Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28335.t1 | XP_013456308.1 | 99.1 | 331 | 3 | 0 | 1 | 331 | 1 | 331 | 1.70E-181 | 645.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28335.t1 | Q42896 | 86.2 | 320 | 44 | 0 | 10 | 329 | 6 | 325 | 7.8e-156 | 551.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28335.t1 | A0A072UKS2 | 99.1 | 331 | 3 | 0 | 1 | 331 | 1 | 331 | 1.2e-181 | 645.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050809 | MS.gene28335 | 0.815019 | 1.15E-51 | -1.69E-46 |
| MS.gene052870 | MS.gene28335 | -0.809092 | 2.24E-50 | -1.69E-46 |
| MS.gene059711 | MS.gene28335 | -0.809961 | 1.46E-50 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28335.t1 | MTR_4g067310 | 99.094 | 331 | 3 | 0 | 1 | 331 | 1 | 331 | 0.0 | 663 |
| MS.gene28335.t1 | MTR_2g098950 | 90.062 | 322 | 32 | 0 | 8 | 329 | 7 | 328 | 0.0 | 595 |
| MS.gene28335.t1 | MTR_1g076850 | 67.516 | 314 | 102 | 0 | 15 | 328 | 8 | 321 | 1.71e-157 | 444 |
| MS.gene28335.t1 | MTR_1g101950 | 65.312 | 320 | 109 | 1 | 13 | 330 | 21 | 340 | 1.82e-149 | 424 |
| MS.gene28335.t1 | MTR_5g079460 | 67.085 | 319 | 104 | 1 | 13 | 330 | 65 | 383 | 1.46e-148 | 423 |
| MS.gene28335.t1 | MTR_6g089480 | 62.821 | 312 | 114 | 1 | 22 | 331 | 1 | 312 | 9.30e-144 | 408 |
| MS.gene28335.t1 | MTR_6g089480 | 64.074 | 270 | 95 | 1 | 22 | 289 | 1 | 270 | 1.43e-125 | 361 |
| MS.gene28335.t1 | MTR_6g089480 | 63.603 | 272 | 97 | 1 | 22 | 291 | 1 | 272 | 1.72e-125 | 361 |
| MS.gene28335.t1 | MTR_7g075860 | 57.233 | 318 | 132 | 3 | 15 | 328 | 41 | 358 | 3.75e-124 | 360 |
| MS.gene28335.t1 | MTR_1g069745 | 52.381 | 294 | 126 | 4 | 36 | 327 | 4 | 285 | 5.12e-100 | 296 |
| MS.gene28335.t1 | MTR_1g057810 | 50.633 | 316 | 146 | 4 | 14 | 326 | 252 | 560 | 4.48e-99 | 303 |
| MS.gene28335.t1 | MTR_1g069490 | 50.000 | 320 | 132 | 4 | 13 | 330 | 108 | 401 | 4.53e-97 | 293 |
| MS.gene28335.t1 | MTR_1g105150 | 47.468 | 316 | 142 | 5 | 14 | 326 | 252 | 546 | 7.23e-87 | 271 |
| MS.gene28335.t1 | MTR_1g054730 | 45.956 | 272 | 118 | 2 | 55 | 326 | 144 | 386 | 1.50e-69 | 222 |
| MS.gene28335.t1 | MTR_4g019165 | 31.608 | 367 | 204 | 4 | 8 | 327 | 86 | 452 | 7.94e-51 | 175 |
| MS.gene28335.t1 | MTR_5g044990 | 33.007 | 306 | 180 | 5 | 41 | 324 | 250 | 552 | 3.73e-50 | 176 |
| MS.gene28335.t1 | MTR_0046s0180 | 55.446 | 101 | 45 | 0 | 226 | 326 | 8 | 108 | 7.42e-33 | 118 |
| MS.gene28335.t1 | MTR_2g072830 | 28.231 | 294 | 175 | 10 | 46 | 328 | 89 | 357 | 2.21e-17 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28335.t1 | AT1G06030 | 84.494 | 316 | 49 | 0 | 14 | 329 | 10 | 325 | 0.0 | 561 |
| MS.gene28335.t1 | AT2G31390 | 83.333 | 330 | 49 | 1 | 1 | 330 | 1 | 324 | 0.0 | 561 |
| MS.gene28335.t1 | AT3G59480 | 85.397 | 315 | 46 | 0 | 15 | 329 | 10 | 324 | 0.0 | 558 |
| MS.gene28335.t1 | AT1G06020 | 83.228 | 316 | 53 | 0 | 14 | 329 | 9 | 324 | 0.0 | 550 |
| MS.gene28335.t1 | AT4G10260 | 69.524 | 315 | 96 | 0 | 15 | 329 | 6 | 320 | 1.94e-158 | 446 |
| MS.gene28335.t1 | AT1G66430 | 65.312 | 320 | 110 | 1 | 13 | 331 | 63 | 382 | 1.99e-153 | 436 |
| MS.gene28335.t1 | AT5G51830 | 65.823 | 316 | 106 | 1 | 15 | 328 | 23 | 338 | 1.07e-148 | 422 |
| MS.gene28335.t1 | AT5G51830 | 65.823 | 316 | 106 | 1 | 15 | 328 | 23 | 338 | 1.07e-148 | 422 |
| MS.gene28335.t1 | AT1G50390 | 64.912 | 171 | 31 | 1 | 160 | 330 | 1 | 142 | 1.56e-72 | 221 |
| MS.gene28335.t1 | AT3G54090 | 32.425 | 367 | 200 | 6 | 8 | 327 | 96 | 461 | 5.61e-52 | 178 |
| MS.gene28335.t1 | AT1G69200 | 30.556 | 288 | 178 | 3 | 41 | 307 | 246 | 532 | 1.14e-41 | 153 |
| MS.gene28335.t1 | AT1G17160 | 29.766 | 299 | 168 | 13 | 46 | 329 | 105 | 376 | 6.30e-19 | 87.0 |
| MS.gene28335.t1 | AT1G06730 | 26.510 | 298 | 194 | 8 | 47 | 329 | 132 | 419 | 1.96e-11 | 65.1 |
Find 96 sgRNAs with CRISPR-Local
Find 229 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAGAAGTAACTTCAAATT+AGG | 0.127503 | 4.4:+39188591 | None:intergenic |
| CAGGCAAAAGTCTTCCATTA+TGG | 0.241889 | 4.4:-39188867 | MS.gene28335:CDS |
| CTTGTAACTCTTGGTGAAAA+TGG | 0.245978 | 4.4:-39188573 | MS.gene28335:CDS |
| GTAAGCAAATTCTCAGTATA+TGG | 0.266378 | 4.4:-39188710 | MS.gene28335:CDS |
| CTAAGCACTCACTTCAAGTA+TGG | 0.282419 | 4.4:+39187692 | None:intergenic |
| AGCAATTACTACTACCAAAA+AGG | 0.287374 | 4.4:-39187512 | MS.gene28335:CDS |
| CGGAGCCGGTGGCGGGGAGG+AGG | 0.303525 | 4.4:+39190577 | None:intergenic |
| AGTTCAAGATTGAGATCTTC+AGG | 0.313198 | 4.4:+39190210 | None:intergenic |
| GGGGAGGAGGGAAGCGTTGG+AGG | 0.336425 | 4.4:+39190590 | None:intergenic |
| AACAGGATGAAGCAAGGTTA+AGG | 0.370203 | 4.4:-39187564 | MS.gene28335:intron |
| TCCTTCGTTGGAGCTCTGTT+GGG | 0.375710 | 4.4:-39187735 | MS.gene28335:CDS |
| TGTCCTTAGCCTGATCAAAA+AGG | 0.382490 | 4.4:-39187458 | MS.gene28335:CDS |
| CTCCTCCCCGCCACCGGCTC+CGG | 0.383160 | 4.4:-39190576 | MS.gene28335:CDS |
| CAAGAAGTAACTTCAAATTA+GGG | 0.389192 | 4.4:+39188592 | None:intergenic |
| TTCCTTCGTTGGAGCTCTGT+TGG | 0.395933 | 4.4:-39187736 | MS.gene28335:CDS |
| TCAAACTTATCGATCCATAA+TGG | 0.398109 | 4.4:+39188853 | None:intergenic |
| CAAACCTCCGGCTACCTTTG+TGG | 0.410022 | 4.4:-39188752 | MS.gene28335:CDS |
| TATACTGAGAATTTGCTTAC+GGG | 0.413418 | 4.4:+39188713 | None:intergenic |
| CACAAAGGTAGCCGGAGGTT+TGG | 0.427528 | 4.4:+39188753 | None:intergenic |
| GTCTCCCTTGCTGAAGCTCC+CGG | 0.431068 | 4.4:-39190498 | MS.gene28335:CDS |
| GGGAGACACCAGAGGTTGTT+GGG | 0.432776 | 4.4:+39190514 | None:intergenic |
| TCAGCTTCTGTTGGAAGAGC+TGG | 0.436019 | 4.4:+39187481 | None:intergenic |
| AAGTTACTTCTTGTAACTCT+TGG | 0.438912 | 4.4:-39188582 | MS.gene28335:CDS |
| ATATACTGAGAATTTGCTTA+CGG | 0.441354 | 4.4:+39188712 | None:intergenic |
| GACTTCGTCCCAACAACCTC+TGG | 0.441931 | 4.4:-39190522 | MS.gene28335:CDS |
| GACGTTAGCTGGTGCACCAC+CGG | 0.450576 | 4.4:+39190461 | None:intergenic |
| ACAGGATGAAGCAAGGTTAA+GGG | 0.455931 | 4.4:-39187563 | MS.gene28335:intron |
| GTGGAGCTGGAATTTCTAAC+TGG | 0.457777 | 4.4:-39188657 | MS.gene28335:CDS |
| ACAGCGATCGCGACGTTAGC+TGG | 0.464087 | 4.4:+39190450 | None:intergenic |
| ATGAGACCGGAGCCGGTGGC+GGG | 0.469238 | 4.4:+39190570 | None:intergenic |
| TCCGGTCTCATCGTCAGCTT+CGG | 0.470421 | 4.4:-39190558 | MS.gene28335:CDS |
| ATTTGCTTACGGGCTTCCTC+TGG | 0.470871 | 4.4:+39188723 | None:intergenic |
| GGTGCTGGTGATTCCTTCGT+TGG | 0.473983 | 4.4:-39187747 | MS.gene28335:CDS |
| AATTCGGTCACATGCTCGCC+GGG | 0.475756 | 4.4:-39190377 | MS.gene28335:CDS |
| TAAGCAAATTCTCAGTATAT+GGG | 0.478304 | 4.4:-39188709 | MS.gene28335:CDS |
| GTCAACACTGTTGATACAAC+TGG | 0.481252 | 4.4:-39187768 | MS.gene28335:CDS |
| CAAGGTCAGTGATGTGGAGC+TGG | 0.482074 | 4.4:-39188670 | MS.gene28335:CDS |
| GGCGGGGAGGAGGGAAGCGT+TGG | 0.487671 | 4.4:+39190587 | None:intergenic |
| TCTGCCTTCGTCGGAAAACT+CGG | 0.489892 | 4.4:-39190408 | MS.gene28335:CDS |
| AGGGAAGCGTTGGAGGCCAT+TGG | 0.492348 | 4.4:+39190597 | None:intergenic |
| TGGACAAATCAGAATTTCAA+AGG | 0.493890 | 4.4:-39187810 | MS.gene28335:intron |
| AGGGAGACACCAGAGGTTGT+TGG | 0.499418 | 4.4:+39190513 | None:intergenic |
| GGAGCCGGTGGCGGGGAGGA+GGG | 0.504246 | 4.4:+39190578 | None:intergenic |
| CTTAAATTTGCCAATGCATG+TGG | 0.505670 | 4.4:-39187535 | MS.gene28335:CDS |
| ACGTTAGCTGGTGCACCACC+GGG | 0.506368 | 4.4:+39190462 | None:intergenic |
| CTAAGGACATCAGCTTCTGT+TGG | 0.510882 | 4.4:+39187472 | None:intergenic |
| GCTTCCCTCCTCCCCGCCAC+CGG | 0.518084 | 4.4:-39190582 | MS.gene28335:CDS |
| AAACTCGGTGATGATGAATT+CGG | 0.518336 | 4.4:-39190393 | MS.gene28335:CDS |
| ACTTCAAATTAGGGTGCCAC+AGG | 0.521764 | 4.4:+39188601 | None:intergenic |
| TGGATCGATAAGTTTGATTG+TGG | 0.524813 | 4.4:-39188847 | MS.gene28335:CDS |
| GAAAACAACGTGAGAGGTGA+TGG | 0.526062 | 4.4:-39190345 | MS.gene28335:CDS |
| CCCGGTTTCCTCAAAGCCCC+CGG | 0.527234 | 4.4:-39190480 | MS.gene28335:CDS |
| ATGGAAGTTGCTAAGGAGGC+AGG | 0.531001 | 4.4:-39188795 | MS.gene28335:CDS |
| TGAGACCGGAGCCGGTGGCG+GGG | 0.532555 | 4.4:+39190571 | None:intergenic |
| GAATTCGGTCACATGCTCGC+CGG | 0.537803 | 4.4:-39190378 | MS.gene28335:CDS |
| TTACGGGCTTCCTCTGGTGA+AGG | 0.541696 | 4.4:+39188729 | None:intergenic |
| ACTGTTGATACAACTGGTGC+TGG | 0.543600 | 4.4:-39187762 | MS.gene28335:CDS |
| AGTAATTGCTCCACATGCAT+TGG | 0.546129 | 4.4:+39187525 | None:intergenic |
| CAAAGGCGCTCGTACTGCAC+TGG | 0.546743 | 4.4:-39190310 | MS.gene28335:CDS |
| GAAGGCAATGGAAGTTGCTA+AGG | 0.548461 | 4.4:-39188802 | MS.gene28335:CDS |
| GCCGAAGCTGACGATGAGAC+CGG | 0.549381 | 4.4:+39190557 | None:intergenic |
| GATGAGACCGGAGCCGGTGG+CGG | 0.549666 | 4.4:+39190569 | None:intergenic |
| GTGAAGGCCACAAAGGTAGC+CGG | 0.553387 | 4.4:+39188745 | None:intergenic |
| TTCAGATGTGCTGATCTGCA+TGG | 0.553886 | 4.4:+39188822 | None:intergenic |
| TTAAATAACAGGATGAAGCA+AGG | 0.555208 | 4.4:-39187570 | MS.gene28335:intron |
| ACCTTTGTGGCCTTCACCAG+AGG | 0.557240 | 4.4:-39188739 | MS.gene28335:CDS |
| GCGATCGCTGTTTCACGACT+CGG | 0.559904 | 4.4:-39190438 | MS.gene28335:CDS |
| GGCAATGGAAGTTGCTAAGG+AGG | 0.567696 | 4.4:-39188799 | MS.gene28335:CDS |
| TCTCTTATGATCCAAACCTC+CGG | 0.571114 | 4.4:-39188764 | MS.gene28335:CDS |
| ATGCAGATCAGCACATCTGA+AGG | 0.574430 | 4.4:-39188820 | MS.gene28335:CDS |
| GCTGACGATGAGACCGGAGC+CGG | 0.576648 | 4.4:+39190563 | None:intergenic |
| GATGGTATCAACTTTGACAA+AGG | 0.579902 | 4.4:-39190327 | MS.gene28335:CDS |
| TTGTATCAACAGTGTTGACA+TGG | 0.579990 | 4.4:+39187772 | None:intergenic |
| GACCGGAGCCGGTGGCGGGG+AGG | 0.584412 | 4.4:+39190574 | None:intergenic |
| TCCTCTGGTGAAGGCCACAA+AGG | 0.588528 | 4.4:+39188738 | None:intergenic |
| GACGATGAGACCGGAGCCGG+TGG | 0.591172 | 4.4:+39190566 | None:intergenic |
| ATCAGCACATCTGAAGGCAA+TGG | 0.591539 | 4.4:-39188814 | MS.gene28335:CDS |
| GCCCAACAGAGCTCCAACGA+AGG | 0.601582 | 4.4:+39187734 | None:intergenic |
| TTGAAAGAAAACAACGTGAG+AGG | 0.604412 | 4.4:-39190351 | MS.gene28335:CDS |
| TCTCATCAAGGTCAGTGATG+TGG | 0.606659 | 4.4:-39188676 | MS.gene28335:CDS |
| CATGAACTCACGCTCTCCAT+CGG | 0.608461 | 4.4:+39190269 | None:intergenic |
| TTTGTTACTCTACGCGCCGA+TGG | 0.610292 | 4.4:-39190285 | MS.gene28335:CDS |
| GGCGGTAAATCTGCCTTCGT+CGG | 0.612156 | 4.4:-39190417 | MS.gene28335:CDS |
| TTCAGCAAGGGAGACACCAG+AGG | 0.627638 | 4.4:+39190506 | None:intergenic |
| GGACAAGGCTGATCTCATCA+AGG | 0.638589 | 4.4:-39188688 | MS.gene28335:CDS |
| GGAAACCGGGAGCTTCAGCA+AGG | 0.638648 | 4.4:+39190493 | None:intergenic |
| ATGCTTCTGCTCTCTCCCTG+TGG | 0.639152 | 4.4:-39188617 | MS.gene28335:CDS |
| GAAACCGGGAGCTTCAGCAA+GGG | 0.654816 | 4.4:+39190494 | None:intergenic |
| GTTAGCTGGTGCACCACCGG+GGG | 0.660853 | 4.4:+39190464 | None:intergenic |
| GTAAGAAGCATATCAGCACT+CGG | 0.662701 | 4.4:+39190234 | None:intergenic |
| AATTCTCAGTATATGGGACA+AGG | 0.663851 | 4.4:-39188703 | MS.gene28335:CDS |
| ATCGCTGTTTCACGACTCGG+CGG | 0.669298 | 4.4:-39190435 | MS.gene28335:CDS |
| CGTTAGCTGGTGCACCACCG+GGG | 0.671336 | 4.4:+39190463 | None:intergenic |
| CTTCAAATTAGGGTGCCACA+GGG | 0.672272 | 4.4:+39188602 | None:intergenic |
| AAGGCCACAAAGGTAGCCGG+AGG | 0.689884 | 4.4:+39188748 | None:intergenic |
| TGGTTCCAGATATTATACAA+AGG | 0.703810 | 4.4:-39188553 | MS.gene28335:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATATTTTACGTTATATAT+TGG | + | chr4.4:39188044-39188063 | None:intergenic | 10.0% |
| !! | AATAAGTAAAATTGAAGATT+AGG | + | chr4.4:39189527-39189546 | None:intergenic | 15.0% |
| !! | AGAATAAAAAAAAAAAGGTT+AGG | + | chr4.4:39188812-39188831 | None:intergenic | 15.0% |
| !! | ATATACTATTATGACTTAAT+TGG | - | chr4.4:39188519-39188538 | MS.gene28335:intron | 15.0% |
| !!! | AGTTGATTTTATTAGTTTTA+GGG | - | chr4.4:39188571-39188590 | MS.gene28335:CDS | 15.0% |
| !!! | TAGTTGATTTTATTAGTTTT+AGG | - | chr4.4:39188570-39188589 | MS.gene28335:CDS | 15.0% |
| !!! | TATTTTTCGTTTTAAATAAC+AGG | - | chr4.4:39190466-39190485 | MS.gene28335:CDS | 15.0% |
| !!! | TTAATTTCTTTGTTTTTCAA+AGG | + | chr4.4:39188695-39188714 | None:intergenic | 15.0% |
| !! | TATCCATACTTGTATTATAT+TGG | - | chr4.4:39190395-39190414 | MS.gene28335:CDS | 20.0% |
| !! | TTTATTTATACGATCAGAAA+AGG | - | chr4.4:39188097-39188116 | MS.gene28335:intron | 20.0% |
| !!! | ATTATGAAACATGATTTTTC+AGG | - | chr4.4:39189161-39189180 | MS.gene28335:intron | 20.0% |
| !!! | TCATAATTCAATTACTCTTT+TGG | + | chr4.4:39189148-39189167 | None:intergenic | 20.0% |
| !!! | TTTTACCTTTGTATAATATC+TGG | + | chr4.4:39189502-39189521 | None:intergenic | 20.0% |
| !!! | TTTTTGATCTGATTTTTTTG+TGG | - | chr4.4:39187914-39187933 | MS.gene28335:intron | 20.0% |
| ! | AACTATAGTGAATCAAAAAC+AGG | + | chr4.4:39188420-39188439 | None:intergenic | 25.0% |
| ! | ACAAGAAGTAACTTCAAATT+AGG | + | chr4.4:39189459-39189478 | None:intergenic | 25.0% |
| ! | ACACCAATATAATACAAGTA+TGG | + | chr4.4:39190401-39190420 | None:intergenic | 25.0% |
| ! | ATCAGAAAAGGTGATATATA+TGG | - | chr4.4:39188109-39188128 | MS.gene28335:intron | 25.0% |
| ! | CAAGAAGTAACTTCAAATTA+GGG | + | chr4.4:39189458-39189477 | None:intergenic | 25.0% |
| ! | GGTTCAAATTCAATTGAAAA+AGG | - | chr4.4:39189826-39189845 | MS.gene28335:intron | 25.0% |
| ! | TAAGCAAATTCTCAGTATAT+GGG | - | chr4.4:39189338-39189357 | MS.gene28335:intron | 25.0% |
| ! | TCAGAAAAGGTGATATATAT+GGG | - | chr4.4:39188110-39188129 | MS.gene28335:intron | 25.0% |
| ! | TCCATTCAATAACTTAACTA+GGG | - | chr4.4:39189941-39189960 | MS.gene28335:intron | 25.0% |
| ! | TCTAACGAATCAAAATACAA+AGG | + | chr4.4:39188379-39188398 | None:intergenic | 25.0% |
| ! | TTAAGAATTCGAATACCAAA+CGG | - | chr4.4:39188950-39188969 | MS.gene28335:intron | 25.0% |
| ! | TTCCATTCAATAACTTAACT+AGG | - | chr4.4:39189940-39189959 | MS.gene28335:intron | 25.0% |
| ! | TTGTTTACAGTTGAAAAGTA+AGG | + | chr4.4:39189890-39189909 | None:intergenic | 25.0% |
| !! | AACATGCAATATTGTTATTG+AGG | + | chr4.4:39190155-39190174 | None:intergenic | 25.0% |
| !! | AATCAAAATCTGCATTGTTT+TGG | - | chr4.4:39189049-39189068 | MS.gene28335:intron | 25.0% |
| !! | AGTTTATAGAGTGTTAATTG+TGG | + | chr4.4:39188670-39188689 | None:intergenic | 25.0% |
| !! | ATATACTGAGAATTTGCTTA+CGG | + | chr4.4:39189338-39189357 | None:intergenic | 25.0% |
| !! | GGTAAATGTGTGTATAATTT+TGG | - | chr4.4:39188540-39188559 | MS.gene28335:intron | 25.0% |
| !!! | GTTTTAGAAAGTATGTTAAG+TGG | - | chr4.4:39190172-39190191 | MS.gene28335:intron | 25.0% |
| !!! | TTTTCTAAAATATATGCACG+TGG | + | chr4.4:39188728-39188747 | None:intergenic | 25.0% |
| AAGTTACTTCTTGTAACTCT+TGG | - | chr4.4:39189465-39189484 | MS.gene28335:intron | 30.0% | |
| AGAAAAGGTGATATATATGG+GGG | - | chr4.4:39188112-39188131 | MS.gene28335:intron | 30.0% | |
| AGCAATTACTACTACCAAAA+AGG | - | chr4.4:39190535-39190554 | MS.gene28335:CDS | 30.0% | |
| ATGTGTGCAAGTAGTAAAAT+TGG | - | chr4.4:39188893-39188912 | MS.gene28335:intron | 30.0% | |
| CAGAAAAGGTGATATATATG+GGG | - | chr4.4:39188111-39188130 | MS.gene28335:intron | 30.0% | |
| CATTCAATAACTTAACTAGG+GGG | - | chr4.4:39189943-39189962 | MS.gene28335:intron | 30.0% | |
| CCATTCAATAACTTAACTAG+GGG | - | chr4.4:39189942-39189961 | MS.gene28335:intron | 30.0% | |
| GCAATTACTACTACCAAAAA+GGG | - | chr4.4:39190536-39190555 | MS.gene28335:CDS | 30.0% | |
| GGTAGAAAATTGATCAAGAT+TGG | + | chr4.4:39189080-39189099 | None:intergenic | 30.0% | |
| GTAAGCAAATTCTCAGTATA+TGG | - | chr4.4:39189337-39189356 | MS.gene28335:intron | 30.0% | |
| TATCACACTATGTTAGAAGT+GGG | + | chr4.4:39188233-39188252 | None:intergenic | 30.0% | |
| TATCCAAACAAGATCATCAT+TGG | + | chr4.4:39189631-39189650 | None:intergenic | 30.0% | |
| TCAAACTTATCGATCCATAA+TGG | + | chr4.4:39189197-39189216 | None:intergenic | 30.0% | |
| TGGACAAATCAGAATTTCAA+AGG | - | chr4.4:39190237-39190256 | MS.gene28335:CDS | 30.0% | |
| TGGTTCCAGATATTATACAA+AGG | - | chr4.4:39189494-39189513 | MS.gene28335:intron | 30.0% | |
| TTAAAAACCGAGCTTGAATT+TGG | + | chr4.4:39189018-39189037 | None:intergenic | 30.0% | |
| TTAAATAACAGGATGAAGCA+AGG | - | chr4.4:39190477-39190496 | MS.gene28335:CDS | 30.0% | |
| TTACAGTTGAAAAGTAAGGT+GGG | + | chr4.4:39189886-39189905 | None:intergenic | 30.0% | |
| TTATCGTGACGTTTATTGAT+TGG | - | chr4.4:39188308-39188327 | MS.gene28335:intron | 30.0% | |
| TTGAATTTGAACCTAACTAC+TGG | + | chr4.4:39189819-39189838 | None:intergenic | 30.0% | |
| TTGGATCATCTGATCTTAAT+TGG | + | chr4.4:39188999-39189018 | None:intergenic | 30.0% | |
| TTGTAAGTCTGTTTATGACA+TGG | + | chr4.4:39189787-39189806 | None:intergenic | 30.0% | |
| TTTACAGTTGAAAAGTAAGG+TGG | + | chr4.4:39189887-39189906 | None:intergenic | 30.0% | |
| TTTCCAATGATGATCTTGTT+TGG | - | chr4.4:39189625-39189644 | MS.gene28335:intron | 30.0% | |
| ! | AATTCTGATTTGTCCAGAAA+AGG | + | chr4.4:39190233-39190252 | None:intergenic | 30.0% |
| ! | TATACTGAGAATTTGCTTAC+GGG | + | chr4.4:39189337-39189356 | None:intergenic | 30.0% |
| ! | TCTTTTGGCATGAAAAAAAC+TGG | + | chr4.4:39189133-39189152 | None:intergenic | 30.0% |
| ! | TGACAATTTTTCTCCTTTTC+TGG | - | chr4.4:39190217-39190236 | MS.gene28335:CDS | 30.0% |
| AAATGCTTATGCCAGTAGTT+AGG | - | chr4.4:39189805-39189824 | MS.gene28335:intron | 35.0% | |
| AATATATGCACGTGGTTTCT+AGG | + | chr4.4:39188720-39188739 | None:intergenic | 35.0% | |
| AATTCTCAGTATATGGGACA+AGG | - | chr4.4:39189344-39189363 | MS.gene28335:intron | 35.0% | |
| ACTACAATCTAAATGCAGAG+AGG | + | chr4.4:39190107-39190126 | None:intergenic | 35.0% | |
| AGATGATCCAAATTCAAGCT+CGG | - | chr4.4:39189008-39189027 | MS.gene28335:intron | 35.0% | |
| AGTACTACAATACCCTATGT+AGG | + | chr4.4:39189597-39189616 | None:intergenic | 35.0% | |
| AGTTCAAGATTGAGATCTTC+AGG | + | chr4.4:39187840-39187859 | None:intergenic | 35.0% | |
| CCCCTAGTTAAGTTATTGAA+TGG | + | chr4.4:39189945-39189964 | None:intergenic | 35.0% | |
| CTACAATCTAAATGCAGAGA+GGG | + | chr4.4:39190106-39190125 | None:intergenic | 35.0% | |
| CTTAAATTTGCCAATGCATG+TGG | - | chr4.4:39190512-39190531 | MS.gene28335:CDS | 35.0% | |
| CTTGTAACTCTTGGTGAAAA+TGG | - | chr4.4:39189474-39189493 | MS.gene28335:intron | 35.0% | |
| GAAAAGGTGATATATATGGG+GGG | - | chr4.4:39188113-39188132 | MS.gene28335:intron | 35.0% | |
| GATGGTATCAACTTTGACAA+AGG | - | chr4.4:39187720-39187739 | MS.gene28335:CDS | 35.0% | |
| GTATCACACTATGTTAGAAG+TGG | + | chr4.4:39188234-39188253 | None:intergenic | 35.0% | |
| TAACATAGTGTGATACACTG+TGG | - | chr4.4:39188238-39188257 | MS.gene28335:intron | 35.0% | |
| TGGATCGATAAGTTTGATTG+TGG | - | chr4.4:39189200-39189219 | MS.gene28335:intron | 35.0% | |
| TTATGGTTAATCCCACACAT+TGG | - | chr4.4:39188833-39188852 | MS.gene28335:CDS | 35.0% | |
| TTGAAAGAAAACAACGTGAG+AGG | - | chr4.4:39187696-39187715 | MS.gene28335:intron | 35.0% | |
| TTTCACTCTTAGCCTACATA+GGG | - | chr4.4:39189582-39189601 | MS.gene28335:intron | 35.0% | |
| ! | AAACTCGGTGATGATGAATT+CGG | - | chr4.4:39187654-39187673 | MS.gene28335:intron | 35.0% |
| ! | GCAAGTAGTAAAATTGGTCT+AGG | - | chr4.4:39188899-39188918 | MS.gene28335:intron | 35.0% |
| ! | TAAAATTGGTCTAGGTCACT+AGG | - | chr4.4:39188907-39188926 | MS.gene28335:intron | 35.0% |
| !! | CATAGGGTATTGTAGTACTT+TGG | - | chr4.4:39189598-39189617 | MS.gene28335:intron | 35.0% |
| !! | GTTGTTTTCTTTCAAGATCC+CGG | + | chr4.4:39187691-39187710 | None:intergenic | 35.0% |
| !! | TTGTATCAACAGTGTTGACA+TGG | + | chr4.4:39190278-39190297 | None:intergenic | 35.0% |
| !!! | TACGCTTTTTTTGGTGAAGT+AGG | - | chr4.4:39188193-39188212 | MS.gene28335:intron | 35.0% |
| AAACCGCGCATGATATAGTA+GGG | + | chr4.4:39188764-39188783 | None:intergenic | 40.0% | |
| AACAGGATGAAGCAAGGTTA+AGG | - | chr4.4:39190483-39190502 | MS.gene28335:CDS | 40.0% | |
| AATAACTTAACTAGGGGGAG+GGG | - | chr4.4:39189948-39189967 | MS.gene28335:intron | 40.0% | |
| ACAGGATGAAGCAAGGTTAA+GGG | - | chr4.4:39190484-39190503 | MS.gene28335:CDS | 40.0% | |
| AGTAATTGCTCCACATGCAT+TGG | + | chr4.4:39190525-39190544 | None:intergenic | 40.0% | |
| ATACATTCACACCTGTGCTA+TGG | - | chr4.4:39190024-39190043 | MS.gene28335:intron | 40.0% | |
| CAATAACTTAACTAGGGGGA+GGG | - | chr4.4:39189947-39189966 | MS.gene28335:intron | 40.0% | |
| CAGGCAAAAGTCTTCCATTA+TGG | - | chr4.4:39189180-39189199 | MS.gene28335:intron | 40.0% | |
| CCAGCAAGCAATAGAGAAAA+AGG | + | chr4.4:39189550-39189569 | None:intergenic | 40.0% | |
| CTAAGCACTCACTTCAAGTA+TGG | + | chr4.4:39190358-39190377 | None:intergenic | 40.0% | |
| CTTGCACACATTTGATGTGT+CGG | + | chr4.4:39188884-39188903 | None:intergenic | 40.0% | |
| CTTTCACTCTTAGCCTACAT+AGG | - | chr4.4:39189581-39189600 | MS.gene28335:intron | 40.0% | |
| GAATTCGAATACCAAACGGT+TGG | - | chr4.4:39188954-39188973 | MS.gene28335:intron | 40.0% | |
| GATGAGAGAGTGATGGTTTA+AGG | - | chr4.4:39188601-39188620 | MS.gene28335:CDS | 40.0% | |
| GCATTATCGCATGCAAATGA+AGG | - | chr4.4:39188643-39188662 | MS.gene28335:CDS | 40.0% | |
| GTCAACACTGTTGATACAAC+TGG | - | chr4.4:39190279-39190298 | MS.gene28335:CDS | 40.0% | |
| TAAACCGCGCATGATATAGT+AGG | + | chr4.4:39188765-39188784 | None:intergenic | 40.0% | |
| TCAATAACTTAACTAGGGGG+AGG | - | chr4.4:39189946-39189965 | MS.gene28335:intron | 40.0% | |
| TCAATTCGATGAGAGAGTGA+TGG | - | chr4.4:39188594-39188613 | MS.gene28335:CDS | 40.0% | |
| TCTCTTATGATCCAAACCTC+CGG | - | chr4.4:39189283-39189302 | MS.gene28335:intron | 40.0% | |
| TGTCCTTAGCCTGATCAAAA+AGG | - | chr4.4:39190589-39190608 | MS.gene28335:CDS | 40.0% | |
| TTGCACACATTTGATGTGTC+GGG | + | chr4.4:39188883-39188902 | None:intergenic | 40.0% | |
| ! | AGTCAGATTTTCCATGTGGT+GGG | - | chr4.4:39187996-39188015 | MS.gene28335:intron | 40.0% |
| ! | ATGCCTTTTTGATCAGGCTA+AGG | + | chr4.4:39190595-39190614 | None:intergenic | 40.0% |
| ! | CCTTTTTCTCTATTGCTTGC+TGG | - | chr4.4:39189547-39189566 | MS.gene28335:intron | 40.0% |
| ! | CTTAATTGGATCAAAAGCGC+TGG | + | chr4.4:39188985-39189004 | None:intergenic | 40.0% |
| ! | GAGGGGCTTACTATATTTTG+TGG | - | chr4.4:39189965-39189984 | MS.gene28335:intron | 40.0% |
| ! | GTAAGAAGCATATCAGCACT+CGG | + | chr4.4:39187816-39187835 | None:intergenic | 40.0% |
| ! | GTACTGTTGTGTTGCTATCA+TGG | - | chr4.4:39188338-39188357 | MS.gene28335:intron | 40.0% |
| ! | GTGACGTTTATTGATTGGAG+TGG | - | chr4.4:39188313-39188332 | MS.gene28335:intron | 40.0% |
| !! | TTTTTGGTGAAGTAGGCAAG+TGG | - | chr4.4:39188200-39188219 | MS.gene28335:intron | 40.0% |
| !!! | TGGCTAGCTTACGCTTTTTT+TGG | - | chr4.4:39188184-39188203 | MS.gene28335:intron | 40.0% |
| ACTGTTGATACAACTGGTGC+TGG | - | chr4.4:39190285-39190304 | MS.gene28335:CDS | 45.0% | |
| ATCAGCACATCTGAAGGCAA+TGG | - | chr4.4:39189233-39189252 | MS.gene28335:intron | 45.0% | |
| ATGCAGATCAGCACATCTGA+AGG | - | chr4.4:39189227-39189246 | MS.gene28335:intron | 45.0% | |
| CAATCTAAATGCAGAGAGGG+AGG | + | chr4.4:39190103-39190122 | None:intergenic | 45.0% | |
| CTAAGGACATCAGCTTCTGT+TGG | + | chr4.4:39190578-39190597 | None:intergenic | 45.0% | |
| GAAAACAACGTGAGAGGTGA+TGG | - | chr4.4:39187702-39187721 | MS.gene28335:intron | 45.0% | |
| GAAGGCAATGGAAGTTGCTA+AGG | - | chr4.4:39189245-39189264 | MS.gene28335:intron | 45.0% | |
| GGTCTATCTAGATCCACCTA+GGG | + | chr4.4:39188023-39188042 | None:intergenic | 45.0% | |
| GTGAAGTAGGCAAGTGGTTT+GGG | - | chr4.4:39188206-39188225 | MS.gene28335:intron | 45.0% | |
| GTGGAGCTGGAATTTCTAAC+TGG | - | chr4.4:39189390-39189409 | MS.gene28335:intron | 45.0% | |
| GTTTCACGCGCGTGTTTAAT+TGG | - | chr4.4:39187964-39187983 | MS.gene28335:intron | 45.0% | |
| TAGCCCTACTATATCATGCG+CGG | - | chr4.4:39188758-39188777 | MS.gene28335:CDS | 45.0% | |
| TCTCATCAAGGTCAGTGATG+TGG | - | chr4.4:39189371-39189390 | MS.gene28335:intron | 45.0% | |
| TGGTCTATCTAGATCCACCT+AGG | + | chr4.4:39188024-39188043 | None:intergenic | 45.0% | |
| TGGTTAATCCCACACATTGG+AGG | - | chr4.4:39188836-39188855 | MS.gene28335:CDS | 45.0% | |
| ! | AATTGGTCTAGGTCACTAGG+TGG | - | chr4.4:39188910-39188929 | MS.gene28335:intron | 45.0% |
| ! | ACTTCAAATTAGGGTGCCAC+AGG | + | chr4.4:39189449-39189468 | None:intergenic | 45.0% |
| ! | AGCTGGAATTGCTCCCTTTT+TGG | + | chr4.4:39190552-39190571 | None:intergenic | 45.0% |
| ! | ATTGGTCTAGGTCACTAGGT+GGG | - | chr4.4:39188911-39188930 | MS.gene28335:intron | 45.0% |
| ! | CTTCAAATTAGGGTGCCACA+GGG | + | chr4.4:39189448-39189467 | None:intergenic | 45.0% |
| ! | GAGTCAGATTTTCCATGTGG+TGG | - | chr4.4:39187995-39188014 | MS.gene28335:intron | 45.0% |
| ! | GCTGAGTCAGATTTTCCATG+TGG | - | chr4.4:39187992-39188011 | MS.gene28335:intron | 45.0% |
| ! | TCACGTGTTTTCCTTGCTCA+GGG | - | chr4.4:39188158-39188177 | MS.gene28335:intron | 45.0% |
| ! | TTCAGATGTGCTGATCTGCA+TGG | + | chr4.4:39189228-39189247 | None:intergenic | 45.0% |
| !! | TGGCTTTAGTGGACTTCTCA+TGG | - | chr4.4:39190044-39190063 | MS.gene28335:intron | 45.0% |
| !! | ATAAAAGAATAAAAAAAAAA+AGG | + | chr4.4:39188817-39188836 | None:intergenic | 5.0% |
| !! | TATATTTATTTATCTAAAAA+AGG | + | chr4.4:39188270-39188289 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTATTCTTTTA+TGG | - | chr4.4:39188816-39188835 | MS.gene28335:CDS | 5.0% |
| ATGGAAGTTGCTAAGGAGGC+AGG | - | chr4.4:39189252-39189271 | MS.gene28335:intron | 50.0% | |
| ATTTGCTTACGGGCTTCCTC+TGG | + | chr4.4:39189327-39189346 | None:intergenic | 50.0% | |
| CATGAACTCACGCTCTCCAT+CGG | + | chr4.4:39187781-39187800 | None:intergenic | 50.0% | |
| CCCACACATTGGAGGAATTG+CGG | - | chr4.4:39188844-39188863 | MS.gene28335:CDS | 50.0% | |
| CCGCAATTCCTCCAATGTGT+GGG | + | chr4.4:39188847-39188866 | None:intergenic | 50.0% | |
| CTCACACGCGCATACAAAAC+AGG | + | chr4.4:39189101-39189120 | None:intergenic | 50.0% | |
| GGACAAGGCTGATCTCATCA+AGG | - | chr4.4:39189359-39189378 | MS.gene28335:intron | 50.0% | |
| GGCAATGGAAGTTGCTAAGG+AGG | - | chr4.4:39189248-39189267 | MS.gene28335:intron | 50.0% | |
| GGTGAAGTAGGCAAGTGGTT+TGG | - | chr4.4:39188205-39188224 | MS.gene28335:intron | 50.0% | |
| GTCCACTAAAGCCATAGCAC+AGG | + | chr4.4:39190038-39190057 | None:intergenic | 50.0% | |
| TCAGCTTCTGTTGGAAGAGC+TGG | + | chr4.4:39190569-39190588 | None:intergenic | 50.0% | |
| TCCGCAATTCCTCCAATGTG+TGG | + | chr4.4:39188848-39188867 | None:intergenic | 50.0% | |
| TCCTTCGTTGGAGCTCTGTT+GGG | - | chr4.4:39190312-39190331 | MS.gene28335:CDS | 50.0% | |
| TCTGCCTTCGTCGGAAAACT+CGG | - | chr4.4:39187639-39187658 | MS.gene28335:intron | 50.0% | |
| TTCCTTCGTTGGAGCTCTGT+TGG | - | chr4.4:39190311-39190330 | MS.gene28335:CDS | 50.0% | |
| TTGTATGCGCGTGTGAGTGA+GGG | - | chr4.4:39189104-39189123 | MS.gene28335:intron | 50.0% | |
| TTTGTATGCGCGTGTGAGTG+AGG | - | chr4.4:39189103-39189122 | MS.gene28335:intron | 50.0% | |
| TTTGTTACTCTACGCGCCGA+TGG | - | chr4.4:39187762-39187781 | MS.gene28335:CDS | 50.0% | |
| ! | ATCACCGAGTTTTCCGACGA+AGG | + | chr4.4:39187646-39187665 | None:intergenic | 50.0% |
| ! | GTCACGTGTTTTCCTTGCTC+AGG | - | chr4.4:39188157-39188176 | MS.gene28335:intron | 50.0% |
| !! | CACCTGTGCTATGGCTTTAG+TGG | - | chr4.4:39190033-39190052 | MS.gene28335:intron | 50.0% |
| AATTCGGTCACATGCTCGCC+GGG | - | chr4.4:39187670-39187689 | MS.gene28335:intron | 55.0% | |
| ACCTTTGTGGCCTTCACCAG+AGG | - | chr4.4:39189308-39189327 | MS.gene28335:intron | 55.0% | |
| AGGGAGACACCAGAGGTTGT+TGG | + | chr4.4:39187537-39187556 | None:intergenic | 55.0% | |
| ATGCTTCTGCTCTCTCCCTG+TGG | - | chr4.4:39189430-39189449 | MS.gene28335:intron | 55.0% | |
| CAAACCTCCGGCTACCTTTG+TGG | - | chr4.4:39189295-39189314 | MS.gene28335:intron | 55.0% | |
| CAAGGTCAGTGATGTGGAGC+TGG | - | chr4.4:39189377-39189396 | MS.gene28335:intron | 55.0% | |
| CACAAAGGTAGCCGGAGGTT+TGG | + | chr4.4:39189297-39189316 | None:intergenic | 55.0% | |
| CGCTGGAATCACCAACCGTT+TGG | + | chr4.4:39188968-39188987 | None:intergenic | 55.0% | |
| CTAGGTCACTAGGTGGGTAG+TGG | - | chr4.4:39188917-39188936 | MS.gene28335:intron | 55.0% | |
| GAAACCGGGAGCTTCAGCAA+GGG | + | chr4.4:39187556-39187575 | None:intergenic | 55.0% | |
| GAATTCGGTCACATGCTCGC+CGG | - | chr4.4:39187669-39187688 | MS.gene28335:intron | 55.0% | |
| GACTTCGTCCCAACAACCTC+TGG | - | chr4.4:39187525-39187544 | MS.gene28335:CDS | 55.0% | |
| GGCGGTAAATCTGCCTTCGT+CGG | - | chr4.4:39187630-39187649 | MS.gene28335:intron | 55.0% | |
| GGGAGACACCAGAGGTTGTT+GGG | + | chr4.4:39187536-39187555 | None:intergenic | 55.0% | |
| GGGGTGTGTTTGTCACGTGA+GGG | - | chr4.4:39188132-39188151 | MS.gene28335:intron | 55.0% | |
| GTGAAGGCCACAAAGGTAGC+CGG | + | chr4.4:39189305-39189324 | None:intergenic | 55.0% | |
| TCCGGTCTCATCGTCAGCTT+CGG | - | chr4.4:39187489-39187508 | MS.gene28335:CDS | 55.0% | |
| TCCTCTGGTGAAGGCCACAA+AGG | + | chr4.4:39189312-39189331 | None:intergenic | 55.0% | |
| TTACGGGCTTCCTCTGGTGA+AGG | + | chr4.4:39189321-39189340 | None:intergenic | 55.0% | |
| TTCAGCAAGGGAGACACCAG+AGG | + | chr4.4:39187544-39187563 | None:intergenic | 55.0% | |
| ! | ATCGCTGTTTCACGACTCGG+CGG | - | chr4.4:39187612-39187631 | MS.gene28335:intron | 55.0% |
| ! | GCGATCGCTGTTTCACGACT+CGG | - | chr4.4:39187609-39187628 | MS.gene28335:intron | 55.0% |
| ! | GTTTTCCTTGCTCAGGGCTG+TGG | - | chr4.4:39188164-39188183 | MS.gene28335:intron | 55.0% |
| !! | GGTGCTGGTGATTCCTTCGT+TGG | - | chr4.4:39190300-39190319 | MS.gene28335:CDS | 55.0% |
| !! | TTTCCATGTGGTGGGTCCCT+AGG | - | chr4.4:39188004-39188023 | MS.gene28335:intron | 55.0% |
| AAGGCCACAAAGGTAGCCGG+AGG | + | chr4.4:39189302-39189321 | None:intergenic | 60.0% | |
| ACAGCGATCGCGACGTTAGC+TGG | + | chr4.4:39187600-39187619 | None:intergenic | 60.0% | |
| ACGTTAGCTGGTGCACCACC+GGG | + | chr4.4:39187588-39187607 | None:intergenic | 60.0% | |
| GACGTTAGCTGGTGCACCAC+CGG | + | chr4.4:39187589-39187608 | None:intergenic | 60.0% | |
| GCCCAACAGAGCTCCAACGA+AGG | + | chr4.4:39190316-39190335 | None:intergenic | 60.0% | |
| GCCGAAGCTGACGATGAGAC+CGG | + | chr4.4:39187493-39187512 | None:intergenic | 60.0% | |
| GGAAACCGGGAGCTTCAGCA+AGG | + | chr4.4:39187557-39187576 | None:intergenic | 60.0% | |
| GTCTCCCTTGCTGAAGCTCC+CGG | - | chr4.4:39187549-39187568 | MS.gene28335:CDS | 60.0% | |
| ! | CACTAGGTGGGTAGTGGTGG+TGG | - | chr4.4:39188923-39188942 | MS.gene28335:intron | 60.0% |
| ! | GGGGGTGTGTTTGTCACGTG+AGG | - | chr4.4:39188131-39188150 | MS.gene28335:intron | 60.0% |
| ! | GGTCACTAGGTGGGTAGTGG+TGG | - | chr4.4:39188920-39188939 | MS.gene28335:intron | 60.0% |
| !! | ACCGGGGGCTTTGAGGAAAC+CGG | + | chr4.4:39187571-39187590 | None:intergenic | 60.0% |
| !! | CAAAGGCGCTCGTACTGCAC+TGG | - | chr4.4:39187737-39187756 | MS.gene28335:CDS | 60.0% |
| !! | TAGGTGGGTAGTGGTGGTGG+TGG | - | chr4.4:39188926-39188945 | MS.gene28335:intron | 60.0% |
| CCACCTAGGGACCCACCACA+TGG | + | chr4.4:39188010-39188029 | None:intergenic | 65.0% | |
| CCCGGTTTCCTCAAAGCCCC+CGG | - | chr4.4:39187567-39187586 | MS.gene28335:intron | 65.0% | |
| CGTTAGCTGGTGCACCACCG+GGG | + | chr4.4:39187587-39187606 | None:intergenic | 65.0% | |
| GCTAGCCACAGCCCTGAGCA+AGG | + | chr4.4:39188172-39188191 | None:intergenic | 65.0% | |
| GCTGACGATGAGACCGGAGC+CGG | + | chr4.4:39187487-39187506 | None:intergenic | 65.0% | |
| GGTTTCCTCAAAGCCCCCGG+TGG | - | chr4.4:39187570-39187589 | MS.gene28335:intron | 65.0% | |
| GTTAGCTGGTGCACCACCGG+GGG | + | chr4.4:39187586-39187605 | None:intergenic | 65.0% | |
| !! | CCATGTGGTGGGTCCCTAGG+TGG | - | chr4.4:39188007-39188026 | MS.gene28335:intron | 65.0% |
| !! | CCGGGGGCTTTGAGGAAACC+GGG | + | chr4.4:39187570-39187589 | None:intergenic | 65.0% |
| ATGAGACCGGAGCCGGTGGC+GGG | + | chr4.4:39187480-39187499 | None:intergenic | 70.0% | |
| GACGATGAGACCGGAGCCGG+TGG | + | chr4.4:39187484-39187503 | None:intergenic | 70.0% | |
| GATGAGACCGGAGCCGGTGG+CGG | + | chr4.4:39187481-39187500 | None:intergenic | 70.0% | |
| GTGCACCACCGGGGGCTTTG+AGG | + | chr4.4:39187578-39187597 | None:intergenic | 70.0% | |
| !! | GGGGAGGAGGGAAGCGTTGG+AGG | + | chr4.4:39187460-39187479 | None:intergenic | 70.0% |
| GCTTCCCTCCTCCCCGCCAC+CGG | - | chr4.4:39187465-39187484 | MS.gene28335:CDS | 75.0% | |
| TGAGACCGGAGCCGGTGGCG+GGG | + | chr4.4:39187479-39187498 | None:intergenic | 75.0% | |
| ! | GGCGGGGAGGAGGGAAGCGT+TGG | + | chr4.4:39187463-39187482 | None:intergenic | 75.0% |
| !!! | CTCCTCCCCGCCACCGGCTC+CGG | - | chr4.4:39187471-39187490 | MS.gene28335:CDS | 80.0% |
| !!! | GGAGCCGGTGGCGGGGAGGA+GGG | + | chr4.4:39187472-39187491 | None:intergenic | 80.0% |
| !!! | CGGAGCCGGTGGCGGGGAGG+AGG | + | chr4.4:39187473-39187492 | None:intergenic | 85.0% |
| !!! | GACCGGAGCCGGTGGCGGGG+AGG | + | chr4.4:39187476-39187495 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 39187453 | 39190616 | 39187453 | ID=MS.gene28335 |
| chr4.4 | mRNA | 39187453 | 39190616 | 39187453 | ID=MS.gene28335.t1;Parent=MS.gene28335 |
| chr4.4 | exon | 39190200 | 39190616 | 39190200 | ID=MS.gene28335.t1.exon1;Parent=MS.gene28335.t1 |
| chr4.4 | CDS | 39190200 | 39190616 | 39190200 | ID=cds.MS.gene28335.t1;Parent=MS.gene28335.t1 |
| chr4.4 | exon | 39188554 | 39188886 | 39188554 | ID=MS.gene28335.t1.exon2;Parent=MS.gene28335.t1 |
| chr4.4 | CDS | 39188554 | 39188886 | 39188554 | ID=cds.MS.gene28335.t1;Parent=MS.gene28335.t1 |
| chr4.4 | exon | 39187704 | 39187820 | 39187704 | ID=MS.gene28335.t1.exon3;Parent=MS.gene28335.t1 |
| chr4.4 | CDS | 39187704 | 39187820 | 39187704 | ID=cds.MS.gene28335.t1;Parent=MS.gene28335.t1 |
| chr4.4 | exon | 39187453 | 39187581 | 39187453 | ID=MS.gene28335.t1.exon4;Parent=MS.gene28335.t1 |
| chr4.4 | CDS | 39187453 | 39187581 | 39187453 | ID=cds.MS.gene28335.t1;Parent=MS.gene28335.t1 |
| Gene Sequence |
| Protein sequence |
