AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028285

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028285.t1 MTR_4g094660 99.112 788 6 1 1 788 1 787 0.0 1605
MS.gene028285.t1 MTR_2g438150 81.589 793 137 5 1 788 1 789 0.0 1306
MS.gene028285.t1 MTR_2g438150 81.337 793 139 5 1 788 1 789 0.0 1301
MS.gene028285.t1 MTR_4g094660 99.003 602 5 1 187 788 1 601 0.0 1219
MS.gene028285.t1 MTR_2g438160 82.229 619 110 0 1 619 1 619 0.0 1019
MS.gene028285.t1 MTR_6g033165 48.889 765 361 4 50 788 59 819 0.0 741
MS.gene028285.t1 MTR_5g034500 47.014 787 386 10 28 788 1 782 0.0 711
MS.gene028285.t1 MTR_5g071860 46.286 754 381 7 42 788 18 754 0.0 707
MS.gene028285.t1 MTR_6g007697 45.362 787 393 10 28 788 1 776 0.0 697
MS.gene028285.t1 MTR_3g094090 46.500 800 383 12 28 788 1 794 0.0 689
MS.gene028285.t1 MTR_7g108480 44.256 766 391 5 23 786 40 771 0.0 688
MS.gene028285.t1 MTR_8g063840 46.488 783 386 10 26 788 71 840 0.0 684
MS.gene028285.t1 MTR_4g099260 45.761 802 396 12 12 788 28 815 0.0 674
MS.gene028285.t1 MTR_2g008820 45.256 780 404 9 22 788 80 849 0.0 669
MS.gene028285.t1 MTR_8g063900 42.802 771 373 5 22 786 35 743 0.0 655
MS.gene028285.t1 MTR_5g071630 44.177 747 379 10 49 788 10 725 0.0 645
MS.gene028285.t1 MTR_5g070670 44.887 753 393 8 52 788 103 849 0.0 640
MS.gene028285.t1 MTR_8g099090 44.231 780 398 8 41 788 18 792 0.0 637
MS.gene028285.t1 MTR_5g071827 45.388 683 352 6 110 788 1 666 0.0 636
MS.gene028285.t1 MTR_8g088200 42.677 792 420 9 18 788 4 782 0.0 627
MS.gene028285.t1 MTR_8g022130 42.038 785 413 10 9 788 19 766 0.0 620
MS.gene028285.t1 MTR_8g107510 38.889 774 438 13 40 785 13 779 6.00e-179 533
MS.gene028285.t1 MTR_3g094090 45.108 603 295 7 219 788 10 609 5.95e-172 509
MS.gene028285.t1 MTR_5g034590 49.123 171 87 0 447 617 89 259 4.33e-54 191
MS.gene028285.t1 MTR_5g034590 44.186 86 43 1 109 189 5 90 3.66e-15 78.6
MS.gene028285.t1 MTR_8g022160 48.500 200 99 2 9 207 19 215 1.06e-51 181
MS.gene028285.t1 MTR_1g029310 39.683 126 69 2 197 322 12 130 2.33e-21 90.9
MS.gene028285.t1 MTR_2g438170 58.025 81 25 5 650 725 1 77 3.72e-15 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028285.t1 AT1G31120 76.090 803 170 7 1 788 1 796 0.0 1199
MS.gene028285.t1 AT2G35060 75.250 800 178 6 1 788 1 792 0.0 1194
MS.gene028285.t1 AT2G35060 75.250 800 178 6 1 788 1 792 0.0 1194
MS.gene028285.t1 AT2G35060 75.250 800 178 6 1 788 1 792 0.0 1194
MS.gene028285.t1 AT2G35060 75.156 801 178 7 1 788 1 793 0.0 1189
MS.gene028285.t1 AT4G19960 68.148 810 233 5 1 788 1 807 0.0 1063
MS.gene028285.t1 AT4G19960 66.828 826 233 6 1 788 1 823 0.0 1054
MS.gene028285.t1 AT4G19960 66.029 836 233 6 1 788 1 833 0.0 1050
MS.gene028285.t1 AT4G19960 67.402 589 175 3 214 788 1 586 0.0 780
MS.gene028285.t1 AT2G40540 47.296 795 384 9 28 788 1 794 0.0 704
MS.gene028285.t1 AT2G40540 47.296 795 384 9 28 788 1 794 0.0 704
MS.gene028285.t1 AT2G40540 47.296 795 384 9 28 788 1 794 0.0 704
MS.gene028285.t1 AT2G40540 47.296 795 384 9 28 788 1 794 0.0 704
MS.gene028285.t1 AT2G40540 47.296 795 384 9 28 788 1 794 0.0 704
MS.gene028285.t1 AT1G60160 44.678 808 418 9 2 788 28 827 0.0 698
MS.gene028285.t1 AT3G02050 47.155 791 385 6 27 788 3 789 0.0 697
MS.gene028285.t1 AT5G14880 47.804 774 372 10 42 788 13 781 0.0 691
MS.gene028285.t1 AT1G70300 45.420 786 400 8 28 788 1 782 0.0 683
MS.gene028285.t1 AT4G13420 44.697 792 414 7 4 786 7 783 0.0 679
MS.gene028285.t1 AT4G33530 45.365 809 407 10 4 788 58 855 0.0 670
MS.gene028285.t1 AT2G30070 51.320 606 292 1 42 644 18 623 0.0 657
MS.gene028285.t1 AT2G30070 38.961 77 47 0 712 788 636 712 1.14e-11 68.9
MS.gene028285.t1 AT5G09400 46.065 775 399 8 30 788 87 858 0.0 650
MS.gene028285.t1 AT4G23640 44.948 772 386 9 49 788 11 775 0.0 637
MS.gene028285.t1 AT4G33530 45.779 616 323 4 183 788 13 627 0.0 548
MS.gene028285.t1 AT2G30070 50.398 502 249 0 143 644 2 503 0.0 539
MS.gene028285.t1 AT2G30070 38.961 77 47 0 712 788 516 592 9.07e-12 68.9

Find 191 sgRNAs with CRISPR-Local

Find 391 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGAGTCTTGGCGTCGTTTA+TGG 0.154578 4.2:+17230202 MS.gene028285:CDS
ATCGGCTGTTGGTGGGATTA+AGG 0.255722 4.2:+17231873 MS.gene028285:CDS
ACAAGGTATCTCTCTTCTTC+CGG 0.262164 4.2:-17234059 None:intergenic
GCTGGGGTGGTTCACATATT+AGG 0.271225 4.2:+17234458 MS.gene028285:CDS
ATTCTTATTCTTGTCCTTGC+TGG 0.272064 4.2:+17231683 MS.gene028285:CDS
ATTATATATATGCATTTCTT+AGG 0.280181 4.2:+17234537 MS.gene028285:CDS
TGTCGCCTGGCTTGCAACTA+TGG 0.292518 4.2:-17233304 None:intergenic
TTGCTCCAATTGTCCTCCTT+TGG 0.298318 4.2:+17232131 MS.gene028285:CDS
TGGCGTCGTTTATGGAGATT+TGG 0.304079 4.2:+17230210 MS.gene028285:CDS
TCAGATGAATACAGTTTATA+TGG 0.316978 4.2:+17234239 MS.gene028285:CDS
CTCCTTTGGTTTCTCCTAAT+AGG 0.317007 4.2:+17232145 MS.gene028285:CDS
TTGCAGCAAATGACCTTTCA+TGG 0.321779 4.2:-17231616 None:intergenic
CAAAGGTAGTATGTGGGATT+TGG 0.334401 4.2:+17229805 MS.gene028285:CDS
CTTTGCATTGCCGTCACGGC+CGG 0.336383 4.2:+17233459 MS.gene028285:CDS
CTCGGGCTTGGCCCAAGTTT+AGG 0.337026 4.2:+17233888 MS.gene028285:CDS
TCGTCGGTGCGATGCTGATT+GGG 0.339536 4.2:-17231563 None:intergenic
CAAGGTATCTCTCTTCTTCC+GGG 0.346404 4.2:-17234058 None:intergenic
TTGAATAACTGCAGGGATGC+TGG 0.348315 4.2:+17234440 MS.gene028285:CDS
TACCATAAGCATTTCCAATC+TGG 0.350786 4.2:-17233497 None:intergenic
TTCGTCGGTGCGATGCTGAT+TGG 0.352200 4.2:-17231564 None:intergenic
TGTCTGTGCCATAATGTTGC+AGG 0.356956 4.2:-17232093 None:intergenic
ATTCTTACCCCGGCTATATC+AGG 0.357397 4.2:+17231731 MS.gene028285:CDS
CGAAAGATGTGGTAATTCTT+AGG 0.358981 4.2:-17234095 None:intergenic
ATATTTAACATCTGTAAGTA+TGG 0.359612 4.2:+17232178 MS.gene028285:CDS
TATATAGTCCAGATATCAAT+TGG 0.360279 4.2:+17233424 MS.gene028285:CDS
ATATACCAATACCTCCTATT+AGG 0.365604 4.2:-17232159 None:intergenic
AACCAGATTGGAAATGCTTA+TGG 0.368806 4.2:+17233495 MS.gene028285:CDS
ATTATGTTTGTCTGGCATTA+CGG 0.372759 4.2:+17233810 MS.gene028285:CDS
TGATATCTGGACTATATATC+TGG 0.373074 4.2:-17233419 None:intergenic
GTCTCGATGGCATGGATTCT+CGG 0.378294 4.2:+17233870 MS.gene028285:CDS
ATAAGGACCCAATTGATATC+TGG 0.383547 4.2:-17233432 None:intergenic
GGAACATACCATTACTCATA+TGG 0.384347 4.2:-17231906 None:intergenic
TGGGTTCCTCTTGTAATTGC+CGG 0.384804 4.2:+17233774 MS.gene028285:CDS
ATGGCATGGATTCTCGGGCT+TGG 0.385857 4.2:+17233876 MS.gene028285:CDS
GGTATCATGCTCAGTATAAC+AGG 0.392216 4.2:+17232286 MS.gene028285:CDS
GGCGTCGTTTATGGAGATTT+GGG 0.402244 4.2:+17230211 MS.gene028285:CDS
TTAGGACTTGTTCGTGTACC+TGG 0.405042 4.2:+17233906 MS.gene028285:CDS
GATTATCTACTCTCTTACCT+TGG 0.406143 4.2:+17230315 MS.gene028285:CDS
TCTTCATCTTTCACACCGTT+CGG 0.408337 4.2:-17230268 None:intergenic
AATGAGTCAAGTTATTCATA+AGG 0.411947 4.2:-17232836 None:intergenic
ATTGCTGTTGTAATATTAGT+TGG 0.412164 4.2:+17232061 MS.gene028285:CDS
GTGTAGACTAGTCCGATTCC+AGG 0.417435 4.2:-17233924 None:intergenic
AAATAGTGATATATGTAAAC+AGG 0.422030 4.2:-17232226 None:intergenic
TTTCTCCTAATAGGAGGTAT+TGG 0.422505 4.2:+17232154 MS.gene028285:CDS
AGAAACCAAAGGAGGACAAT+TGG 0.429550 4.2:-17232136 None:intergenic
TCTTCCGGGACGGTGTAAAC+AGG 0.434145 4.2:-17234044 None:intergenic
ACTCTTCGTCTTTCTTGTGC+AGG 0.434280 4.2:-17234145 None:intergenic
GCTGGCACCTGCATGGTAAT+CGG 0.439778 4.2:+17231701 MS.gene028285:CDS
TCTCGATGGCATGGATTCTC+GGG 0.451131 4.2:+17233871 MS.gene028285:CDS
GTATATACAACTTTAACTCT+AGG 0.455200 4.2:-17233378 None:intergenic
CTTCCTGCCTCTTCCTCCAT+AGG 0.455502 4.2:-17229845 None:intergenic
GTGATAACAAAGGTAGTATG+TGG 0.456986 4.2:+17229798 MS.gene028285:CDS
GATTCTTTGCATTGCCGTCA+CGG 0.457533 4.2:+17233455 MS.gene028285:CDS
GGCAGCCATAGTTGCAAGCC+AGG 0.457567 4.2:+17233299 MS.gene028285:CDS
CTAACAGTGATATTCACATT+TGG 0.460145 4.2:-17234368 None:intergenic
CAAATGTGAATATCACTGTT+AGG 0.464701 4.2:+17234369 MS.gene028285:CDS
TATTGGTGTGGCGCTGCCAC+TGG 0.464822 4.2:+17233664 MS.gene028285:CDS
ATATCATGATTAAAATCATA+AGG 0.466363 4.2:-17233644 None:intergenic
CTGCCTCTTCCTCCATAGGC+TGG 0.471158 4.2:-17229841 None:intergenic
TTCGAAAATCAAAACCAGAT+TGG 0.474622 4.2:+17233483 MS.gene028285:CDS
TGACCAGCCTATGGAGGAAG+AGG 0.478610 4.2:+17229838 MS.gene028285:CDS
GAACATACCATTACTCATAT+GGG 0.479647 4.2:-17231905 None:intergenic
TCAAAGTTAATCAAGGTGGA+TGG 0.480215 4.2:+17233754 MS.gene028285:CDS
CTTGTTCGTGTACCTGGAAT+CGG 0.484864 4.2:+17233912 MS.gene028285:CDS
AGATACCTTGTAAAGAGGAT+TGG 0.486463 4.2:+17234071 MS.gene028285:CDS
TTTCGATGTGTGGCACGGTA+TGG 0.488737 4.2:+17234113 MS.gene028285:CDS
CGGCTTGCATATCAGAGTCT+TGG 0.492350 4.2:+17230190 MS.gene028285:CDS
CCCGTCTCCGATTACCATGC+AGG 0.492534 4.2:-17231708 None:intergenic
CATTTCTTAGGAAAATATGC+AGG 0.492742 4.2:+17234549 MS.gene028285:CDS
TTTGCATTGCCGTCACGGCC+GGG 0.493895 4.2:+17233460 MS.gene028285:CDS
TGTACAGCTTGCATTTACTC+TGG 0.493940 4.2:+17232767 MS.gene028285:CDS
TGAATAACTGCAGGGATGCT+GGG 0.494966 4.2:+17234441 MS.gene028285:CDS
ATATATGTAAACAGGAGAAA+AGG 0.499936 4.2:-17232218 None:intergenic
AAGAGAGATACCTTGTAAAG+AGG 0.504738 4.2:+17234066 MS.gene028285:CDS
TAGGTCCAATCCTCTTTACA+AGG 0.508685 4.2:-17234076 None:intergenic
GTAATCTTCAAAGTTAATCA+AGG 0.509932 4.2:+17233747 MS.gene028285:CDS
CACTTGCTTATCATTGATTG+TGG 0.513008 4.2:+17233704 MS.gene028285:CDS
ATGGCACAGACAAAGTTAGT+TGG 0.513478 4.2:+17232104 MS.gene028285:CDS
GGTTGGAGGAACGTGAATCA+TGG 0.513701 4.2:+17231651 MS.gene028285:CDS
ACAGAAGCTTGACCAGCCTA+TGG 0.515105 4.2:+17229829 MS.gene028285:CDS
CTTTGGTTTCTCCTAATAGG+AGG 0.516527 4.2:+17232148 MS.gene028285:CDS
AAAGATGAAGAGGAAGTACT+TGG 0.516753 4.2:+17230280 MS.gene028285:CDS
CAAGCTTAACAAACAGTGAA+AGG 0.516927 4.2:-17234190 None:intergenic
CAGCCTATGGAGGAAGAGGC+AGG 0.517760 4.2:+17229842 MS.gene028285:CDS
ACAGTGATATTCACATTTGG+CGG 0.519018 4.2:-17234365 None:intergenic
ATATGTTGTTAGTTCTTCGT+CGG 0.519422 4.2:-17231579 None:intergenic
ACACGAACAAGTCCTAAACT+TGG 0.520151 4.2:-17233900 None:intergenic
CACAGTTGTGATGGCAAGGA+GGG 0.523327 4.2:+17234484 MS.gene028285:CDS
GTCGTTCTACCTTCCATGAA+AGG 0.523441 4.2:+17231603 MS.gene028285:CDS
TTTAGAAGAGGTGGAAAACA+AGG 0.524364 4.2:+17232247 MS.gene028285:CDS
ACCTGCATGGTAATCGGAGA+CGG 0.529408 4.2:+17231707 MS.gene028285:CDS
AAACAAGGATGGACTTCCCT+TGG 0.530115 4.2:+17232262 MS.gene028285:CDS
CAGTTTATATGGAGGACAGC+AGG 0.530247 4.2:+17234250 MS.gene028285:CDS
GTATGCAGCTTGTCCAGAAT+AGG 0.531509 4.2:-17232814 None:intergenic
ATGTTGCAGTTATTGTCGCC+TGG 0.531764 4.2:-17233317 None:intergenic
CGGCAATGCAAAGAATCATA+AGG 0.533751 4.2:-17233449 None:intergenic
GCATATGTACCTGATATAGC+CGG 0.535287 4.2:-17231740 None:intergenic
CTGAGACCGGAAAATGAGAT+AGG 0.535427 4.2:-17232743 None:intergenic
GCTGTTGCAACAACAAATAC+CGG 0.537816 4.2:-17233276 None:intergenic
CAAAGTTAATCAAGGTGGAT+GGG 0.539107 4.2:+17233755 MS.gene028285:CDS
TGTTAAGCTTGAATCTATGA+TGG 0.539727 4.2:+17234202 MS.gene028285:CDS
ATTAAGCAAGCCCTTGCTCA+TGG 0.540837 4.2:+17233348 MS.gene028285:CDS
AGCAAGGACAAGAATAAGAA+TGG 0.541082 4.2:-17231681 None:intergenic
TGTCCTTGCTGGCACCTGCA+TGG 0.541400 4.2:+17231694 MS.gene028285:CDS
CATATGTACCTGATATAGCC+GGG 0.543217 4.2:-17231739 None:intergenic
GGTGCGATGCTGATTGGGAA+TGG 0.543362 4.2:-17231558 None:intergenic
TATACATCAAAGAAGTTCGC+TGG 0.544206 4.2:+17233396 MS.gene028285:CDS
AACATCTGTAAGTATGGAAG+CGG 0.546719 4.2:+17232184 MS.gene028285:CDS
GCAAGCTGTACAGCTGAGAC+CGG 0.546898 4.2:-17232756 None:intergenic
CAAGGATGGACTTCCCTTGG+TGG 0.548086 4.2:+17232265 MS.gene028285:CDS
TATATACAACTTTAACTCTA+GGG 0.551474 4.2:-17233377 None:intergenic
CATGAGAGTCTCTTAAATGT+TGG 0.554708 4.2:+17234599 MS.gene028285:CDS
TTTCTGCATTGTTGATTCTG+CGG 0.554902 4.2:+17230170 MS.gene028285:CDS
GAAAACAACAACAGAATGGA+TGG 0.557910 4.2:-17234003 None:intergenic
AGGTCCTGCGGTCAAGTAAG+TGG 0.564330 4.2:+17234389 MS.gene028285:CDS
AGGAAGAGGCAGGAAGACTC+AGG 0.565443 4.2:+17229852 MS.gene028285:CDS
TTCTACAATATATTTCCGAA+CGG 0.568283 4.2:+17230253 MS.gene028285:CDS
TAGGGAAACAACCATGAGCA+AGG 0.568381 4.2:-17233359 None:intergenic
CCTTCCTGTTTACACCGTCC+CGG 0.569084 4.2:+17234040 MS.gene028285:CDS
TTGGCCACTTACTTGACCGC+AGG 0.570429 4.2:-17234393 None:intergenic
GCTGAAAATGGCTTCAAGAG+TGG 0.573798 4.2:+17229760 None:intergenic
CAAGTAAGTGGCCAAACCGA+GGG 0.574154 4.2:+17234401 MS.gene028285:CDS
ATACGAAAACAACAACAGAA+TGG 0.574312 4.2:-17234007 None:intergenic
TATATTGTAGAAAACATACA+AGG 0.574457 4.2:-17230242 None:intergenic
AATCAGCCCCATATGAGTAA+TGG 0.574491 4.2:+17231898 MS.gene028285:CDS
CAACAGAATGGATGGCTGGT+AGG 0.574816 4.2:-17233995 None:intergenic
AGCAAATGACCTTTCATGGA+AGG 0.576121 4.2:-17231612 None:intergenic
ACAACAACAGAATGGATGGC+TGG 0.578367 4.2:-17233999 None:intergenic
GAATAGGCTAAAAGAAGGCA+AGG 0.578682 4.2:-17232798 None:intergenic
TAACTGCAGGGATGCTGGGG+TGG 0.578720 4.2:+17234445 MS.gene028285:CDS
TGCAGAAAGAATATACTGGC+CGG 0.579503 4.2:+17233257 MS.gene028285:intron
CGGAGACGGGATTCTTACCC+CGG 0.579878 4.2:+17231721 MS.gene028285:CDS
AAGAGTGGACACTGATGAAG+AGG 0.581426 4.2:+17229775 MS.gene028285:CDS
GTATCTCTCTTCTTCCGGGA+CGG 0.583221 4.2:-17234054 None:intergenic
GTCCAGAATAGGCTAAAAGA+AGG 0.583432 4.2:-17232803 None:intergenic
GTCTACACAGAACTTGCAAG+TGG 0.583444 4.2:+17233939 MS.gene028285:CDS
AGAATGGATGGCTGGTAGGT+TGG 0.583797 4.2:-17233991 None:intergenic
CCTGCATGGTAATCGGAGAC+GGG 0.583917 4.2:+17231708 MS.gene028285:CDS
ATTAGGAAACACAGTTGTGA+TGG 0.587624 4.2:+17234475 MS.gene028285:CDS
GAATAACTGCAGGGATGCTG+GGG 0.589642 4.2:+17234442 MS.gene028285:CDS
GAAACACAGTTGTGATGGCA+AGG 0.591010 4.2:+17234480 MS.gene028285:CDS
GAAGAGGTGGAAAACAAGGA+TGG 0.591042 4.2:+17232251 MS.gene028285:CDS
GTGATATTCACATTTGGCGG+CGG 0.592182 4.2:-17234362 None:intergenic
GAACGGTGTGAAAGATGAAG+AGG 0.595547 4.2:+17230270 MS.gene028285:CDS
ATATAGTCCAGATATCAATT+GGG 0.598472 4.2:+17233425 MS.gene028285:CDS
TGATAACAAAGGTAGTATGT+GGG 0.599126 4.2:+17229799 MS.gene028285:CDS
TCAAGTAAGTGGCCAAACCG+AGG 0.600769 4.2:+17234400 MS.gene028285:CDS
AATCAATGATAAGCAAGTGA+AGG 0.602832 4.2:-17233700 None:intergenic
TTACCACATCTTTCGATGTG+TGG 0.605821 4.2:+17234103 MS.gene028285:CDS
GGTATTTGTTGTTGCAACAG+CGG 0.608649 4.2:+17233278 MS.gene028285:CDS
GACCGGAAAATGAGATAGGT+CGG 0.608967 4.2:-17232739 None:intergenic
CACGAACAAGTCCTAAACTT+GGG 0.614583 4.2:-17233899 None:intergenic
ATAGTAAAGTCTCGATGGCA+TGG 0.620677 4.2:+17233862 MS.gene028285:CDS
AATATCACTGTTAGGTCCTG+CGG 0.624494 4.2:+17234377 MS.gene028285:CDS
AAGCACGACTTCTTCGAATG+TGG 0.624780 4.2:+17234295 MS.gene028285:CDS
ATTTCTTAGGAAAATATGCA+GGG 0.625694 4.2:+17234550 MS.gene028285:CDS
AACACTCCGGCAATTACAAG+AGG 0.633389 4.2:-17233780 None:intergenic
ATCTTCAAAGTTAATCAAGG+TGG 0.637689 4.2:+17233750 MS.gene028285:CDS
AATGCATAGTAAAGTCTCGA+TGG 0.638063 4.2:+17233857 MS.gene028285:CDS
AAGCTTGAATCTATGATGGA+AGG 0.641141 4.2:+17234206 MS.gene028285:CDS
AGGGAAACAACCATGAGCAA+GGG 0.643819 4.2:-17233358 None:intergenic
GAAGCTTGACCAGCCTATGG+AGG 0.647530 4.2:+17229832 MS.gene028285:CDS
ACATCTTTCGATGTGTGGCA+CGG 0.647935 4.2:+17234108 MS.gene028285:CDS
AACATACCATTACTCATATG+GGG 0.653081 4.2:-17231904 None:intergenic
TGTGGAGTTAACAATTAACT+CGG 0.654521 4.2:+17234313 MS.gene028285:CDS
GATGAATACAGTTTATATGG+AGG 0.656772 4.2:+17234242 MS.gene028285:CDS
CCGGGACGGTGTAAACAGGA+AGG 0.657637 4.2:-17234040 None:intergenic
GATGAATTTATTAGGGACGG+AGG 0.657712 4.2:+17232707 MS.gene028285:intron
TTACCATGCAGGTGCCAGCA+AGG 0.657855 4.2:-17231697 None:intergenic
GATGAAGAGGGTGATAACAA+AGG 0.665526 4.2:+17229788 MS.gene028285:CDS
TTATATGGAGGACAGCAGGA+TGG 0.666470 4.2:+17234254 MS.gene028285:CDS
ACACAGTTGTGATGGCAAGG+AGG 0.669872 4.2:+17234483 MS.gene028285:CDS
AGAGCAAATGACAATGGACA+AGG 0.674340 4.2:+17230370 MS.gene028285:CDS
GTGTTAAGAGCAAATGACAA+TGG 0.677304 4.2:+17230364 MS.gene028285:CDS
TTCGTTAACAGGTACTGCAG+TGG 0.679357 4.2:+17233596 MS.gene028285:intron
GTGCCACACATCGAAAGATG+TGG 0.686236 4.2:-17234106 None:intergenic
GTGATGAAATGAGAAAAGAT+CGG 0.689117 4.2:-17233969 None:intergenic
AAGTAAGTGGCCAAACCGAG+GGG 0.689786 4.2:+17234402 MS.gene028285:CDS
TACTGAGCATGATACCACCA+AGG 0.690342 4.2:-17232279 None:intergenic
ACTGAGCATGATACCACCAA+GGG 0.691706 4.2:-17232278 None:intergenic
CTCCTATTAGGAGAAACCAA+AGG 0.694794 4.2:-17232147 None:intergenic
AGAGTGGACACTGATGAAGA+GGG 0.700617 4.2:+17229776 MS.gene028285:CDS
CTATTAGGAGAAACCAAAGG+AGG 0.702161 4.2:-17232144 None:intergenic
ATGAAATGAGAAAAGATCGG+TGG 0.702922 4.2:-17233966 None:intergenic
AGTAAGTGGCCAAACCGAGG+GGG 0.709182 4.2:+17234403 MS.gene028285:CDS
ATATTGTAGAAAACATACAA+GGG 0.712231 4.2:-17230241 None:intergenic
ATATGTACCTGATATAGCCG+GGG 0.713157 4.2:-17231738 None:intergenic
ATATTTGAGAAGAGGCACCA+AGG 0.717350 4.2:-17230332 None:intergenic
ACATTTAAGAGACTCTCATG+AGG 0.718347 4.2:-17234596 None:intergenic
GATGGCGTGTTGAATAACAA+CGG 0.731429 4.2:+17234272 MS.gene028285:CDS
AGGCAAGTACAAGAATCCAG+TGG 0.751362 4.2:-17233680 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGGAGATAAAAAAAAAAAAA+AGG - chr4.2:17232345-17232364 None:intergenic 15.0%
!! ATATCATGATTAAAATCATA+AGG - chr4.2:17233647-17233666 None:intergenic 15.0%
!! ATTATATATATGCATTTCTT+AGG + chr4.2:17234537-17234556 MS.gene028285:CDS 15.0%
!! GATAAAAAAAAAAAAAAGGA+AGG - chr4.2:17232341-17232360 None:intergenic 15.0%
!! TTCAAAAAAATTAAAAGAGT+AGG - chr4.2:17231044-17231063 None:intergenic 15.0%
!!! CTTTTTTCTTTTTACTTTTT+TGG + chr4.2:17231234-17231253 MS.gene028285:intron 15.0%
!!! TATGATTTTAATCATGATAT+TGG + chr4.2:17233647-17233666 MS.gene028285:CDS 15.0%
!!! TTTCTCTTATATTTTTCTAA+TGG + chr4.2:17233198-17233217 MS.gene028285:intron 15.0%
!! AAAATCATAATCACAAACAT+TGG - chr4.2:17230020-17230039 None:intergenic 20.0%
!! AAATACTTAAAATATCCCTA+AGG - chr4.2:17231143-17231162 None:intergenic 20.0%
!! AAATAGTGATATATGTAAAC+AGG - chr4.2:17232229-17232248 None:intergenic 20.0%
!! AATTGAGAGAAAATATTCAT+CGG - chr4.2:17233549-17233568 None:intergenic 20.0%
!! ATAAAAACATATTTGAGAAG+AGG - chr4.2:17230343-17230362 None:intergenic 20.0%
!! ATATTGTAGAAAACATACAA+GGG - chr4.2:17230244-17230263 None:intergenic 20.0%
!! ATATTTAACATCTGTAAGTA+TGG + chr4.2:17232178-17232197 MS.gene028285:CDS 20.0%
!! TACAATGTATTTAAGTACTA+CGG - chr4.2:17232466-17232485 None:intergenic 20.0%
!! TATATACAACTTTAACTCTA+GGG - chr4.2:17233380-17233399 None:intergenic 20.0%
!! TATATTGTAGAAAACATACA+AGG - chr4.2:17230245-17230264 None:intergenic 20.0%
!! TCATTACAAATTGAAACAAA+AGG - chr4.2:17230491-17230510 None:intergenic 20.0%
!!! AACTTTTGGATGAATTTATT+AGG + chr4.2:17232699-17232718 MS.gene028285:intron 20.0%
!!! ACAGTATTTTTAAACTCTAT+GGG - chr4.2:17233119-17233138 None:intergenic 20.0%
!!! ACTTTTGGATGAATTTATTA+GGG + chr4.2:17232700-17232719 MS.gene028285:intron 20.0%
!!! ATATATCACTATTTTAGAAG+AGG + chr4.2:17232235-17232254 MS.gene028285:CDS 20.0%
!!! ATTTTAATTACAGTTATGGA+AGG - chr4.2:17231393-17231412 None:intergenic 20.0%
!!! GAGTATTTTAATTACAGTTA+TGG - chr4.2:17231397-17231416 None:intergenic 20.0%
!!! GTTAATATTTGCATCTTTTA+TGG + chr4.2:17230538-17230557 MS.gene028285:intron 20.0%
!!! GTTTTTAACGAATTTAAGTT+GGG + chr4.2:17231990-17232009 MS.gene028285:intron 20.0%
!!! TACAGTATTTTTAAACTCTA+TGG - chr4.2:17233120-17233139 None:intergenic 20.0%
!!! TATTGATAACAATGAAACTA+CGG - chr4.2:17231362-17231381 None:intergenic 20.0%
!!! TCAATTGTTTTCTAAACTTT+TGG + chr4.2:17230395-17230414 MS.gene028285:intron 20.0%
!!! TGTTTTTAACGAATTTAAGT+TGG + chr4.2:17231989-17232008 MS.gene028285:intron 20.0%
!!! TTTTGTACTTTAACAACTTT+TGG + chr4.2:17232685-17232704 MS.gene028285:intron 20.0%
!!! TTTTTATCATTATGTTTGTC+TGG + chr4.2:17233802-17233821 MS.gene028285:CDS 20.0%
! AAAAAAGAAATTGCCTCTAA+AGG - chr4.2:17231221-17231240 None:intergenic 25.0%
! AAAGATATGAAAAACACAAG+CGG - chr4.2:17232587-17232606 None:intergenic 25.0%
! AACACTAATTACATTAAGGA+AGG - chr4.2:17232365-17232384 None:intergenic 25.0%
! AATGAGTCAAGTTATTCATA+AGG - chr4.2:17232839-17232858 None:intergenic 25.0%
! ATAAAACTACATGGAAGATA+TGG - chr4.2:17231855-17231874 None:intergenic 25.0%
! ATATAGTCCAGATATCAATT+GGG + chr4.2:17233425-17233444 MS.gene028285:CDS 25.0%
! ATATATGTAAACAGGAGAAA+AGG - chr4.2:17232221-17232240 None:intergenic 25.0%
! ATTTCTTAGGAAAATATGCA+GGG + chr4.2:17234550-17234569 MS.gene028285:CDS 25.0%
! CAATTGTTAGAACAATAACT+CGG - chr4.2:17232621-17232640 None:intergenic 25.0%
! CATAATGATAAAAAACACTC+CGG - chr4.2:17233796-17233815 None:intergenic 25.0%
! CCAAAAAGAAAATCAATATG+AGG - chr4.2:17229942-17229961 None:intergenic 25.0%
! GAAAAAAGGATGGTTATATT+AGG + chr4.2:17230730-17230749 MS.gene028285:intron 25.0%
! GAACTAAAAAATTGTATTGG+AGG + chr4.2:17230898-17230917 MS.gene028285:intron 25.0%
! GCCAGATACAAATTTAAAAA+GGG + chr4.2:17230569-17230588 MS.gene028285:intron 25.0%
! GTATATACAACTTTAACTCT+AGG - chr4.2:17233381-17233400 None:intergenic 25.0%
! TAAAAAATTGTATTGGAGGA+GGG + chr4.2:17230902-17230921 MS.gene028285:intron 25.0%
! TAAGAATCTCTTCAAATAGA+TGG - chr4.2:17231831-17231850 None:intergenic 25.0%
! TATAACCCTATATTAGAACA+GGG - chr4.2:17231166-17231185 None:intergenic 25.0%
! TATATAGTCCAGATATCAAT+TGG + chr4.2:17233424-17233443 MS.gene028285:CDS 25.0%
! TATATTGAAATCTTCATGTC+TGG + chr4.2:17232909-17232928 MS.gene028285:intron 25.0%
! TATTTCCCTGTTCTAATATA+GGG + chr4.2:17231158-17231177 MS.gene028285:intron 25.0%
! TCAGATGAATACAGTTTATA+TGG + chr4.2:17234239-17234258 MS.gene028285:CDS 25.0%
! TCCTTAATGTAATTAGTGTT+GGG + chr4.2:17232365-17232384 MS.gene028285:intron 25.0%
! TGAATTTACAATTCGTTAAC+AGG + chr4.2:17233585-17233604 MS.gene028285:intron 25.0%
! TGATATACTACTATAGTCTA+TGG + chr4.2:17229896-17229915 MS.gene028285:intron 25.0%
! TGCCAGATACAAATTTAAAA+AGG + chr4.2:17230568-17230587 MS.gene028285:intron 25.0%
! TTATAACCCTATATTAGAAC+AGG - chr4.2:17231167-17231186 None:intergenic 25.0%
! TTCCTTAATGTAATTAGTGT+TGG + chr4.2:17232364-17232383 MS.gene028285:intron 25.0%
! TTCTACAATATATTTCCGAA+CGG + chr4.2:17230253-17230272 MS.gene028285:CDS 25.0%
! TTGAAAAGCTTCTTTATCTT+TGG + chr4.2:17232018-17232037 MS.gene028285:intron 25.0%
!! ATTGCTGTTGTAATATTAGT+TGG + chr4.2:17232061-17232080 MS.gene028285:CDS 25.0%
!! TCCCTTTTTAAATTTGTATC+TGG - chr4.2:17230573-17230592 None:intergenic 25.0%
!! TGAATTTTTGAATAACTGCA+GGG + chr4.2:17234433-17234452 MS.gene028285:CDS 25.0%
!! TTGAATTTTTGAATAACTGC+AGG + chr4.2:17234432-17234451 MS.gene028285:CDS 25.0%
!! TTTTAATCATGATATTGGTG+TGG + chr4.2:17233652-17233671 MS.gene028285:CDS 25.0%
!!! CCTCATATTGATTTTCTTTT+TGG + chr4.2:17229939-17229958 MS.gene028285:intron 25.0%
!!! TAGTTTTATTATGCCTTTAG+AGG + chr4.2:17231205-17231224 MS.gene028285:intron 25.0%
!!! TATCTTCCATGTAGTTTTAT+CGG + chr4.2:17231855-17231874 MS.gene028285:intron 25.0%
!!! TTTCTTTTTGGTAGACAAAA+TGG + chr4.2:17229951-17229970 MS.gene028285:intron 25.0%
AAAAACTAAAAGATGGTTGG+AGG + chr4.2:17231637-17231656 MS.gene028285:CDS 30.0%
AAATGCTTCAGAAAAAAGGA+TGG + chr4.2:17230720-17230739 MS.gene028285:intron 30.0%
AACATACCATTACTCATATG+GGG - chr4.2:17231907-17231926 None:intergenic 30.0%
AATACTAAACCCTTCTCATT+TGG + chr4.2:17230873-17230892 MS.gene028285:intron 30.0%
AATCAATGATAAGCAAGTGA+AGG - chr4.2:17233703-17233722 None:intergenic 30.0%
ACAAATTGAAACAAAAGGAG+TGG - chr4.2:17230486-17230505 None:intergenic 30.0%
ACATCAGAATAGAAAACTGA+GGG + chr4.2:17233161-17233180 MS.gene028285:intron 30.0%
ACTACACTAAATATACACTG+TGG - chr4.2:17230520-17230539 None:intergenic 30.0%
ATACGAAAACAACAACAGAA+TGG - chr4.2:17234010-17234029 None:intergenic 30.0%
ATACTAAACCCTTCTCATTT+GGG + chr4.2:17230874-17230893 MS.gene028285:intron 30.0%
ATATACCAATACCTCCTATT+AGG - chr4.2:17232162-17232181 None:intergenic 30.0%
ATATGTAAGCTCTTGGAATT+TGG + chr4.2:17230105-17230124 MS.gene028285:intron 30.0%
ATTATGTTTGTCTGGCATTA+CGG + chr4.2:17233810-17233829 MS.gene028285:CDS 30.0%
CAAATGTGAATATCACTGTT+AGG + chr4.2:17234369-17234388 MS.gene028285:CDS 30.0%
CATTATCAGTTACATAGTCA+TGG - chr4.2:17231285-17231304 None:intergenic 30.0%
CATTTCTTAGGAAAATATGC+AGG + chr4.2:17234549-17234568 MS.gene028285:CDS 30.0%
CGAGTTATTGTTCTAACAAT+TGG + chr4.2:17232619-17232638 MS.gene028285:intron 30.0%
CTAAAAAATTGTATTGGAGG+AGG + chr4.2:17230901-17230920 MS.gene028285:intron 30.0%
CTAACAGTGATATTCACATT+TGG - chr4.2:17234371-17234390 None:intergenic 30.0%
CTACACTAAATATACACTGT+GGG - chr4.2:17230519-17230538 None:intergenic 30.0%
GAACATACCATTACTCATAT+GGG - chr4.2:17231908-17231927 None:intergenic 30.0%
GATAATCAACATCTGTCTAA+TGG - chr4.2:17233229-17233248 None:intergenic 30.0%
GATGAATACAGTTTATATGG+AGG + chr4.2:17234242-17234261 MS.gene028285:CDS 30.0%
GGATGAAATAGAGGAAAAAT+GGG + chr4.2:17230815-17230834 MS.gene028285:intron 30.0%
GGGGAACTAAAAAATTGTAT+TGG + chr4.2:17230895-17230914 MS.gene028285:intron 30.0%
GTATTTCCCTGTTCTAATAT+AGG + chr4.2:17231157-17231176 MS.gene028285:intron 30.0%
GTCAGATATTCTATGTATAG+AGG + chr4.2:17234621-17234640 MS.gene028285:CDS 30.0%
GTGATGAAATGAGAAAAGAT+CGG - chr4.2:17233972-17233991 None:intergenic 30.0%
GTGGAAAATATGACGAAAAA+TGG - chr4.2:17231075-17231094 None:intergenic 30.0%
TAAGCTAATATGTAAGCTCT+TGG + chr4.2:17230098-17230117 MS.gene028285:intron 30.0%
TAATCAATAGCATGCTATAG+CGG + chr4.2:17230613-17230632 MS.gene028285:intron 30.0%
TGATAACAAAGGTAGTATGT+GGG + chr4.2:17229799-17229818 MS.gene028285:CDS 30.0%
TGATATCTGGACTATATATC+TGG - chr4.2:17233422-17233441 None:intergenic 30.0%
TGCAAAAACTAAAAGATGGT+TGG + chr4.2:17231634-17231653 MS.gene028285:CDS 30.0%
TGCTAAATGCTTCAGAAAAA+AGG + chr4.2:17230716-17230735 MS.gene028285:intron 30.0%
TGGATGAAATAGAGGAAAAA+TGG + chr4.2:17230814-17230833 MS.gene028285:intron 30.0%
TGTGGAGTTAACAATTAACT+CGG + chr4.2:17234313-17234332 MS.gene028285:CDS 30.0%
TGTTAAGCTTGAATCTATGA+TGG + chr4.2:17234202-17234221 MS.gene028285:CDS 30.0%
TTCGAAAATCAAAACCAGAT+TGG + chr4.2:17233483-17233502 MS.gene028285:CDS 30.0%
TTGCTGCAAAAACTAAAAGA+TGG + chr4.2:17231630-17231649 MS.gene028285:CDS 30.0%
TTGGATGAATTTATTAGGGA+CGG + chr4.2:17232704-17232723 MS.gene028285:intron 30.0%
! ATATGTTGTTAGTTCTTCGT+CGG - chr4.2:17231582-17231601 None:intergenic 30.0%
! GCTTTTTATCTTTCTATTCC+AGG + chr4.2:17232867-17232886 MS.gene028285:CDS 30.0%
! GTTTTGCAGAAAGAATATAC+TGG + chr4.2:17233253-17233272 MS.gene028285:intron 30.0%
!! TATCACTATTTTAGAAGAGG+TGG + chr4.2:17232238-17232257 MS.gene028285:CDS 30.0%
!! TATTTTTGTACCACTATGCA+TGG + chr4.2:17231956-17231975 MS.gene028285:intron 30.0%
AAAACTGACATTTGTAGAGC+AGG + chr4.2:17231485-17231504 MS.gene028285:intron 35.0%
AAATAGAGGAAAAATGGGAG+GGG + chr4.2:17230820-17230839 MS.gene028285:intron 35.0%
AACATCTGTAAGTATGGAAG+CGG + chr4.2:17232184-17232203 MS.gene028285:CDS 35.0%
AACCAGATTGGAAATGCTTA+TGG + chr4.2:17233495-17233514 MS.gene028285:CDS 35.0%
AAGAGAGATACCTTGTAAAG+AGG + chr4.2:17234066-17234085 MS.gene028285:CDS 35.0%
AATGCATAGTAAAGTCTCGA+TGG + chr4.2:17233857-17233876 MS.gene028285:CDS 35.0%
ACAGTGATATTCACATTTGG+CGG - chr4.2:17234368-17234387 None:intergenic 35.0%
ACATTTAAGAGACTCTCATG+AGG - chr4.2:17234599-17234618 None:intergenic 35.0%
AGATACCTTGTAAAGAGGAT+TGG + chr4.2:17234071-17234090 MS.gene028285:CDS 35.0%
AGCAAGGACAAGAATAAGAA+TGG - chr4.2:17231684-17231703 None:intergenic 35.0%
AGTAAAAAGTTCAGCTAACC+TGG - chr4.2:17232888-17232907 None:intergenic 35.0%
ATAAGGACCCAATTGATATC+TGG - chr4.2:17233435-17233454 None:intergenic 35.0%
ATCAGTGCATCAGTAAAACA+CGG - chr4.2:17230079-17230098 None:intergenic 35.0%
ATGAAATGAGAAAAGATCGG+TGG - chr4.2:17233969-17233988 None:intergenic 35.0%
ATTAGGAAACACAGTTGTGA+TGG + chr4.2:17234475-17234494 MS.gene028285:CDS 35.0%
ATTCCCTTTGTACAATCTCA+AGG - chr4.2:17230422-17230441 None:intergenic 35.0%
ATTCTTATTCTTGTCCTTGC+TGG + chr4.2:17231683-17231702 MS.gene028285:CDS 35.0%
CAAGCTTAACAAACAGTGAA+AGG - chr4.2:17234193-17234212 None:intergenic 35.0%
CAATATTTAACCACGGAGTT+CGG - chr4.2:17232556-17232575 None:intergenic 35.0%
CACATCAGAATAGAAAACTG+AGG + chr4.2:17233160-17233179 MS.gene028285:intron 35.0%
CAGGTAAGAATCTGAGAAAA+AGG - chr4.2:17233027-17233046 None:intergenic 35.0%
CATGAGAGTCTCTTAAATGT+TGG + chr4.2:17234599-17234618 MS.gene028285:CDS 35.0%
CGAAAGATGTGGTAATTCTT+AGG - chr4.2:17234098-17234117 None:intergenic 35.0%
GAAAACAACAACAGAATGGA+TGG - chr4.2:17234006-17234025 None:intergenic 35.0%
GAAATAGAGGAAAAATGGGA+GGG + chr4.2:17230819-17230838 MS.gene028285:intron 35.0%
GAGCACACAATATTTAACCA+CGG - chr4.2:17232563-17232582 None:intergenic 35.0%
GATTATCTACTCTCTTACCT+TGG + chr4.2:17230315-17230334 MS.gene028285:CDS 35.0%
GCCCAACACTAATTACATTA+AGG - chr4.2:17232369-17232388 None:intergenic 35.0%
GCTTCTTTATCTTTGGATAC+AGG + chr4.2:17232025-17232044 MS.gene028285:intron 35.0%
GGAACATACCATTACTCATA+TGG - chr4.2:17231909-17231928 None:intergenic 35.0%
GTGATAACAAAGGTAGTATG+TGG + chr4.2:17229798-17229817 MS.gene028285:CDS 35.0%
GTGTTAAGAGCAAATGACAA+TGG + chr4.2:17230364-17230383 MS.gene028285:CDS 35.0%
TACCATAAGCATTTCCAATC+TGG - chr4.2:17233500-17233519 None:intergenic 35.0%
TACTAAACCCTTCTCATTTG+GGG + chr4.2:17230875-17230894 MS.gene028285:intron 35.0%
TATACATCAAAGAAGTTCGC+TGG + chr4.2:17233396-17233415 MS.gene028285:CDS 35.0%
TGAAATAGAGGAAAAATGGG+AGG + chr4.2:17230818-17230837 MS.gene028285:intron 35.0%
TGTATTTAAGTACTACGGTC+TGG - chr4.2:17232461-17232480 None:intergenic 35.0%
TTTAGAAGAGGTGGAAAACA+AGG + chr4.2:17232247-17232266 MS.gene028285:CDS 35.0%
TTTATCTTTGGATACAGGTG+TGG + chr4.2:17232030-17232049 MS.gene028285:intron 35.0%
! AAGCTTGAATCTATGATGGA+AGG + chr4.2:17234206-17234225 MS.gene028285:CDS 35.0%
! ACTAATTAGCTTCAGAGAGA+AGG - chr4.2:17231765-17231784 None:intergenic 35.0%
! CACTTGCTTATCATTGATTG+TGG + chr4.2:17233704-17233723 MS.gene028285:CDS 35.0%
! GCATTTAGCAGTTGCAATTT+TGG - chr4.2:17230706-17230725 None:intergenic 35.0%
! TGGTTTTTATCTTTGCGTGT+CGG - chr4.2:17231541-17231560 None:intergenic 35.0%
! TTCTGATGTGTTGATATGCT+TGG - chr4.2:17233150-17233169 None:intergenic 35.0%
! TTTCTCCTAATAGGAGGTAT+TGG + chr4.2:17232154-17232173 MS.gene028285:CDS 35.0%
! TTTTCTCAGATTCTTACCTG+CGG + chr4.2:17233027-17233046 MS.gene028285:intron 35.0%
!! AAAGATGAAGAGGAAGTACT+TGG + chr4.2:17230280-17230299 MS.gene028285:CDS 35.0%
!! TTTCTGCATTGTTGATTCTG+CGG + chr4.2:17230170-17230189 MS.gene028285:CDS 35.0%
!! TTTTTCAGCCTGCAACATTA+TGG + chr4.2:17232085-17232104 MS.gene028285:CDS 35.0%
!!! GTGCATAGTTTTGTATAGAG+TGG + chr4.2:17231318-17231337 MS.gene028285:intron 35.0%
AACTCGCAAACAAAGCCTTA+GGG + chr4.2:17231125-17231144 MS.gene028285:intron 40.0%
AACTGTCTTGCTACAGAAGT+AGG - chr4.2:17231930-17231949 None:intergenic 40.0%
AATAGAGGAAAAATGGGAGG+GGG + chr4.2:17230821-17230840 MS.gene028285:intron 40.0%
AATATCACTGTTAGGTCCTG+CGG + chr4.2:17234377-17234396 MS.gene028285:CDS 40.0%
AATCAGCCCCATATGAGTAA+TGG + chr4.2:17231898-17231917 MS.gene028285:CDS 40.0%
ACACGAACAAGTCCTAAACT+TGG - chr4.2:17233903-17233922 None:intergenic 40.0%
ACTAAACCCTTCTCATTTGG+GGG + chr4.2:17230876-17230895 MS.gene028285:intron 40.0%
AGAAACCAAAGGAGGACAAT+TGG - chr4.2:17232139-17232158 None:intergenic 40.0%
AGAGCAAATGACAATGGACA+AGG + chr4.2:17230370-17230389 MS.gene028285:CDS 40.0%
AGCAAATGACCTTTCATGGA+AGG - chr4.2:17231615-17231634 None:intergenic 40.0%
ATAGCTCACAGTTTACGGAT+AGG + chr4.2:17232389-17232408 MS.gene028285:intron 40.0%
ATAGTAAAGTCTCGATGGCA+TGG + chr4.2:17233862-17233881 MS.gene028285:CDS 40.0%
ATATGTACCTGATATAGCCG+GGG - chr4.2:17231741-17231760 None:intergenic 40.0%
ATGGCACAGACAAAGTTAGT+TGG + chr4.2:17232104-17232123 MS.gene028285:CDS 40.0%
ATTGGAAATCTGTAGCAGAG+TGG + chr4.2:17230647-17230666 MS.gene028285:intron 40.0%
CAAAGGTAGTATGTGGGATT+TGG + chr4.2:17229805-17229824 MS.gene028285:CDS 40.0%
CAACAGCCGATAAAACTACA+TGG - chr4.2:17231864-17231883 None:intergenic 40.0%
CACGAACAAGTCCTAAACTT+GGG - chr4.2:17233902-17233921 None:intergenic 40.0%
CATATGTACCTGATATAGCC+GGG - chr4.2:17231742-17231761 None:intergenic 40.0%
CCATTATCGCTGAAAGCTTA+GGG - chr4.2:17232498-17232517 None:intergenic 40.0%
CGGCAATGCAAAGAATCATA+AGG - chr4.2:17233452-17233471 None:intergenic 40.0%
CTAAATGCTTCCATGCATAG+TGG - chr4.2:17231969-17231988 None:intergenic 40.0%
CTATTAGGAGAAACCAAAGG+AGG - chr4.2:17232147-17232166 None:intergenic 40.0%
CTCCTATTAGGAGAAACCAA+AGG - chr4.2:17232150-17232169 None:intergenic 40.0%
GAAACTATGACGCACTAACA+CGG - chr4.2:17233089-17233108 None:intergenic 40.0%
GAATAGGCTAAAAGAAGGCA+AGG - chr4.2:17232801-17232820 None:intergenic 40.0%
GATGAAGAGGGTGATAACAA+AGG + chr4.2:17229788-17229807 MS.gene028285:CDS 40.0%
GATGAATTTATTAGGGACGG+AGG + chr4.2:17232707-17232726 MS.gene028285:intron 40.0%
GATGGCGTGTTGAATAACAA+CGG + chr4.2:17234272-17234291 MS.gene028285:CDS 40.0%
GCATATGTACCTGATATAGC+CGG - chr4.2:17231743-17231762 None:intergenic 40.0%
GCTGTTGCAACAACAAATAC+CGG - chr4.2:17233279-17233298 None:intergenic 40.0%
GGAAAAAAGGAATGAGCAAG+TGG + chr4.2:17230794-17230813 MS.gene028285:intron 40.0%
GGTATCATGCTCAGTATAAC+AGG + chr4.2:17232286-17232305 MS.gene028285:CDS 40.0%
GGTCCTTGAGATTGTACAAA+GGG + chr4.2:17230416-17230435 MS.gene028285:intron 40.0%
GTCCAGAATAGGCTAAAAGA+AGG - chr4.2:17232806-17232825 None:intergenic 40.0%
TAGCTCACAGTTTACGGATA+GGG + chr4.2:17232390-17232409 MS.gene028285:intron 40.0%
TAGGTCCAATCCTCTTTACA+AGG - chr4.2:17234079-17234098 None:intergenic 40.0%
TCCATTATCGCTGAAAGCTT+AGG - chr4.2:17232499-17232518 None:intergenic 40.0%
TCTTCATCTTTCACACCGTT+CGG - chr4.2:17230271-17230290 None:intergenic 40.0%
TGAGCAAGTGGATGAAATAG+AGG + chr4.2:17230806-17230825 MS.gene028285:intron 40.0%
TGCAGAAAGAATATACTGGC+CGG + chr4.2:17233257-17233276 MS.gene028285:intron 40.0%
TGGTCCTTGAGATTGTACAA+AGG + chr4.2:17230415-17230434 MS.gene028285:intron 40.0%
TGTACAGCTTGCATTTACTC+TGG + chr4.2:17232767-17232786 MS.gene028285:CDS 40.0%
TGTTAGTGCGTCATAGTTTC+TGG + chr4.2:17233089-17233108 MS.gene028285:intron 40.0%
TTACCACATCTTTCGATGTG+TGG + chr4.2:17234103-17234122 MS.gene028285:CDS 40.0%
TTAGTTCCCCCAAATGAGAA+GGG - chr4.2:17230885-17230904 None:intergenic 40.0%
TTGCAGCAAATGACCTTTCA+TGG - chr4.2:17231619-17231638 None:intergenic 40.0%
! AAATTCAAGTTCATCCCCCT+CGG - chr4.2:17234420-17234439 None:intergenic 40.0%
! ACAAGGTATCTCTCTTCTTC+CGG - chr4.2:17234062-17234081 None:intergenic 40.0%
! CTATGTTTTGCTCAAGACCT+AGG + chr4.2:17231259-17231278 MS.gene028285:intron 40.0%
! CTCCTTTGGTTTCTCCTAAT+AGG + chr4.2:17232145-17232164 MS.gene028285:CDS 40.0%
! CTTTGGTTTCTCCTAATAGG+AGG + chr4.2:17232148-17232167 MS.gene028285:CDS 40.0%
! CTTTGTTTGCGAGTTTGAAG+GGG + chr4.2:17230753-17230772 MS.gene028285:intron 40.0%
! TGCCTTCTTTTAGCCTATTC+TGG + chr4.2:17232801-17232820 MS.gene028285:CDS 40.0%
! TGTATTGGAGGAGGGTTTTT+GGG + chr4.2:17230910-17230929 MS.gene028285:intron 40.0%
! TTGTATTGGAGGAGGGTTTT+TGG + chr4.2:17230909-17230928 MS.gene028285:intron 40.0%
! TTTAGTTCCCCCAAATGAGA+AGG - chr4.2:17230886-17230905 None:intergenic 40.0%
!! AGCTTTCAGCGATAATGGAA+AGG + chr4.2:17232500-17232519 MS.gene028285:intron 40.0%
!! ATATTTGAGAAGAGGCACCA+AGG - chr4.2:17230335-17230354 None:intergenic 40.0%
!! GCTTTGTTTGCGAGTTTGAA+GGG + chr4.2:17230752-17230771 MS.gene028285:intron 40.0%
!! GGTATTTGTTGTTGCAACAG+CGG + chr4.2:17233278-17233297 MS.gene028285:CDS 40.0%
!! TAACATGTTAGTCTTGTGCC+TGG + chr4.2:17233053-17233072 MS.gene028285:intron 40.0%
!! TAATGGAAAGGTACTGCACT+CGG + chr4.2:17232512-17232531 MS.gene028285:intron 40.0%
!!! CATGTAGTTTTATCGGCTGT+TGG + chr4.2:17231862-17231881 MS.gene028285:intron 40.0%
!!! CTGGTTTTGATTTTCGAACC+CGG - chr4.2:17233481-17233500 None:intergenic 40.0%
!!! TAGTTTTATCGGCTGTTGGT+GGG + chr4.2:17231866-17231885 MS.gene028285:intron 40.0%
AACACTCCGGCAATTACAAG+AGG - chr4.2:17233783-17233802 None:intergenic 45.0%
AAGAGTGGACACTGATGAAG+AGG + chr4.2:17229775-17229794 MS.gene028285:CDS 45.0%
AAGCACGACTTCTTCGAATG+TGG + chr4.2:17234295-17234314 MS.gene028285:CDS 45.0%
ACAACAACAGAATGGATGGC+TGG - chr4.2:17234002-17234021 None:intergenic 45.0%
ACATCTTTCGATGTGTGGCA+CGG + chr4.2:17234108-17234127 MS.gene028285:CDS 45.0%
ACTCTTCGTCTTTCTTGTGC+AGG - chr4.2:17234148-17234167 None:intergenic 45.0%
ACTGACATTTGTAGAGCAGG+TGG + chr4.2:17231488-17231507 MS.gene028285:intron 45.0%
ACTGAGCATGATACCACCAA+GGG - chr4.2:17232281-17232300 None:intergenic 45.0%
AGAGTGGACACTGATGAAGA+GGG + chr4.2:17229776-17229795 MS.gene028285:CDS 45.0%
AGGCAAGTACAAGAATCCAG+TGG - chr4.2:17233683-17233702 None:intergenic 45.0%
AGGGAAACAACCATGAGCAA+GGG - chr4.2:17233361-17233380 None:intergenic 45.0%
ATAGAGGAAAAATGGGAGGG+GGG + chr4.2:17230822-17230841 MS.gene028285:intron 45.0%
ATAGCATGCTATAGCGGCAT+TGG + chr4.2:17230619-17230638 MS.gene028285:intron 45.0%
ATGAATCTAGTGTCCGACAC+CGG + chr4.2:17232961-17232980 MS.gene028285:intron 45.0%
ATGTTGCAGTTATTGTCGCC+TGG - chr4.2:17233320-17233339 None:intergenic 45.0%
ATTAAGCAAGCCCTTGCTCA+TGG + chr4.2:17233348-17233367 MS.gene028285:CDS 45.0%
ATTCTTACCCCGGCTATATC+AGG + chr4.2:17231731-17231750 MS.gene028285:CDS 45.0%
CAACTCGCAAACAAAGCCTT+AGG + chr4.2:17231124-17231143 MS.gene028285:intron 45.0%
CAGTTACATAGTCATGGCCT+AGG - chr4.2:17231279-17231298 None:intergenic 45.0%
CAGTTTATATGGAGGACAGC+AGG + chr4.2:17234250-17234269 MS.gene028285:CDS 45.0%
CCCTAAGCTTTCAGCGATAA+TGG + chr4.2:17232495-17232514 MS.gene028285:intron 45.0%
CTGAGACCGGAAAATGAGAT+AGG - chr4.2:17232746-17232765 None:intergenic 45.0%
CTTGTTCGTGTACCTGGAAT+CGG + chr4.2:17233912-17233931 MS.gene028285:CDS 45.0%
GAAACACAGTTGTGATGGCA+AGG + chr4.2:17234480-17234499 MS.gene028285:CDS 45.0%
GAACGGTGTGAAAGATGAAG+AGG + chr4.2:17230270-17230289 MS.gene028285:CDS 45.0%
GAAGAGGTGGAAAACAAGGA+TGG + chr4.2:17232251-17232270 MS.gene028285:CDS 45.0%
GACCGGAAAATGAGATAGGT+CGG - chr4.2:17232742-17232761 None:intergenic 45.0%
GACTAACATGTTAACACCGC+AGG - chr4.2:17233046-17233065 None:intergenic 45.0%
GATTCTTTGCATTGCCGTCA+CGG + chr4.2:17233455-17233474 MS.gene028285:CDS 45.0%
GGCGTCGTTTATGGAGATTT+GGG + chr4.2:17230211-17230230 MS.gene028285:CDS 45.0%
GTATGCAGCTTGTCCAGAAT+AGG - chr4.2:17232817-17232836 None:intergenic 45.0%
GTCGTTCTACCTTCCATGAA+AGG + chr4.2:17231603-17231622 MS.gene028285:CDS 45.0%
GTCTACACAGAACTTGCAAG+TGG + chr4.2:17233939-17233958 MS.gene028285:CDS 45.0%
GTGATATTCACATTTGGCGG+CGG - chr4.2:17234365-17234384 None:intergenic 45.0%
TACTGAGCATGATACCACCA+AGG - chr4.2:17232282-17232301 None:intergenic 45.0%
TAGGGAAACAACCATGAGCA+AGG - chr4.2:17233362-17233381 None:intergenic 45.0%
TCACAGTTTACGGATAGGGT+AGG + chr4.2:17232394-17232413 MS.gene028285:intron 45.0%
TGAATAACTGCAGGGATGCT+GGG + chr4.2:17234441-17234460 MS.gene028285:CDS 45.0%
TGGCGTCGTTTATGGAGATT+TGG + chr4.2:17230210-17230229 MS.gene028285:CDS 45.0%
TGGGCATAGCTCACAGTTTA+CGG + chr4.2:17232384-17232403 MS.gene028285:intron 45.0%
TGGGTTCCTCTTGTAATTGC+CGG + chr4.2:17233774-17233793 MS.gene028285:CDS 45.0%
TGTCTGTGCCATAATGTTGC+AGG - chr4.2:17232096-17232115 None:intergenic 45.0%
TTATATGGAGGACAGCAGGA+TGG + chr4.2:17234254-17234273 MS.gene028285:CDS 45.0%
TTGAATAACTGCAGGGATGC+TGG + chr4.2:17234440-17234459 MS.gene028285:CDS 45.0%
TTGCTCCAATTGTCCTCCTT+TGG + chr4.2:17232131-17232150 MS.gene028285:CDS 45.0%
TTTGCGAGTTTGAAGGGGAA+GGG + chr4.2:17230758-17230777 MS.gene028285:intron 45.0%
! AAACAAGGATGGACTTCCCT+TGG + chr4.2:17232262-17232281 MS.gene028285:CDS 45.0%
! CAAGGTATCTCTCTTCTTCC+GGG - chr4.2:17234061-17234080 None:intergenic 45.0%
! GTATTGGAGGAGGGTTTTTG+GGG + chr4.2:17230911-17230930 MS.gene028285:intron 45.0%
! TTAGGACTTGTTCGTGTACC+TGG + chr4.2:17233906-17233925 MS.gene028285:CDS 45.0%
! TTCGTTAACAGGTACTGCAG+TGG + chr4.2:17233596-17233615 MS.gene028285:intron 45.0%
!! CTAAGGCTTTGTTTGCGAGT+TGG - chr4.2:17231126-17231145 None:intergenic 45.0%
!! GGCTTTGTTTGCGAGTTTGA+AGG + chr4.2:17230751-17230770 MS.gene028285:intron 45.0%
!! TATTGGAGGAGGGTTTTTGG+GGG + chr4.2:17230912-17230931 MS.gene028285:intron 45.0%
!!! GTAGTTTTATCGGCTGTTGG+TGG + chr4.2:17231865-17231884 MS.gene028285:intron 45.0%
AAGTAAGTGGCCAAACCGAG+GGG + chr4.2:17234402-17234421 MS.gene028285:CDS 50.0%
ACACAGTTGTGATGGCAAGG+AGG + chr4.2:17234483-17234502 MS.gene028285:CDS 50.0%
ACAGAAGCTTGACCAGCCTA+TGG + chr4.2:17229829-17229848 MS.gene028285:CDS 50.0%
ACCTGCATGGTAATCGGAGA+CGG + chr4.2:17231707-17231726 MS.gene028285:CDS 50.0%
AGAATGGATGGCTGGTAGGT+TGG - chr4.2:17233994-17234013 None:intergenic 50.0%
AGGGGAAGGCTTGGGAAAAA+AGG + chr4.2:17230781-17230800 MS.gene028285:intron 50.0%
CAACAGAATGGATGGCTGGT+AGG - chr4.2:17233998-17234017 None:intergenic 50.0%
CAAGTAAGTGGCCAAACCGA+GGG + chr4.2:17234401-17234420 MS.gene028285:CDS 50.0%
CACAGTTGTGATGGCAAGGA+GGG + chr4.2:17234484-17234503 MS.gene028285:CDS 50.0%
CAGAGTCTTGGCGTCGTTTA+TGG + chr4.2:17230202-17230221 MS.gene028285:CDS 50.0%
CGGCTTGCATATCAGAGTCT+TGG + chr4.2:17230190-17230209 MS.gene028285:CDS 50.0%
CTCGGAGACGTAGGCATAAT+TGG + chr4.2:17232530-17232549 MS.gene028285:intron 50.0%
GAATAACTGCAGGGATGCTG+GGG + chr4.2:17234442-17234461 MS.gene028285:CDS 50.0%
GCTGGGGTGGTTCACATATT+AGG + chr4.2:17234458-17234477 MS.gene028285:CDS 50.0%
GGTTGGAGGAACGTGAATCA+TGG + chr4.2:17231651-17231670 MS.gene028285:CDS 50.0%
GTATCTCTCTTCTTCCGGGA+CGG - chr4.2:17234057-17234076 None:intergenic 50.0%
GTCTCGATGGCATGGATTCT+CGG + chr4.2:17233870-17233889 MS.gene028285:CDS 50.0%
GTGCCACACATCGAAAGATG+TGG - chr4.2:17234109-17234128 None:intergenic 50.0%
GTTTGCGAGTTTGAAGGGGA+AGG + chr4.2:17230757-17230776 MS.gene028285:intron 50.0%
TCAAGTAAGTGGCCAAACCG+AGG + chr4.2:17234400-17234419 MS.gene028285:CDS 50.0%
TCTCGATGGCATGGATTCTC+GGG + chr4.2:17233871-17233890 MS.gene028285:CDS 50.0%
TTTCGATGTGTGGCACGGTA+TGG + chr4.2:17234113-17234132 MS.gene028285:CDS 50.0%
! ATCGGCTGTTGGTGGGATTA+AGG + chr4.2:17231873-17231892 MS.gene028285:CDS 50.0%
! CGCCGACCTATCTCATTTTC+CGG + chr4.2:17232737-17232756 MS.gene028285:CDS 50.0%
! GTGTAGACTAGTCCGATTCC+AGG - chr4.2:17233927-17233946 None:intergenic 50.0%
!! AGGAGGGTTTTTGGGGGTTT+TGG + chr4.2:17230918-17230937 MS.gene028285:intron 50.0%
!! AGGCTTTGTTTGCGAGTTGG+AGG - chr4.2:17231123-17231142 None:intergenic 50.0%
!! AGGGTTTTTGGGGGTTTTGG+AGG + chr4.2:17230921-17230940 MS.gene028285:intron 50.0%
!! ATAGCGGCATTGGCTGCTAT+TGG + chr4.2:17230629-17230648 MS.gene028285:intron 50.0%
!! GAGTGGTTTGCTGCATTAGC+TGG + chr4.2:17230664-17230683 MS.gene028285:intron 50.0%
!! GCTTTGTTTGCGAGTTGGAG+GGG - chr4.2:17231121-17231140 None:intergenic 50.0%
!! GGCTTTGTTTGCGAGTTGGA+GGG - chr4.2:17231122-17231141 None:intergenic 50.0%
!!! GGGTTTTTGGGGGTTTTGGA+GGG + chr4.2:17230922-17230941 MS.gene028285:intron 50.0%
AGGAAAAATGGGAGGGGGGA+GGG + chr4.2:17230826-17230845 MS.gene028285:intron 55.0%
AGGAAGAGGCAGGAAGACTC+AGG + chr4.2:17229852-17229871 MS.gene028285:CDS 55.0%
AGGGGAAGGGAAGGCTTCTA+GGG - chr4.2:17231098-17231117 None:intergenic 55.0%
AGGTCCTGCGGTCAAGTAAG+TGG + chr4.2:17234389-17234408 MS.gene028285:CDS 55.0%
AGTAAGTGGCCAAACCGAGG+GGG + chr4.2:17234403-17234422 MS.gene028285:CDS 55.0%
ATGGCATGGATTCTCGGGCT+TGG + chr4.2:17233876-17233895 MS.gene028285:CDS 55.0%
CAAGTTCATCCCCCTCGGTT+TGG - chr4.2:17234415-17234434 None:intergenic 55.0%
CCACATGTGTCTGTGTGTGC+CGG - chr4.2:17232983-17233002 None:intergenic 55.0%
CCTGCATGGTAATCGGAGAC+GGG + chr4.2:17231708-17231727 MS.gene028285:CDS 55.0%
CCTTCCTGTTTACACCGTCC+CGG + chr4.2:17234040-17234059 MS.gene028285:CDS 55.0%
CGAGTTTGAAGGGGAAGGGA+GGG + chr4.2:17230762-17230781 MS.gene028285:intron 55.0%
CTTCCTGCCTCTTCCTCCAT+AGG - chr4.2:17229848-17229867 None:intergenic 55.0%
GAAGCTTGACCAGCCTATGG+AGG + chr4.2:17229832-17229851 MS.gene028285:CDS 55.0%
GAGTTTGAAGGGGAAGGGAG+GGG + chr4.2:17230763-17230782 MS.gene028285:intron 55.0%
GCAAGCTGTACAGCTGAGAC+CGG - chr4.2:17232759-17232778 None:intergenic 55.0%
GCATAATTGGCCGAACTCCG+TGG + chr4.2:17232543-17232562 MS.gene028285:intron 55.0%
GCTGGCACCTGCATGGTAAT+CGG + chr4.2:17231701-17231720 MS.gene028285:CDS 55.0%
GGTCATTGAGCCCTGTGGTA+CGG + chr4.2:17232415-17232434 MS.gene028285:intron 55.0%
TAACACGGACACGAGACACC+AGG - chr4.2:17233074-17233093 None:intergenic 55.0%
TACCCCTGAACCGTACCACA+GGG - chr4.2:17232428-17232447 None:intergenic 55.0%
TCTTCCGGGACGGTGTAAAC+AGG - chr4.2:17234047-17234066 None:intergenic 55.0%
TGACCAGCCTATGGAGGAAG+AGG + chr4.2:17229838-17229857 MS.gene028285:CDS 55.0%
TTACCATGCAGGTGCCAGCA+AGG - chr4.2:17231700-17231719 None:intergenic 55.0%
TTACCCCTGAACCGTACCAC+AGG - chr4.2:17232429-17232448 None:intergenic 55.0%
TTCGTCGGTGCGATGCTGAT+TGG - chr4.2:17231567-17231586 None:intergenic 55.0%
TTGGCCACTTACTTGACCGC+AGG - chr4.2:17234396-17234415 None:intergenic 55.0%
! ATTTTCGAACCCGGCCGTGA+CGG - chr4.2:17233472-17233491 None:intergenic 55.0%
! CAAGGATGGACTTCCCTTGG+TGG + chr4.2:17232265-17232284 MS.gene028285:CDS 55.0%
! GGTGCGATGCTGATTGGGAA+TGG - chr4.2:17231561-17231580 None:intergenic 55.0%
! TCGTCGGTGCGATGCTGATT+GGG - chr4.2:17231566-17231585 None:intergenic 55.0%
! TGTCGCCTGGCTTGCAACTA+TGG - chr4.2:17233307-17233326 None:intergenic 55.0%
! TGTTTGCGAGTTGGAGGGGA+GGG - chr4.2:17231117-17231136 None:intergenic 55.0%
! TTGTTTGCGAGTTGGAGGGG+AGG - chr4.2:17231118-17231137 None:intergenic 55.0%
AGCCCTGTGGTACGGTTCAG+GGG + chr4.2:17232423-17232442 MS.gene028285:intron 60.0%
CAGCCTATGGAGGAAGAGGC+AGG + chr4.2:17229842-17229861 MS.gene028285:CDS 60.0%
CCCGTCTCCGATTACCATGC+AGG - chr4.2:17231711-17231730 None:intergenic 60.0%
CCGGCACACACAGACACATG+TGG + chr4.2:17232980-17232999 MS.gene028285:intron 60.0%
CCGGGACGGTGTAAACAGGA+AGG - chr4.2:17234043-17234062 None:intergenic 60.0%
CGGAGACGGGATTCTTACCC+CGG + chr4.2:17231721-17231740 MS.gene028285:CDS 60.0%
CTCGGGCTTGGCCCAAGTTT+AGG + chr4.2:17233888-17233907 MS.gene028285:CDS 60.0%
CTGCCTCTTCCTCCATAGGC+TGG - chr4.2:17229844-17229863 None:intergenic 60.0%
CTTTGCATTGCCGTCACGGC+CGG + chr4.2:17233459-17233478 MS.gene028285:CDS 60.0%
GAGCCCTGTGGTACGGTTCA+GGG + chr4.2:17232422-17232441 MS.gene028285:intron 60.0%
GAGGAAAAATGGGAGGGGGG+AGG + chr4.2:17230825-17230844 MS.gene028285:intron 60.0%
GAGGGGAAGGGAAGGCTTCT+AGG - chr4.2:17231099-17231118 None:intergenic 60.0%
GCGAGTTTGAAGGGGAAGGG+AGG + chr4.2:17230761-17230780 MS.gene028285:intron 60.0%
GGCAGCCATAGTTGCAAGCC+AGG + chr4.2:17233299-17233318 MS.gene028285:CDS 60.0%
GGGGAAGGGAAGGCTTCTAG+GGG - chr4.2:17231097-17231116 None:intergenic 60.0%
GGGTAGGTCATTGAGCCCTG+TGG + chr4.2:17232410-17232429 MS.gene028285:intron 60.0%
GGTACTGCACTCGGAGACGT+AGG + chr4.2:17232521-17232540 MS.gene028285:intron 60.0%
TAACTGCAGGGATGCTGGGG+TGG + chr4.2:17234445-17234464 MS.gene028285:CDS 60.0%
TATTGGTGTGGCGCTGCCAC+TGG + chr4.2:17233664-17233683 MS.gene028285:CDS 60.0%
TGAGCCCTGTGGTACGGTTC+AGG + chr4.2:17232421-17232440 MS.gene028285:intron 60.0%
TGTCCTTGCTGGCACCTGCA+TGG + chr4.2:17231694-17231713 MS.gene028285:CDS 60.0%
TTGAAGGGGAAGGGAGGGGA+AGG + chr4.2:17230767-17230786 MS.gene028285:intron 60.0%
TTTGCATTGCCGTCACGGCC+GGG + chr4.2:17233460-17233479 MS.gene028285:CDS 60.0%
! AATGGGAGGGGGGAGGGTTT+TGG + chr4.2:17230832-17230851 MS.gene028285:intron 60.0%
! ATGGGAGGGGGGAGGGTTTT+GGG + chr4.2:17230833-17230852 MS.gene028285:intron 60.0%
! GAAGGGAAGGCTTCTAGGGG+TGG - chr4.2:17231094-17231113 None:intergenic 60.0%
! GTGTCTGTGTGTGCCGGTGT+CGG - chr4.2:17232977-17232996 None:intergenic 60.0%
! GTTTGCGAGTTGGAGGGGAG+GGG - chr4.2:17231116-17231135 None:intergenic 60.0%
GGGAAGGGAGGGGAAGGCTT+GGG + chr4.2:17230773-17230792 MS.gene028285:intron 65.0%
TTGGAGGGGAGGGGAAGGGA+AGG - chr4.2:17231107-17231126 None:intergenic 65.0%
! CGAGTTGGAGGGGAGGGGAA+GGG - chr4.2:17231111-17231130 None:intergenic 65.0%
! TGGGAGGGGGGAGGGTTTTG+GGG + chr4.2:17230834-17230853 MS.gene028285:intron 65.0%
GGGGAAGGGAGGGGAAGGCT+TGG + chr4.2:17230772-17230791 MS.gene028285:intron 70.0%
! GCGAGTTGGAGGGGAGGGGA+AGG - chr4.2:17231112-17231131 None:intergenic 70.0%
!! GGGAGGGGGGAGGGTTTTGG+GGG + chr4.2:17230835-17230854 MS.gene028285:intron 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 17229767 17234640 17229767 ID=MS.gene028285
chr4.2 mRNA 17229767 17234640 17229767 ID=MS.gene028285.t1;Parent=MS.gene028285
chr4.2 exon 17229767 17229892 17229767 ID=MS.gene028285.t1.exon1;Parent=MS.gene028285.t1
chr4.2 CDS 17229767 17229892 17229767 ID=cds.MS.gene028285.t1;Parent=MS.gene028285.t1
chr4.2 exon 17230166 17230391 17230166 ID=MS.gene028285.t1.exon2;Parent=MS.gene028285.t1
chr4.2 CDS 17230166 17230391 17230166 ID=cds.MS.gene028285.t1;Parent=MS.gene028285.t1
chr4.2 exon 17231507 17231752 17231507 ID=MS.gene028285.t1.exon3;Parent=MS.gene028285.t1
chr4.2 CDS 17231507 17231752 17231507 ID=cds.MS.gene028285.t1;Parent=MS.gene028285.t1
chr4.2 exon 17231869 17231919 17231869 ID=MS.gene028285.t1.exon4;Parent=MS.gene028285.t1
chr4.2 CDS 17231869 17231919 17231869 ID=cds.MS.gene028285.t1;Parent=MS.gene028285.t1
chr4.2 exon 17232047 17232307 17232047 ID=MS.gene028285.t1.exon5;Parent=MS.gene028285.t1
chr4.2 CDS 17232047 17232307 17232047 ID=cds.MS.gene028285.t1;Parent=MS.gene028285.t1
chr4.2 exon 17232721 17232888 17232721 ID=MS.gene028285.t1.exon6;Parent=MS.gene028285.t1
chr4.2 CDS 17232721 17232888 17232721 ID=cds.MS.gene028285.t1;Parent=MS.gene028285.t1
chr4.2 exon 17233262 17233516 17233262 ID=MS.gene028285.t1.exon7;Parent=MS.gene028285.t1
chr4.2 CDS 17233262 17233516 17233262 ID=cds.MS.gene028285.t1;Parent=MS.gene028285.t1
chr4.2 exon 17233607 17234640 17233607 ID=MS.gene028285.t1.exon8;Parent=MS.gene028285.t1
chr4.2 CDS 17233607 17234640 17233607 ID=cds.MS.gene028285.t1;Parent=MS.gene028285.t1
Gene Sequence

>MS.gene028285

ATGGCTTCAAGAGTGGACACTGATGAAGAGGGTGATAACAAAGGTAGTATGTGGGATTTGGAACAGAAGCTTGACCAGCCTATGGAGGAAGAGGCAGGAAGACTCAGGAATATGTACAGAGAAAAAGTATGATATACTACTATAGTCTATGGATTTAACATTGTCTCTCTTTCCTCATATTGATTTTCTTTTTGGTAGACAAAATGGTATATTCATTATTACTGATTAATTTTCTCAATTTATAATGAAACCAATGTTTGTGATTATGATTTTTAAATTCGATTATTCGATTAAGAAGTCGAGAATTTTCCGTGTTTTACTGATGCACTGATAAGCTAATATGTAAGCTCTTGGAATTTGGTGTATAATTCTTTGTTGACGAAGTTTTTATTTGTGCAGAAATTTTCTGCATTGTTGATTCTGCGGCTTGCATATCAGAGTCTTGGCGTCGTTTATGGAGATTTGGGAACTTCACCCTTGTATGTTTTCTACAATATATTTCCGAACGGTGTGAAAGATGAAGAGGAAGTACTTGGAGCTCTTTCTTTGATTATCTACTCTCTTACCTTGGTGCCTCTTCTCAAATATGTTTTTATTGTGTTAAGAGCAAATGACAATGGACAAGGTATCAATTGTTTTCTAAACTTTTGGTCCTTGAGATTGTACAAAGGGAATACTTAGTAGTGTATTGCAAATTTACAAAATGAAACGAGAATCCACTCCTTTTGTTTCAATTTGTAATGATGATTCCCACAGTGTATATTTAGTGTAGTTAATATTTGCATCTTTTATGGTAATGTTTGCCAGATACAAATTTAAAAAGGGAACTGTATGTTAAATTCGAAGTAATCAATAGCATGCTATAGCGGCATTGGCTGCTATTGGAAATCTGTAGCAGAGTGGTTTGCTGCATTAGCTGGTGTGTCTGCTTTAGTGCCAAAATTGCAACTGCTAAATGCTTCAGAAAAAAGGATGGTTATATTAGGCTTTGTTTGCGAGTTTGAAGGGGAAGGGAGGGGAAGGCTTGGGAAAAAAGGAATGAGCAAGTGGATGAAATAGAGGAAAAATGGGAGGGGGGAGGGTTTTGGGGGTTAACTTTTCTTCATAATACTAAACCCTTCTCATTTGGGGGAACTAAAAAATTGTATTGGAGGAGGGTTTTTGGGGGTTTTGGAGGGTTTACATGAATTCTTCAAATTTAATCTATGTTGTTATATTATTTTTAAAATTAAGAATATAGTAATCATATGCATTAATTTATCATTATCTAAAAACCTACTCTTTTAATTTTTTTGAAAGATTTCTCCATTTTTCGTCATATTTTCCACCCCTAGAAGCCTTCCCTTCCCCTCCCCTCCAACTCGCAAACAAAGCCTTAGGGATATTTTAAGTATTTCCCTGTTCTAATATAGGGTTATAAACATTGTACTTTAATTTTTAGTTTTATTATGCCTTTAGAGGCAATTTCTTTTTTCTTTTTACTTTTTTGGTTCTATGTTTTGCTCAAGACCTAGGCCATGACTATGTAACTGATAATGCTAAAACGAAAGAGTGCATAGTTTTGTATAGAGTGGATGATATCTGAGTTTGCACCGTAGTTTCATTGTTATCAATATCGAGATTCCTTCCATAACTGTAATTAAAATACTCTAGCTTCGCATATAGATCATTAGACAAGTATGATAGTTTAAGACTTCTAAGCTGCAACAAAGTTTTAGAAAACTGACATTTGTAGAGCAGGTGGAACATTTGCGCTTTATTCTTTGCTTTGCCGACACGCAAAGATAAAAACCATTCCCAATCAGCATCGCACCGACGAAGAACTAACAACATATAGTCGTTCTACCTTCCATGAAAGGTCATTTGCTGCAAAAACTAAAAGATGGTTGGAGGAACGTGAATCATGGAAGAGTGCCATTCTTATTCTTGTCCTTGCTGGCACCTGCATGGTAATCGGAGACGGGATTCTTACCCCGGCTATATCAGGTACATATGCCTTCTCTCTGAAGCTAATTAGTTTTCTCTTTTCATCTTTTCTTGAGTATAATTCTCAATACATCTCCATCTATTTGAAGAGATTCTTATCCATATCTTCCATGTAGTTTTATCGGCTGTTGGTGGGATTAAGGTAAATCAGCCCCATATGAGTAATGGTATGTTCCTACTTCTGTAGCAAGACAGTTTCTTTCTATTTTTGTACCACTATGCATGGAAGCATTTAGTGTTTTTAACGAATTTAAGTTGGGTGATCTTGAAAAGCTTCTTTATCTTTGGATACAGGTGTGGTAGTTCTGATTGCTGTTGTAATATTAGTTGGATTTTTCAGCCTGCAACATTATGGCACAGACAAAGTTAGTTGGCTCTTTGCTCCAATTGTCCTCCTTTGGTTTCTCCTAATAGGAGGTATTGGTATATTTAACATCTGTAAGTATGGAAGCGGAGTTCTAAAAGCCTTTTCTCCTGTTTACATATATCACTATTTTAGAAGAGGTGGAAAACAAGGATGGACTTCCCTTGGTGGTATCATGCTCAGTATAACAGGTAAAATTCAATTTTTGTTGCTTTTGATTTCCTTCCTTTTTTTTTTTTTTATCTCCTTCCTTAATGTAATTAGTGTTGGGCATAGCTCACAGTTTACGGATAGGGTAGGTCATTGAGCCCTGTGGTACGGTTCAGGGGTAATCTTGTAAACCAGACCGTAGTACTTAAATACATTGTACTCTGTAGACCCTAAGCTTTCAGCGATAATGGAAAGGTACTGCACTCGGAGACGTAGGCATAATTGGCCGAACTCCGTGGTTAAATATTGTGTGCTCTCCGCTTGTGTTTTTCATATCTTTTTACTTTTGAACCGAGTTATTGTTCTAACAATTGGTATCGATTAAAATCATTAACAAATGAAGTGAATACTTATTGCTTTTTGTACTTTAACAACTTTTGGATGAATTTATTAGGGACGGAGGCTCTTTTCGCCGACCTATCTCATTTTCCGGTCTCAGCTGTACAGCTTGCATTTACTCTGGTTGTGTTTCCTTGCCTTCTTTTAGCCTATTCTGGACAAGCTGCATACCTTATGAATAACTTGACTCATTCAAAAGATGCTTTTTATCTTTCTATTCCAGGTTAGCTGAACTTTTTACTCTATATTGAAATCTTCATGTCTGGACTATCTACACTGACACTTTCGATTGAAGATGAATCTAGTGTCCGACACCGGCACACACAGACACATGTGGATGTTGCTACATTTAATCATTCCTTTTTCTCAGATTCTTACCTGCGGTGTTAACATGTTAGTCTTGTGCCTGGTGTCTCGTGTCCGTGTTAGTGCGTCATAGTTTCTGGTATACCCATAGAGTTTAAAAATACTGTAGTAATCACCAAGCATATCAACACATCAGAATAGAAAACTGAGGGATGCTTCTCTATTTTTTCTCTTATATTTTTCTAATGGTGTGTCCATTAGACAGATGTTGATTATCTTTAGTTTTGCAGAAAGAATATACTGGCCGGTATTTGTTGTTGCAACAGCGGCAGCCATAGTTGCAAGCCAGGCGACAATAACTGCAACATTTTCGATTATTAAGCAAGCCCTTGCTCATGGTTGTTTCCCTAGAGTTAAAGTTGTATATACATCAAAGAAGTTCGCTGGCCAGATATATAGTCCAGATATCAATTGGGTCCTTATGATTCTTTGCATTGCCGTCACGGCCGGGTTCGAAAATCAAAACCAGATTGGAAATGCTTATGGTAAGTTCTTTTCGTTTGTTGTGAATGTTCCGATGAATATTTTCTCTCAATTAAACATCTGCATGATGTGAATTTACAATTCGTTAACAGGTACTGCAGTGGTGATTGTCTTTCTCGTTACTACATTCCTTATGATTTTAATCATGATATTGGTGTGGCGCTGCCACTGGATTCTTGTACTTGCCTTCACTTGCTTATCATTGATTGTGGAATTGTCATACTTCTTCTCTGTAATCTTCAAAGTTAATCAAGGTGGATGGGTTCCTCTTGTAATTGCCGGAGTGTTTTTTATCATTATGTTTGTCTGGCATTACGGTACAGTGAAACGCTACGAGTTTGAAATGCATAGTAAAGTCTCGATGGCATGGATTCTCGGGCTTGGCCCAAGTTTAGGACTTGTTCGTGTACCTGGAATCGGACTAGTCTACACAGAACTTGCAAGTGGAGTACCACCGATCTTTTCTCATTTCATCACCAACCTACCAGCCATCCATTCTGTTGTTGTTTTCGTATGTGTCAAATACCTTCCTGTTTACACCGTCCCGGAAGAAGAGAGATACCTTGTAAAGAGGATTGGACCTAAGAATTACCACATCTTTCGATGTGTGGCACGGTATGGCTACAAAGACCTGCACAAGAAAGACGAAGAGTTTGAGAAAAAACTCTTTGATAACCTTTCACTGTTTGTTAAGCTTGAATCTATGATGGAAGGTTGTTCAGACTCAGATGAATACAGTTTATATGGAGGACAGCAGGATGGCGTGTTGAATAACAACGGAAGCACGACTTCTTCGAATGTGGAGTTAACAATTAACTCGGTAGATTCAATAGTACAAGTTCGATCACCGCCGCCAAATGTGAATATCACTGTTAGGTCCTGCGGTCAAGTAAGTGGCCAAACCGAGGGGGATGAACTTGAATTTTTGAATAACTGCAGGGATGCTGGGGTGGTTCACATATTAGGAAACACAGTTGTGATGGCAAGGAGGGATTCAAATATTTTCAAGAAAGTAGCTGTTGATTATATATATGCATTTCTTAGGAAAATATGCAGGGAAAATAGTGTGATCTTCAATGTTCCTCATGAGAGTCTCTTAAATGTTGGTCAGATATTCTATGTATAG
Protein sequence

>MS.gene028285.t1

MASRVDTDEEGDNKGSMWDLEQKLDQPMEEEAGRLRNMYREKKFSALLILRLAYQSLGVVYGDLGTSPLYVFYNIFPNGVKDEEEVLGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTFALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFHERSFAAKTKRWLEERESWKSAILILVLAGTCMVIGDGILTPAISVLSAVGGIKVNQPHMSNGVVVLIAVVILVGFFSLQHYGTDKVSWLFAPIVLLWFLLIGGIGIFNICKYGSGVLKAFSPVYIYHYFRRGGKQGWTSLGGIMLSITGTEALFADLSHFPVSAVQLAFTLVVFPCLLLAYSGQAAYLMNNLTHSKDAFYLSIPERIYWPVFVVATAAAIVASQATITATFSIIKQALAHGCFPRVKVVYTSKKFAGQIYSPDINWVLMILCIAVTAGFENQNQIGNAYGTAVVIVFLVTTFLMILIMILVWRCHWILVLAFTCLSLIVELSYFFSVIFKVNQGGWVPLVIAGVFFIIMFVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPPIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERYLVKRIGPKNYHIFRCVARYGYKDLHKKDEEFEKKLFDNLSLFVKLESMMEGCSDSDEYSLYGGQQDGVLNNNGSTTSSNVELTINSVDSIVQVRSPPPNVNITVRSCGQVSGQTEGDELEFLNNCRDAGVVHILGNTVVMARRDSNIFKKVAVDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV