Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36506.t1 | XP_013457360.1 | 98.9 | 788 | 8 | 1 | 1 | 788 | 1 | 787 | 0.00E+00 | 1532.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36506.t1 | Q9SA05 | 74.2 | 799 | 192 | 4 | 1 | 788 | 1 | 796 | 0.0e+00 | 1178.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36506.t1 | A0A072UPX3 | 98.9 | 788 | 8 | 1 | 1 | 788 | 1 | 787 | 0.0e+00 | 1532.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049356 | MS.gene36506 | 0.849594 | 2.92E-60 | -1.69E-46 |
| MS.gene049369 | MS.gene36506 | 0.876831 | 1.02E-68 | -1.69E-46 |
| MS.gene049396 | MS.gene36506 | 0.802702 | 4.95E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene36506 | 0.825529 | 4.46E-54 | -1.69E-46 |
| MS.gene049491 | MS.gene36506 | 0.822313 | 2.53E-53 | -1.69E-46 |
| MS.gene049661 | MS.gene36506 | 0.808738 | 2.67E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene36506 | 0.816232 | 6.15E-52 | -1.69E-46 |
| MS.gene049907 | MS.gene36506 | 0.80372 | 3.05E-49 | -1.69E-46 |
| MS.gene050397 | MS.gene36506 | 0.801287 | 9.67E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene36506 | 0.807144 | 5.83E-50 | -1.69E-46 |
| MS.gene050499 | MS.gene36506 | 0.816302 | 5.93E-52 | -1.69E-46 |
| MS.gene050593 | MS.gene36506 | 0.803548 | 3.31E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene36506 | 0.802476 | 5.51E-49 | -1.69E-46 |
| MS.gene050971 | MS.gene36506 | 0.828895 | 6.97E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene36506 | 0.814712 | 1.34E-51 | -1.69E-46 |
| MS.gene051255 | MS.gene36506 | 0.826118 | 3.23E-54 | -1.69E-46 |
| MS.gene051360 | MS.gene36506 | 0.847952 | 8.35E-60 | -1.69E-46 |
| MS.gene051387 | MS.gene36506 | 0.805727 | 1.16E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene36506 | 0.856852 | 2.43E-62 | -1.69E-46 |
| MS.gene051858 | MS.gene36506 | 0.804508 | 2.09E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene36506 | 0.828145 | 1.06E-54 | -1.69E-46 |
| MS.gene052253 | MS.gene36506 | 0.814553 | 1.45E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene36506 | 0.800725 | 1.26E-48 | -1.69E-46 |
| MS.gene052322 | MS.gene36506 | 0.805917 | 1.06E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene36506 | 0.82465 | 7.19E-54 | -1.69E-46 |
| MS.gene052414 | MS.gene36506 | 0.817383 | 3.39E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene36506 | 0.828964 | 6.71E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene36506 | 0.851635 | 7.81E-61 | -1.69E-46 |
| MS.gene052485 | MS.gene36506 | 0.842429 | 2.60E-58 | -1.69E-46 |
| MS.gene052632 | MS.gene36506 | 0.806648 | 7.43E-50 | -1.69E-46 |
| MS.gene053103 | MS.gene36506 | 0.800338 | 1.51E-48 | -1.69E-46 |
| MS.gene053104 | MS.gene36506 | 0.813466 | 2.52E-51 | -1.69E-46 |
| MS.gene05316 | MS.gene36506 | 0.804908 | 1.72E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene36506 | 0.827274 | 1.71E-54 | -1.69E-46 |
| MS.gene053449 | MS.gene36506 | 0.870152 | 1.81E-66 | -1.69E-46 |
| MS.gene053758 | MS.gene36506 | 0.839908 | 1.20E-57 | -1.69E-46 |
| MS.gene053813 | MS.gene36506 | 0.839845 | 1.24E-57 | -1.69E-46 |
| MS.gene053912 | MS.gene36506 | 0.832502 | 9.11E-56 | -1.69E-46 |
| MS.gene05505 | MS.gene36506 | 0.817946 | 2.53E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene36506 | 0.806535 | 7.85E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene36506 | 0.810699 | 1.01E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene36506 | 0.81186 | 5.67E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene36506 | 0.839568 | 1.47E-57 | -1.69E-46 |
| MS.gene055909 | MS.gene36506 | 0.810337 | 1.21E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene36506 | 0.81166 | 6.26E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene36506 | 0.818203 | 2.22E-52 | -1.69E-46 |
| MS.gene056191 | MS.gene36506 | 0.819511 | 1.12E-52 | -1.69E-46 |
| MS.gene056410 | MS.gene36506 | 0.833224 | 6.03E-56 | -1.69E-46 |
| MS.gene056422 | MS.gene36506 | 0.842707 | 2.19E-58 | -1.69E-46 |
| MS.gene056448 | MS.gene36506 | 0.800139 | 1.66E-48 | -1.69E-46 |
| MS.gene056511 | MS.gene36506 | 0.842996 | 1.84E-58 | -1.69E-46 |
| MS.gene056549 | MS.gene36506 | 0.801814 | 7.54E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene36506 | 0.842631 | 2.30E-58 | -1.69E-46 |
| MS.gene056611 | MS.gene36506 | 0.812374 | 4.38E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene36506 | 0.809539 | 1.80E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene36506 | 0.809589 | 1.76E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene36506 | 0.813867 | 2.06E-51 | -1.69E-46 |
| MS.gene057146 | MS.gene36506 | 0.810995 | 8.73E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene36506 | 0.814172 | 1.76E-51 | -1.69E-46 |
| MS.gene057448 | MS.gene36506 | 0.814337 | 1.62E-51 | -1.69E-46 |
| MS.gene057449 | MS.gene36506 | 0.826854 | 2.16E-54 | -1.69E-46 |
| MS.gene057450 | MS.gene36506 | 0.815727 | 7.97E-52 | -1.69E-46 |
| MS.gene057537 | MS.gene36506 | 0.838978 | 2.08E-57 | -1.69E-46 |
| MS.gene057734 | MS.gene36506 | 0.813844 | 2.08E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene36506 | 0.811784 | 5.89E-51 | -1.69E-46 |
| MS.gene057823 | MS.gene36506 | 0.811257 | 7.67E-51 | -1.69E-46 |
| MS.gene057856 | MS.gene36506 | 0.802817 | 4.69E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene36506 | 0.826577 | 2.51E-54 | -1.69E-46 |
| MS.gene058007 | MS.gene36506 | 0.802016 | 6.85E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene36506 | 0.806533 | 7.85E-50 | -1.69E-46 |
| MS.gene05842 | MS.gene36506 | 0.823595 | 1.27E-53 | -1.69E-46 |
| MS.gene058459 | MS.gene36506 | 0.806074 | 9.81E-50 | -1.69E-46 |
| MS.gene058588 | MS.gene36506 | 0.804324 | 2.28E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene36506 | 0.820929 | 5.29E-53 | -1.69E-46 |
| MS.gene058790 | MS.gene36506 | 0.805157 | 1.53E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene36506 | 0.860931 | 1.46E-63 | -1.69E-46 |
| MS.gene058948 | MS.gene36506 | 0.801476 | 8.85E-49 | -1.69E-46 |
| MS.gene058995 | MS.gene36506 | 0.805896 | 1.07E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene36506 | 0.827164 | 1.82E-54 | -1.69E-46 |
| MS.gene059294 | MS.gene36506 | 0.827084 | 1.90E-54 | -1.69E-46 |
| MS.gene059305 | MS.gene36506 | 0.803057 | 4.18E-49 | -1.69E-46 |
| MS.gene059366 | MS.gene36506 | 0.846293 | 2.38E-59 | -1.69E-46 |
| MS.gene059368 | MS.gene36506 | 0.811026 | 8.60E-51 | -1.69E-46 |
| MS.gene059455 | MS.gene36506 | 0.821461 | 3.99E-53 | -1.69E-46 |
| MS.gene059536 | MS.gene36506 | 0.829926 | 3.92E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene36506 | 0.811396 | 7.15E-51 | -1.69E-46 |
| MS.gene059674 | MS.gene36506 | 0.842098 | 3.18E-58 | -1.69E-46 |
| MS.gene059676 | MS.gene36506 | 0.825124 | 5.56E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene36506 | 0.834236 | 3.37E-56 | -1.69E-46 |
| MS.gene059692 | MS.gene36506 | 0.8263 | 2.93E-54 | -1.69E-46 |
| MS.gene059695 | MS.gene36506 | 0.819411 | 1.18E-52 | -1.69E-46 |
| MS.gene059711 | MS.gene36506 | 0.856802 | 2.51E-62 | -1.69E-46 |
| MS.gene059807 | MS.gene36506 | 0.830982 | 2.16E-55 | -1.69E-46 |
| MS.gene05986 | MS.gene36506 | 0.816565 | 5.18E-52 | -1.69E-46 |
| MS.gene059974 | MS.gene36506 | 0.828413 | 9.12E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene36506 | 0.810834 | 9.47E-51 | -1.69E-46 |
| MS.gene060482 | MS.gene36506 | 0.803472 | 3.43E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene36506 | 0.843054 | 1.77E-58 | -1.69E-46 |
| MS.gene060818 | MS.gene36506 | 0.886488 | 3.28E-72 | -1.69E-46 |
| MS.gene060835 | MS.gene36506 | 0.809206 | 2.12E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene36506 | 0.887571 | 1.27E-72 | -1.69E-46 |
| MS.gene061041 | MS.gene36506 | 0.825052 | 5.78E-54 | -1.69E-46 |
| MS.gene061051 | MS.gene36506 | -0.831932 | 1.26E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene36506 | 0.807712 | 4.42E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene036959 | MS.gene36506 | PPI |
| MS.gene000958 | MS.gene36506 | PPI |
| MS.gene57440 | MS.gene36506 | PPI |
| MS.gene36506 | MS.gene000957 | PPI |
| MS.gene023187 | MS.gene36506 | PPI |
| MS.gene35174 | MS.gene36506 | PPI |
| MS.gene000957 | MS.gene36506 | PPI |
| MS.gene036960 | MS.gene36506 | PPI |
| MS.gene073487 | MS.gene36506 | PPI |
| MS.gene028285 | MS.gene36506 | PPI |
| MS.gene036961 | MS.gene36506 | PPI |
| MS.gene57439 | MS.gene36506 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36506.t1 | MTR_4g094660 | 99.365 | 788 | 4 | 1 | 1 | 788 | 1 | 787 | 0.0 | 1607 |
| MS.gene36506.t1 | MTR_2g438150 | 81.337 | 793 | 139 | 5 | 1 | 788 | 1 | 789 | 0.0 | 1303 |
| MS.gene36506.t1 | MTR_2g438150 | 81.084 | 793 | 141 | 5 | 1 | 788 | 1 | 789 | 0.0 | 1299 |
| MS.gene36506.t1 | MTR_4g094660 | 99.169 | 602 | 4 | 1 | 187 | 788 | 1 | 601 | 0.0 | 1218 |
| MS.gene36506.t1 | MTR_2g438160 | 82.229 | 619 | 110 | 0 | 1 | 619 | 1 | 619 | 0.0 | 1018 |
| MS.gene36506.t1 | MTR_6g033165 | 48.758 | 765 | 362 | 4 | 50 | 788 | 59 | 819 | 0.0 | 741 |
| MS.gene36506.t1 | MTR_5g034500 | 46.717 | 792 | 381 | 11 | 28 | 788 | 1 | 782 | 0.0 | 711 |
| MS.gene36506.t1 | MTR_5g071860 | 46.286 | 754 | 381 | 7 | 42 | 788 | 18 | 754 | 0.0 | 707 |
| MS.gene36506.t1 | MTR_6g007697 | 45.362 | 787 | 393 | 10 | 28 | 788 | 1 | 776 | 0.0 | 696 |
| MS.gene36506.t1 | MTR_7g108480 | 44.386 | 766 | 390 | 5 | 23 | 786 | 40 | 771 | 0.0 | 689 |
| MS.gene36506.t1 | MTR_3g094090 | 46.375 | 800 | 384 | 12 | 28 | 788 | 1 | 794 | 0.0 | 688 |
| MS.gene36506.t1 | MTR_8g063840 | 46.488 | 783 | 386 | 10 | 26 | 788 | 71 | 840 | 0.0 | 684 |
| MS.gene36506.t1 | MTR_4g099260 | 45.761 | 802 | 396 | 12 | 12 | 788 | 28 | 815 | 0.0 | 673 |
| MS.gene36506.t1 | MTR_2g008820 | 45.256 | 780 | 404 | 9 | 22 | 788 | 80 | 849 | 0.0 | 669 |
| MS.gene36506.t1 | MTR_8g063900 | 42.802 | 771 | 373 | 5 | 22 | 786 | 35 | 743 | 0.0 | 654 |
| MS.gene36506.t1 | MTR_5g071630 | 44.177 | 747 | 379 | 10 | 49 | 788 | 10 | 725 | 0.0 | 644 |
| MS.gene36506.t1 | MTR_5g070670 | 44.887 | 753 | 393 | 8 | 52 | 788 | 103 | 849 | 0.0 | 640 |
| MS.gene36506.t1 | MTR_8g099090 | 44.231 | 780 | 398 | 8 | 41 | 788 | 18 | 792 | 0.0 | 637 |
| MS.gene36506.t1 | MTR_5g071827 | 45.388 | 683 | 352 | 6 | 110 | 788 | 1 | 666 | 0.0 | 635 |
| MS.gene36506.t1 | MTR_8g088200 | 42.803 | 792 | 419 | 9 | 18 | 788 | 4 | 782 | 0.0 | 629 |
| MS.gene36506.t1 | MTR_8g022130 | 42.038 | 785 | 413 | 10 | 9 | 788 | 19 | 766 | 0.0 | 620 |
| MS.gene36506.t1 | MTR_8g107510 | 38.889 | 774 | 438 | 13 | 40 | 785 | 13 | 779 | 9.54e-179 | 532 |
| MS.gene36506.t1 | MTR_3g094090 | 44.942 | 603 | 296 | 7 | 219 | 788 | 10 | 609 | 8.23e-172 | 508 |
| MS.gene36506.t1 | MTR_5g034590 | 49.123 | 171 | 87 | 0 | 447 | 617 | 89 | 259 | 4.41e-54 | 191 |
| MS.gene36506.t1 | MTR_5g034590 | 44.186 | 86 | 43 | 1 | 109 | 189 | 5 | 90 | 3.50e-15 | 78.6 |
| MS.gene36506.t1 | MTR_8g022160 | 48.500 | 200 | 99 | 2 | 9 | 207 | 19 | 215 | 1.62e-51 | 181 |
| MS.gene36506.t1 | MTR_1g029310 | 39.683 | 126 | 69 | 2 | 197 | 322 | 12 | 130 | 2.29e-21 | 90.9 |
| MS.gene36506.t1 | MTR_2g438170 | 56.790 | 81 | 26 | 5 | 650 | 725 | 1 | 77 | 5.66e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36506.t1 | AT1G31120 | 76.214 | 803 | 169 | 7 | 1 | 788 | 1 | 796 | 0.0 | 1201 |
| MS.gene36506.t1 | AT2G35060 | 75.500 | 800 | 176 | 6 | 1 | 788 | 1 | 792 | 0.0 | 1197 |
| MS.gene36506.t1 | AT2G35060 | 75.500 | 800 | 176 | 6 | 1 | 788 | 1 | 792 | 0.0 | 1197 |
| MS.gene36506.t1 | AT2G35060 | 75.500 | 800 | 176 | 6 | 1 | 788 | 1 | 792 | 0.0 | 1197 |
| MS.gene36506.t1 | AT2G35060 | 75.406 | 801 | 176 | 7 | 1 | 788 | 1 | 793 | 0.0 | 1192 |
| MS.gene36506.t1 | AT4G19960 | 68.025 | 810 | 234 | 5 | 1 | 788 | 1 | 807 | 0.0 | 1062 |
| MS.gene36506.t1 | AT4G19960 | 66.707 | 826 | 234 | 6 | 1 | 788 | 1 | 823 | 0.0 | 1052 |
| MS.gene36506.t1 | AT4G19960 | 65.909 | 836 | 234 | 6 | 1 | 788 | 1 | 833 | 0.0 | 1048 |
| MS.gene36506.t1 | AT4G19960 | 67.402 | 589 | 175 | 3 | 214 | 788 | 1 | 586 | 0.0 | 780 |
| MS.gene36506.t1 | AT2G40540 | 47.296 | 795 | 384 | 9 | 28 | 788 | 1 | 794 | 0.0 | 704 |
| MS.gene36506.t1 | AT2G40540 | 47.296 | 795 | 384 | 9 | 28 | 788 | 1 | 794 | 0.0 | 704 |
| MS.gene36506.t1 | AT2G40540 | 47.296 | 795 | 384 | 9 | 28 | 788 | 1 | 794 | 0.0 | 704 |
| MS.gene36506.t1 | AT2G40540 | 47.296 | 795 | 384 | 9 | 28 | 788 | 1 | 794 | 0.0 | 704 |
| MS.gene36506.t1 | AT2G40540 | 47.296 | 795 | 384 | 9 | 28 | 788 | 1 | 794 | 0.0 | 704 |
| MS.gene36506.t1 | AT1G60160 | 46.490 | 755 | 388 | 6 | 42 | 788 | 81 | 827 | 0.0 | 698 |
| MS.gene36506.t1 | AT3G02050 | 47.155 | 791 | 385 | 6 | 27 | 788 | 3 | 789 | 0.0 | 698 |
| MS.gene36506.t1 | AT5G14880 | 47.804 | 774 | 372 | 10 | 42 | 788 | 13 | 781 | 0.0 | 691 |
| MS.gene36506.t1 | AT1G70300 | 45.420 | 786 | 400 | 8 | 28 | 788 | 1 | 782 | 0.0 | 683 |
| MS.gene36506.t1 | AT4G13420 | 44.192 | 792 | 418 | 5 | 4 | 786 | 7 | 783 | 0.0 | 678 |
| MS.gene36506.t1 | AT4G33530 | 45.241 | 809 | 408 | 10 | 4 | 788 | 58 | 855 | 0.0 | 669 |
| MS.gene36506.t1 | AT2G30070 | 51.320 | 606 | 292 | 1 | 42 | 644 | 18 | 623 | 0.0 | 657 |
| MS.gene36506.t1 | AT2G30070 | 38.961 | 77 | 47 | 0 | 712 | 788 | 636 | 712 | 1.07e-11 | 68.9 |
| MS.gene36506.t1 | AT5G09400 | 44.908 | 815 | 415 | 10 | 5 | 788 | 47 | 858 | 0.0 | 652 |
| MS.gene36506.t1 | AT4G23640 | 44.948 | 772 | 386 | 9 | 49 | 788 | 11 | 775 | 0.0 | 637 |
| MS.gene36506.t1 | AT4G33530 | 45.779 | 616 | 323 | 4 | 183 | 788 | 13 | 627 | 0.0 | 548 |
| MS.gene36506.t1 | AT2G30070 | 50.398 | 502 | 249 | 0 | 143 | 644 | 2 | 503 | 0.0 | 539 |
| MS.gene36506.t1 | AT2G30070 | 38.961 | 77 | 47 | 0 | 712 | 788 | 516 | 592 | 8.61e-12 | 68.9 |
Find 188 sgRNAs with CRISPR-Local
Find 329 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAGTCTTGGCGTGGTTTA+TGG | 0.144680 | 4.1:+18104019 | MS.gene36506:CDS |
| ATCGGCTGTTGGTGGGATTA+AGG | 0.255722 | 4.1:+18105296 | MS.gene36506:CDS |
| ACAAGGTATCTCTCTTCTTC+CGG | 0.262164 | 4.1:-18107483 | None:intergenic |
| GCTGGGGTGGTTCACATATT+AGG | 0.264983 | 4.1:+18107882 | MS.gene36506:CDS |
| ATTCTTATTCTTGTCCTTGC+TGG | 0.272064 | 4.1:+18105106 | MS.gene36506:CDS |
| ATTATATATATGCATTTCTT+AGG | 0.280181 | 4.1:+18107961 | MS.gene36506:CDS |
| TGTCGCCTGGCTTGCAACTA+TGG | 0.292518 | 4.1:-18106728 | None:intergenic |
| TTGCTCCAATTGTCCTCCTT+TGG | 0.298318 | 4.1:+18105554 | MS.gene36506:CDS |
| TCAGATGAATACAGTTTATA+TGG | 0.316978 | 4.1:+18107663 | MS.gene36506:CDS |
| CTCCTTTGGTTTCTCCTAAT+AGG | 0.317007 | 4.1:+18105568 | MS.gene36506:CDS |
| TTGCAGCAAATGACCTTTCA+TGG | 0.321779 | 4.1:-18105039 | None:intergenic |
| CTTTGCATTGCCGTCACGGC+AGG | 0.331474 | 4.1:+18106883 | MS.gene36506:CDS |
| CAAAGGTAGTATGTGGGATT+TGG | 0.334435 | 4.1:+18103633 | MS.gene36506:CDS |
| CTCGGGCTTGGCCCAAGTTT+AGG | 0.337026 | 4.1:+18107312 | MS.gene36506:CDS |
| CAAGGTATCTCTCTTCTTCC+GGG | 0.346404 | 4.1:-18107482 | None:intergenic |
| TACCATAAGCATTTCCAATC+TGG | 0.350786 | 4.1:-18106921 | None:intergenic |
| TGTCTGTGCCATAATGTTGC+AGG | 0.356956 | 4.1:-18105516 | None:intergenic |
| ATTCTTACCCCGGCTATATC+AGG | 0.357397 | 4.1:+18105154 | MS.gene36506:CDS |
| CGAAAGATGTGGTAATTCTT+AGG | 0.358981 | 4.1:-18107519 | None:intergenic |
| ATATTTAACATCTGTAAGTA+TGG | 0.359612 | 4.1:+18105601 | MS.gene36506:CDS |
| TATATAGTCCAGATATCAAT+TGG | 0.360279 | 4.1:+18106848 | MS.gene36506:CDS |
| ATATACCAATACCTCCTATT+AGG | 0.365604 | 4.1:-18105582 | None:intergenic |
| AACCAGATTGGAAATGCTTA+TGG | 0.368806 | 4.1:+18106919 | MS.gene36506:CDS |
| ATTATGTTTGTCTGGCATTA+CGG | 0.372759 | 4.1:+18107234 | MS.gene36506:CDS |
| TGATATCTGGACTATATATC+TGG | 0.373074 | 4.1:-18106843 | None:intergenic |
| GTCTCGATGGCATGGATTCT+CGG | 0.378294 | 4.1:+18107294 | MS.gene36506:CDS |
| TCATCGGTGCGATGCTGATT+GGG | 0.380293 | 4.1:-18104986 | None:intergenic |
| TTCATCGGTGCGATGCTGAT+TGG | 0.380303 | 4.1:-18104987 | None:intergenic |
| ATAAGGACCCAATTGATATC+TGG | 0.383547 | 4.1:-18106856 | None:intergenic |
| GGAACATACCATTACTCATA+TGG | 0.384347 | 4.1:-18105329 | None:intergenic |
| TGGGTTCCTCTTGTAATTGC+CGG | 0.384804 | 4.1:+18107198 | MS.gene36506:CDS |
| ATGGCATGGATTCTCGGGCT+TGG | 0.385857 | 4.1:+18107300 | MS.gene36506:CDS |
| GGTATCATGCTCAGTATAAC+AGG | 0.392216 | 4.1:+18105709 | MS.gene36506:CDS |
| TTAGGACTTGTTCGTGTACC+TGG | 0.405042 | 4.1:+18107330 | MS.gene36506:CDS |
| GATTATCTACTCTCTTACCT+TGG | 0.406143 | 4.1:+18104132 | MS.gene36506:CDS |
| TCTTCATCTTTCACACCGTT+CGG | 0.408337 | 4.1:-18104085 | None:intergenic |
| AATGAGTCAAGTTATTCATA+AGG | 0.411947 | 4.1:-18106256 | None:intergenic |
| ATTGCTGTTGTAATATTAGT+TGG | 0.412164 | 4.1:+18105484 | MS.gene36506:CDS |
| GTGTAGACTAGTCCGATTCC+AGG | 0.417435 | 4.1:-18107348 | None:intergenic |
| AAATAGTGATATATGTAAAC+AGG | 0.422030 | 4.1:-18105649 | None:intergenic |
| TTTCTCCTAATAGGAGGTAT+TGG | 0.422505 | 4.1:+18105577 | MS.gene36506:CDS |
| AGAAACCAAAGGAGGACAAT+TGG | 0.429550 | 4.1:-18105559 | None:intergenic |
| TCTTCCGGGACGGTGTAAAC+AGG | 0.434145 | 4.1:-18107468 | None:intergenic |
| ACTCTTCGTCTTTCTTGTGC+AGG | 0.434280 | 4.1:-18107569 | None:intergenic |
| GCTGGCACCTGCATGGTAAT+CGG | 0.439778 | 4.1:+18105124 | MS.gene36506:CDS |
| TTGAATAACTGCAGGGACGC+TGG | 0.441557 | 4.1:+18107864 | MS.gene36506:CDS |
| TCTCGATGGCATGGATTCTC+GGG | 0.451131 | 4.1:+18107295 | MS.gene36506:CDS |
| GTATATACAACTTTAACTCT+AGG | 0.455200 | 4.1:-18106802 | None:intergenic |
| CTTCCTGCCTCTTCCTCCAT+AGG | 0.455502 | 4.1:-18103673 | None:intergenic |
| GTGATAACAAAGGTAGTATG+TGG | 0.456986 | 4.1:+18103626 | MS.gene36506:CDS |
| GGCAGCCATAGTTGCAAGCC+AGG | 0.457567 | 4.1:+18106723 | MS.gene36506:CDS |
| CTAACAGTGATATTCACATT+TGG | 0.460145 | 4.1:-18107792 | None:intergenic |
| TTCGAAAATCAAAACCAGAT+TGG | 0.460880 | 4.1:+18106907 | MS.gene36506:CDS |
| GGCGTGGTTTATGGAGATTT+AGG | 0.461670 | 4.1:+18104028 | MS.gene36506:CDS |
| CAAATGTGAATATCACTGTT+AGG | 0.464701 | 4.1:+18107793 | MS.gene36506:CDS |
| TATTGGTGTGGCGCTGCCAC+TGG | 0.464822 | 4.1:+18107088 | MS.gene36506:CDS |
| ATATCATGATTAAAATCATA+AGG | 0.466363 | 4.1:-18107068 | None:intergenic |
| CTGCCTCTTCCTCCATAGGC+TGG | 0.471158 | 4.1:-18103669 | None:intergenic |
| TGAATAACTGCAGGGACGCT+GGG | 0.476846 | 4.1:+18107865 | MS.gene36506:CDS |
| TGACCAGCCTATGGAGGAAG+AGG | 0.478610 | 4.1:+18103666 | MS.gene36506:CDS |
| GAACATACCATTACTCATAT+GGG | 0.479647 | 4.1:-18105328 | None:intergenic |
| TCAAAGTTAATCAAGGTGGA+TGG | 0.480215 | 4.1:+18107178 | MS.gene36506:CDS |
| CTTGTTCGTGTACCTGGAAT+CGG | 0.484864 | 4.1:+18107336 | MS.gene36506:CDS |
| AGATACCTTGTAAAGAGGAT+TGG | 0.486463 | 4.1:+18107495 | MS.gene36506:CDS |
| TTTCGATGTGTGGCACGGTA+TGG | 0.488737 | 4.1:+18107537 | MS.gene36506:CDS |
| CGGCTTGCATATCAGAGTCT+TGG | 0.492350 | 4.1:+18104007 | MS.gene36506:CDS |
| CCCGTCTCCGATTACCATGC+AGG | 0.492534 | 4.1:-18105131 | None:intergenic |
| CATTTCTTAGGAAAATATGC+AGG | 0.492742 | 4.1:+18107973 | MS.gene36506:CDS |
| TGTACAGCTTGCATTTACTC+TGG | 0.493940 | 4.1:+18106187 | MS.gene36506:CDS |
| ATATGTTGTTAGTTCTTCAT+CGG | 0.496853 | 4.1:-18105002 | None:intergenic |
| ATATATGTAAACAGGAGAAA+AGG | 0.499936 | 4.1:-18105641 | None:intergenic |
| TCAGAAGCTTGACCAGCCTA+TGG | 0.501135 | 4.1:+18103657 | MS.gene36506:CDS |
| AAGAGAGATACCTTGTAAAG+AGG | 0.504738 | 4.1:+18107490 | MS.gene36506:CDS |
| TAGGTCCAATCCTCTTTACA+AGG | 0.508685 | 4.1:-18107500 | None:intergenic |
| GTAATCTTCAAAGTTAATCA+AGG | 0.509932 | 4.1:+18107171 | MS.gene36506:CDS |
| CACTTGCTTATCATTGATTG+TGG | 0.513008 | 4.1:+18107128 | MS.gene36506:CDS |
| ATGGCACAGACAAAGTTAGT+TGG | 0.513478 | 4.1:+18105527 | MS.gene36506:CDS |
| GGTTGGAGGAACGTGAATCA+TGG | 0.513701 | 4.1:+18105074 | MS.gene36506:CDS |
| CTTTGGTTTCTCCTAATAGG+AGG | 0.516527 | 4.1:+18105571 | MS.gene36506:CDS |
| AAAGATGAAGAGGAAGTACT+TGG | 0.516753 | 4.1:+18104097 | MS.gene36506:CDS |
| CAAGCTTAACAAACAGTGAA+AGG | 0.516927 | 4.1:-18107614 | None:intergenic |
| CAGCCTATGGAGGAAGAGGC+AGG | 0.517760 | 4.1:+18103670 | MS.gene36506:CDS |
| ACAGTGATATTCACATTTGG+CGG | 0.519018 | 4.1:-18107789 | None:intergenic |
| ACACGAACAAGTCCTAAACT+TGG | 0.520151 | 4.1:-18107324 | None:intergenic |
| CACAGTTGTGATGGCAAGGA+GGG | 0.523327 | 4.1:+18107908 | MS.gene36506:CDS |
| GTCGTTCTACCTTCCATGAA+AGG | 0.523441 | 4.1:+18105026 | MS.gene36506:CDS |
| TTTAGAAGAGGTGGAAAACA+AGG | 0.524364 | 4.1:+18105670 | MS.gene36506:CDS |
| ACCTGCATGGTAATCGGAGA+CGG | 0.529408 | 4.1:+18105130 | MS.gene36506:CDS |
| AAACAAGGATGGACTTCCCT+TGG | 0.530115 | 4.1:+18105685 | MS.gene36506:CDS |
| CAGTTTATATGGAGGACAGC+AGG | 0.530247 | 4.1:+18107674 | MS.gene36506:CDS |
| GTATGCAGCTTGTCCAGAAT+AGG | 0.531509 | 4.1:-18106234 | None:intergenic |
| ATGTTGCAGTTATTGTCGCC+TGG | 0.531764 | 4.1:-18106741 | None:intergenic |
| GATTCTTTGCATTGCCGTCA+CGG | 0.532435 | 4.1:+18106879 | MS.gene36506:CDS |
| CGGCAATGCAAAGAATCATA+AGG | 0.533751 | 4.1:-18106873 | None:intergenic |
| GCATATGTACCTGATATAGC+CGG | 0.535287 | 4.1:-18105163 | None:intergenic |
| CTGAGACCGGAAAATGAGAT+AGG | 0.535427 | 4.1:-18106163 | None:intergenic |
| GCTGTTGCAACAACAAATAC+CGG | 0.537816 | 4.1:-18106700 | None:intergenic |
| CAAAGTTAATCAAGGTGGAT+GGG | 0.539107 | 4.1:+18107179 | MS.gene36506:CDS |
| TGTTAAGCTTGAATCTATGA+TGG | 0.539727 | 4.1:+18107626 | MS.gene36506:CDS |
| ATTAAGCAAGCCCTTGCTCA+TGG | 0.540837 | 4.1:+18106772 | MS.gene36506:CDS |
| AGCAAGGACAAGAATAAGAA+TGG | 0.541082 | 4.1:-18105104 | None:intergenic |
| TGTCCTTGCTGGCACCTGCA+TGG | 0.541400 | 4.1:+18105117 | MS.gene36506:CDS |
| CATATGTACCTGATATAGCC+GGG | 0.543217 | 4.1:-18105162 | None:intergenic |
| AACATCTGTAAGTATGGAAG+CGG | 0.546719 | 4.1:+18105607 | MS.gene36506:CDS |
| GCAAGCTGTACAGCTGAGAC+CGG | 0.546898 | 4.1:-18106176 | None:intergenic |
| CAAGGATGGACTTCCCTTGG+TGG | 0.548086 | 4.1:+18105688 | MS.gene36506:CDS |
| TATATACAACTTTAACTCTA+GGG | 0.551474 | 4.1:-18106801 | None:intergenic |
| ATCTGGACTATATATCTGGC+CGG | 0.553085 | 4.1:-18106839 | None:intergenic |
| GGTGCGATGCTGATTGGGAA+TGG | 0.553849 | 4.1:-18104981 | None:intergenic |
| CATGAGAGTCTCTTAAATGT+TGG | 0.554708 | 4.1:+18108023 | MS.gene36506:CDS |
| TTTCTGCATTGTTGATTCTG+CGG | 0.554902 | 4.1:+18103987 | MS.gene36506:CDS |
| ACAACAACAGAATGGATGGC+TGG | 0.560974 | 4.1:-18107423 | None:intergenic |
| AGGTCCTGCGGTCAAGTAAG+TGG | 0.564330 | 4.1:+18107813 | MS.gene36506:CDS |
| AGGAAGAGGCAGGAAGACTC+AGG | 0.565443 | 4.1:+18103680 | MS.gene36506:CDS |
| TTTGCATTGCCGTCACGGCA+GGG | 0.565906 | 4.1:+18106884 | MS.gene36506:CDS |
| TAGGGAAACAACCATGAGCA+AGG | 0.568381 | 4.1:-18106783 | None:intergenic |
| CCTTCCTGTTTACACCGTCC+CGG | 0.569084 | 4.1:+18107464 | MS.gene36506:CDS |
| TTGGCCACTTACTTGACCGC+AGG | 0.570429 | 4.1:-18107817 | None:intergenic |
| GCTGAAAATGGCTTCAAGAG+TGG | 0.573798 | 4.1:+18103588 | None:intergenic |
| CAAGTAAGTGGCCAAACCGA+GGG | 0.574154 | 4.1:+18107825 | MS.gene36506:CDS |
| AATCAGCCCCATATGAGTAA+TGG | 0.574491 | 4.1:+18105321 | MS.gene36506:CDS |
| CAACAGAATGGATGGCTGGT+AGG | 0.574816 | 4.1:-18107419 | None:intergenic |
| AGCAAATGACCTTTCATGGA+AGG | 0.576121 | 4.1:-18105035 | None:intergenic |
| TAACTGCAGGGACGCTGGGG+TGG | 0.576829 | 4.1:+18107869 | MS.gene36506:CDS |
| TATACATCAAAGAAGTTCGC+CGG | 0.578486 | 4.1:+18106820 | MS.gene36506:CDS |
| GAATAGGCTAAAAGAAGGCA+AGG | 0.578682 | 4.1:-18106218 | None:intergenic |
| TGCAGAAAGAATATACTGGC+CGG | 0.579503 | 4.1:+18106681 | MS.gene36506:intron |
| CGGAGACGGGATTCTTACCC+CGG | 0.579878 | 4.1:+18105144 | MS.gene36506:CDS |
| AAGAGTGGACACTGATGAAG+AGG | 0.581426 | 4.1:+18103603 | MS.gene36506:CDS |
| GTATCTCTCTTCTTCCGGGA+CGG | 0.583221 | 4.1:-18107478 | None:intergenic |
| GTCCAGAATAGGCTAAAAGA+AGG | 0.583432 | 4.1:-18106223 | None:intergenic |
| GTCTACACAGAACTTGCAAG+TGG | 0.583444 | 4.1:+18107363 | MS.gene36506:CDS |
| AGAATGGATGGCTGGTAGGT+TGG | 0.583797 | 4.1:-18107415 | None:intergenic |
| CCTGCATGGTAATCGGAGAC+GGG | 0.583917 | 4.1:+18105131 | MS.gene36506:CDS |
| ATTAGGAAACACAGTTGTGA+TGG | 0.587624 | 4.1:+18107899 | MS.gene36506:CDS |
| TTCTACAACATATTTCCGAA+CGG | 0.589094 | 4.1:+18104070 | MS.gene36506:CDS |
| GAAACACAGTTGTGATGGCA+AGG | 0.591010 | 4.1:+18107904 | MS.gene36506:CDS |
| GAAGAGGTGGAAAACAAGGA+TGG | 0.591042 | 4.1:+18105674 | MS.gene36506:CDS |
| GTGATATTCACATTTGGCGG+CGG | 0.592182 | 4.1:-18107786 | None:intergenic |
| GAACGGTGTGAAAGATGAAG+AGG | 0.595547 | 4.1:+18104087 | MS.gene36506:CDS |
| ATATAGTCCAGATATCAATT+GGG | 0.598472 | 4.1:+18106849 | MS.gene36506:CDS |
| TGATAACAAAGGTAGTATGT+GGG | 0.599126 | 4.1:+18103627 | MS.gene36506:CDS |
| TCAAGTAAGTGGCCAAACCG+AGG | 0.600769 | 4.1:+18107824 | MS.gene36506:CDS |
| TTACCACATCTTTCGATGTG+TGG | 0.605821 | 4.1:+18107527 | MS.gene36506:CDS |
| GGTATTTGTTGTTGCAACAG+CGG | 0.608649 | 4.1:+18106702 | MS.gene36506:CDS |
| GACCGGAAAATGAGATAGGT+CGG | 0.608967 | 4.1:-18106159 | None:intergenic |
| CACGAACAAGTCCTAAACTT+GGG | 0.614583 | 4.1:-18107323 | None:intergenic |
| TGCATATCAGAGTCTTGGCG+TGG | 0.618746 | 4.1:+18104012 | MS.gene36506:CDS |
| ATAGTAAAGTCTCGATGGCA+TGG | 0.620677 | 4.1:+18107286 | MS.gene36506:CDS |
| AATATCACTGTTAGGTCCTG+CGG | 0.624494 | 4.1:+18107801 | MS.gene36506:CDS |
| AAGCACGACTTCTTCGAATG+TGG | 0.624780 | 4.1:+18107719 | MS.gene36506:CDS |
| AATCAATGATAAGCAAGTGA+AGG | 0.625371 | 4.1:-18107124 | None:intergenic |
| ATTTCTTAGGAAAATATGCA+GGG | 0.625694 | 4.1:+18107974 | MS.gene36506:CDS |
| AACACTCCGGCAATTACAAG+AGG | 0.633389 | 4.1:-18107204 | None:intergenic |
| ATCTTCAAAGTTAATCAAGG+TGG | 0.637689 | 4.1:+18107174 | MS.gene36506:CDS |
| AATGCATAGTAAAGTCTCGA+TGG | 0.638063 | 4.1:+18107281 | MS.gene36506:CDS |
| GAAGCTTGACCAGCCTATGG+AGG | 0.640712 | 4.1:+18103660 | MS.gene36506:CDS |
| AAGCTTGAATCTATGATGGA+AGG | 0.641141 | 4.1:+18107630 | MS.gene36506:CDS |
| AGGGAAACAACCATGAGCAA+GGG | 0.643819 | 4.1:-18106782 | None:intergenic |
| GAATAACTGCAGGGACGCTG+GGG | 0.645282 | 4.1:+18107866 | MS.gene36506:CDS |
| ACATCTTTCGATGTGTGGCA+CGG | 0.647935 | 4.1:+18107532 | MS.gene36506:CDS |
| AACATACCATTACTCATATG+GGG | 0.653081 | 4.1:-18105327 | None:intergenic |
| GATGAATACAGTTTATATGG+AGG | 0.656772 | 4.1:+18107666 | MS.gene36506:CDS |
| CCGGGACGGTGTAAACAGGA+AGG | 0.657637 | 4.1:-18107464 | None:intergenic |
| GATGAATTTATTAGGGACGG+AGG | 0.657712 | 4.1:+18106127 | MS.gene36506:intron |
| TTACCATGCAGGTGCCAGCA+AGG | 0.657855 | 4.1:-18105120 | None:intergenic |
| GATGAAGAGGGTGATAACAA+AGG | 0.665526 | 4.1:+18103616 | MS.gene36506:CDS |
| TTATATGGAGGACAGCAGGA+TGG | 0.666470 | 4.1:+18107678 | MS.gene36506:CDS |
| ACACAGTTGTGATGGCAAGG+AGG | 0.669872 | 4.1:+18107907 | MS.gene36506:CDS |
| AGAGCAAATGACAATGGACA+AGG | 0.674340 | 4.1:+18104187 | MS.gene36506:CDS |
| TTTGTTAACAGGTACTGCAG+TGG | 0.676356 | 4.1:+18107020 | MS.gene36506:intron |
| GTGTTAAGAGCAAATGACAA+TGG | 0.677304 | 4.1:+18104181 | MS.gene36506:CDS |
| GTGCCACACATCGAAAGATG+TGG | 0.686236 | 4.1:-18107530 | None:intergenic |
| ATGTTGTAGAAAACATACAA+AGG | 0.686924 | 4.1:-18104058 | None:intergenic |
| GTGATGAAATGAGAAAAGAT+CGG | 0.689117 | 4.1:-18107393 | None:intergenic |
| AAGTAAGTGGCCAAACCGAG+GGG | 0.689786 | 4.1:+18107826 | MS.gene36506:CDS |
| TACTGAGCATGATACCACCA+AGG | 0.690342 | 4.1:-18105702 | None:intergenic |
| ACTGAGCATGATACCACCAA+GGG | 0.691706 | 4.1:-18105701 | None:intergenic |
| CTCCTATTAGGAGAAACCAA+AGG | 0.694794 | 4.1:-18105570 | None:intergenic |
| AGAGTGGACACTGATGAAGA+GGG | 0.700617 | 4.1:+18103604 | MS.gene36506:CDS |
| CTATTAGGAGAAACCAAAGG+AGG | 0.702161 | 4.1:-18105567 | None:intergenic |
| ATGAAATGAGAAAAGATCGG+TGG | 0.702922 | 4.1:-18107390 | None:intergenic |
| AGTAAGTGGCCAAACCGAGG+GGG | 0.709182 | 4.1:+18107827 | MS.gene36506:CDS |
| ATATGTACCTGATATAGCCG+GGG | 0.713157 | 4.1:-18105161 | None:intergenic |
| ATATTTGAGAAGAGGCACCA+AGG | 0.717350 | 4.1:-18104149 | None:intergenic |
| ACATTTAAGAGACTCTCATG+AGG | 0.718347 | 4.1:-18108020 | None:intergenic |
| GATGGCGTGTTGAATAACAA+CGG | 0.731429 | 4.1:+18107696 | MS.gene36506:CDS |
| AGGCGAGTACAAGAATCCAG+TGG | 0.751362 | 4.1:-18107104 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATCATGATTAAAATCATA+AGG | - | chr4.1:18107071-18107090 | None:intergenic | 15.0% |
| !! | ATTATATATATGCATTTCTT+AGG | + | chr4.1:18107961-18107980 | MS.gene36506:CDS | 15.0% |
| !!! | CTTTTTTCTTTTTACTTTTT+TGG | + | chr4.1:18104657-18104676 | MS.gene36506:intron | 15.0% |
| !!! | TATGATTTTAATCATGATAT+TGG | + | chr4.1:18107071-18107090 | MS.gene36506:CDS | 15.0% |
| !! | AAAAAAGGATGGTTATATTA+GGG | + | chr4.1:18104548-18104567 | MS.gene36506:intron | 20.0% |
| !! | AAATAGTGATATATGTAAAC+AGG | - | chr4.1:18105652-18105671 | None:intergenic | 20.0% |
| !! | AATTGAGAGAAAATATTCAT+TGG | - | chr4.1:18106973-18106992 | None:intergenic | 20.0% |
| !! | ATAAAAACATATTTGAGAAG+AGG | - | chr4.1:18104160-18104179 | None:intergenic | 20.0% |
| !! | ATATTTAACATCTGTAAGTA+TGG | + | chr4.1:18105601-18105620 | MS.gene36506:CDS | 20.0% |
| !! | TACAATGTATTTAAGTACTA+CGG | - | chr4.1:18105886-18105905 | None:intergenic | 20.0% |
| !! | TATATACAACTTTAACTCTA+GGG | - | chr4.1:18106804-18106823 | None:intergenic | 20.0% |
| !!! | AACTTTTGGATGAATTTATT+AGG | + | chr4.1:18106119-18106138 | MS.gene36506:intron | 20.0% |
| !!! | ACTTTTGGATGAATTTATTA+GGG | + | chr4.1:18106120-18106139 | MS.gene36506:intron | 20.0% |
| !!! | ATATATCACTATTTTAGAAG+AGG | + | chr4.1:18105658-18105677 | MS.gene36506:CDS | 20.0% |
| !!! | ATTTTAATTACAGTTATGGA+AGG | - | chr4.1:18104816-18104835 | None:intergenic | 20.0% |
| !!! | GAGTATTTTAATTACAGTTA+TGG | - | chr4.1:18104820-18104839 | None:intergenic | 20.0% |
| !!! | GTTAATATTTGCATCTTTTA+TGG | + | chr4.1:18104355-18104374 | MS.gene36506:intron | 20.0% |
| !!! | GTTTTTAACGAATTTAAGTT+GGG | + | chr4.1:18105413-18105432 | MS.gene36506:intron | 20.0% |
| !!! | TATTGATAACAATGAAACTA+CGG | - | chr4.1:18104785-18104804 | None:intergenic | 20.0% |
| !!! | TCAATTGTTTTCTAAACTTT+TGG | + | chr4.1:18104212-18104231 | MS.gene36506:intron | 20.0% |
| !!! | TGAATTTACAATTTGTTAAC+AGG | + | chr4.1:18107009-18107028 | MS.gene36506:intron | 20.0% |
| !!! | TGTTTTTAACGAATTTAAGT+TGG | + | chr4.1:18105412-18105431 | MS.gene36506:intron | 20.0% |
| !!! | TTTCTCTTATATTTTTCGAA+TGG | + | chr4.1:18106618-18106637 | MS.gene36506:intron | 20.0% |
| !!! | TTTCTTTTTGGTAGATAAAA+TGG | + | chr4.1:18103776-18103795 | MS.gene36506:intron | 20.0% |
| !!! | TTTTGTACTTTAACAACTTT+TGG | + | chr4.1:18106105-18106124 | MS.gene36506:intron | 20.0% |
| !!! | TTTTTATCATTATGTTTGTC+TGG | + | chr4.1:18107226-18107245 | MS.gene36506:CDS | 20.0% |
| ! | AAAAAAGAAATTGCCTCTAA+AGG | - | chr4.1:18104644-18104663 | None:intergenic | 25.0% |
| ! | AAAAACACAATCACAAACAT+TGG | - | chr4.1:18103845-18103864 | None:intergenic | 25.0% |
| ! | AACACTAATTACATTAAGGA+AGG | - | chr4.1:18105785-18105804 | None:intergenic | 25.0% |
| ! | AATGAGTCAAGTTATTCATA+AGG | - | chr4.1:18106259-18106278 | None:intergenic | 25.0% |
| ! | AGAGACAATGTTAAATTCAT+AGG | - | chr4.1:18103740-18103759 | None:intergenic | 25.0% |
| ! | ATAAAACTACATGGAAGATA+TGG | - | chr4.1:18105278-18105297 | None:intergenic | 25.0% |
| ! | ATACAAAAACAACAACAGAA+TGG | - | chr4.1:18107434-18107453 | None:intergenic | 25.0% |
| ! | ATATAGTCCAGATATCAATT+GGG | + | chr4.1:18106849-18106868 | MS.gene36506:CDS | 25.0% |
| ! | ATATATGTAAACAGGAGAAA+AGG | - | chr4.1:18105644-18105663 | None:intergenic | 25.0% |
| ! | ATGTTGTAGAAAACATACAA+AGG | - | chr4.1:18104061-18104080 | None:intergenic | 25.0% |
| ! | ATTTCTTAGGAAAATATGCA+GGG | + | chr4.1:18107974-18107993 | MS.gene36506:CDS | 25.0% |
| ! | CAATTGTTAGAACAATAACT+CGG | - | chr4.1:18106041-18106060 | None:intergenic | 25.0% |
| ! | CATAATGATAAAAAACACTC+CGG | - | chr4.1:18107220-18107239 | None:intergenic | 25.0% |
| ! | CCAAAAAGAAAATCAATATG+AGG | - | chr4.1:18103767-18103786 | None:intergenic | 25.0% |
| ! | GAAAAAAGGATGGTTATATT+AGG | + | chr4.1:18104547-18104566 | MS.gene36506:intron | 25.0% |
| ! | GCCAGATACAAATTTAAAAA+GGG | + | chr4.1:18104386-18104405 | MS.gene36506:intron | 25.0% |
| ! | GTAATCTTCAAAGTTAATCA+AGG | + | chr4.1:18107171-18107190 | MS.gene36506:CDS | 25.0% |
| ! | GTATATACAACTTTAACTCT+AGG | - | chr4.1:18106805-18106824 | None:intergenic | 25.0% |
| ! | TAAGAATCTCTTCAAATAGA+TGG | - | chr4.1:18105254-18105273 | None:intergenic | 25.0% |
| ! | TATAACCCTATATTAGAACA+GGG | - | chr4.1:18104589-18104608 | None:intergenic | 25.0% |
| ! | TATATAGTCCAGATATCAAT+TGG | + | chr4.1:18106848-18106867 | MS.gene36506:CDS | 25.0% |
| ! | TATATTGAAATCTTCATGTC+TGG | + | chr4.1:18106329-18106348 | MS.gene36506:intron | 25.0% |
| ! | TATTTCCCTGTTCTAATATA+GGG | + | chr4.1:18104581-18104600 | MS.gene36506:intron | 25.0% |
| ! | TCAGATGAATACAGTTTATA+TGG | + | chr4.1:18107663-18107682 | MS.gene36506:CDS | 25.0% |
| ! | TCCTTAATGTAATTAGTGTT+GGG | + | chr4.1:18105785-18105804 | MS.gene36506:intron | 25.0% |
| ! | TGCCAGATACAAATTTAAAA+AGG | + | chr4.1:18104385-18104404 | MS.gene36506:intron | 25.0% |
| ! | TTATAACCCTATATTAGAAC+AGG | - | chr4.1:18104590-18104609 | None:intergenic | 25.0% |
| ! | TTCCTTAATGTAATTAGTGT+TGG | + | chr4.1:18105784-18105803 | MS.gene36506:intron | 25.0% |
| ! | TTGAAAAGCTTCTTTATCTT+TGG | + | chr4.1:18105441-18105460 | MS.gene36506:intron | 25.0% |
| !! | ACAGTATTTTCAAACTCTAT+GGG | - | chr4.1:18106539-18106558 | None:intergenic | 25.0% |
| !! | ATATGTTGTTAGTTCTTCAT+CGG | - | chr4.1:18105005-18105024 | None:intergenic | 25.0% |
| !! | ATTGCTGTTGTAATATTAGT+TGG | + | chr4.1:18105484-18105503 | MS.gene36506:CDS | 25.0% |
| !! | TACAGTATTTTCAAACTCTA+TGG | - | chr4.1:18106540-18106559 | None:intergenic | 25.0% |
| !! | TCCCTTTTTAAATTTGTATC+TGG | - | chr4.1:18104390-18104409 | None:intergenic | 25.0% |
| !! | TGAATTTTTGAATAACTGCA+GGG | + | chr4.1:18107857-18107876 | MS.gene36506:CDS | 25.0% |
| !! | TTGAATTTTTGAATAACTGC+AGG | + | chr4.1:18107856-18107875 | MS.gene36506:CDS | 25.0% |
| !! | TTTTAATCATGATATTGGTG+TGG | + | chr4.1:18107076-18107095 | MS.gene36506:CDS | 25.0% |
| !!! | CCTCATATTGATTTTCTTTT+TGG | + | chr4.1:18103764-18103783 | MS.gene36506:intron | 25.0% |
| !!! | TAGTTTTATTATGCCTTTAG+AGG | + | chr4.1:18104628-18104647 | MS.gene36506:intron | 25.0% |
| !!! | TATCTTCCATGTAGTTTTAT+CGG | + | chr4.1:18105278-18105297 | MS.gene36506:intron | 25.0% |
| AAAAACAACAACAGAATGGA+TGG | - | chr4.1:18107430-18107449 | None:intergenic | 30.0% | |
| AAAAACTAAAAGATGGTTGG+AGG | + | chr4.1:18105060-18105079 | MS.gene36506:CDS | 30.0% | |
| AAAGATACGAAAAACACAAG+CGG | - | chr4.1:18106007-18106026 | None:intergenic | 30.0% | |
| AAATGCTTCAGAAAAAAGGA+TGG | + | chr4.1:18104537-18104556 | MS.gene36506:intron | 30.0% | |
| AACATACCATTACTCATATG+GGG | - | chr4.1:18105330-18105349 | None:intergenic | 30.0% | |
| AATCAATGATAAGCAAGTGA+AGG | - | chr4.1:18107127-18107146 | None:intergenic | 30.0% | |
| ACAAATGGAAACAAAATGAG+TGG | - | chr4.1:18104303-18104322 | None:intergenic | 30.0% | |
| ACATCAGAATAGAAAACTGA+GGG | + | chr4.1:18106581-18106600 | MS.gene36506:intron | 30.0% | |
| ACTACACTAAATATACACTG+TGG | - | chr4.1:18104337-18104356 | None:intergenic | 30.0% | |
| ATATACCAATACCTCCTATT+AGG | - | chr4.1:18105585-18105604 | None:intergenic | 30.0% | |
| ATATGTAAGCTCTTGGAATT+TGG | + | chr4.1:18103922-18103941 | MS.gene36506:intron | 30.0% | |
| ATCAACATCTAAGTGTCTAA+TGG | - | chr4.1:18106649-18106668 | None:intergenic | 30.0% | |
| ATCTTCAAAGTTAATCAAGG+TGG | + | chr4.1:18107174-18107193 | MS.gene36506:CDS | 30.0% | |
| ATTATGTTTGTCTGGCATTA+CGG | + | chr4.1:18107234-18107253 | MS.gene36506:CDS | 30.0% | |
| CAAATGTGAATATCACTGTT+AGG | + | chr4.1:18107793-18107812 | MS.gene36506:CDS | 30.0% | |
| CATTATCAGTTACATAGTCA+TGG | - | chr4.1:18104708-18104727 | None:intergenic | 30.0% | |
| CATTTCTTAGGAAAATATGC+AGG | + | chr4.1:18107973-18107992 | MS.gene36506:CDS | 30.0% | |
| CGAGTTATTGTTCTAACAAT+TGG | + | chr4.1:18106039-18106058 | MS.gene36506:intron | 30.0% | |
| CTAACAGTGATATTCACATT+TGG | - | chr4.1:18107795-18107814 | None:intergenic | 30.0% | |
| CTACACTAAATATACACTGT+GGG | - | chr4.1:18104336-18104355 | None:intergenic | 30.0% | |
| GAACATACCATTACTCATAT+GGG | - | chr4.1:18105331-18105350 | None:intergenic | 30.0% | |
| GATGAATACAGTTTATATGG+AGG | + | chr4.1:18107666-18107685 | MS.gene36506:CDS | 30.0% | |
| GGAAGGAGATCAAAAAAAAA+AGG | - | chr4.1:18105768-18105787 | None:intergenic | 30.0% | |
| GGAGATCAAAAAAAAAAGGA+AGG | - | chr4.1:18105764-18105783 | None:intergenic | 30.0% | |
| GTATTTCCCTGTTCTAATAT+AGG | + | chr4.1:18104580-18104599 | MS.gene36506:intron | 30.0% | |
| GTGATGAAATGAGAAAAGAT+CGG | - | chr4.1:18107396-18107415 | None:intergenic | 30.0% | |
| TAAGCTAATATGTAAGCTCT+TGG | + | chr4.1:18103915-18103934 | MS.gene36506:intron | 30.0% | |
| TAATCAATAGCATGCTATAG+CGG | + | chr4.1:18104430-18104449 | MS.gene36506:intron | 30.0% | |
| TGATAACAAAGGTAGTATGT+GGG | + | chr4.1:18103627-18103646 | MS.gene36506:CDS | 30.0% | |
| TGATATCTGGACTATATATC+TGG | - | chr4.1:18106846-18106865 | None:intergenic | 30.0% | |
| TGCAAAAACTAAAAGATGGT+TGG | + | chr4.1:18105057-18105076 | MS.gene36506:CDS | 30.0% | |
| TGCTAAATGCTTCAGAAAAA+AGG | + | chr4.1:18104533-18104552 | MS.gene36506:intron | 30.0% | |
| TGTTAAGCTTGAATCTATGA+TGG | + | chr4.1:18107626-18107645 | MS.gene36506:CDS | 30.0% | |
| TTCGAAAATCAAAACCAGAT+TGG | + | chr4.1:18106907-18106926 | MS.gene36506:CDS | 30.0% | |
| TTCTACAACATATTTCCGAA+CGG | + | chr4.1:18104070-18104089 | MS.gene36506:CDS | 30.0% | |
| TTGCTGCAAAAACTAAAAGA+TGG | + | chr4.1:18105053-18105072 | MS.gene36506:CDS | 30.0% | |
| TTGGATGAATTTATTAGGGA+CGG | + | chr4.1:18106124-18106143 | MS.gene36506:intron | 30.0% | |
| ! | GCTTTTTATCTTTCTATTCC+AGG | + | chr4.1:18106287-18106306 | MS.gene36506:CDS | 30.0% |
| ! | GTTTTGCAGAAAGAATATAC+TGG | + | chr4.1:18106677-18106696 | MS.gene36506:intron | 30.0% |
| !! | TATCACTATTTTAGAAGAGG+TGG | + | chr4.1:18105661-18105680 | MS.gene36506:CDS | 30.0% |
| !! | TATTTTTGTACCACTATGCA+TGG | + | chr4.1:18105379-18105398 | MS.gene36506:intron | 30.0% |
| AAAACTGACATTTGTAGAGC+AGG | + | chr4.1:18104908-18104927 | MS.gene36506:intron | 35.0% | |
| AACATCTGTAAGTATGGAAG+CGG | + | chr4.1:18105607-18105626 | MS.gene36506:CDS | 35.0% | |
| AACCAGATTGGAAATGCTTA+TGG | + | chr4.1:18106919-18106938 | MS.gene36506:CDS | 35.0% | |
| AAGAGAGATACCTTGTAAAG+AGG | + | chr4.1:18107490-18107509 | MS.gene36506:CDS | 35.0% | |
| AATGCATAGTAAAGTCTCGA+TGG | + | chr4.1:18107281-18107300 | MS.gene36506:CDS | 35.0% | |
| AATTGTCTTGCTACAGAAGT+AGG | - | chr4.1:18105353-18105372 | None:intergenic | 35.0% | |
| ACACTGACACTTTAGATTGA+AGG | + | chr4.1:18106359-18106378 | MS.gene36506:intron | 35.0% | |
| ACAGTGATATTCACATTTGG+CGG | - | chr4.1:18107792-18107811 | None:intergenic | 35.0% | |
| ACATTTAAGAGACTCTCATG+AGG | - | chr4.1:18108023-18108042 | None:intergenic | 35.0% | |
| AGATACCTTGTAAAGAGGAT+TGG | + | chr4.1:18107495-18107514 | MS.gene36506:CDS | 35.0% | |
| AGCAAGGACAAGAATAAGAA+TGG | - | chr4.1:18105107-18105126 | None:intergenic | 35.0% | |
| AGCTTTCAGCGATAATAGAA+AGG | + | chr4.1:18105920-18105939 | MS.gene36506:intron | 35.0% | |
| AGTAAAAAGTTCAGCTAACC+TGG | - | chr4.1:18106308-18106327 | None:intergenic | 35.0% | |
| ATAAGGACCCAATTGATATC+TGG | - | chr4.1:18106859-18106878 | None:intergenic | 35.0% | |
| ATAGCTCACAGTTTATGGAT+AGG | + | chr4.1:18105809-18105828 | MS.gene36506:intron | 35.0% | |
| ATGAAATGAGAAAAGATCGG+TGG | - | chr4.1:18107393-18107412 | None:intergenic | 35.0% | |
| ATTAGGAAACACAGTTGTGA+TGG | + | chr4.1:18107899-18107918 | MS.gene36506:CDS | 35.0% | |
| ATTCCCTTTGTACAATCTCA+AGG | - | chr4.1:18104239-18104258 | None:intergenic | 35.0% | |
| ATTCTTATTCTTGTCCTTGC+TGG | + | chr4.1:18105106-18105125 | MS.gene36506:CDS | 35.0% | |
| CAAAGTTAATCAAGGTGGAT+GGG | + | chr4.1:18107179-18107198 | MS.gene36506:CDS | 35.0% | |
| CAAGCTTAACAAACAGTGAA+AGG | - | chr4.1:18107617-18107636 | None:intergenic | 35.0% | |
| CAATATTTAACCACGGAGTT+CGG | - | chr4.1:18105976-18105995 | None:intergenic | 35.0% | |
| CACATCAGAATAGAAAACTG+AGG | + | chr4.1:18106580-18106599 | MS.gene36506:intron | 35.0% | |
| CAGGTAAGAATCTGAGAAAA+AGG | - | chr4.1:18106447-18106466 | None:intergenic | 35.0% | |
| CATGAGAGTCTCTTAAATGT+TGG | + | chr4.1:18108023-18108042 | MS.gene36506:CDS | 35.0% | |
| CGAAAGATGTGGTAATTCTT+AGG | - | chr4.1:18107522-18107541 | None:intergenic | 35.0% | |
| CTATTATCGCTGAAAGCTTA+GGG | - | chr4.1:18105918-18105937 | None:intergenic | 35.0% | |
| GAGCACACAATATTTAACCA+CGG | - | chr4.1:18105983-18106002 | None:intergenic | 35.0% | |
| GATTATCTACTCTCTTACCT+TGG | + | chr4.1:18104132-18104151 | MS.gene36506:CDS | 35.0% | |
| GCCCAACACTAATTACATTA+AGG | - | chr4.1:18105789-18105808 | None:intergenic | 35.0% | |
| GCTTCTTTATCTTTGGATAC+AGG | + | chr4.1:18105448-18105467 | MS.gene36506:intron | 35.0% | |
| GGAACATACCATTACTCATA+TGG | - | chr4.1:18105332-18105351 | None:intergenic | 35.0% | |
| GTGATAACAAAGGTAGTATG+TGG | + | chr4.1:18103626-18103645 | MS.gene36506:CDS | 35.0% | |
| GTGGGAATCATCATTACAAA+TGG | - | chr4.1:18104318-18104337 | None:intergenic | 35.0% | |
| GTGTTAAGAGCAAATGACAA+TGG | + | chr4.1:18104181-18104200 | MS.gene36506:CDS | 35.0% | |
| TACCATAAGCATTTCCAATC+TGG | - | chr4.1:18106924-18106943 | None:intergenic | 35.0% | |
| TAGCTCACAGTTTATGGATA+GGG | + | chr4.1:18105810-18105829 | MS.gene36506:intron | 35.0% | |
| TATACATCAAAGAAGTTCGC+CGG | + | chr4.1:18106820-18106839 | MS.gene36506:CDS | 35.0% | |
| TCAAAGTTAATCAAGGTGGA+TGG | + | chr4.1:18107178-18107197 | MS.gene36506:CDS | 35.0% | |
| TCTATTATCGCTGAAAGCTT+AGG | - | chr4.1:18105919-18105938 | None:intergenic | 35.0% | |
| TGTATTTAAGTACTACGGTC+TGG | - | chr4.1:18105881-18105900 | None:intergenic | 35.0% | |
| TTTAGAAGAGGTGGAAAACA+AGG | + | chr4.1:18105670-18105689 | MS.gene36506:CDS | 35.0% | |
| TTTATCTTTGGATACAGGTG+TGG | + | chr4.1:18105453-18105472 | MS.gene36506:intron | 35.0% | |
| ! | AAGCTTGAATCTATGATGGA+AGG | + | chr4.1:18107630-18107649 | MS.gene36506:CDS | 35.0% |
| ! | ACTAATTAGCTTCAGAGAGA+AGG | - | chr4.1:18105188-18105207 | None:intergenic | 35.0% |
| ! | CACTTGCTTATCATTGATTG+TGG | + | chr4.1:18107128-18107147 | MS.gene36506:CDS | 35.0% |
| ! | GCATTTAGCAGTTGCAATTT+TGG | - | chr4.1:18104523-18104542 | None:intergenic | 35.0% |
| ! | TGGTTTTTATCTTTGCGTGT+CGG | - | chr4.1:18104964-18104983 | None:intergenic | 35.0% |
| ! | TTCTGATGTGTTGATATGCT+TGG | - | chr4.1:18106570-18106589 | None:intergenic | 35.0% |
| ! | TTTCTCCTAATAGGAGGTAT+TGG | + | chr4.1:18105577-18105596 | MS.gene36506:CDS | 35.0% |
| ! | TTTTCTCAGATTCTTACCTG+CGG | + | chr4.1:18106447-18106466 | MS.gene36506:intron | 35.0% |
| !! | AAAGATGAAGAGGAAGTACT+TGG | + | chr4.1:18104097-18104116 | MS.gene36506:CDS | 35.0% |
| !! | TAATAGAAAGGTACTGCACT+CGG | + | chr4.1:18105932-18105951 | MS.gene36506:intron | 35.0% |
| !! | TTTCTGCATTGTTGATTCTG+CGG | + | chr4.1:18103987-18104006 | MS.gene36506:CDS | 35.0% |
| !! | TTTTTCAGCCTGCAACATTA+TGG | + | chr4.1:18105508-18105527 | MS.gene36506:CDS | 35.0% |
| !!! | GTGCATAGTTTTGTATAGAG+TGG | + | chr4.1:18104741-18104760 | MS.gene36506:intron | 35.0% |
| AATATCACTGTTAGGTCCTG+CGG | + | chr4.1:18107801-18107820 | MS.gene36506:CDS | 40.0% | |
| AATCAGCCCCATATGAGTAA+TGG | + | chr4.1:18105321-18105340 | MS.gene36506:CDS | 40.0% | |
| ACACGAACAAGTCCTAAACT+TGG | - | chr4.1:18107327-18107346 | None:intergenic | 40.0% | |
| AGAAACCAAAGGAGGACAAT+TGG | - | chr4.1:18105562-18105581 | None:intergenic | 40.0% | |
| AGAGCAAATGACAATGGACA+AGG | + | chr4.1:18104187-18104206 | MS.gene36506:CDS | 40.0% | |
| AGCAAATGACCTTTCATGGA+AGG | - | chr4.1:18105038-18105057 | None:intergenic | 40.0% | |
| ATAGTAAAGTCTCGATGGCA+TGG | + | chr4.1:18107286-18107305 | MS.gene36506:CDS | 40.0% | |
| ATATGTACCTGATATAGCCG+GGG | - | chr4.1:18105164-18105183 | None:intergenic | 40.0% | |
| ATCTGGACTATATATCTGGC+CGG | - | chr4.1:18106842-18106861 | None:intergenic | 40.0% | |
| ATGGCACAGACAAAGTTAGT+TGG | + | chr4.1:18105527-18105546 | MS.gene36506:CDS | 40.0% | |
| ATTGGAAATCTGTAGCAGAG+TGG | + | chr4.1:18104464-18104483 | MS.gene36506:intron | 40.0% | |
| CAAAGGTAGTATGTGGGATT+TGG | + | chr4.1:18103633-18103652 | MS.gene36506:CDS | 40.0% | |
| CAACAGCCGATAAAACTACA+TGG | - | chr4.1:18105287-18105306 | None:intergenic | 40.0% | |
| CACGAACAAGTCCTAAACTT+GGG | - | chr4.1:18107326-18107345 | None:intergenic | 40.0% | |
| CATATGTACCTGATATAGCC+GGG | - | chr4.1:18105165-18105184 | None:intergenic | 40.0% | |
| CGGCAATGCAAAGAATCATA+AGG | - | chr4.1:18106876-18106895 | None:intergenic | 40.0% | |
| CTAAATGCTTCCATGCATAG+TGG | - | chr4.1:18105392-18105411 | None:intergenic | 40.0% | |
| CTATTAGGAGAAACCAAAGG+AGG | - | chr4.1:18105570-18105589 | None:intergenic | 40.0% | |
| CTCCTATTAGGAGAAACCAA+AGG | - | chr4.1:18105573-18105592 | None:intergenic | 40.0% | |
| GAAACTATGACGCACTAACA+CGG | - | chr4.1:18106509-18106528 | None:intergenic | 40.0% | |
| GAATAGGCTAAAAGAAGGCA+AGG | - | chr4.1:18106221-18106240 | None:intergenic | 40.0% | |
| GATGAAGAGGGTGATAACAA+AGG | + | chr4.1:18103616-18103635 | MS.gene36506:CDS | 40.0% | |
| GATGAATTTATTAGGGACGG+AGG | + | chr4.1:18106127-18106146 | MS.gene36506:intron | 40.0% | |
| GATGGCGTGTTGAATAACAA+CGG | + | chr4.1:18107696-18107715 | MS.gene36506:CDS | 40.0% | |
| GCATATGTACCTGATATAGC+CGG | - | chr4.1:18105166-18105185 | None:intergenic | 40.0% | |
| GCTGTTGCAACAACAAATAC+CGG | - | chr4.1:18106703-18106722 | None:intergenic | 40.0% | |
| GGTATCATGCTCAGTATAAC+AGG | + | chr4.1:18105709-18105728 | MS.gene36506:CDS | 40.0% | |
| GGTCCTTGAGATTGTACAAA+GGG | + | chr4.1:18104233-18104252 | MS.gene36506:intron | 40.0% | |
| GTCCAGAATAGGCTAAAAGA+AGG | - | chr4.1:18106226-18106245 | None:intergenic | 40.0% | |
| TAGGTCCAATCCTCTTTACA+AGG | - | chr4.1:18107503-18107522 | None:intergenic | 40.0% | |
| TCACAGTTTATGGATAGGGT+AGG | + | chr4.1:18105814-18105833 | MS.gene36506:intron | 40.0% | |
| TCTTCATCTTTCACACCGTT+CGG | - | chr4.1:18104088-18104107 | None:intergenic | 40.0% | |
| TGCAGAAAGAATATACTGGC+CGG | + | chr4.1:18106681-18106700 | MS.gene36506:intron | 40.0% | |
| TGGTCCTTGAGATTGTACAA+AGG | + | chr4.1:18104232-18104251 | MS.gene36506:intron | 40.0% | |
| TGTACAGCTTGCATTTACTC+TGG | + | chr4.1:18106187-18106206 | MS.gene36506:CDS | 40.0% | |
| TGTTAGTGCGTCATAGTTTC+TGG | + | chr4.1:18106509-18106528 | MS.gene36506:intron | 40.0% | |
| TTACCACATCTTTCGATGTG+TGG | + | chr4.1:18107527-18107546 | MS.gene36506:CDS | 40.0% | |
| TTGCAGCAAATGACCTTTCA+TGG | - | chr4.1:18105042-18105061 | None:intergenic | 40.0% | |
| ! | AAATTCAAGTTCATCCCCCT+CGG | - | chr4.1:18107844-18107863 | None:intergenic | 40.0% |
| ! | ACAAGGTATCTCTCTTCTTC+CGG | - | chr4.1:18107486-18107505 | None:intergenic | 40.0% |
| ! | CTATGTTTTGCTCAAGACCT+AGG | + | chr4.1:18104682-18104701 | MS.gene36506:intron | 40.0% |
| ! | CTCCTTTGGTTTCTCCTAAT+AGG | + | chr4.1:18105568-18105587 | MS.gene36506:CDS | 40.0% |
| ! | CTTTGGTTTCTCCTAATAGG+AGG | + | chr4.1:18105571-18105590 | MS.gene36506:CDS | 40.0% |
| ! | TGCCTTCTTTTAGCCTATTC+TGG | + | chr4.1:18106221-18106240 | MS.gene36506:CDS | 40.0% |
| ! | TTTGTTAACAGGTACTGCAG+TGG | + | chr4.1:18107020-18107039 | MS.gene36506:intron | 40.0% |
| !! | ATATTTGAGAAGAGGCACCA+AGG | - | chr4.1:18104152-18104171 | None:intergenic | 40.0% |
| !! | GGTATTTGTTGTTGCAACAG+CGG | + | chr4.1:18106702-18106721 | MS.gene36506:CDS | 40.0% |
| !! | TAACATGTTAGTCTTGTGCC+TGG | + | chr4.1:18106473-18106492 | MS.gene36506:intron | 40.0% |
| !!! | CATGTAGTTTTATCGGCTGT+TGG | + | chr4.1:18105285-18105304 | MS.gene36506:intron | 40.0% |
| !!! | TAGTTTTATCGGCTGTTGGT+GGG | + | chr4.1:18105289-18105308 | MS.gene36506:intron | 40.0% |
| AACACTCCGGCAATTACAAG+AGG | - | chr4.1:18107207-18107226 | None:intergenic | 45.0% | |
| AAGAGTGGACACTGATGAAG+AGG | + | chr4.1:18103603-18103622 | MS.gene36506:CDS | 45.0% | |
| AAGCACGACTTCTTCGAATG+TGG | + | chr4.1:18107719-18107738 | MS.gene36506:CDS | 45.0% | |
| ACAACAACAGAATGGATGGC+TGG | - | chr4.1:18107426-18107445 | None:intergenic | 45.0% | |
| ACATCTTTCGATGTGTGGCA+CGG | + | chr4.1:18107532-18107551 | MS.gene36506:CDS | 45.0% | |
| ACTCTTCGTCTTTCTTGTGC+AGG | - | chr4.1:18107572-18107591 | None:intergenic | 45.0% | |
| ACTGACATTTGTAGAGCAGG+TGG | + | chr4.1:18104911-18104930 | MS.gene36506:intron | 45.0% | |
| ACTGAGCATGATACCACCAA+GGG | - | chr4.1:18105704-18105723 | None:intergenic | 45.0% | |
| AGAGTGGACACTGATGAAGA+GGG | + | chr4.1:18103604-18103623 | MS.gene36506:CDS | 45.0% | |
| AGGGAAACAACCATGAGCAA+GGG | - | chr4.1:18106785-18106804 | None:intergenic | 45.0% | |
| ATAGCATGCTATAGCGGCAT+TGG | + | chr4.1:18104436-18104455 | MS.gene36506:intron | 45.0% | |
| ATGTTGCAGTTATTGTCGCC+TGG | - | chr4.1:18106744-18106763 | None:intergenic | 45.0% | |
| ATTAAGCAAGCCCTTGCTCA+TGG | + | chr4.1:18106772-18106791 | MS.gene36506:CDS | 45.0% | |
| ATTCTTACCCCGGCTATATC+AGG | + | chr4.1:18105154-18105173 | MS.gene36506:CDS | 45.0% | |
| CAGTTACATAGTCATGGCCT+AGG | - | chr4.1:18104702-18104721 | None:intergenic | 45.0% | |
| CAGTTTATATGGAGGACAGC+AGG | + | chr4.1:18107674-18107693 | MS.gene36506:CDS | 45.0% | |
| CTGAGACCGGAAAATGAGAT+AGG | - | chr4.1:18106166-18106185 | None:intergenic | 45.0% | |
| CTTGTTCGTGTACCTGGAAT+CGG | + | chr4.1:18107336-18107355 | MS.gene36506:CDS | 45.0% | |
| GAAACACAGTTGTGATGGCA+AGG | + | chr4.1:18107904-18107923 | MS.gene36506:CDS | 45.0% | |
| GAACGGTGTGAAAGATGAAG+AGG | + | chr4.1:18104087-18104106 | MS.gene36506:CDS | 45.0% | |
| GAAGAGGTGGAAAACAAGGA+TGG | + | chr4.1:18105674-18105693 | MS.gene36506:CDS | 45.0% | |
| GACCGGAAAATGAGATAGGT+CGG | - | chr4.1:18106162-18106181 | None:intergenic | 45.0% | |
| GACTAACATGTTAACACCGC+AGG | - | chr4.1:18106466-18106485 | None:intergenic | 45.0% | |
| GATTCTTTGCATTGCCGTCA+CGG | + | chr4.1:18106879-18106898 | MS.gene36506:CDS | 45.0% | |
| GGCGTGGTTTATGGAGATTT+AGG | + | chr4.1:18104028-18104047 | MS.gene36506:CDS | 45.0% | |
| GTATGCAGCTTGTCCAGAAT+AGG | - | chr4.1:18106237-18106256 | None:intergenic | 45.0% | |
| GTCGTTCTACCTTCCATGAA+AGG | + | chr4.1:18105026-18105045 | MS.gene36506:CDS | 45.0% | |
| GTCTACACAGAACTTGCAAG+TGG | + | chr4.1:18107363-18107382 | MS.gene36506:CDS | 45.0% | |
| GTGAATCTAGTGTCCAACAC+CGG | + | chr4.1:18106381-18106400 | MS.gene36506:intron | 45.0% | |
| GTGATATTCACATTTGGCGG+CGG | - | chr4.1:18107789-18107808 | None:intergenic | 45.0% | |
| TACTGAGCATGATACCACCA+AGG | - | chr4.1:18105705-18105724 | None:intergenic | 45.0% | |
| TAGGGAAACAACCATGAGCA+AGG | - | chr4.1:18106786-18106805 | None:intergenic | 45.0% | |
| TGGGCATAGCTCACAGTTTA+TGG | + | chr4.1:18105804-18105823 | MS.gene36506:intron | 45.0% | |
| TGGGTTCCTCTTGTAATTGC+CGG | + | chr4.1:18107198-18107217 | MS.gene36506:CDS | 45.0% | |
| TGTCTGTGCCATAATGTTGC+AGG | - | chr4.1:18105519-18105538 | None:intergenic | 45.0% | |
| TTATATGGAGGACAGCAGGA+TGG | + | chr4.1:18107678-18107697 | MS.gene36506:CDS | 45.0% | |
| TTGCTCCAATTGTCCTCCTT+TGG | + | chr4.1:18105554-18105573 | MS.gene36506:CDS | 45.0% | |
| ! | AAACAAGGATGGACTTCCCT+TGG | + | chr4.1:18105685-18105704 | MS.gene36506:CDS | 45.0% |
| ! | CAAGGTATCTCTCTTCTTCC+GGG | - | chr4.1:18107485-18107504 | None:intergenic | 45.0% |
| ! | TTAGGACTTGTTCGTGTACC+TGG | + | chr4.1:18107330-18107349 | MS.gene36506:CDS | 45.0% |
| !!! | GTAGTTTTATCGGCTGTTGG+TGG | + | chr4.1:18105288-18105307 | MS.gene36506:intron | 45.0% |
| AAGTAAGTGGCCAAACCGAG+GGG | + | chr4.1:18107826-18107845 | MS.gene36506:CDS | 50.0% | |
| ACACAGTTGTGATGGCAAGG+AGG | + | chr4.1:18107907-18107926 | MS.gene36506:CDS | 50.0% | |
| ACCTGCATGGTAATCGGAGA+CGG | + | chr4.1:18105130-18105149 | MS.gene36506:CDS | 50.0% | |
| AGAATGGATGGCTGGTAGGT+TGG | - | chr4.1:18107418-18107437 | None:intergenic | 50.0% | |
| AGGCGAGTACAAGAATCCAG+TGG | - | chr4.1:18107107-18107126 | None:intergenic | 50.0% | |
| CAACAGAATGGATGGCTGGT+AGG | - | chr4.1:18107422-18107441 | None:intergenic | 50.0% | |
| CAAGTAAGTGGCCAAACCGA+GGG | + | chr4.1:18107825-18107844 | MS.gene36506:CDS | 50.0% | |
| CACAGTTGTGATGGCAAGGA+GGG | + | chr4.1:18107908-18107927 | MS.gene36506:CDS | 50.0% | |
| CAGAGTCTTGGCGTGGTTTA+TGG | + | chr4.1:18104019-18104038 | MS.gene36506:CDS | 50.0% | |
| CGGCTTGCATATCAGAGTCT+TGG | + | chr4.1:18104007-18104026 | MS.gene36506:CDS | 50.0% | |
| CTCGGAGACGTAGGCATAAT+TGG | + | chr4.1:18105950-18105969 | MS.gene36506:intron | 50.0% | |
| GCTGGGGTGGTTCACATATT+AGG | + | chr4.1:18107882-18107901 | MS.gene36506:CDS | 50.0% | |
| GGTTGGAGGAACGTGAATCA+TGG | + | chr4.1:18105074-18105093 | MS.gene36506:CDS | 50.0% | |
| GTATCTCTCTTCTTCCGGGA+CGG | - | chr4.1:18107481-18107500 | None:intergenic | 50.0% | |
| GTCTCGATGGCATGGATTCT+CGG | + | chr4.1:18107294-18107313 | MS.gene36506:CDS | 50.0% | |
| GTGCCACACATCGAAAGATG+TGG | - | chr4.1:18107533-18107552 | None:intergenic | 50.0% | |
| TCAAGTAAGTGGCCAAACCG+AGG | + | chr4.1:18107824-18107843 | MS.gene36506:CDS | 50.0% | |
| TCAGAAGCTTGACCAGCCTA+TGG | + | chr4.1:18103657-18103676 | MS.gene36506:CDS | 50.0% | |
| TCTCGATGGCATGGATTCTC+GGG | + | chr4.1:18107295-18107314 | MS.gene36506:CDS | 50.0% | |
| TGAATAACTGCAGGGACGCT+GGG | + | chr4.1:18107865-18107884 | MS.gene36506:CDS | 50.0% | |
| TGCATATCAGAGTCTTGGCG+TGG | + | chr4.1:18104012-18104031 | MS.gene36506:CDS | 50.0% | |
| TTCATCGGTGCGATGCTGAT+TGG | - | chr4.1:18104990-18105009 | None:intergenic | 50.0% | |
| TTGAATAACTGCAGGGACGC+TGG | + | chr4.1:18107864-18107883 | MS.gene36506:CDS | 50.0% | |
| TTTCGATGTGTGGCACGGTA+TGG | + | chr4.1:18107537-18107556 | MS.gene36506:CDS | 50.0% | |
| ! | ATCGGCTGTTGGTGGGATTA+AGG | + | chr4.1:18105296-18105315 | MS.gene36506:CDS | 50.0% |
| ! | ATTTTCGAACCCTGCCGTGA+CGG | - | chr4.1:18106896-18106915 | None:intergenic | 50.0% |
| ! | CGCCGACCTATCTCATTTTC+CGG | + | chr4.1:18106157-18106176 | MS.gene36506:CDS | 50.0% |
| ! | GTGTAGACTAGTCCGATTCC+AGG | - | chr4.1:18107351-18107370 | None:intergenic | 50.0% |
| ! | TCATCGGTGCGATGCTGATT+GGG | - | chr4.1:18104989-18105008 | None:intergenic | 50.0% |
| !! | ATAGCGGCATTGGCTGCTAT+TGG | + | chr4.1:18104446-18104465 | MS.gene36506:intron | 50.0% |
| !! | GAGTGGTTTGCTGCATTAGC+TGG | + | chr4.1:18104481-18104500 | MS.gene36506:intron | 50.0% |
| AGGAAGAGGCAGGAAGACTC+AGG | + | chr4.1:18103680-18103699 | MS.gene36506:CDS | 55.0% | |
| AGGTCCTGCGGTCAAGTAAG+TGG | + | chr4.1:18107813-18107832 | MS.gene36506:CDS | 55.0% | |
| AGTAAGTGGCCAAACCGAGG+GGG | + | chr4.1:18107827-18107846 | MS.gene36506:CDS | 55.0% | |
| ATGGCATGGATTCTCGGGCT+TGG | + | chr4.1:18107300-18107319 | MS.gene36506:CDS | 55.0% | |
| CAAGTTCATCCCCCTCGGTT+TGG | - | chr4.1:18107839-18107858 | None:intergenic | 55.0% | |
| CCACATGTGTCTGTGTGTGC+CGG | - | chr4.1:18106403-18106422 | None:intergenic | 55.0% | |
| CCTGCATGGTAATCGGAGAC+GGG | + | chr4.1:18105131-18105150 | MS.gene36506:CDS | 55.0% | |
| CCTTCCTGTTTACACCGTCC+CGG | + | chr4.1:18107464-18107483 | MS.gene36506:CDS | 55.0% | |
| CTTCCTGCCTCTTCCTCCAT+AGG | - | chr4.1:18103676-18103695 | None:intergenic | 55.0% | |
| GAAGCTTGACCAGCCTATGG+AGG | + | chr4.1:18103660-18103679 | MS.gene36506:CDS | 55.0% | |
| GAATAACTGCAGGGACGCTG+GGG | + | chr4.1:18107866-18107885 | MS.gene36506:CDS | 55.0% | |
| GCAAGCTGTACAGCTGAGAC+CGG | - | chr4.1:18106179-18106198 | None:intergenic | 55.0% | |
| GCATAATTGGCCGAACTCCG+TGG | + | chr4.1:18105963-18105982 | MS.gene36506:intron | 55.0% | |
| GCTGGCACCTGCATGGTAAT+CGG | + | chr4.1:18105124-18105143 | MS.gene36506:CDS | 55.0% | |
| GGTCATTGAGCCCTGTGGTA+CGG | + | chr4.1:18105835-18105854 | MS.gene36506:intron | 55.0% | |
| TAACACGGACACGAGACACC+AGG | - | chr4.1:18106494-18106513 | None:intergenic | 55.0% | |
| TACCCCTGAACCGTACCACA+GGG | - | chr4.1:18105848-18105867 | None:intergenic | 55.0% | |
| TCTTCCGGGACGGTGTAAAC+AGG | - | chr4.1:18107471-18107490 | None:intergenic | 55.0% | |
| TGACCAGCCTATGGAGGAAG+AGG | + | chr4.1:18103666-18103685 | MS.gene36506:CDS | 55.0% | |
| TTACCATGCAGGTGCCAGCA+AGG | - | chr4.1:18105123-18105142 | None:intergenic | 55.0% | |
| TTACCCCTGAACCGTACCAC+AGG | - | chr4.1:18105849-18105868 | None:intergenic | 55.0% | |
| TTGGCCACTTACTTGACCGC+AGG | - | chr4.1:18107820-18107839 | None:intergenic | 55.0% | |
| TTTGCATTGCCGTCACGGCA+GGG | + | chr4.1:18106884-18106903 | MS.gene36506:CDS | 55.0% | |
| ! | CAAGGATGGACTTCCCTTGG+TGG | + | chr4.1:18105688-18105707 | MS.gene36506:CDS | 55.0% |
| ! | GGTGCGATGCTGATTGGGAA+TGG | - | chr4.1:18104984-18105003 | None:intergenic | 55.0% |
| ! | TGTCGCCTGGCTTGCAACTA+TGG | - | chr4.1:18106731-18106750 | None:intergenic | 55.0% |
| AGCCCTGTGGTACGGTTCAG+GGG | + | chr4.1:18105843-18105862 | MS.gene36506:intron | 60.0% | |
| CAGCCTATGGAGGAAGAGGC+AGG | + | chr4.1:18103670-18103689 | MS.gene36506:CDS | 60.0% | |
| CCCGTCTCCGATTACCATGC+AGG | - | chr4.1:18105134-18105153 | None:intergenic | 60.0% | |
| CCGGCACACACAGACACATG+TGG | + | chr4.1:18106400-18106419 | MS.gene36506:intron | 60.0% | |
| CCGGGACGGTGTAAACAGGA+AGG | - | chr4.1:18107467-18107486 | None:intergenic | 60.0% | |
| CGGAGACGGGATTCTTACCC+CGG | + | chr4.1:18105144-18105163 | MS.gene36506:CDS | 60.0% | |
| CTCGGGCTTGGCCCAAGTTT+AGG | + | chr4.1:18107312-18107331 | MS.gene36506:CDS | 60.0% | |
| CTGCCTCTTCCTCCATAGGC+TGG | - | chr4.1:18103672-18103691 | None:intergenic | 60.0% | |
| CTTTGCATTGCCGTCACGGC+AGG | + | chr4.1:18106883-18106902 | MS.gene36506:CDS | 60.0% | |
| GAGCCCTGTGGTACGGTTCA+GGG | + | chr4.1:18105842-18105861 | MS.gene36506:intron | 60.0% | |
| GGCAGCCATAGTTGCAAGCC+AGG | + | chr4.1:18106723-18106742 | MS.gene36506:CDS | 60.0% | |
| GGGTAGGTCATTGAGCCCTG+TGG | + | chr4.1:18105830-18105849 | MS.gene36506:intron | 60.0% | |
| GGTACTGCACTCGGAGACGT+AGG | + | chr4.1:18105941-18105960 | MS.gene36506:intron | 60.0% | |
| TATTGGTGTGGCGCTGCCAC+TGG | + | chr4.1:18107088-18107107 | MS.gene36506:CDS | 60.0% | |
| TGAGCCCTGTGGTACGGTTC+AGG | + | chr4.1:18105841-18105860 | MS.gene36506:intron | 60.0% | |
| TGTCCTTGCTGGCACCTGCA+TGG | + | chr4.1:18105117-18105136 | MS.gene36506:CDS | 60.0% | |
| ! | GTGTCTGTGTGTGCCGGTGT+TGG | - | chr4.1:18106397-18106416 | None:intergenic | 60.0% |
| TAACTGCAGGGACGCTGGGG+TGG | + | chr4.1:18107869-18107888 | MS.gene36506:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 18103595 | 18108064 | 18103595 | ID=MS.gene36506 |
| chr4.1 | mRNA | 18103595 | 18108064 | 18103595 | ID=MS.gene36506.t1;Parent=MS.gene36506 |
| chr4.1 | exon | 18103595 | 18103720 | 18103595 | ID=MS.gene36506.t1.exon1;Parent=MS.gene36506.t1 |
| chr4.1 | CDS | 18103595 | 18103720 | 18103595 | ID=cds.MS.gene36506.t1;Parent=MS.gene36506.t1 |
| chr4.1 | exon | 18103983 | 18104208 | 18103983 | ID=MS.gene36506.t1.exon2;Parent=MS.gene36506.t1 |
| chr4.1 | CDS | 18103983 | 18104208 | 18103983 | ID=cds.MS.gene36506.t1;Parent=MS.gene36506.t1 |
| chr4.1 | exon | 18104930 | 18105175 | 18104930 | ID=MS.gene36506.t1.exon3;Parent=MS.gene36506.t1 |
| chr4.1 | CDS | 18104930 | 18105175 | 18104930 | ID=cds.MS.gene36506.t1;Parent=MS.gene36506.t1 |
| chr4.1 | exon | 18105292 | 18105342 | 18105292 | ID=MS.gene36506.t1.exon4;Parent=MS.gene36506.t1 |
| chr4.1 | CDS | 18105292 | 18105342 | 18105292 | ID=cds.MS.gene36506.t1;Parent=MS.gene36506.t1 |
| chr4.1 | exon | 18105470 | 18105730 | 18105470 | ID=MS.gene36506.t1.exon5;Parent=MS.gene36506.t1 |
| chr4.1 | CDS | 18105470 | 18105730 | 18105470 | ID=cds.MS.gene36506.t1;Parent=MS.gene36506.t1 |
| chr4.1 | exon | 18106141 | 18106308 | 18106141 | ID=MS.gene36506.t1.exon6;Parent=MS.gene36506.t1 |
| chr4.1 | CDS | 18106141 | 18106308 | 18106141 | ID=cds.MS.gene36506.t1;Parent=MS.gene36506.t1 |
| chr4.1 | exon | 18106686 | 18106940 | 18106686 | ID=MS.gene36506.t1.exon7;Parent=MS.gene36506.t1 |
| chr4.1 | CDS | 18106686 | 18106940 | 18106686 | ID=cds.MS.gene36506.t1;Parent=MS.gene36506.t1 |
| chr4.1 | exon | 18107031 | 18108064 | 18107031 | ID=MS.gene36506.t1.exon8;Parent=MS.gene36506.t1 |
| chr4.1 | CDS | 18107031 | 18108064 | 18107031 | ID=cds.MS.gene36506.t1;Parent=MS.gene36506.t1 |
| Gene Sequence |
| Protein sequence |
