Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000957.t1 | XP_013463353.1 | 95.4 | 789 | 36 | 0 | 1 | 789 | 1 | 789 | 0.00E+00 | 1443.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000957.t1 | Q9SA05 | 74.6 | 785 | 197 | 2 | 6 | 789 | 13 | 796 | 0.0e+00 | 1147.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000957.t1 | A0A072V6Z7 | 95.4 | 789 | 36 | 0 | 1 | 789 | 1 | 789 | 0.0e+00 | 1443.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene36506 | MS.gene000957 | PPI |
MS.gene036960 | MS.gene000957 | PPI |
MS.gene073487 | MS.gene000957 | PPI |
MS.gene028285 | MS.gene000957 | PPI |
MS.gene036961 | MS.gene000957 | PPI |
MS.gene57439 | MS.gene000957 | PPI |
MS.gene000957 | MS.gene36506 | PPI |
MS.gene036959 | MS.gene000957 | PPI |
MS.gene000958 | MS.gene000957 | PPI |
MS.gene57440 | MS.gene000957 | PPI |
MS.gene023187 | MS.gene000957 | PPI |
MS.gene35174 | MS.gene000957 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000957.t1 | MTR_2g438150 | 96.198 | 789 | 30 | 0 | 1 | 789 | 1 | 789 | 0.0 | 1557 |
MS.gene000957.t1 | MTR_2g438150 | 95.817 | 789 | 33 | 0 | 1 | 789 | 1 | 789 | 0.0 | 1527 |
MS.gene000957.t1 | MTR_4g094660 | 79.672 | 792 | 153 | 4 | 1 | 789 | 1 | 787 | 0.0 | 1261 |
MS.gene000957.t1 | MTR_2g438160 | 97.254 | 619 | 17 | 0 | 1 | 619 | 1 | 619 | 0.0 | 1231 |
MS.gene000957.t1 | MTR_4g094660 | 79.043 | 606 | 119 | 4 | 187 | 789 | 1 | 601 | 0.0 | 943 |
MS.gene000957.t1 | MTR_6g033165 | 48.642 | 773 | 352 | 7 | 50 | 789 | 59 | 819 | 0.0 | 744 |
MS.gene000957.t1 | MTR_5g034500 | 48.601 | 786 | 376 | 9 | 28 | 789 | 1 | 782 | 0.0 | 727 |
MS.gene000957.t1 | MTR_6g007697 | 48.020 | 783 | 379 | 10 | 28 | 789 | 1 | 776 | 0.0 | 726 |
MS.gene000957.t1 | MTR_5g071860 | 46.072 | 751 | 388 | 4 | 42 | 789 | 18 | 754 | 0.0 | 711 |
MS.gene000957.t1 | MTR_3g094090 | 46.183 | 799 | 388 | 9 | 28 | 789 | 1 | 794 | 0.0 | 707 |
MS.gene000957.t1 | MTR_8g063840 | 46.388 | 789 | 388 | 10 | 22 | 789 | 66 | 840 | 0.0 | 692 |
MS.gene000957.t1 | MTR_7g108480 | 44.488 | 771 | 387 | 7 | 22 | 787 | 37 | 771 | 0.0 | 689 |
MS.gene000957.t1 | MTR_2g008820 | 44.129 | 775 | 416 | 9 | 29 | 789 | 78 | 849 | 0.0 | 656 |
MS.gene000957.t1 | MTR_4g099260 | 43.593 | 796 | 425 | 10 | 11 | 789 | 27 | 815 | 0.0 | 654 |
MS.gene000957.t1 | MTR_5g071630 | 44.086 | 744 | 385 | 7 | 49 | 789 | 10 | 725 | 0.0 | 647 |
MS.gene000957.t1 | MTR_8g063900 | 42.551 | 792 | 376 | 10 | 9 | 787 | 18 | 743 | 0.0 | 643 |
MS.gene000957.t1 | MTR_5g071827 | 45.294 | 680 | 358 | 3 | 110 | 789 | 1 | 666 | 0.0 | 642 |
MS.gene000957.t1 | MTR_5g070670 | 43.692 | 753 | 403 | 9 | 52 | 789 | 103 | 849 | 0.0 | 627 |
MS.gene000957.t1 | MTR_8g088200 | 42.655 | 776 | 419 | 7 | 31 | 789 | 16 | 782 | 0.0 | 624 |
MS.gene000957.t1 | MTR_8g099090 | 42.784 | 783 | 406 | 11 | 41 | 789 | 18 | 792 | 0.0 | 620 |
MS.gene000957.t1 | MTR_8g022130 | 41.688 | 782 | 421 | 7 | 9 | 789 | 19 | 766 | 0.0 | 618 |
MS.gene000957.t1 | MTR_8g107510 | 39.075 | 778 | 432 | 11 | 40 | 786 | 13 | 779 | 0.0 | 540 |
MS.gene000957.t1 | MTR_3g094090 | 45.349 | 602 | 296 | 4 | 219 | 789 | 10 | 609 | 1.37e-180 | 531 |
MS.gene000957.t1 | MTR_5g034590 | 52.632 | 171 | 81 | 0 | 447 | 617 | 89 | 259 | 2.23e-57 | 200 |
MS.gene000957.t1 | MTR_5g034590 | 41.860 | 86 | 45 | 1 | 109 | 189 | 5 | 90 | 4.79e-14 | 75.1 |
MS.gene000957.t1 | MTR_8g022160 | 47.500 | 200 | 101 | 2 | 9 | 207 | 19 | 215 | 1.18e-52 | 184 |
MS.gene000957.t1 | MTR_2g438170 | 94.805 | 77 | 4 | 0 | 650 | 726 | 1 | 77 | 7.40e-46 | 158 |
MS.gene000957.t1 | MTR_1g029310 | 36.154 | 130 | 76 | 2 | 193 | 322 | 8 | 130 | 2.86e-19 | 85.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000957.t1 | AT1G31120 | 74.904 | 785 | 195 | 2 | 6 | 789 | 13 | 796 | 0.0 | 1186 |
MS.gene000957.t1 | AT2G35060 | 74.841 | 787 | 188 | 7 | 6 | 789 | 13 | 792 | 0.0 | 1174 |
MS.gene000957.t1 | AT2G35060 | 74.841 | 787 | 188 | 7 | 6 | 789 | 13 | 792 | 0.0 | 1174 |
MS.gene000957.t1 | AT2G35060 | 74.841 | 787 | 188 | 7 | 6 | 789 | 13 | 792 | 0.0 | 1174 |
MS.gene000957.t1 | AT2G35060 | 74.746 | 788 | 188 | 8 | 6 | 789 | 13 | 793 | 0.0 | 1169 |
MS.gene000957.t1 | AT4G19960 | 68.647 | 791 | 236 | 3 | 10 | 789 | 18 | 807 | 0.0 | 1056 |
MS.gene000957.t1 | AT4G19960 | 67.286 | 807 | 236 | 4 | 10 | 789 | 18 | 823 | 0.0 | 1047 |
MS.gene000957.t1 | AT4G19960 | 66.463 | 817 | 236 | 4 | 10 | 789 | 18 | 833 | 0.0 | 1043 |
MS.gene000957.t1 | AT4G19960 | 67.753 | 583 | 176 | 3 | 218 | 789 | 5 | 586 | 0.0 | 782 |
MS.gene000957.t1 | AT2G40540 | 47.229 | 794 | 387 | 7 | 28 | 789 | 1 | 794 | 0.0 | 712 |
MS.gene000957.t1 | AT2G40540 | 47.229 | 794 | 387 | 7 | 28 | 789 | 1 | 794 | 0.0 | 712 |
MS.gene000957.t1 | AT2G40540 | 47.229 | 794 | 387 | 7 | 28 | 789 | 1 | 794 | 0.0 | 712 |
MS.gene000957.t1 | AT2G40540 | 47.229 | 794 | 387 | 7 | 28 | 789 | 1 | 794 | 0.0 | 712 |
MS.gene000957.t1 | AT2G40540 | 47.229 | 794 | 387 | 7 | 28 | 789 | 1 | 794 | 0.0 | 712 |
MS.gene000957.t1 | AT3G02050 | 49.030 | 773 | 352 | 7 | 50 | 789 | 26 | 789 | 0.0 | 707 |
MS.gene000957.t1 | AT5G14880 | 49.178 | 791 | 363 | 12 | 28 | 789 | 1 | 781 | 0.0 | 702 |
MS.gene000957.t1 | AT1G60160 | 45.161 | 806 | 410 | 10 | 3 | 789 | 35 | 827 | 0.0 | 699 |
MS.gene000957.t1 | AT1G70300 | 47.014 | 787 | 387 | 9 | 28 | 789 | 1 | 782 | 0.0 | 695 |
MS.gene000957.t1 | AT2G30070 | 44.874 | 751 | 355 | 3 | 42 | 789 | 18 | 712 | 0.0 | 669 |
MS.gene000957.t1 | AT4G13420 | 44.233 | 789 | 415 | 9 | 8 | 787 | 11 | 783 | 0.0 | 669 |
MS.gene000957.t1 | AT4G33530 | 44.264 | 802 | 425 | 9 | 5 | 789 | 59 | 855 | 0.0 | 661 |
MS.gene000957.t1 | AT5G09400 | 43.618 | 807 | 426 | 10 | 5 | 789 | 59 | 858 | 0.0 | 634 |
MS.gene000957.t1 | AT4G23640 | 44.987 | 778 | 394 | 10 | 40 | 789 | 4 | 775 | 0.0 | 633 |
MS.gene000957.t1 | AT2G30070 | 43.277 | 647 | 311 | 2 | 143 | 789 | 2 | 592 | 0.0 | 556 |
MS.gene000957.t1 | AT4G33530 | 44.878 | 615 | 329 | 4 | 184 | 789 | 14 | 627 | 0.0 | 546 |
Find 168 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGCTTTGGTTTCTTCTTAT+TGG | 0.115703 | 2.3:-52983294 | MS.gene000957:CDS |
CAAAGTCTTGGTGTCGTTTA+TGG | 0.150582 | 2.3:-52984482 | MS.gene000957:CDS |
ACAAGGAACCGCTCTTCTTC+TGG | 0.211812 | 2.3:+52980322 | None:intergenic |
TTCTATAACACATTTCCTTA+TGG | 0.260723 | 2.3:-52984431 | MS.gene000957:CDS |
TACAGATGAGACTGGAAAAT+TGG | 0.262617 | 2.3:+52982999 | None:intergenic |
GACAACACTGCTGATGATTT+TGG | 0.271661 | 2.3:-52980746 | MS.gene000957:CDS |
AAAGTAACATTCACATTTGT+TGG | 0.280547 | 2.3:+52980007 | None:intergenic |
TTGCTCCAATTGTTCTGCTT+TGG | 0.305035 | 2.3:-52983308 | MS.gene000957:CDS |
GGAATCTTGCTTAGCATAAC+AGG | 0.312685 | 2.3:-52983153 | MS.gene000957:intron |
TTTCGTTGTGTGGCACGATA+TGG | 0.313994 | 2.3:-52980268 | MS.gene000957:CDS |
AGACATCAATTGGATCCTTA+TGG | 0.316790 | 2.3:-52981570 | MS.gene000957:CDS |
TTCTGGACAGGCTGCATATC+TGG | 0.318775 | 2.3:-52982929 | MS.gene000957:CDS |
ATTCTTATTCTTGTCCTTGT+TGG | 0.320495 | 2.3:-52983783 | MS.gene000957:CDS |
TTCTGATTGTTATGTATGTT+TGG | 0.323587 | 2.3:-52980579 | MS.gene000957:CDS |
ATTATATATATGCATTTCTT+AGG | 0.326736 | 2.3:-52979841 | MS.gene000957:CDS |
TTTCTTCTTATTGGAGGTAT+AGG | 0.330477 | 2.3:-52983285 | MS.gene000957:CDS |
CTTTGCATTGCTGTTACTAC+TGG | 0.332569 | 2.3:-52981545 | MS.gene000957:CDS |
TGGTGTCGTTTATGGAGATC+TGG | 0.336375 | 2.3:-52984474 | MS.gene000957:CDS |
GACACGGACTAGTCCTAAAC+TGG | 0.341327 | 2.3:+52980480 | None:intergenic |
AGCATACCGCTATCGACTTC+AGG | 0.342828 | 2.3:+52983540 | None:intergenic |
ATTTACAACTTGTGGAGATT+TGG | 0.344580 | 2.3:-52983261 | MS.gene000957:CDS |
CTGCTTCTGCATCCATTGGC+TGG | 0.345043 | 2.3:+52984738 | None:intergenic |
TACCATAAGCATTTCCAATC+TGG | 0.350786 | 2.3:+52981507 | None:intergenic |
GTCTCAATGGCATGGATTCT+CGG | 0.361185 | 2.3:-52980511 | MS.gene000957:CDS |
GTTGCTGTTGTAATATTAGT+TGG | 0.362180 | 2.3:-52983378 | MS.gene000957:CDS |
CTCGGGCTCGGTCCCAGTTT+AGG | 0.365770 | 2.3:-52980493 | MS.gene000957:CDS |
CTCAGTACGGTGACTATTAG+AGG | 0.368403 | 2.3:+52979979 | None:intergenic |
AACCAGATTGGAAATGCTTA+TGG | 0.368806 | 2.3:-52981509 | MS.gene000957:intron |
TGGGCACCCCTTGCAATTGC+CGG | 0.373315 | 2.3:-52980607 | MS.gene000957:CDS |
TGATGTCTGGAATATATATC+TGG | 0.379492 | 2.3:+52981585 | None:intergenic |
ACATTTGTTGGAGATCTTGC+AGG | 0.381214 | 2.3:+52980019 | None:intergenic |
ATTCTTGCCCCAGCTATATC+TGG | 0.381455 | 2.3:-52983735 | MS.gene000957:intron |
GATGGTTGGCTTTCCCTTGG+TGG | 0.382238 | 2.3:-52983174 | MS.gene000957:CDS |
TTTCCTGCTTCTGCATCCAT+TGG | 0.388317 | 2.3:+52984734 | None:intergenic |
TATGAAATCTCTCGATTGTT+CGG | 0.389333 | 2.3:+52980114 | None:intergenic |
CTTTGGTTTCTTCTTATTGG+AGG | 0.399132 | 2.3:-52983291 | MS.gene000957:CDS |
CAAGGAACCGCTCTTCTTCT+GGG | 0.399865 | 2.3:+52980323 | None:intergenic |
TTAAATAACTCTAGAGAAGC+TGG | 0.400796 | 2.3:-52979938 | MS.gene000957:CDS |
TCTCTCGATTGTTCGGTTTG+CGG | 0.402058 | 2.3:+52980121 | None:intergenic |
TGTGTTATAGAAAACGTATA+AGG | 0.402759 | 2.3:+52984442 | None:intergenic |
TATATATTCCAGACATCAAT+TGG | 0.404654 | 2.3:-52981580 | MS.gene000957:CDS |
TGCGCTGTTGCTTCTACGAC+TGG | 0.410868 | 2.3:-52984510 | MS.gene000957:CDS |
GATGGAAGGTTGCTCGGATT+CGG | 0.411722 | 2.3:-52980161 | MS.gene000957:CDS |
CGGTTCCTTGTCAAGCGTAT+TGG | 0.412864 | 2.3:-52980310 | MS.gene000957:CDS |
ATCCTCGTTGTTGTGTTCAC+TGG | 0.414051 | 2.3:-52980694 | MS.gene000957:CDS |
GTGTAGACTAGGCCGATTCC+AGG | 0.418903 | 2.3:+52980457 | None:intergenic |
AGAAACCAAAGCAGAACAAT+TGG | 0.424813 | 2.3:+52983303 | None:intergenic |
TATGCACAACTTTGACTCTT+GGG | 0.428719 | 2.3:+52981627 | None:intergenic |
TCATCGGTATGATGCTGGTT+GGG | 0.430563 | 2.3:+52983903 | None:intergenic |
AATCATCGTCTTTCTTATGT+AGG | 0.434327 | 2.3:+52980236 | None:intergenic |
TCAAAATCAATCAAGGTGGC+TGG | 0.435792 | 2.3:-52980627 | MS.gene000957:CDS |
AGCAAATGACTTCTCATTGA+AGG | 0.441057 | 2.3:+52983854 | None:intergenic |
GTATGCACAACTTTGACTCT+TGG | 0.445224 | 2.3:+52981626 | None:intergenic |
GTTGGTACCTGCATGGTGAT+TGG | 0.448680 | 2.3:-52983765 | MS.gene000957:CDS |
TATTAGTTTGGCACTGCCAT+TGG | 0.448736 | 2.3:-52980717 | MS.gene000957:CDS |
TCTCAATGGCATGGATTCTC+GGG | 0.453151 | 2.3:-52980510 | MS.gene000957:CDS |
ATAGATGGTTGGCTTTCCCT+TGG | 0.455467 | 2.3:-52983177 | MS.gene000957:CDS |
TGCAGTTGTGTTAGTCATGC+TGG | 0.464198 | 2.3:-52980770 | MS.gene000957:CDS |
CACAACTTCATTGAGCAATA+CGG | 0.464252 | 2.3:-52980074 | MS.gene000957:CDS |
GATGATCCGGAGAAAGTGAT+TGG | 0.464873 | 2.3:-52984404 | MS.gene000957:CDS |
TCCTTATGGAGTTGATGATC+CGG | 0.469348 | 2.3:-52984417 | MS.gene000957:CDS |
GCTGGTGTTGTTCATATACT+AGG | 0.469813 | 2.3:-52979920 | MS.gene000957:CDS |
TGTTCGGTTTGCGGTTCACA+TGG | 0.471824 | 2.3:+52980130 | None:intergenic |
ATAAGGATCCAATTGATGTC+TGG | 0.481420 | 2.3:+52981572 | None:intergenic |
ATGATAACAAAGGTAGTATG+TGG | 0.482456 | 2.3:-52984781 | MS.gene000957:CDS |
TCCGGATCATCAACTCCATA+AGG | 0.484195 | 2.3:+52984416 | None:intergenic |
GTATGTTTGGCATTACGTTA+CGG | 0.484742 | 2.3:-52980566 | MS.gene000957:CDS |
CTATTCAGCATACAACGTTA+TGG | 0.487468 | 2.3:-52983354 | MS.gene000957:CDS |
CAGCCAATGGATGCAGAAGC+AGG | 0.487597 | 2.3:-52984737 | MS.gene000957:CDS |
TTCATCGGTATGATGCTGGT+TGG | 0.490643 | 2.3:+52983902 | None:intergenic |
TTAGGACTAGTCCGTGTCCC+TGG | 0.492338 | 2.3:-52980475 | MS.gene000957:CDS |
CGAGTCGAACAAACATGAAA+AGG | 0.493469 | 2.3:+52980191 | None:intergenic |
AGAGCTCCAATCACTTTCTC+CGG | 0.496201 | 2.3:+52984398 | None:intergenic |
TTGCTGCTAAAACTCAAAGA+TGG | 0.498623 | 2.3:-52983836 | MS.gene000957:CDS |
TGTTCGACTCGAGTCAATGA+TGG | 0.502377 | 2.3:-52980179 | MS.gene000957:CDS |
GTCAATGATGGAAGGTTGCT+CGG | 0.502606 | 2.3:-52980167 | MS.gene000957:CDS |
GTGTTATAGAAAACGTATAA+GGG | 0.504068 | 2.3:+52984443 | None:intergenic |
TACAACTTGTGGAGATTTGG+TGG | 0.505778 | 2.3:-52983258 | MS.gene000957:CDS |
CTAGTCCGTGTCCCTGGAAT+CGG | 0.505874 | 2.3:-52980469 | MS.gene000957:CDS |
GTACTCTTCAAAATCAATCA+AGG | 0.506281 | 2.3:-52980634 | MS.gene000957:CDS |
ATGGCATGGATTCTCGGGCT+CGG | 0.509081 | 2.3:-52980505 | MS.gene000957:CDS |
GACTGGAAAATTGGCTAAGT+CGG | 0.509630 | 2.3:+52983008 | None:intergenic |
ACTTCTCATTGAAGGTAGTC+CGG | 0.511654 | 2.3:+52983862 | None:intergenic |
TGTCCTTGTTGGTACCTGCA+TGG | 0.511921 | 2.3:-52983772 | MS.gene000957:CDS |
ATCAAGCAAGCCCTTGCTCA+TGG | 0.512255 | 2.3:-52981656 | MS.gene000957:CDS |
ATCTGCTGCTGGTGGCATCA+AGG | 0.516150 | 2.3:-52983571 | MS.gene000957:CDS |
TTTCGCCTCTCTACGTGTAT+CGG | 0.518025 | 2.3:-52983218 | MS.gene000957:CDS |
CTAAGAAACGGACACATAGA+TGG | 0.518281 | 2.3:-52983192 | MS.gene000957:CDS |
AACAAGGACAAGAATAAGAA+TGG | 0.518388 | 2.3:+52983785 | None:intergenic |
TCTTCTGGGACTGTGTAGAC+AGG | 0.518745 | 2.3:+52980337 | None:intergenic |
AGTGTTGCAATTACAAATAC+CGG | 0.519520 | 2.3:+52981728 | None:intergenic |
GTCCAGAATATGCTAAAAGA+AGG | 0.523525 | 2.3:+52982944 | None:intergenic |
CAGCAATGCAAAGAACCATA+AGG | 0.526000 | 2.3:+52981555 | None:intergenic |
GAAAACATACCAGATATAGC+TGG | 0.526765 | 2.3:+52983726 | None:intergenic |
GAAATACTCCGGCAATTGCA+AGG | 0.529532 | 2.3:+52980599 | None:intergenic |
GGTGTCGTTTATGGAGATCT+GGG | 0.529725 | 2.3:-52984473 | MS.gene000957:CDS |
CACTGGCTTATCATTGATTG+TGG | 0.530139 | 2.3:-52980677 | MS.gene000957:CDS |
ATACACGTAGAGAGGCGAAA+AGG | 0.533496 | 2.3:+52983221 | None:intergenic |
ATTGCATAGCAAAGTCTCAA+TGG | 0.534181 | 2.3:-52980524 | MS.gene000957:CDS |
TAATGAAATGAGAAAATATG+TGG | 0.534737 | 2.3:+52980413 | None:intergenic |
CAAAATCAATCAAGGTGGCT+GGG | 0.537653 | 2.3:-52980626 | MS.gene000957:CDS |
TGTTACAGGAGTAGTTGTGC+TGG | 0.540046 | 2.3:-52983400 | MS.gene000957:intron |
AAAACATACCAGATATAGCT+GGG | 0.547103 | 2.3:+52983727 | None:intergenic |
CTTGATGACTGAAAAGGTTG+CGG | 0.552180 | 2.3:+52981673 | None:intergenic |
CATGAGAGTCTCTTAAATGT+TGG | 0.554708 | 2.3:-52979779 | MS.gene000957:CDS |
CGACTGGCATATCAAAGTCT+TGG | 0.555965 | 2.3:-52984494 | MS.gene000957:CDS |
CATACATCAAAGAAATTCCT+CGG | 0.556726 | 2.3:-52981608 | MS.gene000957:CDS |
GTATAGGTATTTACAACTTG+TGG | 0.557069 | 2.3:-52983269 | MS.gene000957:CDS |
TGAAAAGGTTGCGGTGATTG+TGG | 0.559121 | 2.3:+52981682 | None:intergenic |
GTCTACACAGAGCTTGCAAG+TGG | 0.564596 | 2.3:-52980442 | MS.gene000957:CDS |
TTGGGAAACATCCATGAGCA+AGG | 0.566397 | 2.3:+52981645 | None:intergenic |
GTGTATCGGTATCTAAGAAA+CGG | 0.567156 | 2.3:-52983204 | MS.gene000957:CDS |
CTGGAATATATATCTGGCCG+AGG | 0.568056 | 2.3:+52981591 | None:intergenic |
AAATACTCCGGCAATTGCAA+GGG | 0.569970 | 2.3:+52980600 | None:intergenic |
ACAACAACGGAATGGATCGC+TGG | 0.570518 | 2.3:+52980382 | None:intergenic |
ATTTGCATGTCGGCAGAGCA+AGG | 0.572919 | 2.3:+52983938 | None:intergenic |
AGGTTGCGGTGATTGTGGCT+TGG | 0.574303 | 2.3:+52981687 | None:intergenic |
TTGCAAGCTCTGTGTAGACT+AGG | 0.574990 | 2.3:+52980446 | None:intergenic |
GCAATTTGTACAGATGAGAC+TGG | 0.575023 | 2.3:+52982991 | None:intergenic |
GATTTCATATTGAATAACAA+TGG | 0.579037 | 2.3:-52980100 | MS.gene000957:CDS |
TTCTCTTCATCAATCTCTAA+CGG | 0.581968 | 2.3:+52984803 | None:intergenic |
ACAAATTGCGTTTACTCTCG+TGG | 0.581979 | 2.3:-52982977 | MS.gene000957:CDS |
GGCTTGCTTGATGACTGAAA+AGG | 0.583476 | 2.3:+52981667 | None:intergenic |
CAACGGAATGGATCGCTGGT+AGG | 0.584685 | 2.3:+52980386 | None:intergenic |
TGATCTTTATATTTGCATGT+CGG | 0.585102 | 2.3:+52983928 | None:intergenic |
AAACGAAAACAACAACGGAA+TGG | 0.585282 | 2.3:+52980374 | None:intergenic |
GAATATGCTAAAAGAAGGCA+AGG | 0.585635 | 2.3:+52982949 | None:intergenic |
ACCATCTCCAATCACCATGC+AGG | 0.586550 | 2.3:+52983758 | None:intergenic |
ATGGTACAGATAGAGTTGGT+TGG | 0.587725 | 2.3:-52983335 | MS.gene000957:CDS |
ACAGAAATTTGACCAGCCAA+TGG | 0.587891 | 2.3:-52984750 | MS.gene000957:CDS |
CTATGGAGCAGGTGGAACAC+TGG | 0.589294 | 2.3:-52983970 | MS.gene000957:intron |
CATAACAATCAGAAATACTC+CGG | 0.589596 | 2.3:+52980588 | None:intergenic |
AAAAGTTGACAACATATAGC+CGG | 0.589733 | 2.3:-52983881 | MS.gene000957:CDS |
TGATAACAAAGGTAGTATGT+GGG | 0.590068 | 2.3:-52984780 | MS.gene000957:CDS |
ACCTGCATGGTGATTGGAGA+TGG | 0.597718 | 2.3:-52983759 | MS.gene000957:CDS |
CGTTATGGTACAGATAGAGT+TGG | 0.598043 | 2.3:-52983339 | MS.gene000957:CDS |
AGAGCAAACGACAATGGTCA+AGG | 0.601997 | 2.3:-52984314 | MS.gene000957:intron |
TACTAGGAAACACAGTTGTG+AGG | 0.606169 | 2.3:-52979904 | MS.gene000957:CDS |
ACTAGGAAACACAGTTGTGA+GGG | 0.611256 | 2.3:-52979903 | MS.gene000957:CDS |
GATGAAGAGAATGATAACAA+AGG | 0.612309 | 2.3:-52984791 | MS.gene000957:CDS |
CAAGTTCATCAACCTCAGTA+CGG | 0.613970 | 2.3:+52979966 | None:intergenic |
GAAACGGACACATAGATGGT+TGG | 0.614401 | 2.3:-52983188 | MS.gene000957:CDS |
TTGGTCCAATACGCTTGACA+AGG | 0.615523 | 2.3:+52980305 | None:intergenic |
ACACAACAACGAGGATCCAA+TGG | 0.620185 | 2.3:+52980701 | None:intergenic |
TGGGAAACATCCATGAGCAA+GGG | 0.620410 | 2.3:+52981646 | None:intergenic |
GCTAAGCAAGATTCCACCAA+GGG | 0.622974 | 2.3:+52983161 | None:intergenic |
CTAGGCCGATTCCAGGGACA+CGG | 0.628200 | 2.3:+52980464 | None:intergenic |
TGTAGACTAGGCCGATTCCA+GGG | 0.629843 | 2.3:+52980458 | None:intergenic |
CTCTAATAGTCACCGTACTG+AGG | 0.635203 | 2.3:-52979978 | MS.gene000957:CDS |
CGACTCGAGTCAATGATGGA+AGG | 0.639714 | 2.3:-52980175 | MS.gene000957:CDS |
GACACAAACGAAAACAACAA+CGG | 0.645561 | 2.3:+52980369 | None:intergenic |
ATAGCAAAGTCTCAATGGCA+TGG | 0.650531 | 2.3:-52980519 | MS.gene000957:CDS |
AATGAAATGAGAAAATATGT+GGG | 0.652566 | 2.3:+52980414 | None:intergenic |
ATAACAAACCTGGAATAGAA+CGG | 0.658427 | 2.3:+52982872 | None:intergenic |
TCACCATGCAGGTACCAACA+AGG | 0.662761 | 2.3:+52983769 | None:intergenic |
AATACTCCGGCAATTGCAAG+GGG | 0.664458 | 2.3:+52980601 | None:intergenic |
ATGAAAACGTATTTGAGCAG+CGG | 0.669648 | 2.3:+52984344 | None:intergenic |
GTATTAAGAGCAAACGACAA+TGG | 0.678001 | 2.3:-52984320 | MS.gene000957:CDS |
AGATACCGATACACGTAGAG+AGG | 0.682817 | 2.3:+52983213 | None:intergenic |
AACAAACCTGAAGTCGATAG+CGG | 0.685650 | 2.3:-52983546 | MS.gene000957:intron |
CTCTTCAAAATCAATCAAGG+TGG | 0.699200 | 2.3:-52980631 | MS.gene000957:CDS |
TGCTAAGCAAGATTCCACCA+AGG | 0.701088 | 2.3:+52983160 | None:intergenic |
ACACGGACTAGTCCTAAACT+GGG | 0.702716 | 2.3:+52980481 | None:intergenic |
ATGAAATGAGAAAATATGTG+GGG | 0.706454 | 2.3:+52980415 | None:intergenic |
ACACAGTCCCAGAAGAAGAG+CGG | 0.710327 | 2.3:-52980330 | MS.gene000957:CDS |
AAACATACCAGATATAGCTG+GGG | 0.718114 | 2.3:+52983728 | None:intergenic |
ACATTTAAGAGACTCTCATG+AGG | 0.718347 | 2.3:+52979782 | None:intergenic |
AGCCAGTGAACACAACAACG+AGG | 0.791349 | 2.3:+52980692 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAACATGAAAAAAAAAA+TGG | + | chr2.3:52983118-52983137 | None:intergenic | 10.0% |
!! | AAAAAAGTTAAAAGAAAATT+TGG | + | chr2.3:52979897-52979916 | None:intergenic | 10.0% |
!!! | TGTTTTAAAATTATTCAATA+AGG | - | chr2.3:52981478-52981497 | MS.gene000957:intron | 10.0% |
!! | AAAAGATTAATGTATGTTAA+AGG | + | chr2.3:52981064-52981083 | None:intergenic | 15.0% |
!! | AAATTATTCAATAAGGTAAA+CGG | - | chr2.3:52981485-52981504 | MS.gene000957:intron | 15.0% |
!! | AATCATTACAACATTAAAAA+GGG | - | chr2.3:52983252-52983271 | MS.gene000957:CDS | 15.0% |
!! | ATTATATATATGCATTTCTT+AGG | - | chr2.3:52984731-52984750 | MS.gene000957:CDS | 15.0% |
!! | TAATCATTACAACATTAAAA+AGG | - | chr2.3:52983251-52983270 | MS.gene000957:CDS | 15.0% |
!!! | ACATTTTAAGTAAAAACAAA+TGG | - | chr2.3:52981867-52981886 | MS.gene000957:intron | 15.0% |
!!! | TTGAATATTGAATTATTTTG+AGG | + | chr2.3:52981928-52981947 | None:intergenic | 15.0% |
!! | AAAAAGGAAAGAAAAATGAT+CGG | + | chr2.3:52980914-52980933 | None:intergenic | 20.0% |
!! | AATGAAATGAGAAAATATGT+GGG | + | chr2.3:52984161-52984180 | None:intergenic | 20.0% |
!! | AGGAATACTATTATAACTTT+AGG | - | chr2.3:52980333-52980352 | MS.gene000957:CDS | 20.0% |
!! | ATTCACAATTCGAAAAAAAT+AGG | + | chr2.3:52981801-52981820 | None:intergenic | 20.0% |
!! | GATTTCATATTGAATAACAA+TGG | - | chr2.3:52984472-52984491 | MS.gene000957:CDS | 20.0% |
!! | GGAATACTATTATAACTTTA+GGG | - | chr2.3:52980334-52980353 | MS.gene000957:CDS | 20.0% |
!! | GTTGACAAAAAAAAAAAAGA+TGG | - | chr2.3:52981996-52982015 | MS.gene000957:intron | 20.0% |
!! | TAATGAAATGAGAAAATATG+TGG | + | chr2.3:52984162-52984181 | None:intergenic | 20.0% |
!! | TAATTGCTTAATGATTGAAA+AGG | + | chr2.3:52982667-52982686 | None:intergenic | 20.0% |
!! | TTAGAATATCATAAACCTAT+TGG | - | chr2.3:52982630-52982649 | MS.gene000957:intron | 20.0% |
!! | TTTAAAAATCAAAACCAGAT+TGG | - | chr2.3:52983051-52983070 | MS.gene000957:intron | 20.0% |
!! | TTTATGATATTCTAAATGCA+TGG | + | chr2.3:52982625-52982644 | None:intergenic | 20.0% |
!!! | AAAAAGTGTAACATAATTAG+GGG | - | chr2.3:52983477-52983496 | MS.gene000957:intron | 20.0% |
!!! | AACAAATTTTTTCAGCAAAA+AGG | + | chr2.3:52980930-52980949 | None:intergenic | 20.0% |
!!! | ACAAAAAGTGTAACATAATT+AGG | - | chr2.3:52983475-52983494 | MS.gene000957:intron | 20.0% |
!!! | AGTTTCTAGTTTTTTTTCAT+TGG | - | chr2.3:52981112-52981131 | MS.gene000957:intron | 20.0% |
!!! | CAAAAAGTGTAACATAATTA+GGG | - | chr2.3:52983476-52983495 | MS.gene000957:intron | 20.0% |
!!! | TATTTTGTTTACATATGACA+GGG | - | chr2.3:52979932-52979951 | MS.gene000957:CDS | 20.0% |
!!! | TTAATTTGGATATTAATGGT+TGG | - | chr2.3:52980306-52980325 | MS.gene000957:CDS | 20.0% |
!!! | TTGGTTAATTTGGATATTAA+TGG | - | chr2.3:52980302-52980321 | MS.gene000957:CDS | 20.0% |
!!! | TTTTGTATTGCATATCAATT+GGG | - | chr2.3:52982534-52982553 | MS.gene000957:intron | 20.0% |
! | AAAGTAACATTCACATTTGT+TGG | + | chr2.3:52984568-52984587 | None:intergenic | 25.0% |
! | AATACAGAATCCATCTAATT+TGG | - | chr2.3:52980428-52980447 | MS.gene000957:CDS | 25.0% |
! | ACGTTGAAAATTTGCAATAT+AGG | - | chr2.3:52983225-52983244 | MS.gene000957:CDS | 25.0% |
! | AGTATGTTGTCTATAAAAGT+GGG | - | chr2.3:52983609-52983628 | MS.gene000957:intron | 25.0% |
! | ATCTGTACTAAATACTATGA+TGG | + | chr2.3:52983452-52983471 | None:intergenic | 25.0% |
! | ATGAAATGAGAAAATATGTG+GGG | + | chr2.3:52984160-52984179 | None:intergenic | 25.0% |
! | ATTCAAAATCTCTACATAGT+AGG | - | chr2.3:52982452-52982471 | MS.gene000957:intron | 25.0% |
! | CAACTTTGTAATTGTATACT+TGG | + | chr2.3:52981980-52981999 | None:intergenic | 25.0% |
! | CAATGTAAAGAAATTAGGAA+AGG | + | chr2.3:52983278-52983297 | None:intergenic | 25.0% |
! | CCTAATTTCTTTACATTGAA+GGG | - | chr2.3:52983280-52983299 | MS.gene000957:CDS | 25.0% |
! | CTATAATCTCATATTCATAG+TGG | + | chr2.3:52981094-52981113 | None:intergenic | 25.0% |
! | GAATTCAAAAAATGTATTCG+AGG | - | chr2.3:52980453-52980472 | MS.gene000957:CDS | 25.0% |
! | GTGTTATAGAAAACGTATAA+GGG | + | chr2.3:52980132-52980151 | None:intergenic | 25.0% |
! | TAAGATCTAGTATATCTTCT+TGG | + | chr2.3:52983710-52983729 | None:intergenic | 25.0% |
! | TAGCAAGGAAAAATTTATCT+AGG | + | chr2.3:52980493-52980512 | None:intergenic | 25.0% |
! | TAGTATGTTGTCTATAAAAG+TGG | - | chr2.3:52983608-52983627 | MS.gene000957:intron | 25.0% |
! | TATATATTCCAGACATCAAT+TGG | - | chr2.3:52982992-52983011 | MS.gene000957:CDS | 25.0% |
! | TCCTAATTTCTTTACATTGA+AGG | - | chr2.3:52983279-52983298 | MS.gene000957:CDS | 25.0% |
! | TGATCTTTATATTTGCATGT+CGG | + | chr2.3:52980647-52980666 | None:intergenic | 25.0% |
! | TGTGTTATAGAAAACGTATA+AGG | + | chr2.3:52980133-52980152 | None:intergenic | 25.0% |
! | TTCAAAATCTCTACATAGTA+GGG | - | chr2.3:52982453-52982472 | MS.gene000957:intron | 25.0% |
! | TTCTATAACACATTTCCTTA+TGG | - | chr2.3:52980141-52980160 | MS.gene000957:CDS | 25.0% |
! | TTCTGATTGTTATGTATGTT+TGG | - | chr2.3:52983993-52984012 | MS.gene000957:intron | 25.0% |
!! | ATATGTTGTCAACTTTTCAT+CGG | + | chr2.3:52980688-52980707 | None:intergenic | 25.0% |
!! | GTTTTGTATTGCATATCAAT+TGG | - | chr2.3:52982533-52982552 | MS.gene000957:intron | 25.0% |
!! | TTTTGGTCATGATATTAGTT+TGG | - | chr2.3:52983843-52983862 | MS.gene000957:CDS | 25.0% |
!!! | ATATTTTTTCTGCAGAACTA+AGG | + | chr2.3:52982819-52982838 | None:intergenic | 25.0% |
!!! | CTATTTTGTTTACATATGAC+AGG | - | chr2.3:52979931-52979950 | MS.gene000957:CDS | 25.0% |
AAAACATACCAGATATAGCT+GGG | + | chr2.3:52980848-52980867 | None:intergenic | 30.0% | |
AAAAGTTGACAACATATAGC+CGG | - | chr2.3:52980691-52980710 | MS.gene000957:CDS | 30.0% | |
AAACTAATTATGTCTCCTCA+AGG | + | chr2.3:52983423-52983442 | None:intergenic | 30.0% | |
AACAAGGACAAGAATAAGAA+TGG | + | chr2.3:52980790-52980809 | None:intergenic | 30.0% | |
AACTAATTATGTCTCCTCAA+GGG | + | chr2.3:52983422-52983441 | None:intergenic | 30.0% | |
AAGAGTTTATATAGAAGAGG+AGG | - | chr2.3:52982331-52982350 | MS.gene000957:intron | 30.0% | |
AAGATGGATACACTAAGTTT+AGG | - | chr2.3:52982012-52982031 | MS.gene000957:intron | 30.0% | |
AATCATCGTCTTTCTTATGT+AGG | + | chr2.3:52984339-52984358 | None:intergenic | 30.0% | |
AATCCTATCTATTTGATGTG+GGG | + | chr2.3:52982078-52982097 | None:intergenic | 30.0% | |
AGAATCCTATCTATTTGATG+TGG | + | chr2.3:52982080-52982099 | None:intergenic | 30.0% | |
AGTAGGGATTCATATCAATT+GGG | - | chr2.3:52982506-52982525 | MS.gene000957:intron | 30.0% | |
AGTGTTGCAATTACAAATAC+CGG | + | chr2.3:52982847-52982866 | None:intergenic | 30.0% | |
ATAACAAACCTGGAATAGAA+CGG | + | chr2.3:52981703-52981722 | None:intergenic | 30.0% | |
ATAATAATGCAGCTGAATGA+AGG | - | chr2.3:52983515-52983534 | MS.gene000957:intron | 30.0% | |
ATCCAAATTAACCAAACAGT+TGG | + | chr2.3:52980297-52980316 | None:intergenic | 30.0% | |
ATGATAACAAAGGTAGTATG+TGG | - | chr2.3:52979791-52979810 | MS.gene000957:CDS | 30.0% | |
ATTCTTATTCTTGTCCTTGT+TGG | - | chr2.3:52980789-52980808 | MS.gene000957:intron | 30.0% | |
ATTTACAACTTGTGGAGATT+TGG | - | chr2.3:52981311-52981330 | MS.gene000957:intron | 30.0% | |
CATAACAATCAGAAATACTC+CGG | + | chr2.3:52983987-52984006 | None:intergenic | 30.0% | |
CATACATCAAAGAAATTCCT+CGG | - | chr2.3:52982964-52982983 | MS.gene000957:CDS | 30.0% | |
CCCTTCAATGTAAAGAAATT+AGG | + | chr2.3:52983283-52983302 | None:intergenic | 30.0% | |
CGAAAAATGTGGTAATTCTT+TGG | + | chr2.3:52984289-52984308 | None:intergenic | 30.0% | |
CGAGATTCAAATCAAGAATT+GGG | - | chr2.3:52981772-52981791 | MS.gene000957:intron | 30.0% | |
CTTCTATATAAACTCTTCTC+AGG | + | chr2.3:52982328-52982347 | None:intergenic | 30.0% | |
CTTGAGAAGAGTTTATATAG+AGG | - | chr2.3:52982098-52982117 | MS.gene000957:intron | 30.0% | |
GAATCCTATCTATTTGATGT+GGG | + | chr2.3:52982079-52982098 | None:intergenic | 30.0% | |
GAATTTGTCCTTGTAATGAA+AGG | - | chr2.3:52983776-52983795 | MS.gene000957:CDS | 30.0% | |
GAGAAGAGTTTATATAGAAG+AGG | - | chr2.3:52982328-52982347 | MS.gene000957:intron | 30.0% | |
GAGGATATGAAATCATCTAA+AGG | - | chr2.3:52983188-52983207 | MS.gene000957:CDS | 30.0% | |
GATGAAGAGAATGATAACAA+AGG | - | chr2.3:52979781-52979800 | MS.gene000957:CDS | 30.0% | |
GCTAAACATAACTAACGTAA+CGG | - | chr2.3:52983674-52983693 | MS.gene000957:intron | 30.0% | |
GTACTCTTCAAAATCAATCA+AGG | - | chr2.3:52983938-52983957 | MS.gene000957:CDS | 30.0% | |
GTATAGGTATTTACAACTTG+TGG | - | chr2.3:52981303-52981322 | MS.gene000957:intron | 30.0% | |
GTTCTGCAGAAAAAATATAC+TGG | - | chr2.3:52982821-52982840 | MS.gene000957:intron | 30.0% | |
TAGTAGGGATTCATATCAAT+TGG | - | chr2.3:52982505-52982524 | MS.gene000957:intron | 30.0% | |
TATGAAATCTCTCGATTGTT+CGG | + | chr2.3:52984461-52984480 | None:intergenic | 30.0% | |
TCGAGATTCAAATCAAGAAT+TGG | - | chr2.3:52981771-52981790 | MS.gene000957:intron | 30.0% | |
TGATAACAAAGGTAGTATGT+GGG | - | chr2.3:52979792-52979811 | MS.gene000957:CDS | 30.0% | |
TGATACCATGAAACGAAAAT+CGG | + | chr2.3:52982171-52982190 | None:intergenic | 30.0% | |
TGTTTGGGAGTTTAGAAAAA+AGG | - | chr2.3:52980359-52980378 | MS.gene000957:CDS | 30.0% | |
TTCAAAAAATGTATTCGAGG+AGG | - | chr2.3:52980456-52980475 | MS.gene000957:CDS | 30.0% | |
TTCCAACTGTTTGGTTAATT+TGG | - | chr2.3:52980292-52980311 | MS.gene000957:CDS | 30.0% | |
TTCTCTTCATCAATCTCTAA+CGG | + | chr2.3:52979772-52979791 | None:intergenic | 30.0% | |
TTGAATTCCTCCAAATTAGA+TGG | + | chr2.3:52980441-52980460 | None:intergenic | 30.0% | |
TTTAACCAAGCTTACATCTA+TGG | - | chr2.3:52980585-52980604 | MS.gene000957:CDS | 30.0% | |
! | AGATGGATTCTGTATTATGA+AGG | + | chr2.3:52980424-52980443 | None:intergenic | 30.0% |
! | AGCTCTTAAACTTTGTTTAC+TGG | + | chr2.3:52983735-52983754 | None:intergenic | 30.0% |
! | ATATCTGGTATGTTTTCTGT+CGG | - | chr2.3:52980852-52980871 | MS.gene000957:intron | 30.0% |
! | GATGGATTCTGTATTATGAA+GGG | + | chr2.3:52980423-52980442 | None:intergenic | 30.0% |
! | GTTGCTGTTGTAATATTAGT+TGG | - | chr2.3:52981194-52981213 | MS.gene000957:intron | 30.0% |
! | TAACATAATTAGGGGTATAG+TGG | - | chr2.3:52983485-52983504 | MS.gene000957:intron | 30.0% |
! | TGATGTCTGGAATATATATC+TGG | + | chr2.3:52982990-52983009 | None:intergenic | 30.0% |
! | TGTATTGTTTTCCAACTGTT+TGG | - | chr2.3:52980283-52980302 | MS.gene000957:CDS | 30.0% |
! | TGTGGAATGCACATATTTTT+CGG | - | chr2.3:52983913-52983932 | MS.gene000957:CDS | 30.0% |
! | TTAAATAACTCTAGAGAAGC+TGG | - | chr2.3:52984634-52984653 | MS.gene000957:intron | 30.0% |
! | TTTCTTCTTATTGGAGGTAT+AGG | - | chr2.3:52981287-52981306 | MS.gene000957:intron | 30.0% |
!! | GGAGGAAGTATCAAATAAAT+AGG | + | chr2.3:52980893-52980912 | None:intergenic | 30.0% |
!! | TATAACTTTAGGGTCTGTTT+GGG | - | chr2.3:52980344-52980363 | MS.gene000957:CDS | 30.0% |
!! | TTATAACTTTAGGGTCTGTT+TGG | - | chr2.3:52980343-52980362 | MS.gene000957:CDS | 30.0% |
AAACATACCAGATATAGCTG+GGG | + | chr2.3:52980847-52980866 | None:intergenic | 35.0% | |
AAACGAAAACAACAACGGAA+TGG | + | chr2.3:52984201-52984220 | None:intergenic | 35.0% | |
AACCAGATTGGAAATGCTTA+TGG | - | chr2.3:52983063-52983082 | MS.gene000957:intron | 35.0% | |
AACTTGTGATGATTGCTTTC+AGG | - | chr2.3:52981524-52981543 | MS.gene000957:CDS | 35.0% | |
AAGGAAAGAAAAATGATCGG+AGG | + | chr2.3:52980911-52980930 | None:intergenic | 35.0% | |
ACAGAATCCATCTAATTTGG+AGG | - | chr2.3:52980431-52980450 | MS.gene000957:CDS | 35.0% | |
ACATTTAAGAGACTCTCATG+AGG | + | chr2.3:52984793-52984812 | None:intergenic | 35.0% | |
ACTTGTGATGATTGCTTTCA+GGG | - | chr2.3:52981525-52981544 | MS.gene000957:CDS | 35.0% | |
AGAAACCAAAGCAGAACAAT+TGG | + | chr2.3:52981272-52981291 | None:intergenic | 35.0% | |
AGACATCAATTGGATCCTTA+TGG | - | chr2.3:52983002-52983021 | MS.gene000957:CDS | 35.0% | |
AGAGAGAAAATGCAACTTGT+AGG | - | chr2.3:52983166-52983185 | MS.gene000957:CDS | 35.0% | |
AGCAAATGACTTCTCATTGA+AGG | + | chr2.3:52980721-52980740 | None:intergenic | 35.0% | |
ATAAGGATCCAATTGATGTC+TGG | + | chr2.3:52983003-52983022 | None:intergenic | 35.0% | |
ATACCATGAAACGAAAATCG+GGG | + | chr2.3:52982169-52982188 | None:intergenic | 35.0% | |
ATGAAAACGTATTTGAGCAG+CGG | + | chr2.3:52980231-52980250 | None:intergenic | 35.0% | |
ATTGCATAGCAAAGTCTCAA+TGG | - | chr2.3:52984048-52984067 | MS.gene000957:intron | 35.0% | |
CACAACTTCATTGAGCAATA+CGG | - | chr2.3:52984498-52984517 | MS.gene000957:CDS | 35.0% | |
CATGAGAGTCTCTTAAATGT+TGG | - | chr2.3:52984793-52984812 | MS.gene000957:CDS | 35.0% | |
CTAACTCATCCTTACAAAAC+CGG | + | chr2.3:52982145-52982164 | None:intergenic | 35.0% | |
CTAACTTCGTCCCTAAATAT+AGG | - | chr2.3:52983314-52983333 | MS.gene000957:CDS | 35.0% | |
CTATTCAGCATACAACGTTA+TGG | - | chr2.3:52981218-52981237 | MS.gene000957:intron | 35.0% | |
CTCTTCAAAATCAATCAAGG+TGG | - | chr2.3:52983941-52983960 | MS.gene000957:CDS | 35.0% | |
GAAAACATACCAGATATAGC+TGG | + | chr2.3:52980849-52980868 | None:intergenic | 35.0% | |
GAATATGCTAAAAGAAGGCA+AGG | + | chr2.3:52981626-52981645 | None:intergenic | 35.0% | |
GACACAAACGAAAACAACAA+CGG | + | chr2.3:52984206-52984225 | None:intergenic | 35.0% | |
GAGAAGAGTTTATATAGAGG+AGG | - | chr2.3:52982101-52982120 | MS.gene000957:intron | 35.0% | |
GATACCATGAAACGAAAATC+GGG | + | chr2.3:52982170-52982189 | None:intergenic | 35.0% | |
GGAGTTTAGAAAAAAGGAAG+GGG | - | chr2.3:52980365-52980384 | MS.gene000957:CDS | 35.0% | |
GGATATTAATGGTTGGACTA+AGG | - | chr2.3:52980313-52980332 | MS.gene000957:CDS | 35.0% | |
GGGAGTTTAGAAAAAAGGAA+GGG | - | chr2.3:52980364-52980383 | MS.gene000957:CDS | 35.0% | |
GTATGTTTGGCATTACGTTA+CGG | - | chr2.3:52984006-52984025 | MS.gene000957:intron | 35.0% | |
GTATTAAGAGCAAACGACAA+TGG | - | chr2.3:52980252-52980271 | MS.gene000957:CDS | 35.0% | |
GTCAACGAGTCCTATATTTA+GGG | + | chr2.3:52983327-52983346 | None:intergenic | 35.0% | |
GTCCAGAATATGCTAAAAGA+AGG | + | chr2.3:52981631-52981650 | None:intergenic | 35.0% | |
TACAGATGAGACTGGAAAAT+TGG | + | chr2.3:52981576-52981595 | None:intergenic | 35.0% | |
TACCATAAGCATTTCCAATC+TGG | + | chr2.3:52983068-52983087 | None:intergenic | 35.0% | |
TATCATCAACCAGCAAATGA+AGG | - | chr2.3:52983565-52983584 | MS.gene000957:CDS | 35.0% | |
TATGCACAACTTTGACTCTT+GGG | + | chr2.3:52982948-52982967 | None:intergenic | 35.0% | |
TGAACCCAATTGATATGAAC+CGG | + | chr2.3:52982375-52982394 | None:intergenic | 35.0% | |
TGCAGAAAAAATATACTGGC+CGG | - | chr2.3:52982825-52982844 | MS.gene000957:intron | 35.0% | |
TGGGAGTTTAGAAAAAAGGA+AGG | - | chr2.3:52980363-52980382 | MS.gene000957:CDS | 35.0% | |
TGTGACAGATATAACAAACC+TGG | + | chr2.3:52981713-52981732 | None:intergenic | 35.0% | |
TTCATGGTATCAAAGCCTAT+CGG | - | chr2.3:52982179-52982198 | MS.gene000957:intron | 35.0% | |
TTGCTGCTAAAACTCAAAGA+TGG | - | chr2.3:52980736-52980755 | MS.gene000957:CDS | 35.0% | |
! | AATGTATTCGAGGAGGATTT+TGG | - | chr2.3:52980463-52980482 | MS.gene000957:CDS | 35.0% |
! | CTGCTTTGGTTTCTTCTTAT+TGG | - | chr2.3:52981278-52981297 | MS.gene000957:intron | 35.0% |
! | CTTTGGTTTCTTCTTATTGG+AGG | - | chr2.3:52981281-52981300 | MS.gene000957:intron | 35.0% |
! | GTGTATCGGTATCTAAGAAA+CGG | - | chr2.3:52981368-52981387 | MS.gene000957:intron | 35.0% |
! | GTTTTGTAAGTTTACCCTTG+AGG | - | chr2.3:52983405-52983424 | MS.gene000957:intron | 35.0% |
! | TCTTTTAGCATATTCTGGAC+AGG | - | chr2.3:52981631-52981650 | MS.gene000957:CDS | 35.0% |
! | TGCCTTCTTTTAGCATATTC+TGG | - | chr2.3:52981626-52981645 | MS.gene000957:CDS | 35.0% |
! | TTACCACATTTTTCGTTGTG+TGG | - | chr2.3:52984294-52984313 | MS.gene000957:intron | 35.0% |
!! | AAGGTTGTGTTGTTTCCAAT+AGG | + | chr2.3:52982648-52982667 | None:intergenic | 35.0% |
!!! | TATGTAGTTTTATCTGCTGC+TGG | - | chr2.3:52980990-52981009 | MS.gene000957:intron | 35.0% |
!!! | TTTCTCTTTTTTTTCCGCCT+TGG | - | chr2.3:52981149-52981168 | MS.gene000957:intron | 35.0% |
AAATACTCCGGCAATTGCAA+GGG | + | chr2.3:52983975-52983994 | None:intergenic | 40.0% | |
AACAAACCTGAAGTCGATAG+CGG | - | chr2.3:52981026-52981045 | MS.gene000957:intron | 40.0% | |
ACAAATTGCGTTTACTCTCG+TGG | - | chr2.3:52981595-52981614 | MS.gene000957:CDS | 40.0% | |
ACAGAAATTTGACCAGCCAA+TGG | - | chr2.3:52979822-52979841 | MS.gene000957:CDS | 40.0% | |
ACATAAGCGATTGTGTAGCA+AGG | + | chr2.3:52980508-52980527 | None:intergenic | 40.0% | |
ACTAGGAAACACAGTTGTGA+GGG | - | chr2.3:52984669-52984688 | MS.gene000957:intron | 40.0% | |
ACTTCTCATTGAAGGTAGTC+CGG | + | chr2.3:52980713-52980732 | None:intergenic | 40.0% | |
AGAAAAAAGGAAGGGGTAAG+TGG | - | chr2.3:52980372-52980391 | MS.gene000957:CDS | 40.0% | |
ATAGCAAAGTCTCAATGGCA+TGG | - | chr2.3:52984053-52984072 | MS.gene000957:intron | 40.0% | |
ATCACCGCAAGCATATCAAT+TGG | - | chr2.3:52982721-52982740 | MS.gene000957:intron | 40.0% | |
CAAAATCAATCAAGGTGGCT+GGG | - | chr2.3:52983946-52983965 | MS.gene000957:CDS | 40.0% | |
CAAGTTCATCAACCTCAGTA+CGG | + | chr2.3:52984609-52984628 | None:intergenic | 40.0% | |
CAGCAATGCAAAGAACCATA+AGG | + | chr2.3:52983020-52983039 | None:intergenic | 40.0% | |
CATAGTAGGGATCTCTACAT+AGG | - | chr2.3:52982466-52982485 | MS.gene000957:intron | 40.0% | |
CGAGTCGAACAAACATGAAA+AGG | + | chr2.3:52984384-52984403 | None:intergenic | 40.0% | |
CGTTATGGTACAGATAGAGT+TGG | - | chr2.3:52981233-52981252 | MS.gene000957:intron | 40.0% | |
CTAAGAAACGGACACATAGA+TGG | - | chr2.3:52981380-52981399 | MS.gene000957:intron | 40.0% | |
CTTTCTTAGTTCCCGTGATT+TGG | + | chr2.3:52983349-52983368 | None:intergenic | 40.0% | |
GAAAGTAAGCCTTCATTTGC+TGG | + | chr2.3:52983577-52983596 | None:intergenic | 40.0% | |
GAATCCTATCTATCCGATGT+GGG | + | chr2.3:52982306-52982325 | None:intergenic | 40.0% | |
GACTGGAAAATTGGCTAAGT+CGG | + | chr2.3:52981567-52981586 | None:intergenic | 40.0% | |
GAGAAAATGCAACTTGTAGG+AGG | - | chr2.3:52983169-52983188 | MS.gene000957:CDS | 40.0% | |
GCAATTTGTACAGATGAGAC+TGG | + | chr2.3:52981584-52981603 | None:intergenic | 40.0% | |
GGAATCTTGCTTAGCATAAC+AGG | - | chr2.3:52981419-52981438 | MS.gene000957:intron | 40.0% | |
GGTCAACGAGTCCTATATTT+AGG | + | chr2.3:52983328-52983347 | None:intergenic | 40.0% | |
GTATGCACAACTTTGACTCT+TGG | + | chr2.3:52982949-52982968 | None:intergenic | 40.0% | |
TACAACTTGTGGAGATTTGG+TGG | - | chr2.3:52981314-52981333 | MS.gene000957:intron | 40.0% | |
TACTAGGAAACACAGTTGTG+AGG | - | chr2.3:52984668-52984687 | MS.gene000957:intron | 40.0% | |
TAGCCCCACATCAAATAGAT+AGG | - | chr2.3:52982072-52982091 | MS.gene000957:intron | 40.0% | |
TATGCTTGCGGTGATTGAAA+AGG | + | chr2.3:52982716-52982735 | None:intergenic | 40.0% | |
TCAAAATCAATCAAGGTGGC+TGG | - | chr2.3:52983945-52983964 | MS.gene000957:CDS | 40.0% | |
TCACCGCAAGCATATCAATT+GGG | - | chr2.3:52982722-52982741 | MS.gene000957:intron | 40.0% | |
TCATGGTATCAAAGCCTATC+GGG | - | chr2.3:52982180-52982199 | MS.gene000957:intron | 40.0% | |
TCTTGTTAGCATCCAACACT+CGG | - | chr2.3:52982042-52982061 | MS.gene000957:intron | 40.0% | |
TTGCTCCAATTGTTCTGCTT+TGG | - | chr2.3:52981264-52981283 | MS.gene000957:intron | 40.0% | |
! | ACAAGCCGGTTCATATCAAT+TGG | - | chr2.3:52982367-52982386 | MS.gene000957:intron | 40.0% |
! | ACATTTGTTGGAGATCTTGC+AGG | + | chr2.3:52984556-52984575 | None:intergenic | 40.0% |
! | ACTTTTCATCGGTATGATGC+TGG | + | chr2.3:52980677-52980696 | None:intergenic | 40.0% |
! | ATGGTACAGATAGAGTTGGT+TGG | - | chr2.3:52981237-52981256 | MS.gene000957:intron | 40.0% |
! | CAAGCCGGTTCATATCAATT+GGG | - | chr2.3:52982368-52982387 | MS.gene000957:intron | 40.0% |
! | CTTGATGACTGAAAAGGTTG+CGG | + | chr2.3:52982902-52982921 | None:intergenic | 40.0% |
! | CTTTGCATTGCTGTTACTAC+TGG | - | chr2.3:52983027-52983046 | MS.gene000957:CDS | 40.0% |
! | GACAACACTGCTGATGATTT+TGG | - | chr2.3:52983826-52983845 | MS.gene000957:CDS | 40.0% |
! | GTAAGTTTTTCCCTCGCATA+AGG | - | chr2.3:52983085-52983104 | MS.gene000957:intron | 40.0% |
! | GTGTTTTACCGTTCTATTCC+AGG | - | chr2.3:52981692-52981711 | MS.gene000957:CDS | 40.0% |
! | TATTAGTTTGGCACTGCCAT+TGG | - | chr2.3:52983855-52983874 | MS.gene000957:CDS | 40.0% |
!! | CAAAGTCTTGGTGTCGTTTA+TGG | - | chr2.3:52980090-52980109 | MS.gene000957:CDS | 40.0% |
!! | CACTGGCTTATCATTGATTG+TGG | - | chr2.3:52983895-52983914 | MS.gene000957:CDS | 40.0% |
!! | GCTGGTGTTGTTCATATACT+AGG | - | chr2.3:52984652-52984671 | MS.gene000957:intron | 40.0% |
!! | TCCTTATGGAGTTGATGATC+CGG | - | chr2.3:52980155-52980174 | MS.gene000957:CDS | 40.0% |
!! | TTGATATGAACCGGCTTGTA+CGG | + | chr2.3:52982366-52982385 | None:intergenic | 40.0% |
AAAAAGGAAGGGGTAAGTGG+AGG | - | chr2.3:52980375-52980394 | MS.gene000957:CDS | 45.0% | |
AAAAGGAAGGGGTAAGTGGA+GGG | - | chr2.3:52980376-52980395 | MS.gene000957:CDS | 45.0% | |
AATACTCCGGCAATTGCAAG+GGG | + | chr2.3:52983974-52983993 | None:intergenic | 45.0% | |
ACACAACAACGAGGATCCAA+TGG | + | chr2.3:52983874-52983893 | None:intergenic | 45.0% | |
AGAGCAAACGACAATGGTCA+AGG | - | chr2.3:52980258-52980277 | MS.gene000957:CDS | 45.0% | |
AGAGCTCCAATCACTTTCTC+CGG | + | chr2.3:52980177-52980196 | None:intergenic | 45.0% | |
AGATACCGATACACGTAGAG+AGG | + | chr2.3:52981362-52981381 | None:intergenic | 45.0% | |
AGGACTCGTTGACCAAATCA+CGG | - | chr2.3:52983334-52983353 | MS.gene000957:CDS | 45.0% | |
ATACACGTAGAGAGGCGAAA+AGG | + | chr2.3:52981354-52981373 | None:intergenic | 45.0% | |
ATCCTCGTTGTTGTGTTCAC+TGG | - | chr2.3:52983878-52983897 | MS.gene000957:CDS | 45.0% | |
ATTCTTGCCCCAGCTATATC+TGG | - | chr2.3:52980837-52980856 | MS.gene000957:intron | 45.0% | |
CAACTACTCCTGTAACACCA+AGG | + | chr2.3:52981169-52981188 | None:intergenic | 45.0% | |
CAAGCTTACATCTATGGAGC+AGG | - | chr2.3:52980591-52980610 | MS.gene000957:CDS | 45.0% | |
CGACTGGCATATCAAAGTCT+TGG | - | chr2.3:52980078-52980097 | MS.gene000957:CDS | 45.0% | |
CTCAGTACGGTGACTATTAG+AGG | + | chr2.3:52984596-52984615 | None:intergenic | 45.0% | |
CTCTAATAGTCACCGTACTG+AGG | - | chr2.3:52984594-52984613 | MS.gene000957:intron | 45.0% | |
CTGCAGTGCCTTTCATTACA+AGG | + | chr2.3:52983787-52983806 | None:intergenic | 45.0% | |
CTGCTCCATAGATGTAAGCT+TGG | + | chr2.3:52980593-52980612 | None:intergenic | 45.0% | |
CTGGAATATATATCTGGCCG+AGG | + | chr2.3:52982984-52983003 | None:intergenic | 45.0% | |
GAAACGGACACATAGATGGT+TGG | - | chr2.3:52981384-52981403 | MS.gene000957:intron | 45.0% | |
GAAATACTCCGGCAATTGCA+AGG | + | chr2.3:52983976-52983995 | None:intergenic | 45.0% | |
GACTAAATCCTACCGAGTGT+TGG | + | chr2.3:52982284-52982303 | None:intergenic | 45.0% | |
GATGATCCGGAGAAAGTGAT+TGG | - | chr2.3:52980168-52980187 | MS.gene000957:CDS | 45.0% | |
GCACCCAATTGATATGCTTG+CGG | + | chr2.3:52982728-52982747 | None:intergenic | 45.0% | |
GCTAAGCAAGATTCCACCAA+GGG | + | chr2.3:52981414-52981433 | None:intergenic | 45.0% | |
GGAATCCTATCTATCCGATG+TGG | + | chr2.3:52982307-52982326 | None:intergenic | 45.0% | |
GGTAGGATTTAGTCCCACAT+CGG | - | chr2.3:52982290-52982309 | MS.gene000957:intron | 45.0% | |
GTCTCAATGGCATGGATTCT+CGG | - | chr2.3:52984061-52984080 | MS.gene000957:intron | 45.0% | |
GTGCCACACAACGAAAAATG+TGG | + | chr2.3:52984300-52984319 | None:intergenic | 45.0% | |
TAGTCCCACATCGGATAGAT+AGG | - | chr2.3:52982299-52982318 | MS.gene000957:intron | 45.0% | |
TCCGGATCATCAACTCCATA+AGG | + | chr2.3:52980159-52980178 | None:intergenic | 45.0% | |
TCTCAATGGCATGGATTCTC+GGG | - | chr2.3:52984062-52984081 | MS.gene000957:intron | 45.0% | |
TGAAAAGGTTGCGGTGATTG+TGG | + | chr2.3:52982893-52982912 | None:intergenic | 45.0% | |
TGCAGTTGTGTTAGTCATGC+TGG | - | chr2.3:52983802-52983821 | MS.gene000957:CDS | 45.0% | |
TGCTAAGCAAGATTCCACCA+AGG | + | chr2.3:52981415-52981434 | None:intergenic | 45.0% | |
TGGGAAACATCCATGAGCAA+GGG | + | chr2.3:52982929-52982948 | None:intergenic | 45.0% | |
TGTTACAGGAGTAGTTGTGC+TGG | - | chr2.3:52981172-52981191 | MS.gene000957:intron | 45.0% | |
TTCATCGGTATGATGCTGGT+TGG | + | chr2.3:52980673-52980692 | None:intergenic | 45.0% | |
TTGCAAGCTCTGTGTAGACT+AGG | + | chr2.3:52984129-52984148 | None:intergenic | 45.0% | |
TTGGGAAACATCCATGAGCA+AGG | + | chr2.3:52982930-52982949 | None:intergenic | 45.0% | |
TTGGTCCAATACGCTTGACA+AGG | + | chr2.3:52984270-52984289 | None:intergenic | 45.0% | |
TTTCCTGCTTCTGCATCCAT+TGG | + | chr2.3:52979841-52979860 | None:intergenic | 45.0% | |
TTTCGCCTCTCTACGTGTAT+CGG | - | chr2.3:52981354-52981373 | MS.gene000957:intron | 45.0% | |
TTTCGTTGTGTGGCACGATA+TGG | - | chr2.3:52984304-52984323 | MS.gene000957:intron | 45.0% | |
! | AGTCCCCGATTTTCGTTTCA+TGG | - | chr2.3:52982163-52982182 | MS.gene000957:intron | 45.0% |
! | GGCTTGCTTGATGACTGAAA+AGG | + | chr2.3:52982908-52982927 | None:intergenic | 45.0% |
! | GTCAATGATGGAAGGTTGCT+CGG | - | chr2.3:52984405-52984424 | MS.gene000957:CDS | 45.0% |
! | TCATCGGTATGATGCTGGTT+GGG | + | chr2.3:52980672-52980691 | None:intergenic | 45.0% |
! | TCTCTCGATTGTTCGGTTTG+CGG | + | chr2.3:52984454-52984473 | None:intergenic | 45.0% |
! | TGTTCGACTCGAGTCAATGA+TGG | - | chr2.3:52984393-52984412 | MS.gene000957:CDS | 45.0% |
!! | ACACGGACTAGTCCTAAACT+GGG | + | chr2.3:52984094-52984113 | None:intergenic | 45.0% |
!! | ATAGATGGTTGGCTTTCCCT+TGG | - | chr2.3:52981395-52981414 | MS.gene000957:intron | 45.0% |
!! | CCTTACAAAACCGGCTTGTA+CGG | + | chr2.3:52982136-52982155 | None:intergenic | 45.0% |
!! | GGTGTCGTTTATGGAGATCT+GGG | - | chr2.3:52980099-52980118 | MS.gene000957:CDS | 45.0% |
!! | TGGTGTCGTTTATGGAGATC+TGG | - | chr2.3:52980098-52980117 | MS.gene000957:CDS | 45.0% |
!!! | GTAGTTTTATCTGCTGCTGG+TGG | - | chr2.3:52980993-52981012 | MS.gene000957:intron | 45.0% |
!!! | TTTTTCCGCCTTGGTGTTAC+AGG | - | chr2.3:52981158-52981177 | MS.gene000957:intron | 45.0% |
!! | AAGAAATAAATTTATTATAA+GGG | - | chr2.3:52983143-52983162 | MS.gene000957:intron | 5.0% |
!! | TAAGAAATAAATTTATTATA+AGG | - | chr2.3:52983142-52983161 | MS.gene000957:intron | 5.0% |
!!! | TTAAAATGTAATTATTTTAT+CGG | + | chr2.3:52981856-52981875 | None:intergenic | 5.0% |
AAGCCTATCGGGTCTATCGT+TGG | - | chr2.3:52982191-52982210 | MS.gene000957:intron | 50.0% | |
ACAACAACGGAATGGATCGC+TGG | + | chr2.3:52984193-52984212 | None:intergenic | 50.0% | |
ACAAGGAACCGCTCTTCTTC+TGG | + | chr2.3:52984253-52984272 | None:intergenic | 50.0% | |
ACACAGTCCCAGAAGAAGAG+CGG | - | chr2.3:52984242-52984261 | MS.gene000957:intron | 50.0% | |
ACCATCTCCAATCACCATGC+AGG | + | chr2.3:52980817-52980836 | None:intergenic | 50.0% | |
ACCTGCATGGTGATTGGAGA+TGG | - | chr2.3:52980813-52980832 | MS.gene000957:intron | 50.0% | |
ACTCTTCAGCCCAGTCCAAT+GGG | + | chr2.3:52982243-52982262 | None:intergenic | 50.0% | |
AGCCAGTGAACACAACAACG+AGG | + | chr2.3:52983883-52983902 | None:intergenic | 50.0% | |
AGCCTATCGGGTCTATCGTT+GGG | - | chr2.3:52982192-52982211 | MS.gene000957:intron | 50.0% | |
ATCAAGCAAGCCCTTGCTCA+TGG | - | chr2.3:52982916-52982935 | MS.gene000957:CDS | 50.0% | |
ATGGCTCACAACCTTATGCG+AGG | + | chr2.3:52983099-52983118 | None:intergenic | 50.0% | |
ATTTGCATGTCGGCAGAGCA+AGG | + | chr2.3:52980637-52980656 | None:intergenic | 50.0% | |
CAAGGAACCGCTCTTCTTCT+GGG | + | chr2.3:52984252-52984271 | None:intergenic | 50.0% | |
CGGTTCCTTGTCAAGCGTAT+TGG | - | chr2.3:52984262-52984281 | MS.gene000957:intron | 50.0% | |
CTACTCCTGTAACACCAAGG+CGG | + | chr2.3:52981166-52981185 | None:intergenic | 50.0% | |
GATGGAAGGTTGCTCGGATT+CGG | - | chr2.3:52984411-52984430 | MS.gene000957:CDS | 50.0% | |
GCTTACATCTATGGAGCAGG+TGG | - | chr2.3:52980594-52980613 | MS.gene000957:CDS | 50.0% | |
GGACTCGTTGACCAAATCAC+GGG | - | chr2.3:52983335-52983354 | MS.gene000957:CDS | 50.0% | |
GTCTACACAGAGCTTGCAAG+TGG | - | chr2.3:52984130-52984149 | MS.gene000957:intron | 50.0% | |
GTGTGTTAGCAGCCAACACT+CGG | - | chr2.3:52982269-52982288 | MS.gene000957:intron | 50.0% | |
GTTAGCATCCAACACTCGGT+GGG | - | chr2.3:52982046-52982065 | MS.gene000957:intron | 50.0% | |
GTTGGTACCTGCATGGTGAT+TGG | - | chr2.3:52980807-52980826 | MS.gene000957:intron | 50.0% | |
TCACCATGCAGGTACCAACA+AGG | + | chr2.3:52980806-52980825 | None:intergenic | 50.0% | |
TGGCTCACAACCTTATGCGA+GGG | + | chr2.3:52983098-52983117 | None:intergenic | 50.0% | |
TGTCCTTGTTGGTACCTGCA+TGG | - | chr2.3:52980800-52980819 | MS.gene000957:intron | 50.0% | |
TGTTAGCATCCAACACTCGG+TGG | - | chr2.3:52982045-52982064 | MS.gene000957:intron | 50.0% | |
TTCTGGACAGGCTGCATATC+TGG | - | chr2.3:52981643-52981662 | MS.gene000957:CDS | 50.0% | |
! | CGACTCGAGTCAATGATGGA+AGG | - | chr2.3:52984397-52984416 | MS.gene000957:CDS | 50.0% |
! | TGTAGACTAGGCCGATTCCA+GGG | + | chr2.3:52984117-52984136 | None:intergenic | 50.0% |
! | TGTTCGGTTTGCGGTTCACA+TGG | + | chr2.3:52984445-52984464 | None:intergenic | 50.0% |
!! | AGCATACCGCTATCGACTTC+AGG | + | chr2.3:52981035-52981054 | None:intergenic | 50.0% |
!! | CCGTACAAGCCGGTTTTGTA+AGG | - | chr2.3:52982133-52982152 | MS.gene000957:intron | 50.0% |
!! | GACACGGACTAGTCCTAAAC+TGG | + | chr2.3:52984095-52984114 | None:intergenic | 50.0% |
!! | TCTTCTGGGACTGTGTAGAC+AGG | + | chr2.3:52984238-52984257 | None:intergenic | 50.0% |
AGCCCAACGATAGACCCGAT+AGG | + | chr2.3:52982197-52982216 | None:intergenic | 55.0% | |
AGGTTGCGGTGATTGTGGCT+TGG | + | chr2.3:52982888-52982907 | None:intergenic | 55.0% | |
ATCTGCTGCTGGTGGCATCA+AGG | - | chr2.3:52981001-52981020 | MS.gene000957:intron | 55.0% | |
ATGGCATGGATTCTCGGGCT+CGG | - | chr2.3:52984067-52984086 | MS.gene000957:intron | 55.0% | |
CAACGGAATGGATCGCTGGT+AGG | + | chr2.3:52984189-52984208 | None:intergenic | 55.0% | |
CACTCTTCAGCCCAGTCCAA+TGG | + | chr2.3:52982244-52982263 | None:intergenic | 55.0% | |
CAGCCAATGGATGCAGAAGC+AGG | - | chr2.3:52979835-52979854 | MS.gene000957:CDS | 55.0% | |
CTAGTCCGTGTCCCTGGAAT+CGG | - | chr2.3:52984103-52984122 | MS.gene000957:intron | 55.0% | |
CTATGGAGCAGGTGGAACAC+TGG | - | chr2.3:52980602-52980621 | MS.gene000957:CDS | 55.0% | |
CTGCTTCTGCATCCATTGGC+TGG | + | chr2.3:52979837-52979856 | None:intergenic | 55.0% | |
GCACTTCTCACCGTACAAGC+CGG | - | chr2.3:52982123-52982142 | MS.gene000957:intron | 55.0% | |
GGCTAAATCCCACCGAGTGT+TGG | + | chr2.3:52982057-52982076 | None:intergenic | 55.0% | |
GTTAGCAGCCAACACTCGGT+AGG | - | chr2.3:52982273-52982292 | MS.gene000957:intron | 55.0% | |
! | GTGTAGACTAGGCCGATTCC+AGG | + | chr2.3:52984118-52984137 | None:intergenic | 55.0% |
! | TGCGCTGTTGCTTCTACGAC+TGG | - | chr2.3:52980062-52980081 | MS.gene000957:CDS | 55.0% |
! | TGGACTGGGCTGAAGAGTGA+GGG | - | chr2.3:52982245-52982264 | MS.gene000957:intron | 55.0% |
! | TTGGACTGGGCTGAAGAGTG+AGG | - | chr2.3:52982244-52982263 | MS.gene000957:intron | 55.0% |
!! | ATGAACCGGCTTGTACGGTG+AGG | + | chr2.3:52982361-52982380 | None:intergenic | 55.0% |
!! | GATGGTTGGCTTTCCCTTGG+TGG | - | chr2.3:52981398-52981417 | MS.gene000957:intron | 55.0% |
!! | TTAGGACTAGTCCGTGTCCC+TGG | - | chr2.3:52984097-52984116 | MS.gene000957:intron | 55.0% |
ACGCTTCAGGCCCATTGGAC+TGG | - | chr2.3:52982230-52982249 | MS.gene000957:intron | 60.0% | |
AGTCCAATGGGCCTGAAGCG+TGG | + | chr2.3:52982231-52982250 | None:intergenic | 60.0% | |
CGCTTCAGGCCCATTGGACT+GGG | - | chr2.3:52982231-52982250 | MS.gene000957:intron | 60.0% | |
GACTGGGCTGAAGAGTGAGG+GGG | - | chr2.3:52982247-52982266 | MS.gene000957:intron | 60.0% | |
GCACTCCTCACCGTACAAGC+CGG | - | chr2.3:52982353-52982372 | MS.gene000957:intron | 60.0% | |
GGACTGGGCTGAAGAGTGAG+GGG | - | chr2.3:52982246-52982265 | MS.gene000957:intron | 60.0% | |
GGGGTAAGTGGAGGGCTTTG+AGG | - | chr2.3:52980384-52980403 | MS.gene000957:CDS | 60.0% | |
TCCTGCATCGTCCACGCTTC+AGG | - | chr2.3:52982217-52982236 | MS.gene000957:intron | 60.0% | |
TGGGCACCCCTTGCAATTGC+CGG | - | chr2.3:52983965-52983984 | MS.gene000957:intron | 60.0% | |
! | CTAGGCCGATTCCAGGGACA+CGG | + | chr2.3:52984111-52984130 | None:intergenic | 60.0% |
CGTCCACGCTTCAGGCCCAT+TGG | - | chr2.3:52982225-52982244 | MS.gene000957:intron | 65.0% | |
GCCTGAAGCGTGGACGATGC+AGG | + | chr2.3:52982221-52982240 | None:intergenic | 65.0% | |
! | CTCGGGCTCGGTCCCAGTTT+AGG | - | chr2.3:52984079-52984098 | MS.gene000957:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 52979760 | 52984834 | 52979760 | ID=MS.gene000957 |
chr2.3 | mRNA | 52979760 | 52984834 | 52979760 | ID=MS.gene000957.t1;Parent=MS.gene000957 |
chr2.3 | exon | 52984709 | 52984834 | 52984709 | ID=MS.gene000957.t1.exon1;Parent=MS.gene000957.t1 |
chr2.3 | CDS | 52984709 | 52984834 | 52984709 | ID=cds.MS.gene000957.t1;Parent=MS.gene000957.t1 |
chr2.3 | exon | 52984315 | 52984540 | 52984315 | ID=MS.gene000957.t1.exon2;Parent=MS.gene000957.t1 |
chr2.3 | CDS | 52984315 | 52984540 | 52984315 | ID=cds.MS.gene000957.t1;Parent=MS.gene000957.t1 |
chr2.3 | exon | 52983736 | 52983981 | 52983736 | ID=MS.gene000957.t1.exon3;Parent=MS.gene000957.t1 |
chr2.3 | CDS | 52983736 | 52983981 | 52983736 | ID=cds.MS.gene000957.t1;Parent=MS.gene000957.t1 |
chr2.3 | exon | 52983547 | 52983597 | 52983547 | ID=MS.gene000957.t1.exon4;Parent=MS.gene000957.t1 |
chr2.3 | CDS | 52983547 | 52983597 | 52983547 | ID=cds.MS.gene000957.t1;Parent=MS.gene000957.t1 |
chr2.3 | exon | 52983154 | 52983414 | 52983154 | ID=MS.gene000957.t1.exon5;Parent=MS.gene000957.t1 |
chr2.3 | CDS | 52983154 | 52983414 | 52983154 | ID=cds.MS.gene000957.t1;Parent=MS.gene000957.t1 |
chr2.3 | exon | 52982881 | 52983048 | 52982881 | ID=MS.gene000957.t1.exon6;Parent=MS.gene000957.t1 |
chr2.3 | CDS | 52982881 | 52983048 | 52982881 | ID=cds.MS.gene000957.t1;Parent=MS.gene000957.t1 |
chr2.3 | exon | 52981510 | 52981764 | 52981510 | ID=MS.gene000957.t1.exon7;Parent=MS.gene000957.t1 |
chr2.3 | CDS | 52981510 | 52981764 | 52981510 | ID=cds.MS.gene000957.t1;Parent=MS.gene000957.t1 |
chr2.3 | exon | 52979760 | 52980796 | 52979760 | ID=MS.gene000957.t1.exon8;Parent=MS.gene000957.t1 |
chr2.3 | CDS | 52979760 | 52980796 | 52979760 | ID=cds.MS.gene000957.t1;Parent=MS.gene000957.t1 |
Gene Sequence |
Protein sequence |