenic |
| AGCACCAACAAAGGAATCAC+CGG | 0.564007 | 2.4:+5085716 | None:intergenic |
| ATCAGCACACTTGAAGGCAA+TGG | 0.564340 | 2.4:-5086177 | MS.gene85276:CDS |
| GGTTAGGATCATAGGAGAGA+AGG | 0.565489 | 2.4:+5086132 | None:intergenic |
| AGCAATTCCTGCTCTTCCCA+AGG | 0.570369 | 2.4:-5085411 | MS.gene85276:CDS |
| TGGATCCATAAGCTTGATTG+TGG | 0.577549 | 2.4:-5086210 | MS.gene85276:CDS |
| GAGTTCGGTCACATGCTCGT+CGG | 0.579094 | 2.4:-5087723 | MS.gene85276:CDS |
| ACAGTTGATACAACTGGTGC+CGG | 0.581263 | 2.4:-5085735 | MS.gene85276:CDS |
| GAAAACGGTGTGGTCGCAGA+AGG | 0.582324 | 2.4:-5087690 | MS.gene85276:CDS |
| TCCTAATCGGGAAACAGCGA+TGG | 0.585587 | 2.4:+5087782 | None:intergenic |
| AGTACGTGCACCTTGGTCAA+AGG | 0.592226 | 2.4:+5087662 | None:intergenic |
| CCAAAGCAGTACGTGCACCT+TGG | 0.592587 | 2.4:+5087655 | None:intergenic |
| ATGAGACCAGTGCCTGTGGT+TGG | 0.592790 | 2.4:+5087915 | None:intergenic |
| CTCAAGTTTGCAAATGCATG+TGG | 0.598828 | 2.4:-5085458 | MS.gene85276:CDS |
| ATCGCCTAGTTTCCCGACGA+AGG | 0.599330 | 2.4:+5087749 | None:intergenic |
| AGCAATGGCATCCCAACCAC+AGG | 0.606388 | 2.4:-5087927 | MS.gene85276:CDS |
| GGCCAATAAAGCACCAACAA+AGG | 0.608161 | 2.4:+5085707 | None:intergenic |
| TTTGTTACTCTACGCGCCGA+TGG | 0.610292 | 2.4:-5087630 | MS.gene85276:CDS |
| CTGAGGGCCACAGTGGTAGG+CGG | 0.610577 | 2.4:+5086108 | None:intergenic |
| CATGTTCACCAAGAGTGACA+AGG | 0.619134 | 2.4:+5085937 | None:intergenic |
| GAAGGTATAACCTTTGACCA+AGG | 0.632928 | 2.4:-5087672 | MS.gene85276:CDS |
| GGGAGCTTTGAGAAAACCGG+GGG | 0.651383 | 2.4:+5087827 | None:intergenic |
| GACGATGAGACCAGTGCCTG+TGG | 0.653048 | 2.4:+5087911 | None:intergenic |
| CCTACCACTGTGGCCCTCAG+CGG | 0.657292 | 2.4:-5086105 | MS.gene85276:CDS |
| AATTCCTGCTCTTCCCAAGG+AGG | 0.668223 | 2.4:-5085408 | MS.gene85276:CDS |
| CGGGAGCTTTGAGAAAACCG+GGG | 0.680003 | 2.4:+5087826 | None:intergenic |
| TCTTCCGCTGAGGGCCACAG+TGG | 0.686880 | 2.4:+5086101 | None:intergenic |
| GATCTTAAAGGAAAACGGTG+TGG | 0.740295 | 2.4:-5087700 | MS.gene85276:CDS |
| CTAACCTCCGCCTACCACTG+TGG | 0.743836 | 2.4:-5086115 | MS.gene85276:CDS |
| TGGCGCAAGATACTACACCA+AGG | 0.783785 | 2.4:-5085916 | MS.gene85276:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTAGAAAAATAAAAAGAAT+TGG | + | chr2.4:5086791-5086810 | None:intergenic | 15.0% |
| !! | TTACTATATGGTAAATAAAT+TGG | - | chr2.4:5086208-5086227 | MS.gene85276:CDS | 15.0% |
| !!! | AAACTTAATTTTAATTTGAC+AGG | - | chr2.4:5087066-5087085 | MS.gene85276:intron | 15.0% |
| !! | AAAACCATATCATATAGTAT+CGG | + | chr2.4:5086023-5086042 | None:intergenic | 20.0% |
| !! | AAAATTCGCATATATGTAAA+AGG | + | chr2.4:5086482-5086501 | None:intergenic | 20.0% |
| !! | AAACATTAAAGAAAATCAAC+TGG | + | chr2.4:5086666-5086685 | None:intergenic | 20.0% |
| !! | AAATTCGCATATATGTAAAA+GGG | + | chr2.4:5086481-5086500 | None:intergenic | 20.0% |
| !! | AATTCGTCCATAAAATTATA+CGG | + | chr2.4:5086517-5086536 | None:intergenic | 20.0% |
| !! | AATTTAAATAATGCAACTTG+TGG | - | chr2.4:5086810-5086829 | MS.gene85276:intron | 20.0% |
| !! | AGAATAAAGAAATTACTACA+TGG | + | chr2.4:5086555-5086574 | None:intergenic | 20.0% |
| !! | ATCAATTACAAAAACTCAAA+CGG | + | chr2.4:5087788-5087807 | None:intergenic | 20.0% |
| !! | CTCAAATTTATTAGTAAGAT+TGG | - | chr2.4:5086374-5086393 | MS.gene85276:intron | 20.0% |
| !! | TAGTAATATATAAATTCGCA+TGG | - | chr2.4:5086855-5086874 | MS.gene85276:intron | 20.0% |
| !! | TTATTTACCATATAGTAACA+TGG | + | chr2.4:5086206-5086225 | None:intergenic | 20.0% |
| !! | TTCTAAACAAAGATATTCTT+TGG | + | chr2.4:5087486-5087505 | None:intergenic | 20.0% |
| !! | TTGAATTTGATTATTACACA+TGG | + | chr2.4:5086937-5086956 | None:intergenic | 20.0% |
| !!! | ATATGGTTTTGATTTTGTTT+TGG | - | chr2.4:5086033-5086052 | MS.gene85276:CDS | 20.0% |
| !!! | TATTCATCCTCTAAATTTTT+AGG | - | chr2.4:5086096-5086115 | MS.gene85276:CDS | 20.0% |
| !!! | TGATTTATTTTCATAATTGC+AGG | - | chr2.4:5087811-5087830 | MS.gene85276:CDS | 20.0% |
| !!! | TTTTATCTTCATCAACTTTA+AGG | + | chr2.4:5086127-5086146 | None:intergenic | 20.0% |
| !!! | TTTTGTATGTTTAGTCTAAT+GGG | - | chr2.4:5086324-5086343 | MS.gene85276:intron | 20.0% |
| !!! | TTTTTGTATGTTTAGTCTAA+TGG | - | chr2.4:5086323-5086342 | MS.gene85276:intron | 20.0% |
| ! | AACCAATAGTACAAAAAGTA+GGG | + | chr2.4:5087437-5087456 | None:intergenic | 25.0% |
| ! | ATATTAGAAGTAAGTGCTTA+GGG | - | chr2.4:5087652-5087671 | MS.gene85276:CDS | 25.0% |
| ! | ATTAGTCCTAGATCTAATAA+TGG | + | chr2.4:5085978-5085997 | None:intergenic | 25.0% |
| ! | CGTAGGAAAAAAAAAGAATT+AGG | - | chr2.4:5086615-5086634 | MS.gene85276:intron | 25.0% |
| ! | CTTACTAATAAATTTGAGCA+CGG | + | chr2.4:5086372-5086391 | None:intergenic | 25.0% |
| ! | CTTTAAACCATGTTACTATA+TGG | - | chr2.4:5086196-5086215 | MS.gene85276:CDS | 25.0% |
| ! | TATATGTAAAAGGGTCAATT+CGG | + | chr2.4:5086472-5086491 | None:intergenic | 25.0% |
| ! | TCAATTACAAAAACTCAAAC+GGG | + | chr2.4:5087787-5087806 | None:intergenic | 25.0% |
| !! | CATTGACTAAGTACATTATT+TGG | - | chr2.4:5086898-5086917 | MS.gene85276:intron | 25.0% |
| !! | TGATTTACCATTTGAGTTAT+GGG | - | chr2.4:5087028-5087047 | MS.gene85276:intron | 25.0% |
| !! | TTTTGATCCAATTGTAAGAT+CGG | - | chr2.4:5086403-5086422 | MS.gene85276:intron | 25.0% |
| !!! | AAGTTGATGAAGATAAAAAG+AGG | - | chr2.4:5086129-5086148 | MS.gene85276:CDS | 25.0% |
| !!! | TCTTTTTTTTTCCTACGTAA+TGG | + | chr2.4:5086612-5086631 | None:intergenic | 25.0% |
| ACCTCAAGTTTGAATAATGT+TGG | + | chr2.4:5086302-5086321 | None:intergenic | 30.0% | |
| ACGTAATGGTAACTATCAAA+TGG | + | chr2.4:5086598-5086617 | None:intergenic | 30.0% | |
| ACTTAGTCAATGATGTAACA+CGG | + | chr2.4:5086890-5086909 | None:intergenic | 30.0% | |
| AGCAATCACAACTACTAAAA+AGG | - | chr2.4:5087880-5087899 | MS.gene85276:CDS | 30.0% | |
| AGTAGCTAATGTGTATTAAG+GGG | + | chr2.4:5087682-5087701 | None:intergenic | 30.0% | |
| ATACACATTAGCTACTCAAA+TGG | - | chr2.4:5087686-5087705 | MS.gene85276:CDS | 30.0% | |
| ATTTAGCATGACGACAAAAT+TGG | + | chr2.4:5086172-5086191 | None:intergenic | 30.0% | |
| CAACCAATAGTACAAAAAGT+AGG | + | chr2.4:5087438-5087457 | None:intergenic | 30.0% | |
| CAATTACAAAAACTCAAACG+GGG | + | chr2.4:5087786-5087805 | None:intergenic | 30.0% | |
| CATATTAGAAGTAAGTGCTT+AGG | - | chr2.4:5087651-5087670 | MS.gene85276:CDS | 30.0% | |
| CATTGATAAAATTACTGCCT+TGG | - | chr2.4:5086995-5087014 | MS.gene85276:intron | 30.0% | |
| CTAAGCACTTACTTCTAATA+TGG | + | chr2.4:5087653-5087672 | None:intergenic | 30.0% | |
| CTAATAAGCTGCATAATTTG+AGG | + | chr2.4:5086235-5086254 | None:intergenic | 30.0% | |
| GAGTAGCTAATGTGTATTAA+GGG | + | chr2.4:5087683-5087702 | None:intergenic | 30.0% | |
| GCAATCACAACTACTAAAAA+GGG | - | chr2.4:5087881-5087900 | MS.gene85276:CDS | 30.0% | |
| TAAATCACACAATTCAACCA+AGG | + | chr2.4:5087015-5087034 | None:intergenic | 30.0% | |
| TCCAACATTATTCAAACTTG+AGG | - | chr2.4:5086298-5086317 | MS.gene85276:intron | 30.0% | |
| TGAGTAGCTAATGTGTATTA+AGG | + | chr2.4:5087684-5087703 | None:intergenic | 30.0% | |
| ! | GATTTACCATTTGAGTTATG+GGG | - | chr2.4:5087029-5087048 | MS.gene85276:intron | 30.0% |
| ! | GTGATTTACCATTTGAGTTA+TGG | - | chr2.4:5087027-5087046 | MS.gene85276:intron | 30.0% |
| ! | TAAAAAGAGGCTTTTGAATG+AGG | - | chr2.4:5086142-5086161 | MS.gene85276:CDS | 30.0% |
| ! | TGTTGGTCCGTATAATTTTA+TGG | - | chr2.4:5086507-5086526 | MS.gene85276:intron | 30.0% |
| ! | TTTGATAGTTACCATTACGT+AGG | - | chr2.4:5086598-5086617 | MS.gene85276:intron | 30.0% |
| !! | CACAAATCTGTTTCTATCAT+TGG | + | chr2.4:5086434-5086453 | None:intergenic | 30.0% |
| !! | TATGCGAATTTTAGAGATGT+TGG | - | chr2.4:5086490-5086509 | MS.gene85276:intron | 30.0% |
| !!! | GGTTTTGATTTTGTTTTGGT+GGG | - | chr2.4:5086037-5086056 | MS.gene85276:CDS | 30.0% |
| !!! | TGGTTTTGATTTTGTTTTGG+TGG | - | chr2.4:5086036-5086055 | MS.gene85276:CDS | 30.0% |
| AATACTGAGTATCTGGGAAA+AGG | - | chr2.4:5087249-5087268 | MS.gene85276:intron | 35.0% | |
| ACAAGGAGCAACTTCAAATT+TGG | + | chr2.4:5087364-5087383 | None:intergenic | 35.0% | |
| AGAAACAGATTTGTGCATGT+TGG | - | chr2.4:5086439-5086458 | MS.gene85276:intron | 35.0% | |
| AGCAATTATATTTCATGGCG+TGG | - | chr2.4:5086762-5086781 | MS.gene85276:intron | 35.0% | |
| CAAGCAAATACTGAGTATCT+GGG | - | chr2.4:5087243-5087262 | MS.gene85276:intron | 35.0% | |
| CAAGGAGCAACTTCAAATTT+GGG | + | chr2.4:5087363-5087382 | None:intergenic | 35.0% | |
| CATGAAAATTCTGGCAAAAG+GGG | + | chr2.4:5087534-5087553 | None:intergenic | 35.0% | |
| CCATGAAAATTCTGGCAAAA+GGG | + | chr2.4:5087535-5087554 | None:intergenic | 35.0% | |
| CTACTTGTCCATGAAAATTC+TGG | + | chr2.4:5087543-5087562 | None:intergenic | 35.0% | |
| GACTTCAAATTTGTGTGTTG+AGG | - | chr2.4:5085903-5085922 | MS.gene85276:intron | 35.0% | |
| GCAAATTAGTCCATATCACT+TGG | - | chr2.4:5086254-5086273 | MS.gene85276:intron | 35.0% | |
| GCTACCGATACTATATGATA+TGG | - | chr2.4:5086016-5086035 | MS.gene85276:CDS | 35.0% | |
| GCTATTATTGTTGGATTCTG+AGG | + | chr2.4:5086689-5086708 | None:intergenic | 35.0% | |
| GCTGGAGCAATTATATTTCA+TGG | - | chr2.4:5086757-5086776 | MS.gene85276:intron | 35.0% | |
| GGTGACTCCTAAAAATTTAG+AGG | + | chr2.4:5086106-5086125 | None:intergenic | 35.0% | |
| TCCATGAAAATTCTGGCAAA+AGG | + | chr2.4:5087536-5087555 | None:intergenic | 35.0% | |
| TCGTCGTATGCTATTATTGT+TGG | + | chr2.4:5086698-5086717 | None:intergenic | 35.0% | |
| ! | GTCAATACAGTTGATACAAC+TGG | - | chr2.4:5087574-5087593 | MS.gene85276:CDS | 35.0% |
| ! | TAGGGACATAGATTTTACCT+TGG | + | chr2.4:5087419-5087438 | None:intergenic | 35.0% |
| ! | TTCCTTTGTTGGTGCTTTAT+TGG | - | chr2.4:5087606-5087625 | MS.gene85276:CDS | 35.0% |
| !!! | GGATAATCTTTTGACTTGCA+AGG | + | chr2.4:5086281-5086300 | None:intergenic | 35.0% |
| !!! | GTCCCTACTTTTTGTACTAT+TGG | - | chr2.4:5087432-5087451 | MS.gene85276:intron | 35.0% |
| !!! | TTGATTTTGTTTTGGTGGGT+GGG | - | chr2.4:5086041-5086060 | MS.gene85276:CDS | 35.0% |
| !!! | TTTGATTTTGTTTTGGTGGG+TGG | - | chr2.4:5086040-5086059 | MS.gene85276:CDS | 35.0% |
| ATGCTACTGCTTTGACATTG+TGG | - | chr2.4:5087335-5087354 | MS.gene85276:intron | 40.0% | |
| ATGTAAAAGGGTCAATTCGG+TGG | + | chr2.4:5086469-5086488 | None:intergenic | 40.0% | |
| ATGTAGATCAGCACACTTGA+AGG | - | chr2.4:5087132-5087151 | MS.gene85276:intron | 40.0% | |
| CTCAAGTTTGCAAATGCATG+TGG | - | chr2.4:5087857-5087876 | MS.gene85276:CDS | 40.0% | |
| GATCCAATTGTAAGATCGGT+TGG | - | chr2.4:5086407-5086426 | MS.gene85276:intron | 40.0% | |
| GATCTTAAAGGAAAACGGTG+TGG | - | chr2.4:5085615-5085634 | MS.gene85276:intron | 40.0% | |
| GCAAGCAAATACTGAGTATC+TGG | - | chr2.4:5087242-5087261 | MS.gene85276:intron | 40.0% | |
| GTCGGGATCTTAAAGGAAAA+CGG | - | chr2.4:5085610-5085629 | MS.gene85276:intron | 40.0% | |
| TCAAGCTTATGGATCCATAG+TGG | + | chr2.4:5087102-5087121 | None:intergenic | 40.0% | |
| TGGATCCATAAGCTTGATTG+TGG | - | chr2.4:5087105-5087124 | MS.gene85276:intron | 40.0% | |
| TGGGGTCCATTATTAGATCT+AGG | - | chr2.4:5085969-5085988 | MS.gene85276:CDS | 40.0% | |
| ! | CAAGGTTAGTGATAATGAGC+TGG | - | chr2.4:5087282-5087301 | MS.gene85276:intron | 40.0% |
| ! | CAGGCAAAAGTTTTCCACTA+TGG | - | chr2.4:5087085-5087104 | MS.gene85276:intron | 40.0% |
| ! | CCCTTTTGCCAGAATTTTCA+TGG | - | chr2.4:5087532-5087551 | MS.gene85276:intron | 40.0% |
| ! | GAAGGTATAACCTTTGACCA+AGG | - | chr2.4:5085643-5085662 | MS.gene85276:intron | 40.0% |
| ! | TACCATTTGAGTTATGGGGT+AGG | - | chr2.4:5087033-5087052 | MS.gene85276:intron | 40.0% |
| ! | TTAAGAAGCATGTCAGCACT+TGG | + | chr2.4:5085739-5085758 | None:intergenic | 40.0% |
| ! | TTCAAGTGTGCTGATCTACA+TGG | + | chr2.4:5087133-5087152 | None:intergenic | 40.0% |
| !! | CAATTTTGTCACTTCCAGTC+AGG | + | chr2.4:5087312-5087331 | None:intergenic | 40.0% |
| !! | CGTTGGTAGGTTTTATCAGT+GGG | - | chr2.4:5086721-5086740 | MS.gene85276:intron | 40.0% |
| !! | GGAAAAGGCTGATTTGATCA+AGG | - | chr2.4:5087264-5087283 | MS.gene85276:intron | 40.0% |
| !! | GTTGGTAGGTTTTATCAGTG+GGG | - | chr2.4:5086722-5086741 | MS.gene85276:intron | 40.0% |
| !! | TCATATAGTATCGGTAGCTC+TGG | + | chr2.4:5086014-5086033 | None:intergenic | 40.0% |
| !! | TTGGTAGGTTTTATCAGTGG+GGG | - | chr2.4:5086723-5086742 | MS.gene85276:intron | 40.0% |
| !!! | TGATTTTGTTTTGGTGGGTG+GGG | - | chr2.4:5086042-5086061 | MS.gene85276:CDS | 40.0% |
| AAAATTCTGGCAAAAGGGGC+AGG | + | chr2.4:5087530-5087549 | None:intergenic | 45.0% | |
| AAACTAGGCGATGACGAGTT+CGG | - | chr2.4:5085577-5085596 | MS.gene85276:intron | 45.0% | |
| AAGTTGCTCCTTGTCACTCT+TGG | - | chr2.4:5087370-5087389 | MS.gene85276:intron | 45.0% | |
| ACTTTGTCCCAACTGTTTCC+GGG | - | chr2.4:5085449-5085468 | MS.gene85276:CDS | 45.0% | |
| AGCACCAACAAAGGAATCAC+CGG | + | chr2.4:5087602-5087621 | None:intergenic | 45.0% | |
| AGTTCGAGGTTGAGTTCTTC+AGG | + | chr2.4:5085763-5085782 | None:intergenic | 45.0% | |
| ATCAGCACACTTGAAGGCAA+TGG | - | chr2.4:5087138-5087157 | MS.gene85276:intron | 45.0% | |
| ATGGAAGTTGCCAAAGAAGC+TGG | - | chr2.4:5087157-5087176 | MS.gene85276:intron | 45.0% | |
| CACCTACCCCATAACTCAAA+TGG | + | chr2.4:5087038-5087057 | None:intergenic | 45.0% | |
| CATAAACTCACGCTCTCCAT+CGG | + | chr2.4:5085704-5085723 | None:intergenic | 45.0% | |
| CATGTTCACCAAGAGTGACA+AGG | + | chr2.4:5087381-5087400 | None:intergenic | 45.0% | |
| CTTGCAAGGACCAAGTGATA+TGG | + | chr2.4:5086267-5086286 | None:intergenic | 45.0% | |
| CTTGTCACTCTTGGTGAACA+TGG | - | chr2.4:5087379-5087398 | MS.gene85276:intron | 45.0% | |
| GACTTTGTCCCAACTGTTTC+CGG | - | chr2.4:5085448-5085467 | MS.gene85276:CDS | 45.0% | |
| GGACCAACCGATCTTACAAT+TGG | + | chr2.4:5086413-5086432 | None:intergenic | 45.0% | |
| GGCCTGATCATCAACAATCT+TGG | + | chr2.4:5087632-5087651 | None:intergenic | 45.0% | |
| GGTTAGGATCATAGGAGAGA+AGG | + | chr2.4:5087186-5087205 | None:intergenic | 45.0% | |
| GTACAGATCTGATGAGTTCG+AGG | + | chr2.4:5085777-5085796 | None:intergenic | 45.0% | |
| TGGCTCCACAATCAAGCTTA+TGG | + | chr2.4:5087113-5087132 | None:intergenic | 45.0% | |
| TTCAGTACATCCTCCTCCTT+GGG | + | chr2.4:5087923-5087942 | None:intergenic | 45.0% | |
| ! | ACAGTTGATACAACTGGTGC+CGG | - | chr2.4:5087580-5087599 | MS.gene85276:CDS | 45.0% |
| ! | ATAGCATACGACGAAAGCGT+TGG | - | chr2.4:5086704-5086723 | MS.gene85276:intron | 45.0% |
| ! | GGCCAATAAAGCACCAACAA+AGG | + | chr2.4:5087611-5087630 | None:intergenic | 45.0% |
| !! | GCGTTGGTAGGTTTTATCAG+TGG | - | chr2.4:5086720-5086739 | MS.gene85276:intron | 45.0% |
| !! | GGCCAAGATTGTTGATGATC+AGG | - | chr2.4:5087627-5087646 | MS.gene85276:CDS | 45.0% |
| !! | TGGTAGGTTTTATCAGTGGG+GGG | - | chr2.4:5086724-5086743 | MS.gene85276:intron | 45.0% |
| !!! | GATTTTGTTTTGGTGGGTGG+GGG | - | chr2.4:5086043-5086062 | MS.gene85276:CDS | 45.0% |
| AATGAGCTGGAGTTCCTGAC+TGG | - | chr2.4:5087295-5087314 | MS.gene85276:intron | 50.0% | |
| AATTCCTGCTCTTCCCAAGG+AGG | - | chr2.4:5087907-5087926 | MS.gene85276:CDS | 50.0% | |
| AGCAATTCCTGCTCTTCCCA+AGG | - | chr2.4:5087904-5087923 | MS.gene85276:CDS | 50.0% | |
| AGGCAGCTTTGCCTCCTAAT+CGG | + | chr2.4:5085549-5085568 | None:intergenic | 50.0% | |
| AGTACGTGCACCTTGGTCAA+AGG | + | chr2.4:5085656-5085675 | None:intergenic | 50.0% | |
| CATGCTCGTCGGGATCTTAA+AGG | - | chr2.4:5085603-5085622 | MS.gene85276:intron | 50.0% | |
| CGACATTGACATGTCAGCGT+TGG | - | chr2.4:5085930-5085949 | MS.gene85276:CDS | 50.0% | |
| CTTTGTCCCAACTGTTTCCG+GGG | - | chr2.4:5085450-5085469 | MS.gene85276:CDS | 50.0% | |
| GTTCAGTACATCCTCCTCCT+TGG | + | chr2.4:5087924-5087943 | None:intergenic | 50.0% | |
| TAGGCGGAGGTTAGGATCAT+AGG | + | chr2.4:5087194-5087213 | None:intergenic | 50.0% | |
| TCCTAATCGGGAAACAGCGA+TGG | + | chr2.4:5085536-5085555 | None:intergenic | 50.0% | |
| TGGCGCAAGATACTACACCA+AGG | - | chr2.4:5087399-5087418 | MS.gene85276:intron | 50.0% | |
| TGGTGTGTTCATGTGGTGGT+GGG | - | chr2.4:5085950-5085969 | MS.gene85276:CDS | 50.0% | |
| TTGGTGTGTTCATGTGGTGG+TGG | - | chr2.4:5085949-5085968 | MS.gene85276:CDS | 50.0% | |
| TTTGTTACTCTACGCGCCGA+TGG | - | chr2.4:5085685-5085704 | MS.gene85276:CDS | 50.0% | |
| ! | ACTGGTCTCATCGTCAGCTT+CGG | - | chr2.4:5085412-5085431 | MS.gene85276:CDS | 50.0% |
| ! | ATCGCTGTTTCCCGATTAGG+AGG | - | chr2.4:5085535-5085554 | MS.gene85276:intron | 50.0% |
| !! | AGGTTTTATCAGTGGGGGGT+TGG | - | chr2.4:5086728-5086747 | MS.gene85276:intron | 50.0% |
| !! | CATACGACGAAAGCGTTGGT+AGG | - | chr2.4:5086708-5086727 | MS.gene85276:intron | 50.0% |
| !! | GGTTTTATCAGTGGGGGGTT+GGG | - | chr2.4:5086729-5086748 | MS.gene85276:intron | 50.0% |
| !! | TCAGCGTTGGTGTGTTCATG+TGG | - | chr2.4:5085943-5085962 | MS.gene85276:CDS | 50.0% |
| AAAACCGGGGGCTTCTGCAA+GGG | + | chr2.4:5085479-5085498 | None:intergenic | 55.0% | |
| AGCAATGGCATCCCAACCAC+AGG | - | chr2.4:5085388-5085407 | MS.gene85276:CDS | 55.0% | |
| AGTTCGGTCACATGCTCGTC+GGG | - | chr2.4:5085593-5085612 | MS.gene85276:intron | 55.0% | |
| ATCGCCTAGTTTCCCGACGA+AGG | + | chr2.4:5085569-5085588 | None:intergenic | 55.0% | |
| ATGAGACCAGTGCCTGTGGT+TGG | + | chr2.4:5085403-5085422 | None:intergenic | 55.0% | |
| CCAAAGCAGTACGTGCACCT+TGG | + | chr2.4:5085663-5085682 | None:intergenic | 55.0% | |
| CCAAGGTGCACGTACTGCTT+TGG | - | chr2.4:5085660-5085679 | MS.gene85276:intron | 55.0% | |
| GAAAACGGTGTGGTCGCAGA+AGG | - | chr2.4:5085625-5085644 | MS.gene85276:intron | 55.0% | |
| GAGAAGGCAGCCAGCTTCTT+TGG | + | chr2.4:5087170-5087189 | None:intergenic | 55.0% | |
| GAGTTCGGTCACATGCTCGT+CGG | - | chr2.4:5085592-5085611 | MS.gene85276:intron | 55.0% | |
| GGCAGCTTTGCCTCCTAATC+GGG | + | chr2.4:5085548-5085567 | None:intergenic | 55.0% | |
| TGAGACCAGTGCCTGTGGTT+GGG | + | chr2.4:5085402-5085421 | None:intergenic | 55.0% | |
| TTGCGAGCTTCTTCCGCTGA+GGG | + | chr2.4:5087226-5087245 | None:intergenic | 55.0% | |
| ! | CCCGGTTTTCTCAAAGCTCC+CGG | - | chr2.4:5085490-5085509 | MS.gene85276:intron | 55.0% |
| ! | GCCATCGCTGTTTCCCGATT+AGG | - | chr2.4:5085532-5085551 | MS.gene85276:intron | 55.0% |
| ! | GCGTTGGTGTGTTCATGTGG+TGG | - | chr2.4:5085946-5085965 | MS.gene85276:CDS | 55.0% |
| ! | GGTGTGTTCATGTGGTGGTG+GGG | - | chr2.4:5085951-5085970 | MS.gene85276:CDS | 55.0% |
| ! | GGTTTTCTCAAAGCTCCCGG+CGG | - | chr2.4:5085493-5085512 | MS.gene85276:intron | 55.0% |
| !! | CCGGGAGCTTTGAGAAAACC+GGG | + | chr2.4:5085493-5085512 | None:intergenic | 55.0% |
| !! | CGGGAGCTTTGAGAAAACCG+GGG | + | chr2.4:5085492-5085511 | None:intergenic | 55.0% |
| !! | GCCGGGAGCTTTGAGAAAAC+CGG | + | chr2.4:5085494-5085513 | None:intergenic | 55.0% |
| !! | GGGAGCTTTGAGAAAACCGG+GGG | + | chr2.4:5085491-5085510 | None:intergenic | 55.0% |
| !! | GGTGCCGGTGATTCCTTTGT+TGG | - | chr2.4:5087595-5087614 | MS.gene85276:CDS | 55.0% |
| !! | TTTTGGTGGGTGGGGGTTGT+TGG | - | chr2.4:5086050-5086069 | MS.gene85276:CDS | 55.0% |
| AGGGAGACCCCGGAAACAGT+TGG | + | chr2.4:5085460-5085479 | None:intergenic | 60.0% | |
| CACAGTGGTAGGCGGAGGTT+AGG | + | chr2.4:5087202-5087221 | None:intergenic | 60.0% | |
| CTAACCTCCGCCTACCACTG+TGG | - | chr2.4:5087200-5087219 | MS.gene85276:intron | 60.0% | |
| CTTGCGAGCTTCTTCCGCTG+AGG | + | chr2.4:5087227-5087246 | None:intergenic | 60.0% | |
| GAAAACCGGGGGCTTCTGCA+AGG | + | chr2.4:5085480-5085499 | None:intergenic | 60.0% | |
| GACGATGAGACCAGTGCCTG+TGG | + | chr2.4:5085407-5085426 | None:intergenic | 60.0% | |
| GAGGCAAAGCTGCCTTCGTC+GGG | - | chr2.4:5085554-5085573 | MS.gene85276:intron | 60.0% | |
| GCTGCCTTCGTCGGGAAACT+AGG | - | chr2.4:5085562-5085581 | MS.gene85276:intron | 60.0% | |
| GGAGGCAAAGCTGCCTTCGT+CGG | - | chr2.4:5085553-5085572 | MS.gene85276:intron | 60.0% | |
| GGGAGACCCCGGAAACAGTT+GGG | + | chr2.4:5085459-5085478 | None:intergenic | 60.0% | |
| TCCTCCTCCTTGGGAAGAGC+AGG | + | chr2.4:5087914-5087933 | None:intergenic | 60.0% | |
| TCCTGCTCTTCCCAAGGAGG+AGG | - | chr2.4:5087910-5087929 | MS.gene85276:CDS | 60.0% | |
| ACAGCGATGGCGACGTTCGC+TGG | + | chr2.4:5085523-5085542 | None:intergenic | 65.0% | |
| CCTACCACTGTGGCCCTCAG+CGG | - | chr2.4:5087210-5087229 | MS.gene85276:intron | 65.0% | |
| CTGAGGGCCACAGTGGTAGG+CGG | + | chr2.4:5087210-5087229 | None:intergenic | 65.0% | |
| GGCATCCCAACCACAGGCAC+TGG | - | chr2.4:5085394-5085413 | MS.gene85276:CDS | 65.0% | |
| GGCTTCTGCAAGGGAGACCC+CGG | + | chr2.4:5085470-5085489 | None:intergenic | 65.0% | |
| GGTGGGTGGGGGTTGTTGGT+TGG | - | chr2.4:5086054-5086073 | MS.gene85276:CDS | 65.0% | |
| GTCTCCCTTGCAGAAGCCCC+CGG | - | chr2.4:5085472-5085491 | MS.gene85276:CDS | 65.0% | |
| GTGGGGGGTTGGGATTTCGC+TGG | - | chr2.4:5086739-5086758 | MS.gene85276:intron | 65.0% | |
| TCTTCCGCTGAGGGCCACAG+TGG | + | chr2.4:5087217-5087236 | None:intergenic | 65.0% | |
| ACGTTCGCTGGTGCACCGCC+GGG | + | chr2.4:5085511-5085530 | None:intergenic | 70.0% | |
| AGGGCCACAGTGGTAGGCGG+AGG | + | chr2.4:5087207-5087226 | None:intergenic | 70.0% | |
| CCGCTGAGGGCCACAGTGGT+AGG | + | chr2.4:5087213-5087232 | None:intergenic | 70.0% | |
| GACGTTCGCTGGTGCACCGC+CGG | + | chr2.4:5085512-5085531 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 5085379 | 5087958 | 5085379 | ID=MS.gene85276 |
| chr2.4 | mRNA | 5085379 | 5087958 | 5085379 | ID=MS.gene85276.t1;Parent=MS.gene85276 |
| chr2.4 | exon | 5087545 | 5087958 | 5087545 | ID=MS.gene85276.t1.exon1;Parent=MS.gene85276.t1 |
| chr2.4 | CDS | 5087545 | 5087958 | 5087545 | ID=cds.MS.gene85276.t1;Parent=MS.gene85276.t1 |
| chr2.4 | exon | 5085917 | 5086249 | 5085917 | ID=MS.gene85276.t1.exon2;Parent=MS.gene85276.t1 |
| chr2.4 | CDS | 5085917 | 5086249 | 5085917 | ID=cds.MS.gene85276.t1;Parent=MS.gene85276.t1 |
| chr2.4 | exon | 5085677 | 5085793 | 5085677 | ID=MS.gene85276.t1.exon3;Parent=MS.gene85276.t1 |
| chr2.4 | CDS | 5085677 | 5085793 | 5085677 | ID=cds.MS.gene85276.t1;Parent=MS.gene85276.t1 |
| chr2.4 | exon | 5085379 | 5085504 | 5085379 | ID=MS.gene85276.t1.exon4;Parent=MS.gene85276.t1 |
| chr2.4 | CDS | 5085379 | 5085504 | 5085379 | ID=cds.MS.gene85276.t1;Parent=MS.gene85276.t1 |
| Gene Sequence |
| Protein sequence |
