Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46881.t1 | XP_013456308.1 | 99.1 | 331 | 3 | 0 | 1 | 331 | 1 | 331 | 1.70E-181 | 645.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46881.t1 | Q42896 | 86.2 | 320 | 44 | 0 | 10 | 329 | 6 | 325 | 7.8e-156 | 551.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46881.t1 | A0A072UKS2 | 99.1 | 331 | 3 | 0 | 1 | 331 | 1 | 331 | 1.2e-181 | 645.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049378 | MS.gene46881 | -0.807397 | 5.16E-50 | -1.69E-46 |
| MS.gene049599 | MS.gene46881 | 0.800209 | 1.60E-48 | -1.69E-46 |
| MS.gene049758 | MS.gene46881 | -0.830854 | 2.32E-55 | -1.69E-46 |
| MS.gene050623 | MS.gene46881 | 0.85858 | 7.47E-63 | -1.69E-46 |
| MS.gene050642 | MS.gene46881 | -0.805908 | 1.06E-49 | -1.69E-46 |
| MS.gene050762 | MS.gene46881 | -0.848686 | 5.23E-60 | -1.69E-46 |
| MS.gene050763 | MS.gene46881 | -0.851047 | 1.14E-60 | -1.69E-46 |
| MS.gene051245 | MS.gene46881 | -0.802349 | 5.85E-49 | -1.69E-46 |
| MS.gene051535 | MS.gene46881 | -0.800681 | 1.29E-48 | -1.69E-46 |
| MS.gene051983 | MS.gene46881 | -0.81092 | 9.07E-51 | -1.69E-46 |
| MS.gene052077 | MS.gene46881 | -0.820795 | 5.68E-53 | -1.69E-46 |
| MS.gene054379 | MS.gene46881 | -0.837201 | 5.98E-57 | -1.69E-46 |
| MS.gene054930 | MS.gene46881 | -0.820623 | 6.22E-53 | -1.69E-46 |
| MS.gene056400 | MS.gene46881 | -0.808069 | 3.71E-50 | -1.69E-46 |
| MS.gene056979 | MS.gene46881 | -0.80865 | 2.79E-50 | -1.69E-46 |
| MS.gene057199 | MS.gene46881 | -0.808403 | 3.15E-50 | -1.69E-46 |
| MS.gene058182 | MS.gene46881 | -0.829637 | 4.60E-55 | -1.69E-46 |
| MS.gene058399 | MS.gene46881 | -0.814298 | 1.65E-51 | -1.69E-46 |
| MS.gene058661 | MS.gene46881 | 0.805186 | 1.51E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene46881 | -0.812677 | 3.76E-51 | -1.69E-46 |
| MS.gene059899 | MS.gene46881 | -0.816637 | 4.99E-52 | -1.69E-46 |
| MS.gene060084 | MS.gene46881 | -0.882126 | 1.35E-70 | -1.69E-46 |
| MS.gene060297 | MS.gene46881 | -0.818741 | 1.67E-52 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46881.t1 | MTR_4g067310 | 99.094 | 331 | 3 | 0 | 1 | 331 | 1 | 331 | 0.0 | 663 |
| MS.gene46881.t1 | MTR_2g098950 | 90.062 | 322 | 32 | 0 | 8 | 329 | 7 | 328 | 0.0 | 595 |
| MS.gene46881.t1 | MTR_1g076850 | 67.516 | 314 | 102 | 0 | 15 | 328 | 8 | 321 | 1.71e-157 | 444 |
| MS.gene46881.t1 | MTR_1g101950 | 65.312 | 320 | 109 | 1 | 13 | 330 | 21 | 340 | 1.82e-149 | 424 |
| MS.gene46881.t1 | MTR_5g079460 | 67.085 | 319 | 104 | 1 | 13 | 330 | 65 | 383 | 1.46e-148 | 423 |
| MS.gene46881.t1 | MTR_6g089480 | 62.821 | 312 | 114 | 1 | 22 | 331 | 1 | 312 | 9.30e-144 | 408 |
| MS.gene46881.t1 | MTR_6g089480 | 64.074 | 270 | 95 | 1 | 22 | 289 | 1 | 270 | 1.43e-125 | 361 |
| MS.gene46881.t1 | MTR_6g089480 | 63.603 | 272 | 97 | 1 | 22 | 291 | 1 | 272 | 1.72e-125 | 361 |
| MS.gene46881.t1 | MTR_7g075860 | 57.233 | 318 | 132 | 3 | 15 | 328 | 41 | 358 | 3.75e-124 | 360 |
| MS.gene46881.t1 | MTR_1g069745 | 52.381 | 294 | 126 | 4 | 36 | 327 | 4 | 285 | 5.12e-100 | 296 |
| MS.gene46881.t1 | MTR_1g057810 | 50.633 | 316 | 146 | 4 | 14 | 326 | 252 | 560 | 4.48e-99 | 303 |
| MS.gene46881.t1 | MTR_1g069490 | 50.000 | 320 | 132 | 4 | 13 | 330 | 108 | 401 | 4.53e-97 | 293 |
| MS.gene46881.t1 | MTR_1g105150 | 47.468 | 316 | 142 | 5 | 14 | 326 | 252 | 546 | 7.23e-87 | 271 |
| MS.gene46881.t1 | MTR_1g054730 | 45.956 | 272 | 118 | 2 | 55 | 326 | 144 | 386 | 1.50e-69 | 222 |
| MS.gene46881.t1 | MTR_4g019165 | 31.608 | 367 | 204 | 4 | 8 | 327 | 86 | 452 | 7.94e-51 | 175 |
| MS.gene46881.t1 | MTR_5g044990 | 33.007 | 306 | 180 | 5 | 41 | 324 | 250 | 552 | 3.73e-50 | 176 |
| MS.gene46881.t1 | MTR_0046s0180 | 55.446 | 101 | 45 | 0 | 226 | 326 | 8 | 108 | 7.42e-33 | 118 |
| MS.gene46881.t1 | MTR_2g072830 | 28.231 | 294 | 175 | 10 | 46 | 328 | 89 | 357 | 2.21e-17 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46881.t1 | AT1G06030 | 84.494 | 316 | 49 | 0 | 14 | 329 | 10 | 325 | 0.0 | 561 |
| MS.gene46881.t1 | AT2G31390 | 83.333 | 330 | 49 | 1 | 1 | 330 | 1 | 324 | 0.0 | 561 |
| MS.gene46881.t1 | AT3G59480 | 85.397 | 315 | 46 | 0 | 15 | 329 | 10 | 324 | 0.0 | 558 |
| MS.gene46881.t1 | AT1G06020 | 83.228 | 316 | 53 | 0 | 14 | 329 | 9 | 324 | 0.0 | 550 |
| MS.gene46881.t1 | AT4G10260 | 69.524 | 315 | 96 | 0 | 15 | 329 | 6 | 320 | 1.94e-158 | 446 |
| MS.gene46881.t1 | AT1G66430 | 65.312 | 320 | 110 | 1 | 13 | 331 | 63 | 382 | 1.99e-153 | 436 |
| MS.gene46881.t1 | AT5G51830 | 65.823 | 316 | 106 | 1 | 15 | 328 | 23 | 338 | 1.07e-148 | 422 |
| MS.gene46881.t1 | AT5G51830 | 65.823 | 316 | 106 | 1 | 15 | 328 | 23 | 338 | 1.07e-148 | 422 |
| MS.gene46881.t1 | AT1G50390 | 64.912 | 171 | 31 | 1 | 160 | 330 | 1 | 142 | 1.56e-72 | 221 |
| MS.gene46881.t1 | AT3G54090 | 32.425 | 367 | 200 | 6 | 8 | 327 | 96 | 461 | 5.61e-52 | 178 |
| MS.gene46881.t1 | AT1G69200 | 30.556 | 288 | 178 | 3 | 41 | 307 | 246 | 532 | 1.14e-41 | 153 |
| MS.gene46881.t1 | AT1G17160 | 29.766 | 299 | 168 | 13 | 46 | 329 | 105 | 376 | 6.30e-19 | 87.0 |
| MS.gene46881.t1 | AT1G06730 | 26.510 | 298 | 194 | 8 | 47 | 329 | 132 | 419 | 1.96e-11 | 65.1 |
Find 98 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAGAAGTAACTTCAAATT+AGG | 0.127503 | 4.3:+36964086 | None:intergenic |
| CAGGCAAAAGTCTTCCATTA+TGG | 0.241889 | 4.3:-36964362 | MS.gene46881:CDS |
| CTTGTAACTCTTGGTGAAAA+TGG | 0.245978 | 4.3:-36964068 | MS.gene46881:CDS |
| GTAAGCAAATTCTCAGTATA+TGG | 0.266378 | 4.3:-36964205 | MS.gene46881:CDS |
| CTAAGCACTCACTTCAAGTA+TGG | 0.282419 | 4.3:+36963150 | None:intergenic |
| AGCAATTACTACTACCAAAA+AGG | 0.287374 | 4.3:-36962968 | MS.gene46881:CDS |
| CGGAGCCGGTGGCGGGGAGG+AGG | 0.303525 | 4.3:+36966047 | None:intergenic |
| AGTTCAAGATTGAGATCTTC+AGG | 0.313198 | 4.3:+36965680 | None:intergenic |
| GGGGAGGAGGGAAGCGTTGG+AGG | 0.336425 | 4.3:+36966060 | None:intergenic |
| GACTTTGTCCCAACCACTTC+CGG | 0.340286 | 4.3:-36965992 | MS.gene46881:CDS |
| ACGTTAGCTGGTGCGCCACC+GGG | 0.352955 | 4.3:+36965932 | None:intergenic |
| TTCAGGATGAAGCAAGGTTA+AGG | 0.361408 | 4.3:-36963020 | MS.gene46881:intron |
| TCCTTCGTTGGAGCTCTGTT+GGG | 0.375710 | 4.3:-36963193 | MS.gene46881:CDS |
| TGTCCTTAGCCTGATCAAAA+AGG | 0.382490 | 4.3:-36962914 | MS.gene46881:CDS |
| CTCCTCCCCGCCACCGGCTC+CGG | 0.383160 | 4.3:-36966046 | MS.gene46881:CDS |
| CAAGAAGTAACTTCAAATTA+GGG | 0.389192 | 4.3:+36964087 | None:intergenic |
| GACGTTAGCTGGTGCGCCAC+CGG | 0.390774 | 4.3:+36965931 | None:intergenic |
| TTCCTTCGTTGGAGCTCTGT+TGG | 0.395933 | 4.3:-36963194 | MS.gene46881:CDS |
| TCAAACTTATCGATCCATAA+TGG | 0.398109 | 4.3:+36964348 | None:intergenic |
| TCAGGATGAAGCAAGGTTAA+GGG | 0.406452 | 4.3:-36963019 | MS.gene46881:intron |
| CAAACCTCCGGCTACCTTTG+TGG | 0.410022 | 4.3:-36964247 | MS.gene46881:CDS |
| TATACTGAGAATTTGCTTAC+GGG | 0.413418 | 4.3:+36964208 | None:intergenic |
| AGGGAAGCGTTGGAGGCCAT+TGG | 0.423562 | 4.3:+36966067 | None:intergenic |
| CACAAAGGTAGCCGGAGGTT+TGG | 0.427528 | 4.3:+36964248 | None:intergenic |
| TCAGCTTCTGTTGGAAGAGC+TGG | 0.436019 | 4.3:+36962937 | None:intergenic |
| AAGTTACTTCTTGTAACTCT+TGG | 0.438912 | 4.3:-36964077 | MS.gene46881:CDS |
| ATATACTGAGAATTTGCTTA+CGG | 0.441354 | 4.3:+36964207 | None:intergenic |
| GTCTCCCTTGCTGAAGCTCC+CGG | 0.446910 | 4.3:-36965968 | MS.gene46881:CDS |
| GTCAACACTGTTGATACAAC+CGG | 0.456499 | 4.3:-36963226 | MS.gene46881:CDS |
| GTGGAGCTGGAATTTCTAAC+TGG | 0.457777 | 4.3:-36964152 | MS.gene46881:CDS |
| GGGAGACGCCGGAAGTGGTT+GGG | 0.463516 | 4.3:+36965984 | None:intergenic |
| ACAGCGATCGCGACGTTAGC+TGG | 0.464087 | 4.3:+36965920 | None:intergenic |
| GGTGCTGGTGATTCCTTCGT+TGG | 0.469003 | 4.3:-36963205 | MS.gene46881:CDS |
| ATGAGACCGGAGCCGGTGGC+GGG | 0.469238 | 4.3:+36966040 | None:intergenic |
| TCCGGTCTCATCGTCAGCTT+CGG | 0.470421 | 4.3:-36966028 | MS.gene46881:CDS |
| ATTTGCTTACGGGCTTCCTC+TGG | 0.470871 | 4.3:+36964218 | None:intergenic |
| AATTCGGTCACATGCTCGCC+GGG | 0.475756 | 4.3:-36965847 | MS.gene46881:CDS |
| TAAGCAAATTCTCAGTATAT+GGG | 0.478304 | 4.3:-36964204 | MS.gene46881:CDS |
| CAAGGTCAGTGATGTGGAGC+TGG | 0.482074 | 4.3:-36964165 | MS.gene46881:CDS |
| TGCACAAATCAGAATTTCAA+AGG | 0.482727 | 4.3:-36963268 | MS.gene46881:intron |
| GGCGGGGAGGAGGGAAGCGT+TGG | 0.487671 | 4.3:+36966057 | None:intergenic |
| TCTGCCTTCGTCGGAAAACT+CGG | 0.489892 | 4.3:-36965878 | MS.gene46881:CDS |
| AGCAAGGGAGACGCCGGAAG+TGG | 0.502504 | 4.3:+36965979 | None:intergenic |
| GGAGCCGGTGGCGGGGAGGA+GGG | 0.504246 | 4.3:+36966048 | None:intergenic |
| CTTAAATTTGCCAATGCATG+TGG | 0.505670 | 4.3:-36962991 | MS.gene46881:CDS |
| CTAAGGACATCAGCTTCTGT+TGG | 0.510882 | 4.3:+36962928 | None:intergenic |
| GCTTCCCTCCTCCCCGCCAC+CGG | 0.518084 | 4.3:-36966052 | MS.gene46881:CDS |
| AAACTCGGTGATGATGAATT+CGG | 0.518336 | 4.3:-36965863 | MS.gene46881:CDS |
| AGGGAGACGCCGGAAGTGGT+TGG | 0.518704 | 4.3:+36965983 | None:intergenic |
| ACTTCAAATTAGGGTGCCAC+AGG | 0.521764 | 4.3:+36964096 | None:intergenic |
| TGGATCGATAAGTTTGATTG+TGG | 0.524813 | 4.3:-36964342 | MS.gene46881:CDS |
| GAAAACAACGTGAGAGGTGA+TGG | 0.526062 | 4.3:-36965815 | MS.gene46881:CDS |
| CCCGGTTTCCTCAAAGCCCC+CGG | 0.527234 | 4.3:-36965950 | MS.gene46881:CDS |
| ATGGAAGTTGCTAAGGAGGC+AGG | 0.531001 | 4.3:-36964290 | MS.gene46881:CDS |
| TGAGACCGGAGCCGGTGGCG+GGG | 0.532555 | 4.3:+36966041 | None:intergenic |
| GAATTCGGTCACATGCTCGC+CGG | 0.537803 | 4.3:-36965848 | MS.gene46881:CDS |
| TTACGGGCTTCCTCTGGTGA+AGG | 0.541696 | 4.3:+36964224 | None:intergenic |
| AGTAATTGCTCCACATGCAT+TGG | 0.546129 | 4.3:+36962981 | None:intergenic |
| CAAAGGCGCTCGTACTGCAC+TGG | 0.546743 | 4.3:-36965780 | MS.gene46881:CDS |
| GAAGGCAATGGAAGTTGCTA+AGG | 0.548461 | 4.3:-36964297 | MS.gene46881:CDS |
| GCCGAAGCTGACGATGAGAC+CGG | 0.549381 | 4.3:+36966027 | None:intergenic |
| GATGAGACCGGAGCCGGTGG+CGG | 0.549666 | 4.3:+36966039 | None:intergenic |
| AGCTTCAGCAAGGGAGACGC+CGG | 0.551078 | 4.3:+36965973 | None:intergenic |
| GTGAAGGCCACAAAGGTAGC+CGG | 0.553387 | 4.3:+36964240 | None:intergenic |
| TTCAGATGTGCTGATCTGCA+TGG | 0.553886 | 4.3:+36964317 | None:intergenic |
| CGTTAGCTGGTGCGCCACCG+GGG | 0.554704 | 4.3:+36965933 | None:intergenic |
| ACCTTTGTGGCCTTCACCAG+AGG | 0.557240 | 4.3:-36964234 | MS.gene46881:CDS |
| GCGATCGCTGTTTCACGACT+CGG | 0.559904 | 4.3:-36965908 | MS.gene46881:CDS |
| ACTGTTGATACAACCGGTGC+TGG | 0.561415 | 4.3:-36963220 | MS.gene46881:CDS |
| TTAAATTTCAGGATGAAGCA+AGG | 0.562028 | 4.3:-36963026 | MS.gene46881:intron |
| AACGAAGGAATCACCAGCAC+CGG | 0.567026 | 4.3:+36963207 | None:intergenic |
| GGCAATGGAAGTTGCTAAGG+AGG | 0.567696 | 4.3:-36964294 | MS.gene46881:CDS |
| TCTCTTATGATCCAAACCTC+CGG | 0.571114 | 4.3:-36964259 | MS.gene46881:CDS |
| ATGCAGATCAGCACATCTGA+AGG | 0.574430 | 4.3:-36964315 | MS.gene46881:CDS |
| GCTGACGATGAGACCGGAGC+CGG | 0.576648 | 4.3:+36966033 | None:intergenic |
| GATGGTATCAACTTTGACAA+AGG | 0.579902 | 4.3:-36965797 | MS.gene46881:CDS |
| GACCGGAGCCGGTGGCGGGG+AGG | 0.584412 | 4.3:+36966044 | None:intergenic |
| TCCTCTGGTGAAGGCCACAA+AGG | 0.588528 | 4.3:+36964233 | None:intergenic |
| GACGATGAGACCGGAGCCGG+TGG | 0.591172 | 4.3:+36966036 | None:intergenic |
| ATCAGCACATCTGAAGGCAA+TGG | 0.591539 | 4.3:-36964309 | MS.gene46881:CDS |
| TTGTATCAACAGTGTTGACA+TGG | 0.598391 | 4.3:+36963230 | None:intergenic |
| GCCCAACAGAGCTCCAACGA+AGG | 0.601582 | 4.3:+36963192 | None:intergenic |
| GTTAGCTGGTGCGCCACCGG+GGG | 0.601855 | 4.3:+36965934 | None:intergenic |
| TTGAAAGAAAACAACGTGAG+AGG | 0.604412 | 4.3:-36965821 | MS.gene46881:CDS |
| TCTCATCAAGGTCAGTGATG+TGG | 0.606659 | 4.3:-36964171 | MS.gene46881:CDS |
| CATGAACTCACGCTCTCCAT+CGG | 0.608461 | 4.3:+36965739 | None:intergenic |
| TTTGTTACTCTACGCGCCGA+TGG | 0.610292 | 4.3:-36965755 | MS.gene46881:CDS |
| GGCGGTAAATCTGCCTTCGT+CGG | 0.612156 | 4.3:-36965887 | MS.gene46881:CDS |
| GGACAAGGCTGATCTCATCA+AGG | 0.638589 | 4.3:-36964183 | MS.gene46881:CDS |
| GGAAACCGGGAGCTTCAGCA+AGG | 0.638648 | 4.3:+36965963 | None:intergenic |
| ATGCTTCTGCTCTCTCCCTG+TGG | 0.639152 | 4.3:-36964112 | MS.gene46881:CDS |
| GAAACCGGGAGCTTCAGCAA+GGG | 0.654816 | 4.3:+36965964 | None:intergenic |
| GTAAGAAGCATATCAGCACT+CGG | 0.662701 | 4.3:+36965704 | None:intergenic |
| AATTCTCAGTATATGGGACA+AGG | 0.663851 | 4.3:-36964198 | MS.gene46881:CDS |
| ATCGCTGTTTCACGACTCGG+CGG | 0.669298 | 4.3:-36965905 | MS.gene46881:CDS |
| CTTCAAATTAGGGTGCCACA+GGG | 0.672272 | 4.3:+36964097 | None:intergenic |
| AAGGCCACAAAGGTAGCCGG+AGG | 0.689884 | 4.3:+36964243 | None:intergenic |
| TGGTTCCAGATATTATACAA+AGG | 0.703810 | 4.3:-36964048 | MS.gene46881:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTTTACGTTATATAT+TGG | + | chr4.3:36963472-36963491 | None:intergenic | 10.0% |
| !! | AATAAGTAAAATTGAAGATT+AGG | + | chr4.3:36964958-36964977 | None:intergenic | 15.0% |
| !! | AGAATAAAAAAAAAAAGGTT+AGG | + | chr4.3:36964243-36964262 | None:intergenic | 15.0% |
| !! | ATATACTATTATGACTTAAT+TGG | - | chr4.3:36963950-36963969 | MS.gene46881:intron | 15.0% |
| !!! | AGTTGATTTTATTAGTTTTA+GGG | - | chr4.3:36964002-36964021 | MS.gene46881:intron | 15.0% |
| !!! | TAGTTGATTTTATTAGTTTT+AGG | - | chr4.3:36964001-36964020 | MS.gene46881:intron | 15.0% |
| !!! | TTAATTTCTTTGTTTTTCAA+AGG | + | chr4.3:36964126-36964145 | None:intergenic | 15.0% |
| !! | AATATTTATACGATCAGAAA+AGG | - | chr4.3:36963522-36963541 | MS.gene46881:intron | 20.0% |
| !! | TATCCATACTTGTATTATAT+TGG | - | chr4.3:36965863-36965882 | MS.gene46881:CDS | 20.0% |
| !!! | ATTATGAAACATGATTTTTC+AGG | - | chr4.3:36964592-36964611 | MS.gene46881:intron | 20.0% |
| !!! | TCATAATTCAATTACTCTTT+TGG | + | chr4.3:36964579-36964598 | None:intergenic | 20.0% |
| !!! | TTTTACCTTTGTATAATATC+TGG | + | chr4.3:36964933-36964952 | None:intergenic | 20.0% |
| !!! | TTTTTCACGTTTTAAATTTC+AGG | - | chr4.3:36965936-36965955 | MS.gene46881:CDS | 20.0% |
| !!! | TTTTTGATCTGATTTTTTTG+TGG | - | chr4.3:36963370-36963389 | MS.gene46881:intron | 20.0% |
| ! | AAAAGGTGATATATACGATA+TGG | - | chr4.3:36963539-36963558 | MS.gene46881:intron | 25.0% |
| ! | AAAGGTGATATATACGATAT+GGG | - | chr4.3:36963540-36963559 | MS.gene46881:intron | 25.0% |
| ! | AACTATAGTGAATCAAAAAC+AGG | + | chr4.3:36963851-36963870 | None:intergenic | 25.0% |
| ! | ACAAGAAGTAACTTCAAATT+AGG | + | chr4.3:36964890-36964909 | None:intergenic | 25.0% |
| ! | ACACCAATATAATACAAGTA+TGG | + | chr4.3:36965869-36965888 | None:intergenic | 25.0% |
| ! | CAAGAAGTAACTTCAAATTA+GGG | + | chr4.3:36964889-36964908 | None:intergenic | 25.0% |
| ! | GGTTCAAATTCAATTGAAAA+AGG | - | chr4.3:36965294-36965313 | MS.gene46881:intron | 25.0% |
| ! | TAAGCAAATTCTCAGTATAT+GGG | - | chr4.3:36964769-36964788 | MS.gene46881:intron | 25.0% |
| ! | TCCATTCAATAACTTAACTA+GGG | - | chr4.3:36965409-36965428 | MS.gene46881:intron | 25.0% |
| ! | TCTAACGAATCAAAATACAA+AGG | + | chr4.3:36963808-36963827 | None:intergenic | 25.0% |
| ! | TTAAGAATTCGAATACCAAA+CGG | - | chr4.3:36964381-36964400 | MS.gene46881:intron | 25.0% |
| ! | TTCCATTCAATAACTTAACT+AGG | - | chr4.3:36965408-36965427 | MS.gene46881:intron | 25.0% |
| ! | TTGTTTACAGTTGAAAAGTA+AGG | + | chr4.3:36965358-36965377 | None:intergenic | 25.0% |
| !! | AACATGCAATATTGTTATTG+AGG | + | chr4.3:36965623-36965642 | None:intergenic | 25.0% |
| !! | AATCAAAATCTGCATTGTTT+TGG | - | chr4.3:36964480-36964499 | MS.gene46881:intron | 25.0% |
| !! | AGTTTATAGAGTGTTAATTG+TGG | + | chr4.3:36964101-36964120 | None:intergenic | 25.0% |
| !! | ATATACTGAGAATTTGCTTA+CGG | + | chr4.3:36964769-36964788 | None:intergenic | 25.0% |
| !! | GGTAAATGTGTGTATAATTT+TGG | - | chr4.3:36963971-36963990 | MS.gene46881:intron | 25.0% |
| !!! | GTTTTAGAAAGTATGTTAAG+TGG | - | chr4.3:36965640-36965659 | MS.gene46881:intron | 25.0% |
| !!! | TTTTCTAAAATATATGCACG+TGG | + | chr4.3:36964159-36964178 | None:intergenic | 25.0% |
| AAGAATTTGAACCTAACTAC+TGG | + | chr4.3:36965251-36965270 | None:intergenic | 30.0% | |
| AAGTTACTTCTTGTAACTCT+TGG | - | chr4.3:36964896-36964915 | MS.gene46881:intron | 30.0% | |
| AGCAATTACTACTACCAAAA+AGG | - | chr4.3:36966005-36966024 | MS.gene46881:CDS | 30.0% | |
| ATGTGTGCAAGTAGTAAAAT+TGG | - | chr4.3:36964324-36964343 | MS.gene46881:CDS | 30.0% | |
| CATTCAATAACTTAACTAGG+GGG | - | chr4.3:36965411-36965430 | MS.gene46881:intron | 30.0% | |
| CCATTCAATAACTTAACTAG+GGG | - | chr4.3:36965410-36965429 | MS.gene46881:intron | 30.0% | |
| GCAATTACTACTACCAAAAA+GGG | - | chr4.3:36966006-36966025 | MS.gene46881:CDS | 30.0% | |
| GGTAGAAAATTGATCAAGAT+TGG | + | chr4.3:36964511-36964530 | None:intergenic | 30.0% | |
| GTAAGCAAATTCTCAGTATA+TGG | - | chr4.3:36964768-36964787 | MS.gene46881:intron | 30.0% | |
| TATCCAAACAAGATCATCAT+TGG | + | chr4.3:36965062-36965081 | None:intergenic | 30.0% | |
| TCAAACTTATCGATCCATAA+TGG | + | chr4.3:36964628-36964647 | None:intergenic | 30.0% | |
| TGCACAAATCAGAATTTCAA+AGG | - | chr4.3:36965705-36965724 | MS.gene46881:CDS | 30.0% | |
| TGGTTCCAGATATTATACAA+AGG | - | chr4.3:36964925-36964944 | MS.gene46881:intron | 30.0% | |
| TTAAAAACCGAGCTTGAATT+TGG | + | chr4.3:36964449-36964468 | None:intergenic | 30.0% | |
| TTAAATTTCAGGATGAAGCA+AGG | - | chr4.3:36965947-36965966 | MS.gene46881:CDS | 30.0% | |
| TTACAGTTGAAAAGTAAGGT+GGG | + | chr4.3:36965354-36965373 | None:intergenic | 30.0% | |
| TTATCGTGACGTTTATTGAT+TGG | - | chr4.3:36963737-36963756 | MS.gene46881:intron | 30.0% | |
| TTGAATTTGAACCTAACTAC+TGG | + | chr4.3:36965287-36965306 | None:intergenic | 30.0% | |
| TTGGATCATCTGATCTTAAT+TGG | + | chr4.3:36964430-36964449 | None:intergenic | 30.0% | |
| TTTACAGTTGAAAAGTAAGG+TGG | + | chr4.3:36965355-36965374 | None:intergenic | 30.0% | |
| TTTCCAATGATGATCTTGTT+TGG | - | chr4.3:36965056-36965075 | MS.gene46881:intron | 30.0% | |
| ! | AATTCTGATTTGTGCAGAAA+AGG | + | chr4.3:36965701-36965720 | None:intergenic | 30.0% |
| ! | TATACTGAGAATTTGCTTAC+GGG | + | chr4.3:36964768-36964787 | None:intergenic | 30.0% |
| ! | TATCACACTATGTTTGAAGT+GGG | + | chr4.3:36963662-36963681 | None:intergenic | 30.0% |
| ! | TCTTTTGGCATGAAAAAAAC+TGG | + | chr4.3:36964564-36964583 | None:intergenic | 30.0% |
| AAACATAGTGTGATACACTG+TGG | - | chr4.3:36963667-36963686 | MS.gene46881:intron | 35.0% | |
| AAATGCTTATGCCAGTAGTT+AGG | - | chr4.3:36965237-36965256 | MS.gene46881:intron | 35.0% | |
| AATATATGCACGTGGTTTCT+AGG | + | chr4.3:36964151-36964170 | None:intergenic | 35.0% | |
| AATTCTCAGTATATGGGACA+AGG | - | chr4.3:36964775-36964794 | MS.gene46881:intron | 35.0% | |
| ACTACAATCTAAATGCAGAG+AGG | + | chr4.3:36965575-36965594 | None:intergenic | 35.0% | |
| AGATGATCCAAATTCAAGCT+CGG | - | chr4.3:36964439-36964458 | MS.gene46881:intron | 35.0% | |
| AGTACTACAATACCCTATGT+AGG | + | chr4.3:36965028-36965047 | None:intergenic | 35.0% | |
| AGTTCAAGATTGAGATCTTC+AGG | + | chr4.3:36963296-36963315 | None:intergenic | 35.0% | |
| CCAGCAAGTTATAGAGAAAA+AGG | + | chr4.3:36964981-36965000 | None:intergenic | 35.0% | |
| CCCCTAGTTAAGTTATTGAA+TGG | + | chr4.3:36965413-36965432 | None:intergenic | 35.0% | |
| CTACAATCTAAATGCAGAGA+GGG | + | chr4.3:36965574-36965593 | None:intergenic | 35.0% | |
| CTTAAATTTGCCAATGCATG+TGG | - | chr4.3:36965982-36966001 | MS.gene46881:CDS | 35.0% | |
| CTTGTAACTCTTGGTGAAAA+TGG | - | chr4.3:36964905-36964924 | MS.gene46881:intron | 35.0% | |
| GATGGTATCAACTTTGACAA+AGG | - | chr4.3:36963176-36963195 | MS.gene46881:CDS | 35.0% | |
| GCATTATTGCATGCAAATGA+AGG | - | chr4.3:36964074-36964093 | MS.gene46881:CDS | 35.0% | |
| GTATCACACTATGTTTGAAG+TGG | + | chr4.3:36963663-36963682 | None:intergenic | 35.0% | |
| TGGATCGATAAGTTTGATTG+TGG | - | chr4.3:36964631-36964650 | MS.gene46881:intron | 35.0% | |
| TTGAAAGAAAACAACGTGAG+AGG | - | chr4.3:36963152-36963171 | MS.gene46881:intron | 35.0% | |
| TTTCACTCTTAGCCTACATA+GGG | - | chr4.3:36965013-36965032 | MS.gene46881:intron | 35.0% | |
| ! | AAACTCGGTGATGATGAATT+CGG | - | chr4.3:36963110-36963129 | MS.gene46881:intron | 35.0% |
| ! | GCAAGTAGTAAAATTGGTCT+AGG | - | chr4.3:36964330-36964349 | MS.gene46881:CDS | 35.0% |
| ! | TAAAATTGGTCTAGGTCACT+AGG | - | chr4.3:36964338-36964357 | MS.gene46881:CDS | 35.0% |
| !! | CATAGGGTATTGTAGTACTT+TGG | - | chr4.3:36965029-36965048 | MS.gene46881:intron | 35.0% |
| !! | CCTTTTTCTCTATAACTTGC+TGG | - | chr4.3:36964978-36964997 | MS.gene46881:intron | 35.0% |
| !! | GTTGTTTTCTTTCAAGATCC+CGG | + | chr4.3:36963147-36963166 | None:intergenic | 35.0% |
| !! | TTGTATCAACAGTGTTGACA+TGG | + | chr4.3:36965746-36965765 | None:intergenic | 35.0% |
| !!! | ACGCTTTTTTTTGGTGAAGT+AGG | - | chr4.3:36963622-36963641 | MS.gene46881:intron | 35.0% |
| AAACCGCGCATGATATAGTA+GGG | + | chr4.3:36964195-36964214 | None:intergenic | 40.0% | |
| AATAACTTAACTAGGGGGAG+GGG | - | chr4.3:36965416-36965435 | MS.gene46881:intron | 40.0% | |
| AGTAATTGCTCCACATGCAT+TGG | + | chr4.3:36965995-36966014 | None:intergenic | 40.0% | |
| ATACATTCACACCTGTGCTA+TGG | - | chr4.3:36965492-36965511 | MS.gene46881:intron | 40.0% | |
| CAATAACTTAACTAGGGGGA+GGG | - | chr4.3:36965415-36965434 | MS.gene46881:intron | 40.0% | |
| CAGGCAAAAGTCTTCCATTA+TGG | - | chr4.3:36964611-36964630 | MS.gene46881:intron | 40.0% | |
| CTAAGCACTCACTTCAAGTA+TGG | + | chr4.3:36965826-36965845 | None:intergenic | 40.0% | |
| CTTGCACACATTTGATGTGT+CGG | + | chr4.3:36964315-36964334 | None:intergenic | 40.0% | |
| CTTTCACTCTTAGCCTACAT+AGG | - | chr4.3:36965012-36965031 | MS.gene46881:intron | 40.0% | |
| GAATTCGAATACCAAACGGT+TGG | - | chr4.3:36964385-36964404 | MS.gene46881:intron | 40.0% | |
| GATGAGAGAGTGATGGTTTA+AGG | - | chr4.3:36964032-36964051 | MS.gene46881:intron | 40.0% | |
| GGTGATATATACGATATGGG+TGG | - | chr4.3:36963543-36963562 | MS.gene46881:intron | 40.0% | |
| GTCAACACTGTTGATACAAC+CGG | - | chr4.3:36965747-36965766 | MS.gene46881:CDS | 40.0% | |
| TAAACCGCGCATGATATAGT+AGG | + | chr4.3:36964196-36964215 | None:intergenic | 40.0% | |
| TCAATAACTTAACTAGGGGG+AGG | - | chr4.3:36965414-36965433 | MS.gene46881:intron | 40.0% | |
| TCAATTCGATGAGAGAGTGA+TGG | - | chr4.3:36964025-36964044 | MS.gene46881:intron | 40.0% | |
| TCAGGATGAAGCAAGGTTAA+GGG | - | chr4.3:36965954-36965973 | MS.gene46881:CDS | 40.0% | |
| TCTCTTATGATCCAAACCTC+CGG | - | chr4.3:36964714-36964733 | MS.gene46881:intron | 40.0% | |
| TGGTTAATCCCACACATTAG+AGG | - | chr4.3:36964267-36964286 | MS.gene46881:CDS | 40.0% | |
| TGTCCTTAGCCTGATCAAAA+AGG | - | chr4.3:36966059-36966078 | MS.gene46881:CDS | 40.0% | |
| TTCAGGATGAAGCAAGGTTA+AGG | - | chr4.3:36965953-36965972 | MS.gene46881:CDS | 40.0% | |
| TTGCACACATTTGATGTGTC+GGG | + | chr4.3:36964314-36964333 | None:intergenic | 40.0% | |
| ! | ATGCCTTTTTGATCAGGCTA+AGG | + | chr4.3:36966065-36966084 | None:intergenic | 40.0% |
| ! | CTTAATTGGATCAAAAGCGC+TGG | + | chr4.3:36964416-36964435 | None:intergenic | 40.0% |
| ! | GAGGGGCTTACTATATTTTG+TGG | - | chr4.3:36965433-36965452 | MS.gene46881:intron | 40.0% |
| ! | GTAAGAAGCATATCAGCACT+CGG | + | chr4.3:36963272-36963291 | None:intergenic | 40.0% |
| ! | GTACTGTTGTGTTGCTATCA+TGG | - | chr4.3:36963767-36963786 | MS.gene46881:intron | 40.0% |
| ! | GTGACGTTTATTGATTGGAG+TGG | - | chr4.3:36963742-36963761 | MS.gene46881:intron | 40.0% |
| !! | TTTTTGGTGAAGTAGGCAAG+TGG | - | chr4.3:36963629-36963648 | MS.gene46881:intron | 40.0% |
| !!! | CTGTGGCTTACGCTTTTTTT+TGG | - | chr4.3:36963613-36963632 | MS.gene46881:intron | 40.0% |
| ATCAGCACATCTGAAGGCAA+TGG | - | chr4.3:36964664-36964683 | MS.gene46881:intron | 45.0% | |
| ATGCAGATCAGCACATCTGA+AGG | - | chr4.3:36964658-36964677 | MS.gene46881:intron | 45.0% | |
| CAATCTAAATGCAGAGAGGG+AGG | + | chr4.3:36965571-36965590 | None:intergenic | 45.0% | |
| CCCACACATTAGAGGAATTG+CGG | - | chr4.3:36964275-36964294 | MS.gene46881:CDS | 45.0% | |
| CCGCAATTCCTCTAATGTGT+GGG | + | chr4.3:36964278-36964297 | None:intergenic | 45.0% | |
| CTAAGGACATCAGCTTCTGT+TGG | + | chr4.3:36966048-36966067 | None:intergenic | 45.0% | |
| GAAAACAACGTGAGAGGTGA+TGG | - | chr4.3:36963158-36963177 | MS.gene46881:intron | 45.0% | |
| GAAGGCAATGGAAGTTGCTA+AGG | - | chr4.3:36964676-36964695 | MS.gene46881:intron | 45.0% | |
| GGTCTATCTAGATCCACCTA+GGG | + | chr4.3:36963451-36963470 | None:intergenic | 45.0% | |
| GTGAAGTAGGCAAGTGGTTT+GGG | - | chr4.3:36963635-36963654 | MS.gene46881:intron | 45.0% | |
| GTGGAGCTGGAATTTCTAAC+TGG | - | chr4.3:36964821-36964840 | MS.gene46881:intron | 45.0% | |
| TAGCCCTACTATATCATGCG+CGG | - | chr4.3:36964189-36964208 | MS.gene46881:CDS | 45.0% | |
| TCCGCAATTCCTCTAATGTG+TGG | + | chr4.3:36964279-36964298 | None:intergenic | 45.0% | |
| TCTCATCAAGGTCAGTGATG+TGG | - | chr4.3:36964802-36964821 | MS.gene46881:intron | 45.0% | |
| TGGTCTATCTAGATCCACCT+AGG | + | chr4.3:36963452-36963471 | None:intergenic | 45.0% | |
| ! | ACGTGTTTTCCTTGCTCAGA+GGG | - | chr4.3:36963590-36963609 | MS.gene46881:intron | 45.0% |
| ! | ACTTCAAATTAGGGTGCCAC+AGG | + | chr4.3:36964880-36964899 | None:intergenic | 45.0% |
| ! | AGCTGGAATTGCTCCCTTTT+TGG | + | chr4.3:36966022-36966041 | None:intergenic | 45.0% |
| ! | CTTCAAATTAGGGTGCCACA+GGG | + | chr4.3:36964879-36964898 | None:intergenic | 45.0% |
| ! | GTTTCACGCGATTTTCCATG+CGG | - | chr4.3:36963420-36963439 | MS.gene46881:intron | 45.0% |
| ! | TTCAGATGTGCTGATCTGCA+TGG | + | chr4.3:36964659-36964678 | None:intergenic | 45.0% |
| !! | TGGCTTTAGTGGACTTCTCA+TGG | - | chr4.3:36965512-36965531 | MS.gene46881:intron | 45.0% |
| !! | ATAAAAGAATAAAAAAAAAA+AGG | + | chr4.3:36964248-36964267 | None:intergenic | 5.0% |
| !! | TATATTTATTTATCTAAAAA+AGG | + | chr4.3:36963699-36963718 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTATTCTTTTA+TGG | - | chr4.3:36964247-36964266 | MS.gene46881:CDS | 5.0% |
| AACGAAGGAATCACCAGCAC+CGG | + | chr4.3:36965769-36965788 | None:intergenic | 50.0% | |
| ACTGTTGATACAACCGGTGC+TGG | - | chr4.3:36965753-36965772 | MS.gene46881:CDS | 50.0% | |
| ATGGAAGTTGCTAAGGAGGC+AGG | - | chr4.3:36964683-36964702 | MS.gene46881:intron | 50.0% | |
| ATTTGCTTACGGGCTTCCTC+TGG | + | chr4.3:36964758-36964777 | None:intergenic | 50.0% | |
| CATGAACTCACGCTCTCCAT+CGG | + | chr4.3:36963237-36963256 | None:intergenic | 50.0% | |
| CTAGGTCACTAGGTGAGTAG+TGG | - | chr4.3:36964348-36964367 | MS.gene46881:CDS | 50.0% | |
| CTCACACGCGCATACAAAAC+AGG | + | chr4.3:36964532-36964551 | None:intergenic | 50.0% | |
| GACTTTGTCCCAACCACTTC+CGG | - | chr4.3:36962981-36963000 | MS.gene46881:CDS | 50.0% | |
| GGACAAGGCTGATCTCATCA+AGG | - | chr4.3:36964790-36964809 | MS.gene46881:intron | 50.0% | |
| GGCAATGGAAGTTGCTAAGG+AGG | - | chr4.3:36964679-36964698 | MS.gene46881:intron | 50.0% | |
| GGTGAAGTAGGCAAGTGGTT+TGG | - | chr4.3:36963634-36963653 | MS.gene46881:intron | 50.0% | |
| GTCCACTAAAGCCATAGCAC+AGG | + | chr4.3:36965506-36965525 | None:intergenic | 50.0% | |
| GTGGTGTGTTTGTCACGTGA+GGG | - | chr4.3:36963562-36963581 | MS.gene46881:intron | 50.0% | |
| TCAGCTTCTGTTGGAAGAGC+TGG | + | chr4.3:36966039-36966058 | None:intergenic | 50.0% | |
| TCCTTCGTTGGAGCTCTGTT+GGG | - | chr4.3:36965780-36965799 | MS.gene46881:CDS | 50.0% | |
| TCTGCCTTCGTCGGAAAACT+CGG | - | chr4.3:36963095-36963114 | MS.gene46881:intron | 50.0% | |
| TTCCTTCGTTGGAGCTCTGT+TGG | - | chr4.3:36965779-36965798 | MS.gene46881:CDS | 50.0% | |
| TTGTATGCGCGTGTGAGTGA+GGG | - | chr4.3:36964535-36964554 | MS.gene46881:intron | 50.0% | |
| TTTGTATGCGCGTGTGAGTG+AGG | - | chr4.3:36964534-36964553 | MS.gene46881:intron | 50.0% | |
| TTTGTTACTCTACGCGCCGA+TGG | - | chr4.3:36963218-36963237 | MS.gene46881:CDS | 50.0% | |
| ! | ATCACCGAGTTTTCCGACGA+AGG | + | chr4.3:36963102-36963121 | None:intergenic | 50.0% |
| ! | CACGTGTTTTCCTTGCTCAG+AGG | - | chr4.3:36963589-36963608 | MS.gene46881:intron | 50.0% |
| !! | CACCTGTGCTATGGCTTTAG+TGG | - | chr4.3:36965501-36965520 | MS.gene46881:intron | 50.0% |
| AATTCGGTCACATGCTCGCC+GGG | - | chr4.3:36963126-36963145 | MS.gene46881:intron | 55.0% | |
| ACCTTTGTGGCCTTCACCAG+AGG | - | chr4.3:36964739-36964758 | MS.gene46881:intron | 55.0% | |
| ATGCTTCTGCTCTCTCCCTG+TGG | - | chr4.3:36964861-36964880 | MS.gene46881:intron | 55.0% | |
| CAAACCTCCGGCTACCTTTG+TGG | - | chr4.3:36964726-36964745 | MS.gene46881:intron | 55.0% | |
| CAAGGTCAGTGATGTGGAGC+TGG | - | chr4.3:36964808-36964827 | MS.gene46881:intron | 55.0% | |
| CACAAAGGTAGCCGGAGGTT+TGG | + | chr4.3:36964728-36964747 | None:intergenic | 55.0% | |
| CACTAGGTGAGTAGTGGTGG+TGG | - | chr4.3:36964354-36964373 | MS.gene46881:CDS | 55.0% | |
| CGCTGGAATCACCAACCGTT+TGG | + | chr4.3:36964399-36964418 | None:intergenic | 55.0% | |
| GAAACCGGGAGCTTCAGCAA+GGG | + | chr4.3:36963012-36963031 | None:intergenic | 55.0% | |
| GAATTCGGTCACATGCTCGC+CGG | - | chr4.3:36963125-36963144 | MS.gene46881:intron | 55.0% | |
| GGCGGTAAATCTGCCTTCGT+CGG | - | chr4.3:36963086-36963105 | MS.gene46881:intron | 55.0% | |
| GGTCACTAGGTGAGTAGTGG+TGG | - | chr4.3:36964351-36964370 | MS.gene46881:CDS | 55.0% | |
| GGTGGTGTGTTTGTCACGTG+AGG | - | chr4.3:36963561-36963580 | MS.gene46881:intron | 55.0% | |
| GTGAAGGCCACAAAGGTAGC+CGG | + | chr4.3:36964736-36964755 | None:intergenic | 55.0% | |
| TCCGGTCTCATCGTCAGCTT+CGG | - | chr4.3:36962945-36962964 | MS.gene46881:CDS | 55.0% | |
| TCCTCTGGTGAAGGCCACAA+AGG | + | chr4.3:36964743-36964762 | None:intergenic | 55.0% | |
| TTACGGGCTTCCTCTGGTGA+AGG | + | chr4.3:36964752-36964771 | None:intergenic | 55.0% | |
| TTTCCTTGCTCAGAGGGCTG+TGG | - | chr4.3:36963596-36963615 | MS.gene46881:intron | 55.0% | |
| ! | ATCGCTGTTTCACGACTCGG+CGG | - | chr4.3:36963068-36963087 | MS.gene46881:intron | 55.0% |
| ! | CACGCGATTTTCCATGCGGT+GGG | - | chr4.3:36963424-36963443 | MS.gene46881:intron | 55.0% |
| ! | GCGATCGCTGTTTCACGACT+CGG | - | chr4.3:36963065-36963084 | MS.gene46881:intron | 55.0% |
| ! | TCACGCGATTTTCCATGCGG+TGG | - | chr4.3:36963423-36963442 | MS.gene46881:intron | 55.0% |
| !! | GGTGCTGGTGATTCCTTCGT+TGG | - | chr4.3:36965768-36965787 | MS.gene46881:CDS | 55.0% |
| !! | TAGGTGAGTAGTGGTGGTGG+TGG | - | chr4.3:36964357-36964376 | MS.gene46881:CDS | 55.0% |
| AAGCCACAGCCCTCTGAGCA+AGG | + | chr4.3:36963602-36963621 | None:intergenic | 60.0% | |
| AAGGCCACAAAGGTAGCCGG+AGG | + | chr4.3:36964733-36964752 | None:intergenic | 60.0% | |
| ACAGCGATCGCGACGTTAGC+TGG | + | chr4.3:36963056-36963075 | None:intergenic | 60.0% | |
| AGCTTCAGCAAGGGAGACGC+CGG | + | chr4.3:36963003-36963022 | None:intergenic | 60.0% | |
| GCCCAACAGAGCTCCAACGA+AGG | + | chr4.3:36965784-36965803 | None:intergenic | 60.0% | |
| GCCGAAGCTGACGATGAGAC+CGG | + | chr4.3:36962949-36962968 | None:intergenic | 60.0% | |
| GGAAACCGGGAGCTTCAGCA+AGG | + | chr4.3:36963013-36963032 | None:intergenic | 60.0% | |
| GTCTCCCTTGCTGAAGCTCC+CGG | - | chr4.3:36963005-36963024 | MS.gene46881:CDS | 60.0% | |
| TTTCCATGCGGTGGGTCCCT+AGG | - | chr4.3:36963432-36963451 | MS.gene46881:intron | 60.0% | |
| !! | ACCGGGGGCTTTGAGGAAAC+CGG | + | chr4.3:36963027-36963046 | None:intergenic | 60.0% |
| !! | CAAAGGCGCTCGTACTGCAC+TGG | - | chr4.3:36963193-36963212 | MS.gene46881:CDS | 60.0% |
| ACGTTAGCTGGTGCGCCACC+GGG | + | chr4.3:36963044-36963063 | None:intergenic | 65.0% | |
| AGCAAGGGAGACGCCGGAAG+TGG | + | chr4.3:36962997-36963016 | None:intergenic | 65.0% | |
| AGGGAGACGCCGGAAGTGGT+TGG | + | chr4.3:36962993-36963012 | None:intergenic | 65.0% | |
| CCCGGTTTCCTCAAAGCCCC+CGG | - | chr4.3:36963023-36963042 | MS.gene46881:intron | 65.0% | |
| GACGTTAGCTGGTGCGCCAC+CGG | + | chr4.3:36963045-36963064 | None:intergenic | 65.0% | |
| GCTGACGATGAGACCGGAGC+CGG | + | chr4.3:36962943-36962962 | None:intergenic | 65.0% | |
| GGGAGACGCCGGAAGTGGTT+GGG | + | chr4.3:36962992-36963011 | None:intergenic | 65.0% | |
| GGTTTCCTCAAAGCCCCCGG+TGG | - | chr4.3:36963026-36963045 | MS.gene46881:intron | 65.0% | |
| !! | CCGGGGGCTTTGAGGAAACC+GGG | + | chr4.3:36963026-36963045 | None:intergenic | 65.0% |
| ATGAGACCGGAGCCGGTGGC+GGG | + | chr4.3:36962936-36962955 | None:intergenic | 70.0% | |
| CCACCTAGGGACCCACCGCA+TGG | + | chr4.3:36963438-36963457 | None:intergenic | 70.0% | |
| CCATGCGGTGGGTCCCTAGG+TGG | - | chr4.3:36963435-36963454 | MS.gene46881:intron | 70.0% | |
| CGTTAGCTGGTGCGCCACCG+GGG | + | chr4.3:36963043-36963062 | None:intergenic | 70.0% | |
| GACGATGAGACCGGAGCCGG+TGG | + | chr4.3:36962940-36962959 | None:intergenic | 70.0% | |
| GATGAGACCGGAGCCGGTGG+CGG | + | chr4.3:36962937-36962956 | None:intergenic | 70.0% | |
| GTTAGCTGGTGCGCCACCGG+GGG | + | chr4.3:36963042-36963061 | None:intergenic | 70.0% | |
| !! | GGGGAGGAGGGAAGCGTTGG+AGG | + | chr4.3:36962916-36962935 | None:intergenic | 70.0% |
| GCTTCCCTCCTCCCCGCCAC+CGG | - | chr4.3:36962921-36962940 | MS.gene46881:CDS | 75.0% | |
| GTGCGCCACCGGGGGCTTTG+AGG | + | chr4.3:36963034-36963053 | None:intergenic | 75.0% | |
| TGAGACCGGAGCCGGTGGCG+GGG | + | chr4.3:36962935-36962954 | None:intergenic | 75.0% | |
| ! | GGCGGGGAGGAGGGAAGCGT+TGG | + | chr4.3:36962919-36962938 | None:intergenic | 75.0% |
| !!! | CTCCTCCCCGCCACCGGCTC+CGG | - | chr4.3:36962927-36962946 | MS.gene46881:CDS | 80.0% |
| !!! | GGAGCCGGTGGCGGGGAGGA+GGG | + | chr4.3:36962928-36962947 | None:intergenic | 80.0% |
| !!! | CGGAGCCGGTGGCGGGGAGG+AGG | + | chr4.3:36962929-36962948 | None:intergenic | 85.0% |
| !!! | GACCGGAGCCGGTGGCGGGG+AGG | + | chr4.3:36962932-36962951 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 36962909 | 36966086 | 36962909 | ID=MS.gene46881 |
| chr4.3 | mRNA | 36962909 | 36966086 | 36962909 | ID=MS.gene46881.t1;Parent=MS.gene46881 |
| chr4.3 | exon | 36965670 | 36966086 | 36965670 | ID=MS.gene46881.t1.exon1;Parent=MS.gene46881.t1 |
| chr4.3 | CDS | 36965670 | 36966086 | 36965670 | ID=cds.MS.gene46881.t1;Parent=MS.gene46881.t1 |
| chr4.3 | exon | 36964049 | 36964381 | 36964049 | ID=MS.gene46881.t1.exon2;Parent=MS.gene46881.t1 |
| chr4.3 | CDS | 36964049 | 36964381 | 36964049 | ID=cds.MS.gene46881.t1;Parent=MS.gene46881.t1 |
| chr4.3 | exon | 36963162 | 36963278 | 36963162 | ID=MS.gene46881.t1.exon3;Parent=MS.gene46881.t1 |
| chr4.3 | CDS | 36963162 | 36963278 | 36963162 | ID=cds.MS.gene46881.t1;Parent=MS.gene46881.t1 |
| chr4.3 | exon | 36962909 | 36963037 | 36962909 | ID=MS.gene46881.t1.exon4;Parent=MS.gene46881.t1 |
| chr4.3 | CDS | 36962909 | 36963037 | 36962909 | ID=cds.MS.gene46881.t1;Parent=MS.gene46881.t1 |
| Gene Sequence |
| Protein sequence |
