Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000958.t1 | XP_013463353.1 | 98.1 | 789 | 15 | 0 | 1 | 789 | 1 | 789 | 0.00E+00 | 1492.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000958.t1 | Q9SA05 | 75.9 | 785 | 187 | 2 | 6 | 789 | 13 | 796 | 0.0e+00 | 1181.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000958.t1 | A0A072V6Z7 | 98.1 | 789 | 15 | 0 | 1 | 789 | 1 | 789 | 0.0e+00 | 1492.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene073487 | MS.gene000958 | PPI |
MS.gene000958 | MS.gene36506 | PPI |
MS.gene000958 | MS.gene57440 | PPI |
MS.gene028285 | MS.gene000958 | PPI |
MS.gene036961 | MS.gene000958 | PPI |
MS.gene57439 | MS.gene000958 | PPI |
MS.gene036959 | MS.gene000958 | PPI |
MS.gene57440 | MS.gene000958 | PPI |
MS.gene023187 | MS.gene000958 | PPI |
MS.gene35174 | MS.gene000958 | PPI |
MS.gene000958 | MS.gene000957 | PPI |
MS.gene036960 | MS.gene000958 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000958.t1 | MTR_2g438150 | 98.352 | 789 | 13 | 0 | 1 | 789 | 1 | 789 | 0.0 | 1593 |
MS.gene000958.t1 | MTR_2g438150 | 97.972 | 789 | 16 | 0 | 1 | 789 | 1 | 789 | 0.0 | 1587 |
MS.gene000958.t1 | MTR_4g094660 | 81.084 | 793 | 140 | 5 | 1 | 789 | 1 | 787 | 0.0 | 1279 |
MS.gene000958.t1 | MTR_2g438160 | 95.961 | 619 | 25 | 0 | 1 | 619 | 1 | 619 | 0.0 | 1162 |
MS.gene000958.t1 | MTR_4g094660 | 79.901 | 607 | 112 | 5 | 187 | 789 | 1 | 601 | 0.0 | 949 |
MS.gene000958.t1 | MTR_6g033165 | 49.412 | 765 | 358 | 6 | 50 | 789 | 59 | 819 | 0.0 | 744 |
MS.gene000958.t1 | MTR_5g034500 | 48.601 | 786 | 376 | 9 | 28 | 789 | 1 | 782 | 0.0 | 728 |
MS.gene000958.t1 | MTR_6g007697 | 48.030 | 787 | 373 | 11 | 28 | 789 | 1 | 776 | 0.0 | 719 |
MS.gene000958.t1 | MTR_5g071860 | 45.939 | 751 | 389 | 4 | 42 | 789 | 18 | 754 | 0.0 | 711 |
MS.gene000958.t1 | MTR_3g094090 | 45.990 | 798 | 391 | 8 | 28 | 789 | 1 | 794 | 0.0 | 697 |
MS.gene000958.t1 | MTR_8g063840 | 46.461 | 777 | 396 | 8 | 26 | 789 | 71 | 840 | 0.0 | 692 |
MS.gene000958.t1 | MTR_7g108480 | 44.720 | 767 | 387 | 6 | 23 | 787 | 40 | 771 | 0.0 | 692 |
MS.gene000958.t1 | MTR_4g099260 | 44.347 | 796 | 419 | 10 | 11 | 789 | 27 | 815 | 0.0 | 661 |
MS.gene000958.t1 | MTR_2g008820 | 43.742 | 791 | 422 | 10 | 19 | 789 | 62 | 849 | 0.0 | 653 |
MS.gene000958.t1 | MTR_8g063900 | 43.056 | 792 | 372 | 10 | 9 | 787 | 18 | 743 | 0.0 | 649 |
MS.gene000958.t1 | MTR_5g071630 | 43.952 | 744 | 386 | 8 | 49 | 789 | 10 | 725 | 0.0 | 646 |
MS.gene000958.t1 | MTR_5g071827 | 45.147 | 680 | 359 | 3 | 110 | 789 | 1 | 666 | 0.0 | 641 |
MS.gene000958.t1 | MTR_8g022130 | 42.583 | 782 | 414 | 7 | 9 | 789 | 19 | 766 | 0.0 | 635 |
MS.gene000958.t1 | MTR_8g099090 | 43.040 | 783 | 404 | 10 | 41 | 789 | 18 | 792 | 0.0 | 630 |
MS.gene000958.t1 | MTR_8g088200 | 43.299 | 776 | 414 | 8 | 31 | 789 | 16 | 782 | 0.0 | 629 |
MS.gene000958.t1 | MTR_5g070670 | 43.750 | 752 | 404 | 9 | 52 | 789 | 103 | 849 | 0.0 | 622 |
MS.gene000958.t1 | MTR_8g107510 | 38.639 | 779 | 434 | 11 | 40 | 786 | 13 | 779 | 3.07e-180 | 536 |
MS.gene000958.t1 | MTR_3g094090 | 45.017 | 602 | 298 | 4 | 219 | 789 | 10 | 609 | 5.20e-177 | 522 |
MS.gene000958.t1 | MTR_5g034590 | 53.216 | 171 | 80 | 0 | 447 | 617 | 89 | 259 | 1.06e-58 | 204 |
MS.gene000958.t1 | MTR_5g034590 | 41.860 | 86 | 45 | 1 | 109 | 189 | 5 | 90 | 1.16e-13 | 73.9 |
MS.gene000958.t1 | MTR_8g022160 | 48.500 | 200 | 99 | 2 | 9 | 207 | 19 | 215 | 7.77e-55 | 190 |
MS.gene000958.t1 | MTR_2g438170 | 92.105 | 76 | 6 | 0 | 650 | 725 | 1 | 76 | 3.13e-43 | 151 |
MS.gene000958.t1 | MTR_1g029310 | 35.714 | 126 | 74 | 2 | 197 | 322 | 12 | 130 | 9.24e-19 | 83.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene000958.t1 | AT1G31120 | 76.336 | 786 | 182 | 4 | 6 | 789 | 13 | 796 | 0.0 | 1212 |
MS.gene000958.t1 | AT2G35060 | 76.493 | 787 | 175 | 7 | 6 | 789 | 13 | 792 | 0.0 | 1207 |
MS.gene000958.t1 | AT2G35060 | 76.493 | 787 | 175 | 7 | 6 | 789 | 13 | 792 | 0.0 | 1207 |
MS.gene000958.t1 | AT2G35060 | 76.493 | 787 | 175 | 7 | 6 | 789 | 13 | 792 | 0.0 | 1207 |
MS.gene000958.t1 | AT2G35060 | 76.396 | 788 | 175 | 8 | 6 | 789 | 13 | 793 | 0.0 | 1202 |
MS.gene000958.t1 | AT4G19960 | 70.291 | 791 | 223 | 4 | 10 | 789 | 18 | 807 | 0.0 | 1084 |
MS.gene000958.t1 | AT4G19960 | 68.897 | 807 | 223 | 5 | 10 | 789 | 18 | 823 | 0.0 | 1075 |
MS.gene000958.t1 | AT4G19960 | 68.054 | 817 | 223 | 5 | 10 | 789 | 18 | 833 | 0.0 | 1070 |
MS.gene000958.t1 | AT4G19960 | 69.297 | 583 | 167 | 4 | 218 | 789 | 5 | 586 | 0.0 | 797 |
MS.gene000958.t1 | AT3G02050 | 49.482 | 772 | 350 | 6 | 50 | 789 | 26 | 789 | 0.0 | 715 |
MS.gene000958.t1 | AT2G40540 | 47.103 | 794 | 388 | 7 | 28 | 789 | 1 | 794 | 0.0 | 705 |
MS.gene000958.t1 | AT2G40540 | 47.103 | 794 | 388 | 7 | 28 | 789 | 1 | 794 | 0.0 | 705 |
MS.gene000958.t1 | AT2G40540 | 47.103 | 794 | 388 | 7 | 28 | 789 | 1 | 794 | 0.0 | 705 |
MS.gene000958.t1 | AT2G40540 | 47.103 | 794 | 388 | 7 | 28 | 789 | 1 | 794 | 0.0 | 705 |
MS.gene000958.t1 | AT2G40540 | 47.103 | 794 | 388 | 7 | 28 | 789 | 1 | 794 | 0.0 | 705 |
MS.gene000958.t1 | AT5G14880 | 49.174 | 787 | 369 | 11 | 28 | 789 | 1 | 781 | 0.0 | 700 |
MS.gene000958.t1 | AT1G60160 | 45.387 | 802 | 414 | 9 | 3 | 789 | 35 | 827 | 0.0 | 699 |
MS.gene000958.t1 | AT1G70300 | 46.887 | 787 | 388 | 9 | 28 | 789 | 1 | 782 | 0.0 | 692 |
MS.gene000958.t1 | AT4G13420 | 44.360 | 789 | 414 | 9 | 8 | 787 | 11 | 783 | 0.0 | 670 |
MS.gene000958.t1 | AT2G30070 | 45.140 | 751 | 353 | 3 | 42 | 789 | 18 | 712 | 0.0 | 670 |
MS.gene000958.t1 | AT4G33530 | 44.760 | 811 | 408 | 13 | 5 | 789 | 59 | 855 | 0.0 | 662 |
MS.gene000958.t1 | AT4G23640 | 44.258 | 775 | 404 | 7 | 40 | 789 | 4 | 775 | 0.0 | 632 |
MS.gene000958.t1 | AT5G09400 | 43.580 | 810 | 422 | 12 | 5 | 789 | 59 | 858 | 0.0 | 631 |
MS.gene000958.t1 | AT2G30070 | 43.586 | 647 | 309 | 2 | 143 | 789 | 2 | 592 | 0.0 | 555 |
MS.gene000958.t1 | AT4G33530 | 45.219 | 617 | 324 | 6 | 184 | 789 | 14 | 627 | 0.0 | 545 |
Find 179 sgRNAs with CRISPR-Local
Find 295 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCTTTGGTTTCTCTTAAT+TGG | 0.103523 | 2.3:-52992243 | MS.gene000958:CDS |
CAAAGTCTTGGTGTAGTTTA+TGG | 0.148191 | 2.3:-52993432 | MS.gene000958:CDS |
TTGCTCCAATTGTTCTTCTT+TGG | 0.191203 | 2.3:-52992257 | MS.gene000958:CDS |
CGCAACTTCATTGAGTAATA+TGG | 0.207009 | 2.3:-52989616 | MS.gene000958:CDS |
TGCCTTCTTCTAGCATATTC+TGG | 0.210512 | 2.3:-52991895 | MS.gene000958:CDS |
ACAAGGAACCGCTCTTCTTC+AGG | 0.267159 | 2.3:+52989864 | None:intergenic |
TACAGATGAGACTGGAAAAT+TGG | 0.269699 | 2.3:+52991948 | None:intergenic |
GACAACACTGCTGATGATTT+TGG | 0.271661 | 2.3:-52990288 | MS.gene000958:CDS |
AAAGTAACATTCACATTTGT+TGG | 0.280547 | 2.3:+52989549 | None:intergenic |
AGATATCAATTGGATCCTTA+TGG | 0.304409 | 2.3:-52991175 | MS.gene000958:CDS |
GGAATCTTGCTTAGCATAAC+AGG | 0.312685 | 2.3:-52992102 | MS.gene000958:intron |
TTTCGGTGTGTGGCACGATA+TGG | 0.313289 | 2.3:-52989810 | MS.gene000958:CDS |
TACCGTAAGCATTTCCAATC+TGG | 0.318724 | 2.3:+52991112 | None:intergenic |
TGGTGTAGTTTATGGAGATT+TGG | 0.318941 | 2.3:-52993424 | MS.gene000958:CDS |
ATTCTTATTCTTGTCCTTGT+TGG | 0.320495 | 2.3:-52992709 | MS.gene000958:CDS |
GTTATGTATGTTTGGCATTA+CGG | 0.321291 | 2.3:-52990113 | MS.gene000958:CDS |
TTCTGGACAGGCTGCCTATC+TGG | 0.321487 | 2.3:-52991878 | MS.gene000958:CDS |
TTCTGATTGTTATGTATGTT+TGG | 0.323587 | 2.3:-52990121 | MS.gene000958:CDS |
GAAAACTCAAAGATGGTTAG+AGG | 0.330335 | 2.3:-52992755 | MS.gene000958:CDS |
TGGGCTCCCCTTGCAATTGC+CGG | 0.334267 | 2.3:-52990149 | MS.gene000958:CDS |
CAAAGGTAGTATGTGGGATT+TGG | 0.334401 | 2.3:-52993718 | MS.gene000958:CDS |
TTTCTCTTAATTGGAGGTAT+AGG | 0.338505 | 2.3:-52992234 | MS.gene000958:CDS |
GACACGGACTAGTCCTAAAC+TGG | 0.341327 | 2.3:+52990022 | None:intergenic |
ATTTACAACTTGTGGAGATT+TGG | 0.344580 | 2.3:-52992210 | MS.gene000958:CDS |
GTCTCAATGGCATGGATTCT+CGG | 0.361185 | 2.3:-52990053 | MS.gene000958:CDS |
GTTGCTGTTGTAATATTAGT+TGG | 0.362180 | 2.3:-52992327 | MS.gene000958:CDS |
ATAAGGATCCAATTGATATC+TGG | 0.365046 | 2.3:+52991177 | None:intergenic |
ATTCTTACCCCAGCTATATC+TGG | 0.365173 | 2.3:-52992661 | MS.gene000958:intron |
CTCGGGCTCGGTCCCAGTTT+AGG | 0.365770 | 2.3:-52990035 | MS.gene000958:CDS |
GGTGTAGTTTATGGAGATTT+GGG | 0.370924 | 2.3:-52993423 | MS.gene000958:CDS |
CTTTGCATTGCTGTTACTGC+TGG | 0.372984 | 2.3:-52991150 | MS.gene000958:CDS |
TGATATCTGGAATATATATC+TGG | 0.375019 | 2.3:+52991190 | None:intergenic |
ATTTCTGAGCCTTCCTGCTT+CGG | 0.381713 | 2.3:+52993668 | None:intergenic |
TCTCTCGACTGTTCGGTTTG+CGG | 0.388246 | 2.3:+52989663 | None:intergenic |
AGCATACCGCTATCAACTTC+GGG | 0.405710 | 2.3:+52992485 | None:intergenic |
AGAAACCAAAGAAGAACAAT+TGG | 0.406944 | 2.3:+52992252 | None:intergenic |
TGCGCTGTTGCTTCTACGAC+TGG | 0.410868 | 2.3:-52993460 | MS.gene000958:CDS |
CAGCCGATGGATGCCGAAGC+AGG | 0.412078 | 2.3:-52993681 | MS.gene000958:CDS |
CTTTGGTTTCTCTTAATTGG+AGG | 0.412681 | 2.3:-52992240 | MS.gene000958:CDS |
CGGTTCCTTGTCAAGCGTAT+TGG | 0.412864 | 2.3:-52989852 | MS.gene000958:CDS |
TATGAACAACTTTGACTCTT+GGG | 0.413145 | 2.3:+52991232 | None:intergenic |
TATATATTCCAGATATCAAT+TGG | 0.414516 | 2.3:-52991185 | MS.gene000958:CDS |
TGTGTTATAGAAAACGTATA+AGG | 0.415069 | 2.3:+52993392 | None:intergenic |
GTGTAGACTAGGCCGATTCC+AGG | 0.418903 | 2.3:+52989999 | None:intergenic |
GTATGAACAACTTTGACTCT+TGG | 0.424508 | 2.3:+52991231 | None:intergenic |
AATCATCGTCTTTCTTATGT+AGG | 0.434327 | 2.3:+52989778 | None:intergenic |
GATAGTTGGCTTTCCCTTGG+TGG | 0.434983 | 2.3:-52992123 | MS.gene000958:CDS |
CTGCTTCGGCATCCATCGGC+TGG | 0.435634 | 2.3:+52993682 | None:intergenic |
GTTGGTACCTGCATGGTGAT+TGG | 0.448680 | 2.3:-52992691 | MS.gene000958:CDS |
TATTAGTTTGGCACTGCCAT+TGG | 0.448736 | 2.3:-52990259 | MS.gene000958:CDS |
ACACAGTTGTGAGGGCTAGC+AGG | 0.448779 | 2.3:-52989437 | MS.gene000958:CDS |
GTTCTGCAGACAAAATATAC+TGG | 0.449577 | 2.3:-52991356 | MS.gene000958:intron |
ACCGTAAGCATTTCCAATCT+GGG | 0.450883 | 2.3:+52991113 | None:intergenic |
TCAAAATCGATCAAGGTGGC+TGG | 0.452735 | 2.3:-52990169 | MS.gene000958:CDS |
TCTCAATGGCATGGATTCTC+GGG | 0.453151 | 2.3:-52990052 | MS.gene000958:CDS |
GCTGGTGTTGTTCACATACT+AGG | 0.453676 | 2.3:-52989462 | MS.gene000958:CDS |
TCATCAGTACGATGCTGGTT+GGG | 0.455801 | 2.3:+52992829 | None:intergenic |
ACTTCTCATGGAAGGTAGTC+CGG | 0.459359 | 2.3:+52992788 | None:intergenic |
ATTATATATATGCATTCCTT+AGG | 0.459689 | 2.3:-52989383 | MS.gene000958:CDS |
TGCAGTTGTGTTAGTCATGC+TGG | 0.464198 | 2.3:-52990312 | MS.gene000958:CDS |
GATGATCCGGAGAAAGTGAT+TGG | 0.464873 | 2.3:-52993354 | MS.gene000958:CDS |
CATGAAATCTCTCGACTGTT+CGG | 0.470466 | 2.3:+52989656 | None:intergenic |
CAAGGAACCGCTCTTCTTCA+GGG | 0.472960 | 2.3:+52989865 | None:intergenic |
AACGTTGCAATTACAAATAC+CGG | 0.473663 | 2.3:+52991333 | None:intergenic |
ATGCAAGTTATTCACCAGAT+AGG | 0.475330 | 2.3:+52991864 | None:intergenic |
ATGATAACAAAGGTAGTATG+TGG | 0.475636 | 2.3:-52993725 | MS.gene000958:CDS |
TTAAACACCTGTAGAGAAGC+TGG | 0.476644 | 2.3:-52989480 | MS.gene000958:CDS |
TCTTCTAGCATATTCTGGAC+AGG | 0.485505 | 2.3:-52991890 | MS.gene000958:CDS |
TACAACTTGTGGAGATTTGG+TGG | 0.485551 | 2.3:-52992207 | MS.gene000958:CDS |
ATTCTCGTTGTTGTGTTCAC+CGG | 0.486407 | 2.3:-52990236 | MS.gene000958:CDS |
CTATTCAGCATACAACGTTA+TGG | 0.487468 | 2.3:-52992303 | MS.gene000958:CDS |
TCCTCGTGGAGTTGATGATC+CGG | 0.491615 | 2.3:-52993367 | MS.gene000958:CDS |
TTTCTCTGCATATCTTCCTA+AGG | 0.491872 | 2.3:+52989367 | None:intergenic |
TTAGGACTAGTCCGTGTCCC+TGG | 0.492338 | 2.3:-52990017 | MS.gene000958:CDS |
CGAGTCGAACAAACATGAAA+AGG | 0.493469 | 2.3:+52989733 | None:intergenic |
GAGCATACCGCTATCAACTT+CGG | 0.495328 | 2.3:+52992484 | None:intergenic |
TTGCTGCGAAAACTCAAAGA+TGG | 0.496057 | 2.3:-52992762 | MS.gene000958:CDS |
AGAGCTCCAATCACTTTCTC+CGG | 0.496201 | 2.3:+52993348 | None:intergenic |
AAAGATAGTTGGCTTTCCCT+TGG | 0.497018 | 2.3:-52992126 | MS.gene000958:CDS |
TCGCAGCAAATGACTTCTCA+TGG | 0.498295 | 2.3:+52992776 | None:intergenic |
TGTTCGACTCGAGTCAATGA+TGG | 0.502377 | 2.3:-52989721 | MS.gene000958:CDS |
ACATTTGTTGGAGATCTAGC+AGG | 0.502401 | 2.3:+52989561 | None:intergenic |
GTCAATGATGGAAGGTTGCT+CGG | 0.502606 | 2.3:-52989709 | MS.gene000958:CDS |
CACCGGCTTATCATTGATTG+TGG | 0.505639 | 2.3:-52990219 | MS.gene000958:CDS |
CTAGTCCGTGTCCCTGGAAT+CGG | 0.505874 | 2.3:-52990011 | MS.gene000958:CDS |
GTGTTATAGAAAACGTATAA+GGG | 0.507909 | 2.3:+52993393 | None:intergenic |
ATGGCATGGATTCTCGGGCT+CGG | 0.509081 | 2.3:-52990047 | MS.gene000958:CDS |
TGTCCTTGTTGGTACCTGCA+TGG | 0.511921 | 2.3:-52992698 | MS.gene000958:CDS |
AACAACACCAGCTTCTCTAC+AGG | 0.514171 | 2.3:+52989473 | None:intergenic |
ATCTGCTGCTGGTGGCATCA+AGG | 0.516150 | 2.3:-52992516 | MS.gene000958:CDS |
AACAAGGACAAGAATAAGAA+TGG | 0.518388 | 2.3:+52992711 | None:intergenic |
GAAAACATACCAGATATAGC+TGG | 0.518840 | 2.3:+52992652 | None:intergenic |
CTTCCTGCTTCGGCATCCAT+CGG | 0.521217 | 2.3:+52993678 | None:intergenic |
TTTCACCTCTCTACGTGTAT+CGG | 0.523357 | 2.3:-52992167 | MS.gene000958:CDS |
ACCCAGATTGGAAATGCTTA+CGG | 0.523974 | 2.3:-52991114 | MS.gene000958:intron |
CAGCAATGCAAAGAACCATA+AGG | 0.526000 | 2.3:+52991160 | None:intergenic |
ATTAAGCAAGCCCTTGCTCA+TGG | 0.527966 | 2.3:-52991261 | MS.gene000958:CDS |
TCTTCAGGGACTGTGTAGAC+AGG | 0.528620 | 2.3:+52989879 | None:intergenic |
GCTCTTCATCAGTACGATGC+TGG | 0.528803 | 2.3:+52992824 | None:intergenic |
CACAGTTGTGAGGGCTAGCA+GGG | 0.531697 | 2.3:-52989436 | MS.gene000958:CDS |
CAAAATCGATCAAGGTGGCT+GGG | 0.532334 | 2.3:-52990168 | MS.gene000958:CDS |
GAGACGGAGGCAAAGATAGT+TGG | 0.533135 | 2.3:-52992137 | MS.gene000958:CDS |
ATTGCATAGCAAAGTCTCAA+TGG | 0.534181 | 2.3:-52990066 | MS.gene000958:CDS |
TAATGAAATGAGAAAATATG+TGG | 0.534737 | 2.3:+52989955 | None:intergenic |
GAAATACTCCGGCAATTGCA+AGG | 0.535693 | 2.3:+52990141 | None:intergenic |
AAAACATACCAGATATAGCT+GGG | 0.539177 | 2.3:+52992653 | None:intergenic |
GTACTCTTCAAAATCGATCA+AGG | 0.539760 | 2.3:-52990176 | MS.gene000958:CDS |
TTCATCAGTACGATGCTGGT+TGG | 0.539824 | 2.3:+52992828 | None:intergenic |
GACTGGAAAATTGGCCAAGT+CGG | 0.540019 | 2.3:+52991957 | None:intergenic |
GCAATTTGTACAGATGAGAC+TGG | 0.550134 | 2.3:+52991940 | None:intergenic |
TTCCACAATCAATGATAAGC+CGG | 0.550969 | 2.3:+52990217 | None:intergenic |
GGCTTGCTTAATGATTGAAA+AGG | 0.551030 | 2.3:+52991272 | None:intergenic |
CATGAGAGTCTCTTAAATGT+TGG | 0.554708 | 2.3:-52989321 | MS.gene000958:CDS |
CGACTGGCATATCAAAGTCT+TGG | 0.555965 | 2.3:-52993444 | MS.gene000958:CDS |
CATACATCAAAGAAATTCCT+CGG | 0.556726 | 2.3:-52991213 | MS.gene000958:CDS |
GTATAGGTATTTACAACTTG+TGG | 0.557069 | 2.3:-52992218 | MS.gene000958:CDS |
ATACACGTAGAGAGGTGAAA+AGG | 0.557618 | 2.3:+52992170 | None:intergenic |
TGAAAAGGTTGCCGTGATTG+TGG | 0.558261 | 2.3:+52991287 | None:intergenic |
GTCCAGAATATGCTAGAAGA+AGG | 0.563204 | 2.3:+52991893 | None:intergenic |
GTCTACACAGAGCTTGCAAG+TGG | 0.564596 | 2.3:-52989984 | MS.gene000958:CDS |
CTGGAATATATATCTGGCCG+AGG | 0.565446 | 2.3:+52991196 | None:intergenic |
TTGGGAAACATCCATGAGCA+AGG | 0.566397 | 2.3:+52991250 | None:intergenic |
ACAACAACGGAATGGATCGC+TGG | 0.570518 | 2.3:+52989924 | None:intergenic |
ATTTGCATGTCGGCAGAGCA+AGG | 0.572919 | 2.3:+52992864 | None:intergenic |
GATTTCATGTTGAATAACAA+TGG | 0.574262 | 2.3:-52989642 | MS.gene000958:CDS |
AGGTTGCCGTGATTGTGGCT+TGG | 0.574303 | 2.3:+52991292 | None:intergenic |
TTGCAAGCTCTGTGTAGACT+AGG | 0.574990 | 2.3:+52989988 | None:intergenic |
AAATACTCCGGCAATTGCAA+GGG | 0.576131 | 2.3:+52990142 | None:intergenic |
TGCAGACAAAATATACTGGC+CGG | 0.579100 | 2.3:-52991352 | MS.gene000958:intron |
TGATAACAAAGGTAGTATGT+GGG | 0.583248 | 2.3:-52993724 | MS.gene000958:CDS |
CAACGGAATGGATCGCTGGT+AGG | 0.584685 | 2.3:+52989928 | None:intergenic |
AAACGAAAACAACAACGGAA+TGG | 0.585282 | 2.3:+52989916 | None:intergenic |
TGTTACAGGAGTAGTTGTGC+TGG | 0.586547 | 2.3:-52992349 | MS.gene000958:intron |
ATGGTACAGATAGAGTTGGT+TGG | 0.587725 | 2.3:-52992284 | MS.gene000958:CDS |
CATAACAATCAGAAATACTC+CGG | 0.589596 | 2.3:+52990130 | None:intergenic |
CGATGGATGCCGAAGCAGGA+AGG | 0.589706 | 2.3:-52993677 | MS.gene000958:CDS |
ACAAATTGCATTTACTCTCG+TGG | 0.590570 | 2.3:-52991926 | MS.gene000958:CDS |
GAATATGCTAGAAGAAGGCA+AGG | 0.591990 | 2.3:+52991898 | None:intergenic |
ACCGTCTCCAATCACCATGC+AGG | 0.592811 | 2.3:+52992684 | None:intergenic |
TTCTATAACACATTTCCTCG+TGG | 0.594788 | 2.3:-52993381 | MS.gene000958:CDS |
CTATGGAGCAGGTGGAACGC+TGG | 0.596080 | 2.3:-52992896 | MS.gene000958:intron |
CGTTATGGTACAGATAGAGT+TGG | 0.598043 | 2.3:-52992288 | MS.gene000958:CDS |
GATGAAGAAAATGATAACAA+AGG | 0.598368 | 2.3:-52993735 | MS.gene000958:CDS |
AGCAAATGACTTCTCATGGA+AGG | 0.600279 | 2.3:+52992780 | None:intergenic |
GTATGTTTGGCATTACGGAA+CGG | 0.603324 | 2.3:-52990108 | MS.gene000958:CDS |
AGAGCAAATGACAATGGTCA+AGG | 0.604083 | 2.3:-52993264 | MS.gene000958:intron |
AAGAGCTGACAACATATAGC+CGG | 0.606530 | 2.3:-52992807 | MS.gene000958:CDS |
TTGGTCCAATACGCTTGACA+AGG | 0.615523 | 2.3:+52989847 | None:intergenic |
TGCAAGCCAAGCCACAATCA+CGG | 0.618452 | 2.3:-52991298 | MS.gene000958:CDS |
ACAGAAACTTGACCAGCCGA+TGG | 0.619273 | 2.3:-52993694 | MS.gene000958:CDS |
TGGGAAACATCCATGAGCAA+GGG | 0.620410 | 2.3:+52991251 | None:intergenic |
GCTAAGCAAGATTCCACCAA+GGG | 0.622974 | 2.3:+52992110 | None:intergenic |
ACTAGGAAACACAGTTGTGA+GGG | 0.624736 | 2.3:-52989445 | MS.gene000958:CDS |
CTAGGCCGATTCCAGGGACA+CGG | 0.628200 | 2.3:+52990006 | None:intergenic |
AAAACTCAAAGATGGTTAGA+GGG | 0.628361 | 2.3:-52992754 | MS.gene000958:CDS |
TGTAGACTAGGCCGATTCCA+GGG | 0.629843 | 2.3:+52990000 | None:intergenic |
ACCTGCATGGTGATTGGAGA+CGG | 0.633928 | 2.3:-52992685 | MS.gene000958:CDS |
TACTAGGAAACACAGTTGTG+AGG | 0.636832 | 2.3:-52989446 | MS.gene000958:CDS |
CGACTCGAGTCAATGATGGA+AGG | 0.639714 | 2.3:-52989717 | MS.gene000958:CDS |
GACACAAACGAAAACAACAA+CGG | 0.645561 | 2.3:+52989911 | None:intergenic |
ATAGCAAAGTCTCAATGGCA+TGG | 0.650531 | 2.3:-52990061 | MS.gene000958:CDS |
AATGAAATGAGAAAATATGT+GGG | 0.652566 | 2.3:+52989956 | None:intergenic |
AATACTCCGGCAATTGCAAG+GGG | 0.655579 | 2.3:+52990143 | None:intergenic |
TCACCATGCAGGTACCAACA+AGG | 0.662761 | 2.3:+52992695 | None:intergenic |
GTGTATCGGTATCTAAGAGA+CGG | 0.666148 | 2.3:-52992153 | MS.gene000958:CDS |
AGATACCGATACACGTAGAG+AGG | 0.668284 | 2.3:+52992162 | None:intergenic |
ATGAAAACGTATTTGAGCAG+CGG | 0.669648 | 2.3:+52993294 | None:intergenic |
AACAAACCCGAAGTTGATAG+CGG | 0.675102 | 2.3:-52992491 | MS.gene000958:intron |
ACACAACAACGAGAATCCAA+TGG | 0.682411 | 2.3:+52990243 | None:intergenic |
GTATTAAGAGCAAATGACAA+TGG | 0.692297 | 2.3:-52993270 | MS.gene000958:CDS |
TGCTAAGCAAGATTCCACCA+AGG | 0.701088 | 2.3:+52992109 | None:intergenic |
ACACGGACTAGTCCTAAACT+GGG | 0.702716 | 2.3:+52990023 | None:intergenic |
ATGAAATGAGAAAATATGTG+GGG | 0.706454 | 2.3:+52989957 | None:intergenic |
ACACAGTCCCTGAAGAAGAG+CGG | 0.707844 | 2.3:-52989872 | MS.gene000958:CDS |
AAACATACCAGATATAGCTG+GGG | 0.711575 | 2.3:+52992654 | None:intergenic |
TATCGGTATCTAAGAGACGG+AGG | 0.713726 | 2.3:-52992150 | MS.gene000958:CDS |
ACATTTAAGAGACTCTCATG+AGG | 0.718347 | 2.3:+52989324 | None:intergenic |
CTCTTCAAAATCGATCAAGG+TGG | 0.740278 | 2.3:-52990173 | MS.gene000958:CDS |
TCCGGATCATCAACTCCACG+AGG | 0.743190 | 2.3:+52993366 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAACATGAAAAAAAA+TGG | + | chr2.3:52991999-52992018 | None:intergenic | 10.0% |
!! | AAGAAATAAATTTATTAGAA+TGG | - | chr2.3:52992022-52992041 | MS.gene000958:intron | 10.0% |
!! | ATTCTAAGTAAAAATAATAG+AGG | + | chr2.3:52991624-52991643 | None:intergenic | 15.0% |
!! | TTAGTATATCATAAACTTAT+TGG | - | chr2.3:52991592-52991611 | MS.gene000958:intron | 15.0% |
!! | TTCTAAGTAAAAATAATAGA+GGG | + | chr2.3:52991623-52991642 | None:intergenic | 15.0% |
!! | TTGAAAAAATTTCTACAAAA+AGG | + | chr2.3:52990489-52990508 | None:intergenic | 15.0% |
!! | AATCATTACGACATTAAAAA+GGG | - | chr2.3:52992130-52992149 | MS.gene000958:CDS | 20.0% |
!! | AATGAAATGAGAAAATATGT+GGG | + | chr2.3:52993105-52993124 | None:intergenic | 20.0% |
!! | AATTATCTAGTATATCTTCT+TGG | + | chr2.3:52992654-52992673 | None:intergenic | 20.0% |
!! | AGAGAAAATGTATATATGTA+GGG | + | chr2.3:52992478-52992497 | None:intergenic | 20.0% |
!! | ATTATATATATGCATTCCTT+AGG | - | chr2.3:52993675-52993694 | MS.gene000958:CDS | 20.0% |
!! | TAATCATTACGACATTAAAA+AGG | - | chr2.3:52992129-52992148 | MS.gene000958:CDS | 20.0% |
!! | TAATGAAATGAGAAAATATG+TGG | + | chr2.3:52993106-52993125 | None:intergenic | 20.0% |
!! | TAGAGAAAATGTATATATGT+AGG | + | chr2.3:52992479-52992498 | None:intergenic | 20.0% |
!! | TATATATTCCAGATATCAAT+TGG | - | chr2.3:52991873-52991892 | MS.gene000958:CDS | 20.0% |
!! | TGCCTTAAAATTATTCAATA+AGG | - | chr2.3:52991015-52991034 | MS.gene000958:intron | 20.0% |
!! | TTGAATATTGAATTACTTTG+AGG | + | chr2.3:52991318-52991337 | None:intergenic | 20.0% |
!!! | AAAAAGTGTAACGTAATTAA+GGG | - | chr2.3:52992355-52992374 | MS.gene000958:intron | 20.0% |
!!! | CACCTTATTGAATAATTTTA+AGG | + | chr2.3:52991020-52991039 | None:intergenic | 20.0% |
!!! | TGATTTTTATATTTGCATGT+CGG | + | chr2.3:52990207-52990226 | None:intergenic | 20.0% |
!!! | TTAATGTATGTTAAAAGTGT+AGG | + | chr2.3:52990599-52990618 | None:intergenic | 20.0% |
!!! | TTTGGTTAATTTGGATATTA+TGG | - | chr2.3:52989837-52989856 | MS.gene000958:CDS | 20.0% |
! | AAAGGAAAGTCAAAAATGAA+AGG | + | chr2.3:52990471-52990490 | None:intergenic | 25.0% |
! | AAAGTAACATTCACATTTGT+TGG | + | chr2.3:52993512-52993531 | None:intergenic | 25.0% |
! | AAAGTTGACAAAAAAGAAGA+AGG | - | chr2.3:52991377-52991396 | MS.gene000958:intron | 25.0% |
! | AAATTATTCAATAAGGTGAG+CGG | - | chr2.3:52991022-52991041 | MS.gene000958:intron | 25.0% |
! | AAGTAGATACAATACAAAGT+AGG | - | chr2.3:52991467-52991486 | MS.gene000958:intron | 25.0% |
! | ACATTGAAAATTTGCAACAT+AGG | - | chr2.3:52992103-52992122 | MS.gene000958:CDS | 25.0% |
! | AGTAGATACAATACAAAGTA+GGG | - | chr2.3:52991468-52991487 | MS.gene000958:intron | 25.0% |
! | AGTTCTTAAACTTTGTTAAC+TGG | + | chr2.3:52992679-52992698 | None:intergenic | 25.0% |
! | ATGAAATGAGAAAATATGTG+GGG | + | chr2.3:52993104-52993123 | None:intergenic | 25.0% |
! | CAATGTAAAGAAATTAGGAA+AGG | + | chr2.3:52992156-52992175 | None:intergenic | 25.0% |
! | CCTAATTTCTTTACATTGAA+GGG | - | chr2.3:52992158-52992177 | MS.gene000958:CDS | 25.0% |
! | CTATAATCTCATATACATAG+TGG | + | chr2.3:52990635-52990654 | None:intergenic | 25.0% |
! | GAATTCAGAAAAAGCAAAAA+TGG | + | chr2.3:52989453-52989472 | None:intergenic | 25.0% |
! | GATGAAGAAAATGATAACAA+AGG | - | chr2.3:52989323-52989342 | MS.gene000958:CDS | 25.0% |
! | GATTCAAAATGAGATTTATG+TGG | - | chr2.3:52991443-52991462 | MS.gene000958:intron | 25.0% |
! | GATTTCATGTTGAATAACAA+TGG | - | chr2.3:52993416-52993435 | MS.gene000958:CDS | 25.0% |
! | GTGTTATAGAAAACGTATAA+GGG | + | chr2.3:52989668-52989687 | None:intergenic | 25.0% |
! | TAACTTCGTCCTTAAATATA+GGG | - | chr2.3:52992193-52992212 | MS.gene000958:CDS | 25.0% |
! | TAGGATCCTATATTTAGAAA+CGG | - | chr2.3:52992446-52992465 | MS.gene000958:intron | 25.0% |
! | TCCTAATTTCTTTACATTGA+AGG | - | chr2.3:52992157-52992176 | MS.gene000958:CDS | 25.0% |
! | TGTGTTATAGAAAACGTATA+AGG | + | chr2.3:52989669-52989688 | None:intergenic | 25.0% |
! | TTCTGATTGTTATGTATGTT+TGG | - | chr2.3:52992937-52992956 | MS.gene000958:intron | 25.0% |
! | TTTAAAAATCAAACCCAGAT+TGG | - | chr2.3:52991932-52991951 | MS.gene000958:CDS | 25.0% |
!! | CAAAGAATTACCACATTTTT+CGG | - | chr2.3:52993231-52993250 | MS.gene000958:intron | 25.0% |
!! | GAAAAAGTGTAACGTAATTA+AGG | - | chr2.3:52992354-52992373 | MS.gene000958:intron | 25.0% |
!! | GTTAATTTGGATATTATGGT+TGG | - | chr2.3:52989841-52989860 | MS.gene000958:CDS | 25.0% |
!! | TAACGTAATTAAGGGTATAT+TGG | - | chr2.3:52992363-52992382 | MS.gene000958:intron | 25.0% |
!! | TGATATCTGGAATATATATC+TGG | + | chr2.3:52991871-52991890 | None:intergenic | 25.0% |
!! | TTTTCTTCATCAATCTCTAA+CGG | + | chr2.3:52989314-52989333 | None:intergenic | 25.0% |
!! | TTTTGGTCATGATATTAGTT+TGG | - | chr2.3:52992787-52992806 | MS.gene000958:CDS | 25.0% |
!! | TTTTGTCAACTTTGTATAGT+TGG | + | chr2.3:52991370-52991389 | None:intergenic | 25.0% |
!!! | ATAGTTTCGAGTTTTTTCAT+TGG | - | chr2.3:52990651-52990670 | MS.gene000958:intron | 25.0% |
!!! | TTGTTTTTCAGAAGCTATTT+TGG | - | chr2.3:52989970-52989989 | MS.gene000958:CDS | 25.0% |
AAAACATACCAGATATAGCT+GGG | + | chr2.3:52990408-52990427 | None:intergenic | 30.0% | |
AAAACTCAAAGATGGTTAGA+GGG | - | chr2.3:52990304-52990323 | MS.gene000958:CDS | 30.0% | |
AACAAGGACAAGAATAAGAA+TGG | + | chr2.3:52990350-52990369 | None:intergenic | 30.0% | |
AACGTTGCAATTACAAATAC+CGG | + | chr2.3:52991728-52991747 | None:intergenic | 30.0% | |
ACCTGCACTAAATACTATTA+TGG | + | chr2.3:52992330-52992349 | None:intergenic | 30.0% | |
AGAAACCAAAGAAGAACAAT+TGG | + | chr2.3:52990809-52990828 | None:intergenic | 30.0% | |
AGATATCAATTGGATCCTTA+TGG | - | chr2.3:52991883-52991902 | MS.gene000958:CDS | 30.0% | |
ATAAGGATCCAATTGATATC+TGG | + | chr2.3:52991884-52991903 | None:intergenic | 30.0% | |
ATCCAAATTAACCAAACAGT+TGG | + | chr2.3:52989833-52989852 | None:intergenic | 30.0% | |
ATCCTATATTTAGAAACGGA+GGG | - | chr2.3:52992450-52992469 | MS.gene000958:intron | 30.0% | |
ATGATAACAAAGGTAGTATG+TGG | - | chr2.3:52989333-52989352 | MS.gene000958:CDS | 30.0% | |
ATGCAGCTGAAAATTTAAAG+TGG | - | chr2.3:52992400-52992419 | MS.gene000958:intron | 30.0% | |
ATTCTTATTCTTGTCCTTGT+TGG | - | chr2.3:52990349-52990368 | MS.gene000958:intron | 30.0% | |
ATTTACAACTTGTGGAGATT+TGG | - | chr2.3:52990848-52990867 | MS.gene000958:intron | 30.0% | |
CATAACAATCAGAAATACTC+CGG | + | chr2.3:52992931-52992950 | None:intergenic | 30.0% | |
CATACATCAAAGAAATTCCT+CGG | - | chr2.3:52991845-52991864 | MS.gene000958:CDS | 30.0% | |
CCCTTCAATGTAAAGAAATT+AGG | + | chr2.3:52992161-52992180 | None:intergenic | 30.0% | |
CGAAAAATGTGGTAATTCTT+TGG | + | chr2.3:52993233-52993252 | None:intergenic | 30.0% | |
CTAACTTCGTCCTTAAATAT+AGG | - | chr2.3:52992192-52992211 | MS.gene000958:CDS | 30.0% | |
GAATTTATCCTTGTAATGAC+AGG | - | chr2.3:52992720-52992739 | MS.gene000958:CDS | 30.0% | |
GAGGATATGAAATCATCTAA+AGG | - | chr2.3:52992066-52992085 | MS.gene000958:intron | 30.0% | |
GCCTTTAGCATTTATTGAAT+CGG | - | chr2.3:52989922-52989941 | MS.gene000958:CDS | 30.0% | |
GCTGAACATAACTAACTTAA+CGG | - | chr2.3:52992618-52992637 | MS.gene000958:intron | 30.0% | |
GGAGGAAGTAACAAATAAAT+AGG | + | chr2.3:52990450-52990469 | None:intergenic | 30.0% | |
GTATAGGTATTTACAACTTG+TGG | - | chr2.3:52990840-52990859 | MS.gene000958:intron | 30.0% | |
GTATTAAGAGCAAATGACAA+TGG | - | chr2.3:52989788-52989807 | MS.gene000958:CDS | 30.0% | |
GTTATGTATGTTTGGCATTA+CGG | - | chr2.3:52992945-52992964 | MS.gene000958:intron | 30.0% | |
TATGAACAACTTTGACTCTT+GGG | + | chr2.3:52991829-52991848 | None:intergenic | 30.0% | |
TATGATATACTAAACACCAC+AGG | + | chr2.3:52991585-52991604 | None:intergenic | 30.0% | |
TATGTTCAGCTATTCTGTTT+CGG | + | chr2.3:52992608-52992627 | None:intergenic | 30.0% | |
TCCATAATAGTATTTAGTGC+AGG | - | chr2.3:52992326-52992345 | MS.gene000958:CDS | 30.0% | |
TGATAACAAAGGTAGTATGT+GGG | - | chr2.3:52989334-52989353 | MS.gene000958:CDS | 30.0% | |
TTAAAGTGGGCCTATAAAAA+GGG | - | chr2.3:52992414-52992433 | MS.gene000958:intron | 30.0% | |
TTCCAACTGTTTGGTTAATT+TGG | - | chr2.3:52989828-52989847 | MS.gene000958:CDS | 30.0% | |
TTTAACCAAGCTTACATCTA+TGG | - | chr2.3:52990145-52990164 | MS.gene000958:CDS | 30.0% | |
! | ACCGATTCAATAAATGCTAA+AGG | + | chr2.3:52989926-52989945 | None:intergenic | 30.0% |
! | ATATCTGGTATGTTTTCTGT+CGG | - | chr2.3:52990412-52990431 | MS.gene000958:intron | 30.0% |
! | ATATTTTGTCTGCAGAACTA+AGG | + | chr2.3:52991700-52991719 | None:intergenic | 30.0% |
! | CAATGATTTTTATCTGTCAG+AGG | - | chr2.3:52991666-52991685 | MS.gene000958:intron | 30.0% |
! | CTTCTTTGGTTTCTCTTAAT+TGG | - | chr2.3:52990815-52990834 | MS.gene000958:intron | 30.0% |
! | GTTGCTGTTGTAATATTAGT+TGG | - | chr2.3:52990731-52990750 | MS.gene000958:intron | 30.0% |
! | TGCAGCTGAAAATTTAAAGT+GGG | - | chr2.3:52992401-52992420 | MS.gene000958:intron | 30.0% |
! | TGTATTGTTTTCCAACTGTT+TGG | - | chr2.3:52989819-52989838 | MS.gene000958:CDS | 30.0% |
! | TGTGGAATGCACATATTTTT+CGG | - | chr2.3:52992857-52992876 | MS.gene000958:CDS | 30.0% |
! | TTACAATGACTTTGTTTGAG+TGG | + | chr2.3:52990095-52990114 | None:intergenic | 30.0% |
! | TTTAAAGTGGGCCTATAAAA+AGG | - | chr2.3:52992413-52992432 | MS.gene000958:intron | 30.0% |
! | TTTCTCTTAATTGGAGGTAT+AGG | - | chr2.3:52990824-52990843 | MS.gene000958:intron | 30.0% |
AAACATACCAGATATAGCTG+GGG | + | chr2.3:52990407-52990426 | None:intergenic | 35.0% | |
AAACGAAAACAACAACGGAA+TGG | + | chr2.3:52993145-52993164 | None:intergenic | 35.0% | |
AAACTTATCATCTCTCCTCA+AGG | + | chr2.3:52992301-52992320 | None:intergenic | 35.0% | |
AAGGTGGATACACTAAGTTT+AGG | - | chr2.3:52991396-52991415 | MS.gene000958:intron | 35.0% | |
ACAAATTGCATTTACTCTCG+TGG | - | chr2.3:52991132-52991151 | MS.gene000958:CDS | 35.0% | |
ACATTTAAGAGACTCTCATG+AGG | + | chr2.3:52993737-52993756 | None:intergenic | 35.0% | |
AGAAAGTAAGCGTTCATTTC+TGG | + | chr2.3:52992525-52992544 | None:intergenic | 35.0% | |
ATAAAAAGGGACTGGGAAAT+AGG | - | chr2.3:52992427-52992446 | MS.gene000958:intron | 35.0% | |
ATGAAAACGTATTTGAGCAG+CGG | + | chr2.3:52989767-52989786 | None:intergenic | 35.0% | |
ATGCAAGTTATTCACCAGAT+AGG | + | chr2.3:52991197-52991216 | None:intergenic | 35.0% | |
ATTGCATAGCAAAGTCTCAA+TGG | - | chr2.3:52992992-52993011 | MS.gene000958:intron | 35.0% | |
CATGAGAGTCTCTTAAATGT+TGG | - | chr2.3:52993737-52993756 | MS.gene000958:CDS | 35.0% | |
CATTACAAGGATAAATTCGC+TGG | + | chr2.3:52992718-52992737 | None:intergenic | 35.0% | |
CGCAACTTCATTGAGTAATA+TGG | - | chr2.3:52993442-52993461 | MS.gene000958:CDS | 35.0% | |
CGCATGTTGTCTATAAAAGT+GGG | - | chr2.3:52992556-52992575 | MS.gene000958:intron | 35.0% | |
CTATTCAGCATACAACGTTA+TGG | - | chr2.3:52990755-52990774 | MS.gene000958:intron | 35.0% | |
GAAAACATACCAGATATAGC+TGG | + | chr2.3:52990409-52990428 | None:intergenic | 35.0% | |
GAAAACTCAAAGATGGTTAG+AGG | - | chr2.3:52990303-52990322 | MS.gene000958:CDS | 35.0% | |
GACACAAACGAAAACAACAA+CGG | + | chr2.3:52993150-52993169 | None:intergenic | 35.0% | |
GATCCTATATTTAGAAACGG+AGG | - | chr2.3:52992449-52992468 | MS.gene000958:intron | 35.0% | |
GGAAAGTCAAAAATGAAAGG+AGG | + | chr2.3:52990468-52990487 | None:intergenic | 35.0% | |
GGTGTAGTTTATGGAGATTT+GGG | - | chr2.3:52989635-52989654 | MS.gene000958:CDS | 35.0% | |
GTACTCTTCAAAATCGATCA+AGG | - | chr2.3:52992882-52992901 | MS.gene000958:CDS | 35.0% | |
GTATGAACAACTTTGACTCT+TGG | + | chr2.3:52991830-52991849 | None:intergenic | 35.0% | |
GTTCTGCAGACAAAATATAC+TGG | - | chr2.3:52991702-52991721 | MS.gene000958:intron | 35.0% | |
GTTGACAAAAAAGAAGAAGG+TGG | - | chr2.3:52991380-52991399 | MS.gene000958:intron | 35.0% | |
GTTGACGATAAACTGCATAT+TGG | + | chr2.3:52992503-52992522 | None:intergenic | 35.0% | |
TACAGATGAGACTGGAAAAT+TGG | + | chr2.3:52991113-52991132 | None:intergenic | 35.0% | |
TCGCATGTTGTCTATAAAAG+TGG | - | chr2.3:52992555-52992574 | MS.gene000958:intron | 35.0% | |
TGGATATTATGGTTGGACTA+AGG | - | chr2.3:52989848-52989867 | MS.gene000958:CDS | 35.0% | |
TGGTGTAGTTTATGGAGATT+TGG | - | chr2.3:52989634-52989653 | MS.gene000958:CDS | 35.0% | |
TGTGACAGATATAACAAACC+TGG | + | chr2.3:52991250-52991269 | None:intergenic | 35.0% | |
TTCCACAATCAATGATAAGC+CGG | + | chr2.3:52992844-52992863 | None:intergenic | 35.0% | |
TTCTATAACACATTTCCTCG+TGG | - | chr2.3:52989677-52989696 | MS.gene000958:CDS | 35.0% | |
TTGCTCCAATTGTTCTTCTT+TGG | - | chr2.3:52990801-52990820 | MS.gene000958:intron | 35.0% | |
TTTCTCTGCATATCTTCCTA+AGG | + | chr2.3:52993694-52993713 | None:intergenic | 35.0% | |
! | AACTTGTGACGATTGATTTC+AGG | - | chr2.3:52991061-52991080 | MS.gene000958:intron | 35.0% |
! | ACTTGTGACGATTGATTTCA+GGG | - | chr2.3:52991062-52991081 | MS.gene000958:intron | 35.0% |
! | ATTTCCCAGTCCCTTTTTAT+AGG | + | chr2.3:52992427-52992446 | None:intergenic | 35.0% |
! | CAAAGTCTTGGTGTAGTTTA+TGG | - | chr2.3:52989626-52989645 | MS.gene000958:CDS | 35.0% |
! | CTTTGGTTTCTCTTAATTGG+AGG | - | chr2.3:52990818-52990837 | MS.gene000958:intron | 35.0% |
! | GGCTTGCTTAATGATTGAAA+AGG | + | chr2.3:52991789-52991808 | None:intergenic | 35.0% |
! | GTGTTTTATCGTTCTATTCC+AGG | - | chr2.3:52991229-52991248 | MS.gene000958:CDS | 35.0% |
!!! | GTGAAAAGGCTTTTAAGACA+CGG | + | chr2.3:52990877-52990896 | None:intergenic | 35.0% |
AAATACTCCGGCAATTGCAA+GGG | + | chr2.3:52992919-52992938 | None:intergenic | 40.0% | |
AAGAGCTGACAACATATAGC+CGG | - | chr2.3:52990251-52990270 | MS.gene000958:CDS | 40.0% | |
ACACAACAACGAGAATCCAA+TGG | + | chr2.3:52992818-52992837 | None:intergenic | 40.0% | |
ACCCAGATTGGAAATGCTTA+CGG | - | chr2.3:52991944-52991963 | MS.gene000958:CDS | 40.0% | |
ACCGTAAGCATTTCCAATCT+GGG | + | chr2.3:52991948-52991967 | None:intergenic | 40.0% | |
ACTAGGAAACACAGTTGTGA+GGG | - | chr2.3:52993613-52993632 | MS.gene000958:intron | 40.0% | |
AGAGAAATGCAACTTGTAGG+AGG | - | chr2.3:52992047-52992066 | MS.gene000958:intron | 40.0% | |
AGAGCAAATGACAATGGTCA+AGG | - | chr2.3:52989794-52989813 | MS.gene000958:CDS | 40.0% | |
AGCAAATGACTTCTCATGGA+AGG | + | chr2.3:52990281-52990300 | None:intergenic | 40.0% | |
ATACACGTAGAGAGGTGAAA+AGG | + | chr2.3:52990891-52990910 | None:intergenic | 40.0% | |
ATAGCAAAGTCTCAATGGCA+TGG | - | chr2.3:52992997-52993016 | MS.gene000958:intron | 40.0% | |
ATTCTCGTTGTTGTGTTCAC+CGG | - | chr2.3:52992822-52992841 | MS.gene000958:CDS | 40.0% | |
ATTCTTACCCCAGCTATATC+TGG | - | chr2.3:52990397-52990416 | MS.gene000958:intron | 40.0% | |
CAAAGGTAGTATGTGGGATT+TGG | - | chr2.3:52989340-52989359 | MS.gene000958:CDS | 40.0% | |
CAGCAATGCAAAGAACCATA+AGG | + | chr2.3:52991901-52991920 | None:intergenic | 40.0% | |
CATGAAATCTCTCGACTGTT+CGG | + | chr2.3:52993405-52993424 | None:intergenic | 40.0% | |
CATTTGATTGATTGCACCTG+TGG | - | chr2.3:52991566-52991585 | MS.gene000958:intron | 40.0% | |
CGAGTCGAACAAACATGAAA+AGG | + | chr2.3:52993328-52993347 | None:intergenic | 40.0% | |
CGTTATGGTACAGATAGAGT+TGG | - | chr2.3:52990770-52990789 | MS.gene000958:intron | 40.0% | |
CTCCCTCCGTTTCTAAATAT+AGG | + | chr2.3:52992455-52992474 | None:intergenic | 40.0% | |
CTCTTCAAAATCGATCAAGG+TGG | - | chr2.3:52992885-52992904 | MS.gene000958:CDS | 40.0% | |
CTTTCTTACTTCCCGTGATT+TGG | + | chr2.3:52992227-52992246 | None:intergenic | 40.0% | |
GAATATGCTAGAAGAAGGCA+AGG | + | chr2.3:52991163-52991182 | None:intergenic | 40.0% | |
GCAATTTGTACAGATGAGAC+TGG | + | chr2.3:52991121-52991140 | None:intergenic | 40.0% | |
GGAATCTTGCTTAGCATAAC+AGG | - | chr2.3:52990956-52990975 | MS.gene000958:intron | 40.0% | |
GGTGCAATCAATCAAATGCA+TGG | + | chr2.3:52991564-52991583 | None:intergenic | 40.0% | |
GTATGTTTGGCATTACGGAA+CGG | - | chr2.3:52992950-52992969 | MS.gene000958:intron | 40.0% | |
GTCAACGAGCCCTATATTTA+AGG | + | chr2.3:52992205-52992224 | None:intergenic | 40.0% | |
GTCCAGAATATGCTAGAAGA+AGG | + | chr2.3:52991168-52991187 | None:intergenic | 40.0% | |
GTTTCGCAAGTTTATCCTTG+AGG | - | chr2.3:52992283-52992302 | MS.gene000958:CDS | 40.0% | |
TACAACTTGTGGAGATTTGG+TGG | - | chr2.3:52990851-52990870 | MS.gene000958:intron | 40.0% | |
TACCGTAAGCATTTCCAATC+TGG | + | chr2.3:52991949-52991968 | None:intergenic | 40.0% | |
TACTAGGAAACACAGTTGTG+AGG | - | chr2.3:52993612-52993631 | MS.gene000958:intron | 40.0% | |
TCTTCTAGCATATTCTGGAC+AGG | - | chr2.3:52991168-52991187 | MS.gene000958:CDS | 40.0% | |
TGCAGACAAAATATACTGGC+CGG | - | chr2.3:52991706-52991725 | MS.gene000958:intron | 40.0% | |
TGCCTTCTTCTAGCATATTC+TGG | - | chr2.3:52991163-52991182 | MS.gene000958:CDS | 40.0% | |
TTAAACACCTGTAGAGAAGC+TGG | - | chr2.3:52993578-52993597 | MS.gene000958:intron | 40.0% | |
TTGATGCAAGAGTAAGAGAG+TGG | - | chr2.3:52989887-52989906 | MS.gene000958:CDS | 40.0% | |
TTGCTGCGAAAACTCAAAGA+TGG | - | chr2.3:52990296-52990315 | MS.gene000958:CDS | 40.0% | |
TTTCACCTCTCTACGTGTAT+CGG | - | chr2.3:52990891-52990910 | MS.gene000958:intron | 40.0% | |
! | ACATTTGTTGGAGATCTAGC+AGG | + | chr2.3:52993500-52993519 | None:intergenic | 40.0% |
! | ATGGTACAGATAGAGTTGGT+TGG | - | chr2.3:52990774-52990793 | MS.gene000958:intron | 40.0% |
! | GACAACACTGCTGATGATTT+TGG | - | chr2.3:52992770-52992789 | MS.gene000958:CDS | 40.0% |
! | GTAAGTTTTTCGCTTGCAGA+AGG | - | chr2.3:52991966-52991985 | MS.gene000958:CDS | 40.0% |
! | GTGTATCGGTATCTAAGAGA+CGG | - | chr2.3:52990905-52990924 | MS.gene000958:intron | 40.0% |
! | TAACACCATGGCGGAAAAAA+GGG | + | chr2.3:52990694-52990713 | None:intergenic | 40.0% |
! | TATTAGTTTGGCACTGCCAT+TGG | - | chr2.3:52992799-52992818 | MS.gene000958:CDS | 40.0% |
! | TTTTTCCCTTTTTTCCGCCA+TGG | - | chr2.3:52990686-52990705 | MS.gene000958:intron | 40.0% |
!! | AAAGATAGTTGGCTTTCCCT+TGG | - | chr2.3:52990932-52990951 | MS.gene000958:intron | 40.0% |
!! | AACAAACCCGAAGTTGATAG+CGG | - | chr2.3:52990567-52990586 | MS.gene000958:intron | 40.0% |
!! | TTACCACATTTTTCGGTGTG+TGG | - | chr2.3:52993238-52993257 | MS.gene000958:intron | 40.0% |
!!! | GATGTAGTTTTATCTGCTGC+TGG | - | chr2.3:52990531-52990550 | MS.gene000958:intron | 40.0% |
AACAACACCAGCTTCTCTAC+AGG | + | chr2.3:52993588-52993607 | None:intergenic | 45.0% | |
AATACTCCGGCAATTGCAAG+GGG | + | chr2.3:52992918-52992937 | None:intergenic | 45.0% | |
ACTTCTCATGGAAGGTAGTC+CGG | + | chr2.3:52990273-52990292 | None:intergenic | 45.0% | |
AGAGCTCCAATCACTTTCTC+CGG | + | chr2.3:52989713-52989732 | None:intergenic | 45.0% | |
AGATACCGATACACGTAGAG+AGG | + | chr2.3:52990899-52990918 | None:intergenic | 45.0% | |
AGCATACCGCTATCAACTTC+GGG | + | chr2.3:52990576-52990595 | None:intergenic | 45.0% | |
ATTAAGCAAGCCCTTGCTCA+TGG | - | chr2.3:52991797-52991816 | MS.gene000958:intron | 45.0% | |
ATTTCTGAGCCTTCCTGCTT+CGG | + | chr2.3:52989393-52989412 | None:intergenic | 45.0% | |
CAAAATCGATCAAGGTGGCT+GGG | - | chr2.3:52992890-52992909 | MS.gene000958:intron | 45.0% | |
CAACTACTCCTGTAACACCA+TGG | + | chr2.3:52990706-52990725 | None:intergenic | 45.0% | |
CAAGCTTACATCTATGGAGC+AGG | - | chr2.3:52990151-52990170 | MS.gene000958:CDS | 45.0% | |
CGACTGGCATATCAAAGTCT+TGG | - | chr2.3:52989614-52989633 | MS.gene000958:CDS | 45.0% | |
CTGCTCCATAGATGTAAGCT+TGG | + | chr2.3:52990153-52990172 | None:intergenic | 45.0% | |
CTGGAATATATATCTGGCCG+AGG | + | chr2.3:52991865-52991884 | None:intergenic | 45.0% | |
GAAATACTCCGGCAATTGCA+AGG | + | chr2.3:52992920-52992939 | None:intergenic | 45.0% | |
GACTGGAAAATTGGCCAAGT+CGG | + | chr2.3:52991104-52991123 | None:intergenic | 45.0% | |
GAGCATACCGCTATCAACTT+CGG | + | chr2.3:52990577-52990596 | None:intergenic | 45.0% | |
GATGATCCGGAGAAAGTGAT+TGG | - | chr2.3:52989704-52989723 | MS.gene000958:CDS | 45.0% | |
GCGAGAGAAATGCAACTTGT+AGG | - | chr2.3:52992044-52992063 | MS.gene000958:intron | 45.0% | |
GCTAAGCAAGATTCCACCAA+GGG | + | chr2.3:52990951-52990970 | None:intergenic | 45.0% | |
GTCTCAATGGCATGGATTCT+CGG | - | chr2.3:52993005-52993024 | MS.gene000958:intron | 45.0% | |
TATCGGTATCTAAGAGACGG+AGG | - | chr2.3:52990908-52990927 | MS.gene000958:intron | 45.0% | |
TCAAAATCGATCAAGGTGGC+TGG | - | chr2.3:52992889-52992908 | MS.gene000958:intron | 45.0% | |
TCGCAGCAAATGACTTCTCA+TGG | + | chr2.3:52990285-52990304 | None:intergenic | 45.0% | |
TCTCAATGGCATGGATTCTC+GGG | - | chr2.3:52993006-52993025 | MS.gene000958:intron | 45.0% | |
TGAAAAGGTTGCCGTGATTG+TGG | + | chr2.3:52991774-52991793 | None:intergenic | 45.0% | |
TGCAGTTGTGTTAGTCATGC+TGG | - | chr2.3:52992746-52992765 | MS.gene000958:CDS | 45.0% | |
TGCTAAGCAAGATTCCACCA+AGG | + | chr2.3:52990952-52990971 | None:intergenic | 45.0% | |
TGGGAAACATCCATGAGCAA+GGG | + | chr2.3:52991810-52991829 | None:intergenic | 45.0% | |
TGGGCCTATAAAAAGGGACT+GGG | - | chr2.3:52992420-52992439 | MS.gene000958:intron | 45.0% | |
TGTTACAGGAGTAGTTGTGC+TGG | - | chr2.3:52990709-52990728 | MS.gene000958:intron | 45.0% | |
TTCATCAGTACGATGCTGGT+TGG | + | chr2.3:52990233-52990252 | None:intergenic | 45.0% | |
TTGCAAGCTCTGTGTAGACT+AGG | + | chr2.3:52993073-52993092 | None:intergenic | 45.0% | |
TTGGGAAACATCCATGAGCA+AGG | + | chr2.3:52991811-52991830 | None:intergenic | 45.0% | |
TTGGTCCAATACGCTTGACA+AGG | + | chr2.3:52993214-52993233 | None:intergenic | 45.0% | |
! | CTTTGCATTGCTGTTACTGC+TGG | - | chr2.3:52991908-52991927 | MS.gene000958:CDS | 45.0% |
! | GTAACACCATGGCGGAAAAA+AGG | + | chr2.3:52990695-52990714 | None:intergenic | 45.0% |
! | GTCAATGATGGAAGGTTGCT+CGG | - | chr2.3:52993349-52993368 | MS.gene000958:CDS | 45.0% |
! | TCATCAGTACGATGCTGGTT+GGG | + | chr2.3:52990232-52990251 | None:intergenic | 45.0% |
! | TGTTCGACTCGAGTCAATGA+TGG | - | chr2.3:52993337-52993356 | MS.gene000958:CDS | 45.0% |
!! | ACACGGACTAGTCCTAAACT+GGG | + | chr2.3:52993038-52993057 | None:intergenic | 45.0% |
!! | AGAAGCTCTTTTTGCCGACT+TGG | - | chr2.3:52991087-52991106 | MS.gene000958:intron | 45.0% |
!! | CACCGGCTTATCATTGATTG+TGG | - | chr2.3:52992839-52992858 | MS.gene000958:CDS | 45.0% |
!! | GCTGGTGTTGTTCACATACT+AGG | - | chr2.3:52993596-52993615 | MS.gene000958:intron | 45.0% |
!!! | GTAGTTTTATCTGCTGCTGG+TGG | - | chr2.3:52990534-52990553 | MS.gene000958:intron | 45.0% |
!!! | TTTTTCCGCCATGGTGTTAC+AGG | - | chr2.3:52990695-52990714 | MS.gene000958:intron | 45.0% |
ACAACAACGGAATGGATCGC+TGG | + | chr2.3:52993137-52993156 | None:intergenic | 50.0% | |
ACAAGGAACCGCTCTTCTTC+AGG | + | chr2.3:52993197-52993216 | None:intergenic | 50.0% | |
ACACAGTCCCTGAAGAAGAG+CGG | - | chr2.3:52993186-52993205 | MS.gene000958:intron | 50.0% | |
ACAGAAACTTGACCAGCCGA+TGG | - | chr2.3:52989364-52989383 | MS.gene000958:CDS | 50.0% | |
ACCTGCATGGTGATTGGAGA+CGG | - | chr2.3:52990373-52990392 | MS.gene000958:intron | 50.0% | |
AGGGCTCGTTGACCAAATCA+CGG | - | chr2.3:52992212-52992231 | MS.gene000958:CDS | 50.0% | |
ATTTGCATGTCGGCAGAGCA+AGG | + | chr2.3:52990197-52990216 | None:intergenic | 50.0% | |
CAAGGAACCGCTCTTCTTCA+GGG | + | chr2.3:52993196-52993215 | None:intergenic | 50.0% | |
CGGTTCCTTGTCAAGCGTAT+TGG | - | chr2.3:52993206-52993225 | MS.gene000958:intron | 50.0% | |
CTACTCCTGTAACACCATGG+CGG | + | chr2.3:52990703-52990722 | None:intergenic | 50.0% | |
CTGCAGTGCCTGTCATTACA+AGG | + | chr2.3:52992731-52992750 | None:intergenic | 50.0% | |
GAGACGGAGGCAAAGATAGT+TGG | - | chr2.3:52990921-52990940 | MS.gene000958:intron | 50.0% | |
GCTCTTCATCAGTACGATGC+TGG | + | chr2.3:52990237-52990256 | None:intergenic | 50.0% | |
GCTTACATCTATGGAGCAGG+TGG | - | chr2.3:52990154-52990173 | MS.gene000958:CDS | 50.0% | |
GTCTACACAGAGCTTGCAAG+TGG | - | chr2.3:52993074-52993093 | MS.gene000958:intron | 50.0% | |
GTGCCACACACCGAAAAATG+TGG | + | chr2.3:52993244-52993263 | None:intergenic | 50.0% | |
GTGGGCCTATAAAAAGGGAC+TGG | - | chr2.3:52992419-52992438 | MS.gene000958:intron | 50.0% | |
GTTGGTACCTGCATGGTGAT+TGG | - | chr2.3:52990367-52990386 | MS.gene000958:intron | 50.0% | |
TCACCATGCAGGTACCAACA+AGG | + | chr2.3:52990366-52990385 | None:intergenic | 50.0% | |
TCTTCAGGGACTGTGTAGAC+AGG | + | chr2.3:52993182-52993201 | None:intergenic | 50.0% | |
TGCAAGCCAAGCCACAATCA+CGG | - | chr2.3:52991760-52991779 | MS.gene000958:intron | 50.0% | |
TGTCCTTGTTGGTACCTGCA+TGG | - | chr2.3:52990360-52990379 | MS.gene000958:intron | 50.0% | |
! | CGACTCGAGTCAATGATGGA+AGG | - | chr2.3:52993341-52993360 | MS.gene000958:CDS | 50.0% |
! | TCTCTCGACTGTTCGGTTTG+CGG | + | chr2.3:52993398-52993417 | None:intergenic | 50.0% |
! | TGTAGACTAGGCCGATTCCA+GGG | + | chr2.3:52993061-52993080 | None:intergenic | 50.0% |
! | TTTCGGTGTGTGGCACGATA+TGG | - | chr2.3:52993248-52993267 | MS.gene000958:intron | 50.0% |
!! | GACACGGACTAGTCCTAAAC+TGG | + | chr2.3:52993039-52993058 | None:intergenic | 50.0% |
!! | GATAGTTGGCTTTCCCTTGG+TGG | - | chr2.3:52990935-52990954 | MS.gene000958:intron | 50.0% |
!! | TCCTCGTGGAGTTGATGATC+CGG | - | chr2.3:52989691-52989710 | MS.gene000958:CDS | 50.0% |
ACCGTCTCCAATCACCATGC+AGG | + | chr2.3:52990377-52990396 | None:intergenic | 55.0% | |
AGGTTGCCGTGATTGTGGCT+TGG | + | chr2.3:52991769-52991788 | None:intergenic | 55.0% | |
ATCTGCTGCTGGTGGCATCA+AGG | - | chr2.3:52990542-52990561 | MS.gene000958:intron | 55.0% | |
ATGGCATGGATTCTCGGGCT+CGG | - | chr2.3:52993011-52993030 | MS.gene000958:intron | 55.0% | |
CAACGGAATGGATCGCTGGT+AGG | + | chr2.3:52993133-52993152 | None:intergenic | 55.0% | |
CTAGTCCGTGTCCCTGGAAT+CGG | - | chr2.3:52993047-52993066 | MS.gene000958:intron | 55.0% | |
CTTCCTGCTTCGGCATCCAT+CGG | + | chr2.3:52989383-52989402 | None:intergenic | 55.0% | |
GGGCTCGTTGACCAAATCAC+GGG | - | chr2.3:52992213-52992232 | MS.gene000958:CDS | 55.0% | |
TCCGGATCATCAACTCCACG+AGG | + | chr2.3:52989695-52989714 | None:intergenic | 55.0% | |
TTCTGGACAGGCTGCCTATC+TGG | - | chr2.3:52991180-52991199 | MS.gene000958:CDS | 55.0% | |
! | ACACAGTTGTGAGGGCTAGC+AGG | - | chr2.3:52993621-52993640 | MS.gene000958:intron | 55.0% |
! | CACAGTTGTGAGGGCTAGCA+GGG | - | chr2.3:52993622-52993641 | MS.gene000958:intron | 55.0% |
! | GTGTAGACTAGGCCGATTCC+AGG | + | chr2.3:52993062-52993081 | None:intergenic | 55.0% |
! | TGCGCTGTTGCTTCTACGAC+TGG | - | chr2.3:52989598-52989617 | MS.gene000958:CDS | 55.0% |
!! | TTAGGACTAGTCCGTGTCCC+TGG | - | chr2.3:52993041-52993060 | MS.gene000958:intron | 55.0% |
CGATGGATGCCGAAGCAGGA+AGG | - | chr2.3:52989381-52989400 | MS.gene000958:CDS | 60.0% | |
CTATGGAGCAGGTGGAACGC+TGG | - | chr2.3:52990162-52990181 | MS.gene000958:CDS | 60.0% | |
TGGGCTCCCCTTGCAATTGC+CGG | - | chr2.3:52992909-52992928 | MS.gene000958:intron | 60.0% | |
! | CTAGGCCGATTCCAGGGACA+CGG | + | chr2.3:52993055-52993074 | None:intergenic | 60.0% |
CAGCCGATGGATGCCGAAGC+AGG | - | chr2.3:52989377-52989396 | MS.gene000958:CDS | 65.0% | |
CTGCTTCGGCATCCATCGGC+TGG | + | chr2.3:52989379-52989398 | None:intergenic | 65.0% | |
! | CTCGGGCTCGGTCCCAGTTT+AGG | - | chr2.3:52993023-52993042 | MS.gene000958:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 52989302 | 52993778 | 52989302 | ID=MS.gene000958 |
chr2.3 | mRNA | 52989302 | 52993778 | 52989302 | ID=MS.gene000958.t1;Parent=MS.gene000958 |
chr2.3 | exon | 52993653 | 52993778 | 52993653 | ID=MS.gene000958.t1.exon1;Parent=MS.gene000958.t1 |
chr2.3 | CDS | 52993653 | 52993778 | 52993653 | ID=cds.MS.gene000958.t1;Parent=MS.gene000958.t1 |
chr2.3 | exon | 52993265 | 52993490 | 52993265 | ID=MS.gene000958.t1.exon2;Parent=MS.gene000958.t1 |
chr2.3 | CDS | 52993265 | 52993490 | 52993265 | ID=cds.MS.gene000958.t1;Parent=MS.gene000958.t1 |
chr2.3 | exon | 52992662 | 52992907 | 52992662 | ID=MS.gene000958.t1.exon3;Parent=MS.gene000958.t1 |
chr2.3 | CDS | 52992662 | 52992907 | 52992662 | ID=cds.MS.gene000958.t1;Parent=MS.gene000958.t1 |
chr2.3 | exon | 52992492 | 52992542 | 52992492 | ID=MS.gene000958.t1.exon4;Parent=MS.gene000958.t1 |
chr2.3 | CDS | 52992492 | 52992542 | 52992492 | ID=cds.MS.gene000958.t1;Parent=MS.gene000958.t1 |
chr2.3 | exon | 52992103 | 52992363 | 52992103 | ID=MS.gene000958.t1.exon5;Parent=MS.gene000958.t1 |
chr2.3 | CDS | 52992103 | 52992363 | 52992103 | ID=cds.MS.gene000958.t1;Parent=MS.gene000958.t1 |
chr2.3 | exon | 52991830 | 52991997 | 52991830 | ID=MS.gene000958.t1.exon6;Parent=MS.gene000958.t1 |
chr2.3 | CDS | 52991830 | 52991997 | 52991830 | ID=cds.MS.gene000958.t1;Parent=MS.gene000958.t1 |
chr2.3 | exon | 52991115 | 52991369 | 52991115 | ID=MS.gene000958.t1.exon7;Parent=MS.gene000958.t1 |
chr2.3 | CDS | 52991115 | 52991369 | 52991115 | ID=cds.MS.gene000958.t1;Parent=MS.gene000958.t1 |
chr2.3 | exon | 52989302 | 52990338 | 52989302 | ID=MS.gene000958.t1.exon8;Parent=MS.gene000958.t1 |
chr2.3 | CDS | 52989302 | 52990338 | 52989302 | ID=cds.MS.gene000958.t1;Parent=MS.gene000958.t1 |
Gene Sequence |
Protein sequence |