Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023187.t1 | XP_013457360.1 | 98.9 | 788 | 8 | 1 | 1 | 788 | 1 | 787 | 0.00E+00 | 1532.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023187.t1 | Q9SA05 | 74.2 | 799 | 192 | 4 | 1 | 788 | 1 | 796 | 0.0e+00 | 1178.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023187.t1 | A0A072UPX3 | 98.9 | 788 | 8 | 1 | 1 | 788 | 1 | 787 | 0.0e+00 | 1532.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023187 | MS.gene57439 | PPI |
| MS.gene023187 | MS.gene036961 | PPI |
| MS.gene023187 | MS.gene028285 | PPI |
| MS.gene023187 | MS.gene36506 | PPI |
| MS.gene023187 | MS.gene57440 | PPI |
| MS.gene023187 | MS.gene35174 | PPI |
| MS.gene036961 | MS.gene023187 | PPI |
| MS.gene023187 | MS.gene000958 | PPI |
| MS.gene023187 | MS.gene036959 | PPI |
| MS.gene023187 | MS.gene073487 | PPI |
| MS.gene023187 | MS.gene036960 | PPI |
| MS.gene023187 | MS.gene000957 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023187.t1 | MTR_4g094660 | 99.365 | 788 | 4 | 1 | 1 | 788 | 1 | 787 | 0.0 | 1607 |
| MS.gene023187.t1 | MTR_2g438150 | 81.337 | 793 | 139 | 5 | 1 | 788 | 1 | 789 | 0.0 | 1303 |
| MS.gene023187.t1 | MTR_2g438150 | 81.084 | 793 | 141 | 5 | 1 | 788 | 1 | 789 | 0.0 | 1299 |
| MS.gene023187.t1 | MTR_4g094660 | 99.169 | 602 | 4 | 1 | 187 | 788 | 1 | 601 | 0.0 | 1218 |
| MS.gene023187.t1 | MTR_2g438160 | 82.229 | 619 | 110 | 0 | 1 | 619 | 1 | 619 | 0.0 | 1018 |
| MS.gene023187.t1 | MTR_6g033165 | 48.758 | 765 | 362 | 4 | 50 | 788 | 59 | 819 | 0.0 | 741 |
| MS.gene023187.t1 | MTR_5g034500 | 46.717 | 792 | 381 | 11 | 28 | 788 | 1 | 782 | 0.0 | 711 |
| MS.gene023187.t1 | MTR_5g071860 | 46.286 | 754 | 381 | 7 | 42 | 788 | 18 | 754 | 0.0 | 707 |
| MS.gene023187.t1 | MTR_6g007697 | 45.362 | 787 | 393 | 10 | 28 | 788 | 1 | 776 | 0.0 | 696 |
| MS.gene023187.t1 | MTR_7g108480 | 44.386 | 766 | 390 | 5 | 23 | 786 | 40 | 771 | 0.0 | 689 |
| MS.gene023187.t1 | MTR_3g094090 | 46.375 | 800 | 384 | 12 | 28 | 788 | 1 | 794 | 0.0 | 688 |
| MS.gene023187.t1 | MTR_8g063840 | 46.488 | 783 | 386 | 10 | 26 | 788 | 71 | 840 | 0.0 | 684 |
| MS.gene023187.t1 | MTR_4g099260 | 45.761 | 802 | 396 | 12 | 12 | 788 | 28 | 815 | 0.0 | 673 |
| MS.gene023187.t1 | MTR_2g008820 | 45.256 | 780 | 404 | 9 | 22 | 788 | 80 | 849 | 0.0 | 669 |
| MS.gene023187.t1 | MTR_8g063900 | 42.802 | 771 | 373 | 5 | 22 | 786 | 35 | 743 | 0.0 | 654 |
| MS.gene023187.t1 | MTR_5g071630 | 44.177 | 747 | 379 | 10 | 49 | 788 | 10 | 725 | 0.0 | 644 |
| MS.gene023187.t1 | MTR_5g070670 | 44.887 | 753 | 393 | 8 | 52 | 788 | 103 | 849 | 0.0 | 640 |
| MS.gene023187.t1 | MTR_8g099090 | 44.231 | 780 | 398 | 8 | 41 | 788 | 18 | 792 | 0.0 | 637 |
| MS.gene023187.t1 | MTR_5g071827 | 45.388 | 683 | 352 | 6 | 110 | 788 | 1 | 666 | 0.0 | 635 |
| MS.gene023187.t1 | MTR_8g088200 | 42.803 | 792 | 419 | 9 | 18 | 788 | 4 | 782 | 0.0 | 629 |
| MS.gene023187.t1 | MTR_8g022130 | 42.038 | 785 | 413 | 10 | 9 | 788 | 19 | 766 | 0.0 | 620 |
| MS.gene023187.t1 | MTR_8g107510 | 38.889 | 774 | 438 | 13 | 40 | 785 | 13 | 779 | 9.54e-179 | 532 |
| MS.gene023187.t1 | MTR_3g094090 | 44.942 | 603 | 296 | 7 | 219 | 788 | 10 | 609 | 8.23e-172 | 508 |
| MS.gene023187.t1 | MTR_5g034590 | 49.123 | 171 | 87 | 0 | 447 | 617 | 89 | 259 | 4.41e-54 | 191 |
| MS.gene023187.t1 | MTR_5g034590 | 44.186 | 86 | 43 | 1 | 109 | 189 | 5 | 90 | 3.50e-15 | 78.6 |
| MS.gene023187.t1 | MTR_8g022160 | 48.500 | 200 | 99 | 2 | 9 | 207 | 19 | 215 | 1.62e-51 | 181 |
| MS.gene023187.t1 | MTR_1g029310 | 39.683 | 126 | 69 | 2 | 197 | 322 | 12 | 130 | 2.29e-21 | 90.9 |
| MS.gene023187.t1 | MTR_2g438170 | 56.790 | 81 | 26 | 5 | 650 | 725 | 1 | 77 | 5.66e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023187.t1 | AT1G31120 | 76.214 | 803 | 169 | 7 | 1 | 788 | 1 | 796 | 0.0 | 1201 |
| MS.gene023187.t1 | AT2G35060 | 75.500 | 800 | 176 | 6 | 1 | 788 | 1 | 792 | 0.0 | 1197 |
| MS.gene023187.t1 | AT2G35060 | 75.500 | 800 | 176 | 6 | 1 | 788 | 1 | 792 | 0.0 | 1197 |
| MS.gene023187.t1 | AT2G35060 | 75.500 | 800 | 176 | 6 | 1 | 788 | 1 | 792 | 0.0 | 1197 |
| MS.gene023187.t1 | AT2G35060 | 75.406 | 801 | 176 | 7 | 1 | 788 | 1 | 793 | 0.0 | 1192 |
| MS.gene023187.t1 | AT4G19960 | 68.025 | 810 | 234 | 5 | 1 | 788 | 1 | 807 | 0.0 | 1062 |
| MS.gene023187.t1 | AT4G19960 | 66.707 | 826 | 234 | 6 | 1 | 788 | 1 | 823 | 0.0 | 1052 |
| MS.gene023187.t1 | AT4G19960 | 65.909 | 836 | 234 | 6 | 1 | 788 | 1 | 833 | 0.0 | 1048 |
| MS.gene023187.t1 | AT4G19960 | 67.402 | 589 | 175 | 3 | 214 | 788 | 1 | 586 | 0.0 | 780 |
| MS.gene023187.t1 | AT2G40540 | 47.296 | 795 | 384 | 9 | 28 | 788 | 1 | 794 | 0.0 | 704 |
| MS.gene023187.t1 | AT2G40540 | 47.296 | 795 | 384 | 9 | 28 | 788 | 1 | 794 | 0.0 | 704 |
| MS.gene023187.t1 | AT2G40540 | 47.296 | 795 | 384 | 9 | 28 | 788 | 1 | 794 | 0.0 | 704 |
| MS.gene023187.t1 | AT2G40540 | 47.296 | 795 | 384 | 9 | 28 | 788 | 1 | 794 | 0.0 | 704 |
| MS.gene023187.t1 | AT2G40540 | 47.296 | 795 | 384 | 9 | 28 | 788 | 1 | 794 | 0.0 | 704 |
| MS.gene023187.t1 | AT1G60160 | 46.490 | 755 | 388 | 6 | 42 | 788 | 81 | 827 | 0.0 | 698 |
| MS.gene023187.t1 | AT3G02050 | 47.155 | 791 | 385 | 6 | 27 | 788 | 3 | 789 | 0.0 | 698 |
| MS.gene023187.t1 | AT5G14880 | 47.804 | 774 | 372 | 10 | 42 | 788 | 13 | 781 | 0.0 | 691 |
| MS.gene023187.t1 | AT1G70300 | 45.420 | 786 | 400 | 8 | 28 | 788 | 1 | 782 | 0.0 | 683 |
| MS.gene023187.t1 | AT4G13420 | 44.192 | 792 | 418 | 5 | 4 | 786 | 7 | 783 | 0.0 | 678 |
| MS.gene023187.t1 | AT4G33530 | 45.241 | 809 | 408 | 10 | 4 | 788 | 58 | 855 | 0.0 | 669 |
| MS.gene023187.t1 | AT2G30070 | 51.320 | 606 | 292 | 1 | 42 | 644 | 18 | 623 | 0.0 | 657 |
| MS.gene023187.t1 | AT2G30070 | 38.961 | 77 | 47 | 0 | 712 | 788 | 636 | 712 | 1.07e-11 | 68.9 |
| MS.gene023187.t1 | AT5G09400 | 44.908 | 815 | 415 | 10 | 5 | 788 | 47 | 858 | 0.0 | 652 |
| MS.gene023187.t1 | AT4G23640 | 44.948 | 772 | 386 | 9 | 49 | 788 | 11 | 775 | 0.0 | 637 |
| MS.gene023187.t1 | AT4G33530 | 45.779 | 616 | 323 | 4 | 183 | 788 | 13 | 627 | 0.0 | 548 |
| MS.gene023187.t1 | AT2G30070 | 50.398 | 502 | 249 | 0 | 143 | 644 | 2 | 503 | 0.0 | 539 |
| MS.gene023187.t1 | AT2G30070 | 38.961 | 77 | 47 | 0 | 712 | 788 | 516 | 592 | 8.61e-12 | 68.9 |
Find 188 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGAGTCTTGGCGTGGTTTA+TGG | 0.144680 | 4.3:+18630758 | MS.gene023187:CDS |
| ATCGGCTGTTGGTGGGATTA+AGG | 0.255722 | 4.3:+18632035 | MS.gene023187:CDS |
| ACAAGGTATCTCTCTTCTTC+CGG | 0.262164 | 4.3:-18634225 | None:intergenic |
| GCTGGGGTGGTTCACATATT+AGG | 0.264983 | 4.3:+18634624 | MS.gene023187:CDS |
| ATTCTTATTCTTGTCCTTGC+TGG | 0.272064 | 4.3:+18631845 | MS.gene023187:CDS |
| ATTATATATATGCATTTCTT+AGG | 0.280181 | 4.3:+18634703 | MS.gene023187:CDS |
| TGTCGCCTGGCTTGCAACTA+TGG | 0.292518 | 4.3:-18633470 | None:intergenic |
| TTGCTCCAATTGTCCTCCTT+TGG | 0.298318 | 4.3:+18632293 | MS.gene023187:CDS |
| TCAGATGAATACAGTTTATA+TGG | 0.316978 | 4.3:+18634405 | MS.gene023187:CDS |
| CTCCTTTGGTTTCTCCTAAT+AGG | 0.317007 | 4.3:+18632307 | MS.gene023187:CDS |
| TTGCAGCAAATGACCTTTCA+TGG | 0.321779 | 4.3:-18631778 | None:intergenic |
| CTTTGCATTGCCGTCACGGC+AGG | 0.331474 | 4.3:+18633625 | MS.gene023187:CDS |
| CAAAGGTAGTATGTGGGATT+TGG | 0.334435 | 4.3:+18630372 | MS.gene023187:CDS |
| CTCGGGCTTGGCCCAAGTTT+AGG | 0.337026 | 4.3:+18634054 | MS.gene023187:CDS |
| CAAGGTATCTCTCTTCTTCC+GGG | 0.346404 | 4.3:-18634224 | None:intergenic |
| TACCATAAGCATTTCCAATC+TGG | 0.350786 | 4.3:-18633663 | None:intergenic |
| TGTCTGTGCCATAATGTTGC+AGG | 0.356956 | 4.3:-18632255 | None:intergenic |
| ATTCTTACCCCGGCTATATC+AGG | 0.357397 | 4.3:+18631893 | MS.gene023187:CDS |
| CGAAAGATGTGGTAATTCTT+AGG | 0.358981 | 4.3:-18634261 | None:intergenic |
| ATATTTAACATCTGTAAGTA+TGG | 0.359612 | 4.3:+18632340 | MS.gene023187:CDS |
| TATATAGTCCAGATATCAAT+TGG | 0.360279 | 4.3:+18633590 | MS.gene023187:CDS |
| ATATACCAATACCTCCTATT+AGG | 0.365604 | 4.3:-18632321 | None:intergenic |
| AACCAGATTGGAAATGCTTA+TGG | 0.368806 | 4.3:+18633661 | MS.gene023187:CDS |
| ATTATGTTTGTCTGGCATTA+CGG | 0.372759 | 4.3:+18633976 | MS.gene023187:CDS |
| TGATATCTGGACTATATATC+TGG | 0.373074 | 4.3:-18633585 | None:intergenic |
| GTCTCGATGGCATGGATTCT+CGG | 0.378294 | 4.3:+18634036 | MS.gene023187:CDS |
| TCATCGGTGCGATGCTGATT+GGG | 0.380293 | 4.3:-18631725 | None:intergenic |
| TTCATCGGTGCGATGCTGAT+TGG | 0.380303 | 4.3:-18631726 | None:intergenic |
| ATAAGGACCCAATTGATATC+TGG | 0.383547 | 4.3:-18633598 | None:intergenic |
| GGAACATACCATTACTCATA+TGG | 0.384347 | 4.3:-18632068 | None:intergenic |
| TGGGTTCCTCTTGTAATTGC+CGG | 0.384804 | 4.3:+18633940 | MS.gene023187:CDS |
| ATGGCATGGATTCTCGGGCT+TGG | 0.385857 | 4.3:+18634042 | MS.gene023187:CDS |
| GGTATCATGCTCAGTATAAC+AGG | 0.392216 | 4.3:+18632448 | MS.gene023187:CDS |
| TTAGGACTTGTTCGTGTACC+TGG | 0.405042 | 4.3:+18634072 | MS.gene023187:CDS |
| GATTATCTACTCTCTTACCT+TGG | 0.406143 | 4.3:+18630871 | MS.gene023187:CDS |
| TCTTCATCTTTCACACCGTT+CGG | 0.408337 | 4.3:-18630824 | None:intergenic |
| AATGAGTCAAGTTATTCATA+AGG | 0.411947 | 4.3:-18632998 | None:intergenic |
| ATTGCTGTTGTAATATTAGT+TGG | 0.412164 | 4.3:+18632223 | MS.gene023187:CDS |
| GTGTAGACTAGTCCGATTCC+AGG | 0.417435 | 4.3:-18634090 | None:intergenic |
| AAATAGTGATATATGTAAAC+AGG | 0.422030 | 4.3:-18632388 | None:intergenic |
| TTTCTCCTAATAGGAGGTAT+TGG | 0.422505 | 4.3:+18632316 | MS.gene023187:CDS |
| AGAAACCAAAGGAGGACAAT+TGG | 0.429550 | 4.3:-18632298 | None:intergenic |
| TCTTCCGGGACGGTGTAAAC+AGG | 0.434145 | 4.3:-18634210 | None:intergenic |
| ACTCTTCGTCTTTCTTGTGC+AGG | 0.434280 | 4.3:-18634311 | None:intergenic |
| GCTGGCACCTGCATGGTAAT+CGG | 0.439778 | 4.3:+18631863 | MS.gene023187:CDS |
| TTGAATAACTGCAGGGACGC+TGG | 0.441557 | 4.3:+18634606 | MS.gene023187:CDS |
| TCTCGATGGCATGGATTCTC+GGG | 0.451131 | 4.3:+18634037 | MS.gene023187:CDS |
| GTATATACAACTTTAACTCT+AGG | 0.455200 | 4.3:-18633544 | None:intergenic |
| CTTCCTGCCTCTTCCTCCAT+AGG | 0.455502 | 4.3:-18630412 | None:intergenic |
| GTGATAACAAAGGTAGTATG+TGG | 0.456986 | 4.3:+18630365 | MS.gene023187:CDS |
| GGCAGCCATAGTTGCAAGCC+AGG | 0.457567 | 4.3:+18633465 | MS.gene023187:CDS |
| CTAACAGTGATATTCACATT+TGG | 0.460145 | 4.3:-18634534 | None:intergenic |
| TTCGAAAATCAAAACCAGAT+TGG | 0.460880 | 4.3:+18633649 | MS.gene023187:CDS |
| GGCGTGGTTTATGGAGATTT+AGG | 0.461670 | 4.3:+18630767 | MS.gene023187:CDS |
| CAAATGTGAATATCACTGTT+AGG | 0.464701 | 4.3:+18634535 | MS.gene023187:CDS |
| TATTGGTGTGGCGCTGCCAC+TGG | 0.464822 | 4.3:+18633830 | MS.gene023187:CDS |
| ATATCATGATTAAAATCATA+AGG | 0.466363 | 4.3:-18633810 | None:intergenic |
| CTGCCTCTTCCTCCATAGGC+TGG | 0.471158 | 4.3:-18630408 | None:intergenic |
| TGAATAACTGCAGGGACGCT+GGG | 0.476846 | 4.3:+18634607 | MS.gene023187:CDS |
| TGACCAGCCTATGGAGGAAG+AGG | 0.478610 | 4.3:+18630405 | MS.gene023187:CDS |
| GAACATACCATTACTCATAT+GGG | 0.479647 | 4.3:-18632067 | None:intergenic |
| TCAAAGTTAATCAAGGTGGA+TGG | 0.480215 | 4.3:+18633920 | MS.gene023187:CDS |
| CTTGTTCGTGTACCTGGAAT+CGG | 0.484864 | 4.3:+18634078 | MS.gene023187:CDS |
| AGATACCTTGTAAAGAGGAT+TGG | 0.486463 | 4.3:+18634237 | MS.gene023187:CDS |
| TTTCGATGTGTGGCACGGTA+TGG | 0.488737 | 4.3:+18634279 | MS.gene023187:CDS |
| CGGCTTGCATATCAGAGTCT+TGG | 0.492350 | 4.3:+18630746 | MS.gene023187:CDS |
| CCCGTCTCCGATTACCATGC+AGG | 0.492534 | 4.3:-18631870 | None:intergenic |
| CATTTCTTAGGAAAATATGC+AGG | 0.492742 | 4.3:+18634715 | MS.gene023187:CDS |
| TGTACAGCTTGCATTTACTC+TGG | 0.493940 | 4.3:+18632929 | MS.gene023187:CDS |
| ATATGTTGTTAGTTCTTCAT+CGG | 0.496853 | 4.3:-18631741 | None:intergenic |
| ATATATGTAAACAGGAGAAA+AGG | 0.499936 | 4.3:-18632380 | None:intergenic |
| TCAGAAGCTTGACCAGCCTA+TGG | 0.501135 | 4.3:+18630396 | MS.gene023187:CDS |
| AAGAGAGATACCTTGTAAAG+AGG | 0.504738 | 4.3:+18634232 | MS.gene023187:CDS |
| TAGGTCCAATCCTCTTTACA+AGG | 0.508685 | 4.3:-18634242 | None:intergenic |
| GTAATCTTCAAAGTTAATCA+AGG | 0.509932 | 4.3:+18633913 | MS.gene023187:CDS |
| CACTTGCTTATCATTGATTG+TGG | 0.513008 | 4.3:+18633870 | MS.gene023187:CDS |
| ATGGCACAGACAAAGTTAGT+TGG | 0.513478 | 4.3:+18632266 | MS.gene023187:CDS |
| GGTTGGAGGAACGTGAATCA+TGG | 0.513701 | 4.3:+18631813 | MS.gene023187:CDS |
| CTTTGGTTTCTCCTAATAGG+AGG | 0.516527 | 4.3:+18632310 | MS.gene023187:CDS |
| AAAGATGAAGAGGAAGTACT+TGG | 0.516753 | 4.3:+18630836 | MS.gene023187:CDS |
| CAAGCTTAACAAACAGTGAA+AGG | 0.516927 | 4.3:-18634356 | None:intergenic |
| CAGCCTATGGAGGAAGAGGC+AGG | 0.517760 | 4.3:+18630409 | MS.gene023187:CDS |
| ACAGTGATATTCACATTTGG+CGG | 0.519018 | 4.3:-18634531 | None:intergenic |
| ACACGAACAAGTCCTAAACT+TGG | 0.520151 | 4.3:-18634066 | None:intergenic |
| CACAGTTGTGATGGCAAGGA+GGG | 0.523327 | 4.3:+18634650 | MS.gene023187:CDS |
| GTCGTTCTACCTTCCATGAA+AGG | 0.523441 | 4.3:+18631765 | MS.gene023187:CDS |
| TTTAGAAGAGGTGGAAAACA+AGG | 0.524364 | 4.3:+18632409 | MS.gene023187:CDS |
| ACCTGCATGGTAATCGGAGA+CGG | 0.529408 | 4.3:+18631869 | MS.gene023187:CDS |
| AAACAAGGATGGACTTCCCT+TGG | 0.530115 | 4.3:+18632424 | MS.gene023187:CDS |
| CAGTTTATATGGAGGACAGC+AGG | 0.530247 | 4.3:+18634416 | MS.gene023187:CDS |
| GTATGCAGCTTGTCCAGAAT+AGG | 0.531509 | 4.3:-18632976 | None:intergenic |
| ATGTTGCAGTTATTGTCGCC+TGG | 0.531764 | 4.3:-18633483 | None:intergenic |
| GATTCTTTGCATTGCCGTCA+CGG | 0.532435 | 4.3:+18633621 | MS.gene023187:CDS |
| CGGCAATGCAAAGAATCATA+AGG | 0.533751 | 4.3:-18633615 | None:intergenic |
| GCATATGTACCTGATATAGC+CGG | 0.535287 | 4.3:-18631902 | None:intergenic |
| CTGAGACCGGAAAATGAGAT+AGG | 0.535427 | 4.3:-18632905 | None:intergenic |
| GCTGTTGCAACAACAAATAC+CGG | 0.537816 | 4.3:-18633442 | None:intergenic |
| CAAAGTTAATCAAGGTGGAT+GGG | 0.539107 | 4.3:+18633921 | MS.gene023187:CDS |
| TGTTAAGCTTGAATCTATGA+TGG | 0.539727 | 4.3:+18634368 | MS.gene023187:CDS |
| ATTAAGCAAGCCCTTGCTCA+TGG | 0.540837 | 4.3:+18633514 | MS.gene023187:CDS |
| AGCAAGGACAAGAATAAGAA+TGG | 0.541082 | 4.3:-18631843 | None:intergenic |
| TGTCCTTGCTGGCACCTGCA+TGG | 0.541400 | 4.3:+18631856 | MS.gene023187:CDS |
| CATATGTACCTGATATAGCC+GGG | 0.543217 | 4.3:-18631901 | None:intergenic |
| AACATCTGTAAGTATGGAAG+CGG | 0.546719 | 4.3:+18632346 | MS.gene023187:CDS |
| GCAAGCTGTACAGCTGAGAC+CGG | 0.546898 | 4.3:-18632918 | None:intergenic |
| CAAGGATGGACTTCCCTTGG+TGG | 0.548086 | 4.3:+18632427 | MS.gene023187:CDS |
| TATATACAACTTTAACTCTA+GGG | 0.551474 | 4.3:-18633543 | None:intergenic |
| ATCTGGACTATATATCTGGC+CGG | 0.553085 | 4.3:-18633581 | None:intergenic |
| GGTGCGATGCTGATTGGGAA+TGG | 0.553849 | 4.3:-18631720 | None:intergenic |
| CATGAGAGTCTCTTAAATGT+TGG | 0.554708 | 4.3:+18634765 | MS.gene023187:CDS |
| TTTCTGCATTGTTGATTCTG+CGG | 0.554902 | 4.3:+18630726 | MS.gene023187:CDS |
| ACAACAACAGAATGGATGGC+TGG | 0.560974 | 4.3:-18634165 | None:intergenic |
| AGGTCCTGCGGTCAAGTAAG+TGG | 0.564330 | 4.3:+18634555 | MS.gene023187:CDS |
| AGGAAGAGGCAGGAAGACTC+AGG | 0.565443 | 4.3:+18630419 | MS.gene023187:CDS |
| TTTGCATTGCCGTCACGGCA+GGG | 0.565906 | 4.3:+18633626 | MS.gene023187:CDS |
| TAGGGAAACAACCATGAGCA+AGG | 0.568381 | 4.3:-18633525 | None:intergenic |
| CCTTCCTGTTTACACCGTCC+CGG | 0.569084 | 4.3:+18634206 | MS.gene023187:CDS |
| TTGGCCACTTACTTGACCGC+AGG | 0.570429 | 4.3:-18634559 | None:intergenic |
| GCTGAAAATGGCTTCAAGAG+TGG | 0.573798 | 4.3:+18630327 | None:intergenic |
| CAAGTAAGTGGCCAAACCGA+GGG | 0.574154 | 4.3:+18634567 | MS.gene023187:CDS |
| AATCAGCCCCATATGAGTAA+TGG | 0.574491 | 4.3:+18632060 | MS.gene023187:CDS |
| CAACAGAATGGATGGCTGGT+AGG | 0.574816 | 4.3:-18634161 | None:intergenic |
| AGCAAATGACCTTTCATGGA+AGG | 0.576121 | 4.3:-18631774 | None:intergenic |
| TAACTGCAGGGACGCTGGGG+TGG | 0.576829 | 4.3:+18634611 | MS.gene023187:CDS |
| TATACATCAAAGAAGTTCGC+CGG | 0.578486 | 4.3:+18633562 | MS.gene023187:CDS |
| GAATAGGCTAAAAGAAGGCA+AGG | 0.578682 | 4.3:-18632960 | None:intergenic |
| TGCAGAAAGAATATACTGGC+CGG | 0.579503 | 4.3:+18633423 | MS.gene023187:intron |
| CGGAGACGGGATTCTTACCC+CGG | 0.579878 | 4.3:+18631883 | MS.gene023187:CDS |
| AAGAGTGGACACTGATGAAG+AGG | 0.581426 | 4.3:+18630342 | MS.gene023187:CDS |
| GTATCTCTCTTCTTCCGGGA+CGG | 0.583221 | 4.3:-18634220 | None:intergenic |
| GTCCAGAATAGGCTAAAAGA+AGG | 0.583432 | 4.3:-18632965 | None:intergenic |
| GTCTACACAGAACTTGCAAG+TGG | 0.583444 | 4.3:+18634105 | MS.gene023187:CDS |
| AGAATGGATGGCTGGTAGGT+TGG | 0.583797 | 4.3:-18634157 | None:intergenic |
| CCTGCATGGTAATCGGAGAC+GGG | 0.583917 | 4.3:+18631870 | MS.gene023187:CDS |
| ATTAGGAAACACAGTTGTGA+TGG | 0.587624 | 4.3:+18634641 | MS.gene023187:CDS |
| TTCTACAACATATTTCCGAA+CGG | 0.589094 | 4.3:+18630809 | MS.gene023187:CDS |
| GAAACACAGTTGTGATGGCA+AGG | 0.591010 | 4.3:+18634646 | MS.gene023187:CDS |
| GAAGAGGTGGAAAACAAGGA+TGG | 0.591042 | 4.3:+18632413 | MS.gene023187:CDS |
| GTGATATTCACATTTGGCGG+CGG | 0.592182 | 4.3:-18634528 | None:intergenic |
| GAACGGTGTGAAAGATGAAG+AGG | 0.595547 | 4.3:+18630826 | MS.gene023187:CDS |
| ATATAGTCCAGATATCAATT+GGG | 0.598472 | 4.3:+18633591 | MS.gene023187:CDS |
| TGATAACAAAGGTAGTATGT+GGG | 0.599126 | 4.3:+18630366 | MS.gene023187:CDS |
| TCAAGTAAGTGGCCAAACCG+AGG | 0.600769 | 4.3:+18634566 | MS.gene023187:CDS |
| TTACCACATCTTTCGATGTG+TGG | 0.605821 | 4.3:+18634269 | MS.gene023187:CDS |
| GGTATTTGTTGTTGCAACAG+CGG | 0.608649 | 4.3:+18633444 | MS.gene023187:CDS |
| GACCGGAAAATGAGATAGGT+CGG | 0.608967 | 4.3:-18632901 | None:intergenic |
| CACGAACAAGTCCTAAACTT+GGG | 0.614583 | 4.3:-18634065 | None:intergenic |
| TGCATATCAGAGTCTTGGCG+TGG | 0.618746 | 4.3:+18630751 | MS.gene023187:CDS |
| ATAGTAAAGTCTCGATGGCA+TGG | 0.620677 | 4.3:+18634028 | MS.gene023187:CDS |
| AATATCACTGTTAGGTCCTG+CGG | 0.624494 | 4.3:+18634543 | MS.gene023187:CDS |
| AAGCACGACTTCTTCGAATG+TGG | 0.624780 | 4.3:+18634461 | MS.gene023187:CDS |
| AATCAATGATAAGCAAGTGA+AGG | 0.625371 | 4.3:-18633866 | None:intergenic |
| ATTTCTTAGGAAAATATGCA+GGG | 0.625694 | 4.3:+18634716 | MS.gene023187:CDS |
| AACACTCCGGCAATTACAAG+AGG | 0.633389 | 4.3:-18633946 | None:intergenic |
| ATCTTCAAAGTTAATCAAGG+TGG | 0.637689 | 4.3:+18633916 | MS.gene023187:CDS |
| AATGCATAGTAAAGTCTCGA+TGG | 0.638063 | 4.3:+18634023 | MS.gene023187:CDS |
| GAAGCTTGACCAGCCTATGG+AGG | 0.640712 | 4.3:+18630399 | MS.gene023187:CDS |
| AAGCTTGAATCTATGATGGA+AGG | 0.641141 | 4.3:+18634372 | MS.gene023187:CDS |
| AGGGAAACAACCATGAGCAA+GGG | 0.643819 | 4.3:-18633524 | None:intergenic |
| GAATAACTGCAGGGACGCTG+GGG | 0.645282 | 4.3:+18634608 | MS.gene023187:CDS |
| ACATCTTTCGATGTGTGGCA+CGG | 0.647935 | 4.3:+18634274 | MS.gene023187:CDS |
| AACATACCATTACTCATATG+GGG | 0.653081 | 4.3:-18632066 | None:intergenic |
| GATGAATACAGTTTATATGG+AGG | 0.656772 | 4.3:+18634408 | MS.gene023187:CDS |
| CCGGGACGGTGTAAACAGGA+AGG | 0.657637 | 4.3:-18634206 | None:intergenic |
| GATGAATTTATTAGGGACGG+AGG | 0.657712 | 4.3:+18632869 | MS.gene023187:intron |
| TTACCATGCAGGTGCCAGCA+AGG | 0.657855 | 4.3:-18631859 | None:intergenic |
| GATGAAGAGGGTGATAACAA+AGG | 0.665526 | 4.3:+18630355 | MS.gene023187:CDS |
| TTATATGGAGGACAGCAGGA+TGG | 0.666470 | 4.3:+18634420 | MS.gene023187:CDS |
| ACACAGTTGTGATGGCAAGG+AGG | 0.669872 | 4.3:+18634649 | MS.gene023187:CDS |
| AGAGCAAATGACAATGGACA+AGG | 0.674340 | 4.3:+18630926 | MS.gene023187:CDS |
| TTTGTTAACAGGTACTGCAG+TGG | 0.676356 | 4.3:+18633762 | MS.gene023187:intron |
| GTGTTAAGAGCAAATGACAA+TGG | 0.677304 | 4.3:+18630920 | MS.gene023187:CDS |
| GTGCCACACATCGAAAGATG+TGG | 0.686236 | 4.3:-18634272 | None:intergenic |
| ATGTTGTAGAAAACATACAA+AGG | 0.686924 | 4.3:-18630797 | None:intergenic |
| GTGATGAAATGAGAAAAGAT+CGG | 0.689117 | 4.3:-18634135 | None:intergenic |
| AAGTAAGTGGCCAAACCGAG+GGG | 0.689786 | 4.3:+18634568 | MS.gene023187:CDS |
| TACTGAGCATGATACCACCA+AGG | 0.690342 | 4.3:-18632441 | None:intergenic |
| ACTGAGCATGATACCACCAA+GGG | 0.691706 | 4.3:-18632440 | None:intergenic |
| CTCCTATTAGGAGAAACCAA+AGG | 0.694794 | 4.3:-18632309 | None:intergenic |
| AGAGTGGACACTGATGAAGA+GGG | 0.700617 | 4.3:+18630343 | MS.gene023187:CDS |
| CTATTAGGAGAAACCAAAGG+AGG | 0.702161 | 4.3:-18632306 | None:intergenic |
| ATGAAATGAGAAAAGATCGG+TGG | 0.702922 | 4.3:-18634132 | None:intergenic |
| AGTAAGTGGCCAAACCGAGG+GGG | 0.709182 | 4.3:+18634569 | MS.gene023187:CDS |
| ATATGTACCTGATATAGCCG+GGG | 0.713157 | 4.3:-18631900 | None:intergenic |
| ATATTTGAGAAGAGGCACCA+AGG | 0.717350 | 4.3:-18630888 | None:intergenic |
| ACATTTAAGAGACTCTCATG+AGG | 0.718347 | 4.3:-18634762 | None:intergenic |
| GATGGCGTGTTGAATAACAA+CGG | 0.731429 | 4.3:+18634438 | MS.gene023187:CDS |
| AGGCGAGTACAAGAATCCAG+TGG | 0.751362 | 4.3:-18633846 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATCATGATTAAAATCATA+AGG | - | chr4.3:18633813-18633832 | None:intergenic | 15.0% |
| !! | ATTATATATATGCATTTCTT+AGG | + | chr4.3:18634703-18634722 | MS.gene023187:CDS | 15.0% |
| !!! | CTTTTTTCTTTTTACTTTTT+TGG | + | chr4.3:18631396-18631415 | MS.gene023187:intron | 15.0% |
| !!! | TATGATTTTAATCATGATAT+TGG | + | chr4.3:18633813-18633832 | MS.gene023187:CDS | 15.0% |
| !! | AAAAAAGGATGGTTATATTA+GGG | + | chr4.3:18631287-18631306 | MS.gene023187:intron | 20.0% |
| !! | AAATAGTGATATATGTAAAC+AGG | - | chr4.3:18632391-18632410 | None:intergenic | 20.0% |
| !! | AATTGAGAGAAAATATTCAT+TGG | - | chr4.3:18633715-18633734 | None:intergenic | 20.0% |
| !! | AGGAGATCAAAAAAAAAAAA+AGG | - | chr4.3:18632507-18632526 | None:intergenic | 20.0% |
| !! | ATAAAAACATATTTGAGAAG+AGG | - | chr4.3:18630899-18630918 | None:intergenic | 20.0% |
| !! | ATATTTAACATCTGTAAGTA+TGG | + | chr4.3:18632340-18632359 | MS.gene023187:CDS | 20.0% |
| !! | GATCAAAAAAAAAAAAAGGA+AGG | - | chr4.3:18632503-18632522 | None:intergenic | 20.0% |
| !! | TATATACAACTTTAACTCTA+GGG | - | chr4.3:18633546-18633565 | None:intergenic | 20.0% |
| !!! | AACTTTTGGATGAATTTATT+AGG | + | chr4.3:18632861-18632880 | MS.gene023187:intron | 20.0% |
| !!! | ACTTTTGGATGAATTTATTA+GGG | + | chr4.3:18632862-18632881 | MS.gene023187:intron | 20.0% |
| !!! | ATATATCACTATTTTAGAAG+AGG | + | chr4.3:18632397-18632416 | MS.gene023187:CDS | 20.0% |
| !!! | ATTTTAATTACAGTTATGGA+AGG | - | chr4.3:18631555-18631574 | None:intergenic | 20.0% |
| !!! | GAGTATTTTAATTACAGTTA+TGG | - | chr4.3:18631559-18631578 | None:intergenic | 20.0% |
| !!! | GTTAATATTTGCATCTTTTA+TGG | + | chr4.3:18631094-18631113 | MS.gene023187:intron | 20.0% |
| !!! | GTTTTTAACGAATTTAAGTT+GGG | + | chr4.3:18632152-18632171 | MS.gene023187:intron | 20.0% |
| !!! | TATTGATAACAATGAAACTA+CGG | - | chr4.3:18631524-18631543 | None:intergenic | 20.0% |
| !!! | TCAATTGTTTTCTAAACTTT+TGG | + | chr4.3:18630951-18630970 | MS.gene023187:intron | 20.0% |
| !!! | TGAATTTACAATTTGTTAAC+AGG | + | chr4.3:18633751-18633770 | MS.gene023187:intron | 20.0% |
| !!! | TGTTTTTAACGAATTTAAGT+TGG | + | chr4.3:18632151-18632170 | MS.gene023187:intron | 20.0% |
| !!! | TTTCTCTTATATTTTTCGAA+TGG | + | chr4.3:18633360-18633379 | MS.gene023187:intron | 20.0% |
| !!! | TTTCTTTTTGGTAGATAAAA+TGG | + | chr4.3:18630515-18630534 | MS.gene023187:intron | 20.0% |
| !!! | TTTTGTACTTTAACAACTTT+TGG | + | chr4.3:18632847-18632866 | MS.gene023187:intron | 20.0% |
| !!! | TTTTTATCATTATGTTTGTC+TGG | + | chr4.3:18633968-18633987 | MS.gene023187:CDS | 20.0% |
| ! | AAAAAAGAAATTGCCTCTAA+AGG | - | chr4.3:18631383-18631402 | None:intergenic | 25.0% |
| ! | AAAAACACAATCACAAACAT+TGG | - | chr4.3:18630584-18630603 | None:intergenic | 25.0% |
| ! | AACACTAATTACATTAAGGA+AGG | - | chr4.3:18632527-18632546 | None:intergenic | 25.0% |
| ! | AATGAGTCAAGTTATTCATA+AGG | - | chr4.3:18633001-18633020 | None:intergenic | 25.0% |
| ! | AGAGACAATGTTAAATTCAT+AGG | - | chr4.3:18630479-18630498 | None:intergenic | 25.0% |
| ! | ATAAAACTACATGGAAGATA+TGG | - | chr4.3:18632017-18632036 | None:intergenic | 25.0% |
| ! | ATACAAAAACAACAACAGAA+TGG | - | chr4.3:18634176-18634195 | None:intergenic | 25.0% |
| ! | ATATAGTCCAGATATCAATT+GGG | + | chr4.3:18633591-18633610 | MS.gene023187:CDS | 25.0% |
| ! | ATATATGTAAACAGGAGAAA+AGG | - | chr4.3:18632383-18632402 | None:intergenic | 25.0% |
| ! | ATGTTGTAGAAAACATACAA+AGG | - | chr4.3:18630800-18630819 | None:intergenic | 25.0% |
| ! | ATTTCTTAGGAAAATATGCA+GGG | + | chr4.3:18634716-18634735 | MS.gene023187:CDS | 25.0% |
| ! | CAATTGTTAGAACAATAACT+CGG | - | chr4.3:18632783-18632802 | None:intergenic | 25.0% |
| ! | CATAATGATAAAAAACACTC+CGG | - | chr4.3:18633962-18633981 | None:intergenic | 25.0% |
| ! | CCAAAAAGAAAATCAATATG+AGG | - | chr4.3:18630506-18630525 | None:intergenic | 25.0% |
| ! | GAAAAAAGGATGGTTATATT+AGG | + | chr4.3:18631286-18631305 | MS.gene023187:intron | 25.0% |
| ! | GCCAGATACAAATTTAAAAA+GGG | + | chr4.3:18631125-18631144 | MS.gene023187:intron | 25.0% |
| ! | GTAATCTTCAAAGTTAATCA+AGG | + | chr4.3:18633913-18633932 | MS.gene023187:CDS | 25.0% |
| ! | GTATATACAACTTTAACTCT+AGG | - | chr4.3:18633547-18633566 | None:intergenic | 25.0% |
| ! | TAAGAATCTCTTCAAATAGA+TGG | - | chr4.3:18631993-18632012 | None:intergenic | 25.0% |
| ! | TATAACCCTATATTAGAACA+GGG | - | chr4.3:18631328-18631347 | None:intergenic | 25.0% |
| ! | TATATAGTCCAGATATCAAT+TGG | + | chr4.3:18633590-18633609 | MS.gene023187:CDS | 25.0% |
| ! | TATATTGAAATCTTCATGTC+TGG | + | chr4.3:18633071-18633090 | MS.gene023187:intron | 25.0% |
| ! | TATTTCCCTGTTCTAATATA+GGG | + | chr4.3:18631320-18631339 | MS.gene023187:intron | 25.0% |
| ! | TCAGATGAATACAGTTTATA+TGG | + | chr4.3:18634405-18634424 | MS.gene023187:CDS | 25.0% |
| ! | TCATTACAAATGGAAACAAA+AGG | - | chr4.3:18631047-18631066 | None:intergenic | 25.0% |
| ! | TCCTTAATGTAATTAGTGTT+GGG | + | chr4.3:18632527-18632546 | MS.gene023187:intron | 25.0% |
| ! | TGCCAGATACAAATTTAAAA+AGG | + | chr4.3:18631124-18631143 | MS.gene023187:intron | 25.0% |
| ! | TTATAACCCTATATTAGAAC+AGG | - | chr4.3:18631329-18631348 | None:intergenic | 25.0% |
| ! | TTCCTTAATGTAATTAGTGT+TGG | + | chr4.3:18632526-18632545 | MS.gene023187:intron | 25.0% |
| ! | TTGAAAAGCTTCTTTATCTT+TGG | + | chr4.3:18632180-18632199 | MS.gene023187:intron | 25.0% |
| !! | ACAGTATTTTCAAACTCTAT+GGG | - | chr4.3:18633281-18633300 | None:intergenic | 25.0% |
| !! | ATATGTTGTTAGTTCTTCAT+CGG | - | chr4.3:18631744-18631763 | None:intergenic | 25.0% |
| !! | ATTGCTGTTGTAATATTAGT+TGG | + | chr4.3:18632223-18632242 | MS.gene023187:CDS | 25.0% |
| !! | TACAGTATTTTCAAACTCTA+TGG | - | chr4.3:18633282-18633301 | None:intergenic | 25.0% |
| !! | TCCCTTTTTAAATTTGTATC+TGG | - | chr4.3:18631129-18631148 | None:intergenic | 25.0% |
| !! | TGAATTTTTGAATAACTGCA+GGG | + | chr4.3:18634599-18634618 | MS.gene023187:CDS | 25.0% |
| !! | TTGAATTTTTGAATAACTGC+AGG | + | chr4.3:18634598-18634617 | MS.gene023187:CDS | 25.0% |
| !! | TTTTAATCATGATATTGGTG+TGG | + | chr4.3:18633818-18633837 | MS.gene023187:CDS | 25.0% |
| !!! | CCTCATATTGATTTTCTTTT+TGG | + | chr4.3:18630503-18630522 | MS.gene023187:intron | 25.0% |
| !!! | TAGTTTTATTATGCCTTTAG+AGG | + | chr4.3:18631367-18631386 | MS.gene023187:intron | 25.0% |
| !!! | TATCTTCCATGTAGTTTTAT+CGG | + | chr4.3:18632017-18632036 | MS.gene023187:intron | 25.0% |
| AAAAACAACAACAGAATGGA+TGG | - | chr4.3:18634172-18634191 | None:intergenic | 30.0% | |
| AAAAACTAAAAGATGGTTGG+AGG | + | chr4.3:18631799-18631818 | MS.gene023187:CDS | 30.0% | |
| AAAGATACGAAAAACACAAG+CGG | - | chr4.3:18632749-18632768 | None:intergenic | 30.0% | |
| AAATGCTTCAGAAAAAAGGA+TGG | + | chr4.3:18631276-18631295 | MS.gene023187:intron | 30.0% | |
| AACATACCATTACTCATATG+GGG | - | chr4.3:18632069-18632088 | None:intergenic | 30.0% | |
| AATCAATGATAAGCAAGTGA+AGG | - | chr4.3:18633869-18633888 | None:intergenic | 30.0% | |
| ACATCAGAATAGAAAACTGA+GGG | + | chr4.3:18633323-18633342 | MS.gene023187:intron | 30.0% | |
| ACTACACTAAATATACACTG+TGG | - | chr4.3:18631076-18631095 | None:intergenic | 30.0% | |
| ATATACCAATACCTCCTATT+AGG | - | chr4.3:18632324-18632343 | None:intergenic | 30.0% | |
| ATATGTAAGCTCTTGGAATT+TGG | + | chr4.3:18630661-18630680 | MS.gene023187:intron | 30.0% | |
| ATCAACATCTAAGTGTCTAA+TGG | - | chr4.3:18633391-18633410 | None:intergenic | 30.0% | |
| ATCTTCAAAGTTAATCAAGG+TGG | + | chr4.3:18633916-18633935 | MS.gene023187:CDS | 30.0% | |
| ATTAGTGCATCAGTAAAACA+CGG | - | chr4.3:18630635-18630654 | None:intergenic | 30.0% | |
| ATTATGTTTGTCTGGCATTA+CGG | + | chr4.3:18633976-18633995 | MS.gene023187:CDS | 30.0% | |
| CAAATGTGAATATCACTGTT+AGG | + | chr4.3:18634535-18634554 | MS.gene023187:CDS | 30.0% | |
| CATTATCAGTTACATAGTCA+TGG | - | chr4.3:18631447-18631466 | None:intergenic | 30.0% | |
| CATTTCTTAGGAAAATATGC+AGG | + | chr4.3:18634715-18634734 | MS.gene023187:CDS | 30.0% | |
| CGAGTTATTGTTCTAACAAT+TGG | + | chr4.3:18632781-18632800 | MS.gene023187:intron | 30.0% | |
| CTAACAGTGATATTCACATT+TGG | - | chr4.3:18634537-18634556 | None:intergenic | 30.0% | |
| CTACACTAAATATACACTGT+GGG | - | chr4.3:18631075-18631094 | None:intergenic | 30.0% | |
| GAACATACCATTACTCATAT+GGG | - | chr4.3:18632070-18632089 | None:intergenic | 30.0% | |
| GATGAATACAGTTTATATGG+AGG | + | chr4.3:18634408-18634427 | MS.gene023187:CDS | 30.0% | |
| GTATTTCCCTGTTCTAATAT+AGG | + | chr4.3:18631319-18631338 | MS.gene023187:intron | 30.0% | |
| GTGATGAAATGAGAAAAGAT+CGG | - | chr4.3:18634138-18634157 | None:intergenic | 30.0% | |
| TAAGCTAATATGTAAGCTCT+TGG | + | chr4.3:18630654-18630673 | MS.gene023187:intron | 30.0% | |
| TAATCAATAGCATGCTATAG+CGG | + | chr4.3:18631169-18631188 | MS.gene023187:intron | 30.0% | |
| TGATAACAAAGGTAGTATGT+GGG | + | chr4.3:18630366-18630385 | MS.gene023187:CDS | 30.0% | |
| TGATATCTGGACTATATATC+TGG | - | chr4.3:18633588-18633607 | None:intergenic | 30.0% | |
| TGCAAAAACTAAAAGATGGT+TGG | + | chr4.3:18631796-18631815 | MS.gene023187:CDS | 30.0% | |
| TGCTAAATGCTTCAGAAAAA+AGG | + | chr4.3:18631272-18631291 | MS.gene023187:intron | 30.0% | |
| TGTATTTAAGTACTACGATC+TGG | - | chr4.3:18632623-18632642 | None:intergenic | 30.0% | |
| TGTTAAGCTTGAATCTATGA+TGG | + | chr4.3:18634368-18634387 | MS.gene023187:CDS | 30.0% | |
| TTCGAAAATCAAAACCAGAT+TGG | + | chr4.3:18633649-18633668 | MS.gene023187:CDS | 30.0% | |
| TTCTACAACATATTTCCGAA+CGG | + | chr4.3:18630809-18630828 | MS.gene023187:CDS | 30.0% | |
| TTGCTGCAAAAACTAAAAGA+TGG | + | chr4.3:18631792-18631811 | MS.gene023187:CDS | 30.0% | |
| TTGGATGAATTTATTAGGGA+CGG | + | chr4.3:18632866-18632885 | MS.gene023187:intron | 30.0% | |
| ! | GCTTTTTATCTTTCTATTCC+AGG | + | chr4.3:18633029-18633048 | MS.gene023187:CDS | 30.0% |
| ! | GTTTTGCAGAAAGAATATAC+TGG | + | chr4.3:18633419-18633438 | MS.gene023187:intron | 30.0% |
| !! | TATCACTATTTTAGAAGAGG+TGG | + | chr4.3:18632400-18632419 | MS.gene023187:CDS | 30.0% |
| !! | TATTTTTGTACCACTATGCA+TGG | + | chr4.3:18632118-18632137 | MS.gene023187:intron | 30.0% |
| AAAACTGACATTTGTAGAGC+AGG | + | chr4.3:18631647-18631666 | MS.gene023187:intron | 35.0% | |
| AACATCTGTAAGTATGGAAG+CGG | + | chr4.3:18632346-18632365 | MS.gene023187:CDS | 35.0% | |
| AACCAGATTGGAAATGCTTA+TGG | + | chr4.3:18633661-18633680 | MS.gene023187:CDS | 35.0% | |
| AAGAGAGATACCTTGTAAAG+AGG | + | chr4.3:18634232-18634251 | MS.gene023187:CDS | 35.0% | |
| AATGCATAGTAAAGTCTCGA+TGG | + | chr4.3:18634023-18634042 | MS.gene023187:CDS | 35.0% | |
| AATTGTCTTGCTACAGAAGT+AGG | - | chr4.3:18632092-18632111 | None:intergenic | 35.0% | |
| ACAAATGGAAACAAAAGGAG+TGG | - | chr4.3:18631042-18631061 | None:intergenic | 35.0% | |
| ACACTGACACTTTAGATTGA+AGG | + | chr4.3:18633101-18633120 | MS.gene023187:intron | 35.0% | |
| ACAGTGATATTCACATTTGG+CGG | - | chr4.3:18634534-18634553 | None:intergenic | 35.0% | |
| ACATTTAAGAGACTCTCATG+AGG | - | chr4.3:18634765-18634784 | None:intergenic | 35.0% | |
| AGATACCTTGTAAAGAGGAT+TGG | + | chr4.3:18634237-18634256 | MS.gene023187:CDS | 35.0% | |
| AGCAAGGACAAGAATAAGAA+TGG | - | chr4.3:18631846-18631865 | None:intergenic | 35.0% | |
| AGTAAAAAGTTCAGCTAACC+TGG | - | chr4.3:18633050-18633069 | None:intergenic | 35.0% | |
| ATAAGGACCCAATTGATATC+TGG | - | chr4.3:18633601-18633620 | None:intergenic | 35.0% | |
| ATAGCTCACAGTTTATGGAT+AGG | + | chr4.3:18632551-18632570 | MS.gene023187:intron | 35.0% | |
| ATGAAATGAGAAAAGATCGG+TGG | - | chr4.3:18634135-18634154 | None:intergenic | 35.0% | |
| ATTAGGAAACACAGTTGTGA+TGG | + | chr4.3:18634641-18634660 | MS.gene023187:CDS | 35.0% | |
| ATTCCCTTTGTACAATCTCA+AGG | - | chr4.3:18630978-18630997 | None:intergenic | 35.0% | |
| ATTCTTATTCTTGTCCTTGC+TGG | + | chr4.3:18631845-18631864 | MS.gene023187:CDS | 35.0% | |
| CAAAGTTAATCAAGGTGGAT+GGG | + | chr4.3:18633921-18633940 | MS.gene023187:CDS | 35.0% | |
| CAAGCTTAACAAACAGTGAA+AGG | - | chr4.3:18634359-18634378 | None:intergenic | 35.0% | |
| CAATATTTAACCACGGAGTT+CGG | - | chr4.3:18632718-18632737 | None:intergenic | 35.0% | |
| CACATCAGAATAGAAAACTG+AGG | + | chr4.3:18633322-18633341 | MS.gene023187:intron | 35.0% | |
| CAGGTAAGAATCTGAGAAAA+AGG | - | chr4.3:18633189-18633208 | None:intergenic | 35.0% | |
| CATGAGAGTCTCTTAAATGT+TGG | + | chr4.3:18634765-18634784 | MS.gene023187:CDS | 35.0% | |
| CGAAAGATGTGGTAATTCTT+AGG | - | chr4.3:18634264-18634283 | None:intergenic | 35.0% | |
| GAGCACACAATATTTAACCA+CGG | - | chr4.3:18632725-18632744 | None:intergenic | 35.0% | |
| GATTATCTACTCTCTTACCT+TGG | + | chr4.3:18630871-18630890 | MS.gene023187:CDS | 35.0% | |
| GCCCAACACTAATTACATTA+AGG | - | chr4.3:18632531-18632550 | None:intergenic | 35.0% | |
| GCTTCTTTATCTTTGGATAC+AGG | + | chr4.3:18632187-18632206 | MS.gene023187:intron | 35.0% | |
| GGAACATACCATTACTCATA+TGG | - | chr4.3:18632071-18632090 | None:intergenic | 35.0% | |
| GTGATAACAAAGGTAGTATG+TGG | + | chr4.3:18630365-18630384 | MS.gene023187:CDS | 35.0% | |
| GTGGGAATCATCATTACAAA+TGG | - | chr4.3:18631057-18631076 | None:intergenic | 35.0% | |
| GTGTTAAGAGCAAATGACAA+TGG | + | chr4.3:18630920-18630939 | MS.gene023187:CDS | 35.0% | |
| TACCATAAGCATTTCCAATC+TGG | - | chr4.3:18633666-18633685 | None:intergenic | 35.0% | |
| TAGCTCACAGTTTATGGATA+GGG | + | chr4.3:18632552-18632571 | MS.gene023187:intron | 35.0% | |
| TATACATCAAAGAAGTTCGC+CGG | + | chr4.3:18633562-18633581 | MS.gene023187:CDS | 35.0% | |
| TCAAAGTTAATCAAGGTGGA+TGG | + | chr4.3:18633920-18633939 | MS.gene023187:CDS | 35.0% | |
| TTTAGAAGAGGTGGAAAACA+AGG | + | chr4.3:18632409-18632428 | MS.gene023187:CDS | 35.0% | |
| TTTATCTTTGGATACAGGTG+TGG | + | chr4.3:18632192-18632211 | MS.gene023187:intron | 35.0% | |
| ! | AAGCTTGAATCTATGATGGA+AGG | + | chr4.3:18634372-18634391 | MS.gene023187:CDS | 35.0% |
| ! | ACTAATTAGCTTCAGAGAGA+AGG | - | chr4.3:18631927-18631946 | None:intergenic | 35.0% |
| ! | CACTTGCTTATCATTGATTG+TGG | + | chr4.3:18633870-18633889 | MS.gene023187:CDS | 35.0% |
| ! | GCATTTAGCAGTTGCAATTT+TGG | - | chr4.3:18631262-18631281 | None:intergenic | 35.0% |
| ! | TGGTTTTTATCTTTGCGTGT+CGG | - | chr4.3:18631703-18631722 | None:intergenic | 35.0% |
| ! | TTCTGATGTGTTGATATGCT+TGG | - | chr4.3:18633312-18633331 | None:intergenic | 35.0% |
| ! | TTTCTCCTAATAGGAGGTAT+TGG | + | chr4.3:18632316-18632335 | MS.gene023187:CDS | 35.0% |
| ! | TTTTCTCAGATTCTTACCTG+CGG | + | chr4.3:18633189-18633208 | MS.gene023187:intron | 35.0% |
| !! | AAAGATGAAGAGGAAGTACT+TGG | + | chr4.3:18630836-18630855 | MS.gene023187:CDS | 35.0% |
| !! | TTTCTGCATTGTTGATTCTG+CGG | + | chr4.3:18630726-18630745 | MS.gene023187:CDS | 35.0% |
| !! | TTTTTCAGCCTGCAACATTA+TGG | + | chr4.3:18632247-18632266 | MS.gene023187:CDS | 35.0% |
| !!! | GTGCATAGTTTTGTATAGAG+TGG | + | chr4.3:18631480-18631499 | MS.gene023187:intron | 35.0% |
| AATATCACTGTTAGGTCCTG+CGG | + | chr4.3:18634543-18634562 | MS.gene023187:CDS | 40.0% | |
| AATCAGCCCCATATGAGTAA+TGG | + | chr4.3:18632060-18632079 | MS.gene023187:CDS | 40.0% | |
| ACACGAACAAGTCCTAAACT+TGG | - | chr4.3:18634069-18634088 | None:intergenic | 40.0% | |
| AGAAACCAAAGGAGGACAAT+TGG | - | chr4.3:18632301-18632320 | None:intergenic | 40.0% | |
| AGAGCAAATGACAATGGACA+AGG | + | chr4.3:18630926-18630945 | MS.gene023187:CDS | 40.0% | |
| AGCAAATGACCTTTCATGGA+AGG | - | chr4.3:18631777-18631796 | None:intergenic | 40.0% | |
| ATAGTAAAGTCTCGATGGCA+TGG | + | chr4.3:18634028-18634047 | MS.gene023187:CDS | 40.0% | |
| ATATGTACCTGATATAGCCG+GGG | - | chr4.3:18631903-18631922 | None:intergenic | 40.0% | |
| ATCTGGACTATATATCTGGC+CGG | - | chr4.3:18633584-18633603 | None:intergenic | 40.0% | |
| ATGGCACAGACAAAGTTAGT+TGG | + | chr4.3:18632266-18632285 | MS.gene023187:CDS | 40.0% | |
| ATTGGAAATCTGTAGCAGAG+TGG | + | chr4.3:18631203-18631222 | MS.gene023187:intron | 40.0% | |
| CAAAGGTAGTATGTGGGATT+TGG | + | chr4.3:18630372-18630391 | MS.gene023187:CDS | 40.0% | |
| CAACAGCCGATAAAACTACA+TGG | - | chr4.3:18632026-18632045 | None:intergenic | 40.0% | |
| CACGAACAAGTCCTAAACTT+GGG | - | chr4.3:18634068-18634087 | None:intergenic | 40.0% | |
| CATATGTACCTGATATAGCC+GGG | - | chr4.3:18631904-18631923 | None:intergenic | 40.0% | |
| CGGCAATGCAAAGAATCATA+AGG | - | chr4.3:18633618-18633637 | None:intergenic | 40.0% | |
| CTAAATGCTTCCATGCATAG+TGG | - | chr4.3:18632131-18632150 | None:intergenic | 40.0% | |
| CTATTAGGAGAAACCAAAGG+AGG | - | chr4.3:18632309-18632328 | None:intergenic | 40.0% | |
| CTCCTATTAGGAGAAACCAA+AGG | - | chr4.3:18632312-18632331 | None:intergenic | 40.0% | |
| GAAACTATGACGCACTAACA+CGG | - | chr4.3:18633251-18633270 | None:intergenic | 40.0% | |
| GAATAGGCTAAAAGAAGGCA+AGG | - | chr4.3:18632963-18632982 | None:intergenic | 40.0% | |
| GATGAAGAGGGTGATAACAA+AGG | + | chr4.3:18630355-18630374 | MS.gene023187:CDS | 40.0% | |
| GATGAATTTATTAGGGACGG+AGG | + | chr4.3:18632869-18632888 | MS.gene023187:intron | 40.0% | |
| GATGGCGTGTTGAATAACAA+CGG | + | chr4.3:18634438-18634457 | MS.gene023187:CDS | 40.0% | |
| GCATATGTACCTGATATAGC+CGG | - | chr4.3:18631905-18631924 | None:intergenic | 40.0% | |
| GCTGTTGCAACAACAAATAC+CGG | - | chr4.3:18633445-18633464 | None:intergenic | 40.0% | |
| GGTATCATGCTCAGTATAAC+AGG | + | chr4.3:18632448-18632467 | MS.gene023187:CDS | 40.0% | |
| GGTCCTTGAGATTGTACAAA+GGG | + | chr4.3:18630972-18630991 | MS.gene023187:intron | 40.0% | |
| GTCCAGAATAGGCTAAAAGA+AGG | - | chr4.3:18632968-18632987 | None:intergenic | 40.0% | |
| TAGGTCCAATCCTCTTTACA+AGG | - | chr4.3:18634245-18634264 | None:intergenic | 40.0% | |
| TCACAGTTTATGGATAGGGT+AGG | + | chr4.3:18632556-18632575 | MS.gene023187:intron | 40.0% | |
| TCTTCATCTTTCACACCGTT+CGG | - | chr4.3:18630827-18630846 | None:intergenic | 40.0% | |
| TGCAGAAAGAATATACTGGC+CGG | + | chr4.3:18633423-18633442 | MS.gene023187:intron | 40.0% | |
| TGGTCCTTGAGATTGTACAA+AGG | + | chr4.3:18630971-18630990 | MS.gene023187:intron | 40.0% | |
| TGTACAGCTTGCATTTACTC+TGG | + | chr4.3:18632929-18632948 | MS.gene023187:CDS | 40.0% | |
| TGTTAGTGCGTCATAGTTTC+TGG | + | chr4.3:18633251-18633270 | MS.gene023187:intron | 40.0% | |
| TTACCACATCTTTCGATGTG+TGG | + | chr4.3:18634269-18634288 | MS.gene023187:CDS | 40.0% | |
| TTGCAGCAAATGACCTTTCA+TGG | - | chr4.3:18631781-18631800 | None:intergenic | 40.0% | |
| ! | AAATTCAAGTTCATCCCCCT+CGG | - | chr4.3:18634586-18634605 | None:intergenic | 40.0% |
| ! | ACAAGGTATCTCTCTTCTTC+CGG | - | chr4.3:18634228-18634247 | None:intergenic | 40.0% |
| ! | CTATGTTTTGCTCAAGACCT+AGG | + | chr4.3:18631421-18631440 | MS.gene023187:intron | 40.0% |
| ! | CTCCTTTGGTTTCTCCTAAT+AGG | + | chr4.3:18632307-18632326 | MS.gene023187:CDS | 40.0% |
| ! | CTTTGGTTTCTCCTAATAGG+AGG | + | chr4.3:18632310-18632329 | MS.gene023187:CDS | 40.0% |
| ! | TGCCTTCTTTTAGCCTATTC+TGG | + | chr4.3:18632963-18632982 | MS.gene023187:CDS | 40.0% |
| ! | TTTGTTAACAGGTACTGCAG+TGG | + | chr4.3:18633762-18633781 | MS.gene023187:intron | 40.0% |
| !! | ATATTTGAGAAGAGGCACCA+AGG | - | chr4.3:18630891-18630910 | None:intergenic | 40.0% |
| !! | GGTATTTGTTGTTGCAACAG+CGG | + | chr4.3:18633444-18633463 | MS.gene023187:CDS | 40.0% |
| !! | TAACATGTTAGTCTTGTGCC+TGG | + | chr4.3:18633215-18633234 | MS.gene023187:intron | 40.0% |
| !! | TAATGGAAAGGTACTGCACT+CGG | + | chr4.3:18632674-18632693 | MS.gene023187:intron | 40.0% |
| !!! | CATGTAGTTTTATCGGCTGT+TGG | + | chr4.3:18632024-18632043 | MS.gene023187:intron | 40.0% |
| !!! | TAGTTTTATCGGCTGTTGGT+GGG | + | chr4.3:18632028-18632047 | MS.gene023187:intron | 40.0% |
| AACACTCCGGCAATTACAAG+AGG | - | chr4.3:18633949-18633968 | None:intergenic | 45.0% | |
| AAGAGTGGACACTGATGAAG+AGG | + | chr4.3:18630342-18630361 | MS.gene023187:CDS | 45.0% | |
| AAGCACGACTTCTTCGAATG+TGG | + | chr4.3:18634461-18634480 | MS.gene023187:CDS | 45.0% | |
| ACAACAACAGAATGGATGGC+TGG | - | chr4.3:18634168-18634187 | None:intergenic | 45.0% | |
| ACATCTTTCGATGTGTGGCA+CGG | + | chr4.3:18634274-18634293 | MS.gene023187:CDS | 45.0% | |
| ACTCTTCGTCTTTCTTGTGC+AGG | - | chr4.3:18634314-18634333 | None:intergenic | 45.0% | |
| ACTGACATTTGTAGAGCAGG+TGG | + | chr4.3:18631650-18631669 | MS.gene023187:intron | 45.0% | |
| ACTGAGCATGATACCACCAA+GGG | - | chr4.3:18632443-18632462 | None:intergenic | 45.0% | |
| AGAGTGGACACTGATGAAGA+GGG | + | chr4.3:18630343-18630362 | MS.gene023187:CDS | 45.0% | |
| AGGGAAACAACCATGAGCAA+GGG | - | chr4.3:18633527-18633546 | None:intergenic | 45.0% | |
| ATAGCATGCTATAGCGGCAT+TGG | + | chr4.3:18631175-18631194 | MS.gene023187:intron | 45.0% | |
| ATGTTGCAGTTATTGTCGCC+TGG | - | chr4.3:18633486-18633505 | None:intergenic | 45.0% | |
| ATTAAGCAAGCCCTTGCTCA+TGG | + | chr4.3:18633514-18633533 | MS.gene023187:CDS | 45.0% | |
| ATTCTTACCCCGGCTATATC+AGG | + | chr4.3:18631893-18631912 | MS.gene023187:CDS | 45.0% | |
| CAGTTACATAGTCATGGCCT+AGG | - | chr4.3:18631441-18631460 | None:intergenic | 45.0% | |
| CAGTTTATATGGAGGACAGC+AGG | + | chr4.3:18634416-18634435 | MS.gene023187:CDS | 45.0% | |
| CCATTATCGCCGAAAGCTTA+GGG | - | chr4.3:18632660-18632679 | None:intergenic | 45.0% | |
| CTCTGTAGACCCTAAGCTTT+CGG | + | chr4.3:18632648-18632667 | MS.gene023187:intron | 45.0% | |
| CTGAGACCGGAAAATGAGAT+AGG | - | chr4.3:18632908-18632927 | None:intergenic | 45.0% | |
| CTTGTTCGTGTACCTGGAAT+CGG | + | chr4.3:18634078-18634097 | MS.gene023187:CDS | 45.0% | |
| GAAACACAGTTGTGATGGCA+AGG | + | chr4.3:18634646-18634665 | MS.gene023187:CDS | 45.0% | |
| GAACGGTGTGAAAGATGAAG+AGG | + | chr4.3:18630826-18630845 | MS.gene023187:CDS | 45.0% | |
| GAAGAGGTGGAAAACAAGGA+TGG | + | chr4.3:18632413-18632432 | MS.gene023187:CDS | 45.0% | |
| GACCGGAAAATGAGATAGGT+CGG | - | chr4.3:18632904-18632923 | None:intergenic | 45.0% | |
| GACTAACATGTTAACACCGC+AGG | - | chr4.3:18633208-18633227 | None:intergenic | 45.0% | |
| GATTCTTTGCATTGCCGTCA+CGG | + | chr4.3:18633621-18633640 | MS.gene023187:CDS | 45.0% | |
| GGCGTGGTTTATGGAGATTT+AGG | + | chr4.3:18630767-18630786 | MS.gene023187:CDS | 45.0% | |
| GTATGCAGCTTGTCCAGAAT+AGG | - | chr4.3:18632979-18632998 | None:intergenic | 45.0% | |
| GTCGTTCTACCTTCCATGAA+AGG | + | chr4.3:18631765-18631784 | MS.gene023187:CDS | 45.0% | |
| GTCTACACAGAACTTGCAAG+TGG | + | chr4.3:18634105-18634124 | MS.gene023187:CDS | 45.0% | |
| GTGAATCTAGTGTCCAACAC+CGG | + | chr4.3:18633123-18633142 | MS.gene023187:intron | 45.0% | |
| GTGATATTCACATTTGGCGG+CGG | - | chr4.3:18634531-18634550 | None:intergenic | 45.0% | |
| TACTGAGCATGATACCACCA+AGG | - | chr4.3:18632444-18632463 | None:intergenic | 45.0% | |
| TAGGGAAACAACCATGAGCA+AGG | - | chr4.3:18633528-18633547 | None:intergenic | 45.0% | |
| TCCATTATCGCCGAAAGCTT+AGG | - | chr4.3:18632661-18632680 | None:intergenic | 45.0% | |
| TGGGCATAGCTCACAGTTTA+TGG | + | chr4.3:18632546-18632565 | MS.gene023187:intron | 45.0% | |
| TGGGTTCCTCTTGTAATTGC+CGG | + | chr4.3:18633940-18633959 | MS.gene023187:CDS | 45.0% | |
| TGTCTGTGCCATAATGTTGC+AGG | - | chr4.3:18632258-18632277 | None:intergenic | 45.0% | |
| TTATATGGAGGACAGCAGGA+TGG | + | chr4.3:18634420-18634439 | MS.gene023187:CDS | 45.0% | |
| TTGCTCCAATTGTCCTCCTT+TGG | + | chr4.3:18632293-18632312 | MS.gene023187:CDS | 45.0% | |
| ! | AAACAAGGATGGACTTCCCT+TGG | + | chr4.3:18632424-18632443 | MS.gene023187:CDS | 45.0% |
| ! | CAAGGTATCTCTCTTCTTCC+GGG | - | chr4.3:18634227-18634246 | None:intergenic | 45.0% |
| ! | TTAGGACTTGTTCGTGTACC+TGG | + | chr4.3:18634072-18634091 | MS.gene023187:CDS | 45.0% |
| !! | AGCTTTCGGCGATAATGGAA+AGG | + | chr4.3:18632662-18632681 | MS.gene023187:intron | 45.0% |
| !!! | GTAGTTTTATCGGCTGTTGG+TGG | + | chr4.3:18632027-18632046 | MS.gene023187:intron | 45.0% |
| AAGTAAGTGGCCAAACCGAG+GGG | + | chr4.3:18634568-18634587 | MS.gene023187:CDS | 50.0% | |
| ACACAGTTGTGATGGCAAGG+AGG | + | chr4.3:18634649-18634668 | MS.gene023187:CDS | 50.0% | |
| ACCTGCATGGTAATCGGAGA+CGG | + | chr4.3:18631869-18631888 | MS.gene023187:CDS | 50.0% | |
| AGAATGGATGGCTGGTAGGT+TGG | - | chr4.3:18634160-18634179 | None:intergenic | 50.0% | |
| AGGCGAGTACAAGAATCCAG+TGG | - | chr4.3:18633849-18633868 | None:intergenic | 50.0% | |
| CAACAGAATGGATGGCTGGT+AGG | - | chr4.3:18634164-18634183 | None:intergenic | 50.0% | |
| CAAGTAAGTGGCCAAACCGA+GGG | + | chr4.3:18634567-18634586 | MS.gene023187:CDS | 50.0% | |
| CACAGTTGTGATGGCAAGGA+GGG | + | chr4.3:18634650-18634669 | MS.gene023187:CDS | 50.0% | |
| CAGAGTCTTGGCGTGGTTTA+TGG | + | chr4.3:18630758-18630777 | MS.gene023187:CDS | 50.0% | |
| CCCTAAGCTTTCGGCGATAA+TGG | + | chr4.3:18632657-18632676 | MS.gene023187:intron | 50.0% | |
| CGGCTTGCATATCAGAGTCT+TGG | + | chr4.3:18630746-18630765 | MS.gene023187:CDS | 50.0% | |
| CTCGGAGACGTAGGCATAAT+TGG | + | chr4.3:18632692-18632711 | MS.gene023187:intron | 50.0% | |
| GCTGGGGTGGTTCACATATT+AGG | + | chr4.3:18634624-18634643 | MS.gene023187:CDS | 50.0% | |
| GGTTGGAGGAACGTGAATCA+TGG | + | chr4.3:18631813-18631832 | MS.gene023187:CDS | 50.0% | |
| GTATCTCTCTTCTTCCGGGA+CGG | - | chr4.3:18634223-18634242 | None:intergenic | 50.0% | |
| GTCTCGATGGCATGGATTCT+CGG | + | chr4.3:18634036-18634055 | MS.gene023187:CDS | 50.0% | |
| GTGCCACACATCGAAAGATG+TGG | - | chr4.3:18634275-18634294 | None:intergenic | 50.0% | |
| TCAAGTAAGTGGCCAAACCG+AGG | + | chr4.3:18634566-18634585 | MS.gene023187:CDS | 50.0% | |
| TCAGAAGCTTGACCAGCCTA+TGG | + | chr4.3:18630396-18630415 | MS.gene023187:CDS | 50.0% | |
| TCTCGATGGCATGGATTCTC+GGG | + | chr4.3:18634037-18634056 | MS.gene023187:CDS | 50.0% | |
| TGAATAACTGCAGGGACGCT+GGG | + | chr4.3:18634607-18634626 | MS.gene023187:CDS | 50.0% | |
| TGCATATCAGAGTCTTGGCG+TGG | + | chr4.3:18630751-18630770 | MS.gene023187:CDS | 50.0% | |
| TTCATCGGTGCGATGCTGAT+TGG | - | chr4.3:18631729-18631748 | None:intergenic | 50.0% | |
| TTGAATAACTGCAGGGACGC+TGG | + | chr4.3:18634606-18634625 | MS.gene023187:CDS | 50.0% | |
| TTTCGATGTGTGGCACGGTA+TGG | + | chr4.3:18634279-18634298 | MS.gene023187:CDS | 50.0% | |
| ! | ATCGGCTGTTGGTGGGATTA+AGG | + | chr4.3:18632035-18632054 | MS.gene023187:CDS | 50.0% |
| ! | ATTTTCGAACCCTGCCGTGA+CGG | - | chr4.3:18633638-18633657 | None:intergenic | 50.0% |
| ! | CGCCGACCTATCTCATTTTC+CGG | + | chr4.3:18632899-18632918 | MS.gene023187:CDS | 50.0% |
| ! | GTGTAGACTAGTCCGATTCC+AGG | - | chr4.3:18634093-18634112 | None:intergenic | 50.0% |
| ! | TCATCGGTGCGATGCTGATT+GGG | - | chr4.3:18631728-18631747 | None:intergenic | 50.0% |
| !! | ATAGCGGCATTGGCTGCTAT+TGG | + | chr4.3:18631185-18631204 | MS.gene023187:intron | 50.0% |
| !! | GAGTGGTTTGCTGCATTAGC+TGG | + | chr4.3:18631220-18631239 | MS.gene023187:intron | 50.0% |
| AGGAAGAGGCAGGAAGACTC+AGG | + | chr4.3:18630419-18630438 | MS.gene023187:CDS | 55.0% | |
| AGGTCCTGCGGTCAAGTAAG+TGG | + | chr4.3:18634555-18634574 | MS.gene023187:CDS | 55.0% | |
| AGTAAGTGGCCAAACCGAGG+GGG | + | chr4.3:18634569-18634588 | MS.gene023187:CDS | 55.0% | |
| ATGGCATGGATTCTCGGGCT+TGG | + | chr4.3:18634042-18634061 | MS.gene023187:CDS | 55.0% | |
| CAAGTTCATCCCCCTCGGTT+TGG | - | chr4.3:18634581-18634600 | None:intergenic | 55.0% | |
| CCACATGTGTCTGTGTGTGC+CGG | - | chr4.3:18633145-18633164 | None:intergenic | 55.0% | |
| CCTGCATGGTAATCGGAGAC+GGG | + | chr4.3:18631870-18631889 | MS.gene023187:CDS | 55.0% | |
| CCTTCCTGTTTACACCGTCC+CGG | + | chr4.3:18634206-18634225 | MS.gene023187:CDS | 55.0% | |
| CTTCCTGCCTCTTCCTCCAT+AGG | - | chr4.3:18630415-18630434 | None:intergenic | 55.0% | |
| GAAGCTTGACCAGCCTATGG+AGG | + | chr4.3:18630399-18630418 | MS.gene023187:CDS | 55.0% | |
| GAATAACTGCAGGGACGCTG+GGG | + | chr4.3:18634608-18634627 | MS.gene023187:CDS | 55.0% | |
| GCAAGCTGTACAGCTGAGAC+CGG | - | chr4.3:18632921-18632940 | None:intergenic | 55.0% | |
| GCATAATTGGCCGAACTCCG+TGG | + | chr4.3:18632705-18632724 | MS.gene023187:intron | 55.0% | |
| GCTGGCACCTGCATGGTAAT+CGG | + | chr4.3:18631863-18631882 | MS.gene023187:CDS | 55.0% | |
| GGTCATTGAGCCCTGTGGTA+CGG | + | chr4.3:18632577-18632596 | MS.gene023187:intron | 55.0% | |
| TAACACGGACACGAGACACC+AGG | - | chr4.3:18633236-18633255 | None:intergenic | 55.0% | |
| TACCCCTGAACCGTACCACA+GGG | - | chr4.3:18632590-18632609 | None:intergenic | 55.0% | |
| TCTTCCGGGACGGTGTAAAC+AGG | - | chr4.3:18634213-18634232 | None:intergenic | 55.0% | |
| TGACCAGCCTATGGAGGAAG+AGG | + | chr4.3:18630405-18630424 | MS.gene023187:CDS | 55.0% | |
| TTACCATGCAGGTGCCAGCA+AGG | - | chr4.3:18631862-18631881 | None:intergenic | 55.0% | |
| TTACCCCTGAACCGTACCAC+AGG | - | chr4.3:18632591-18632610 | None:intergenic | 55.0% | |
| TTGGCCACTTACTTGACCGC+AGG | - | chr4.3:18634562-18634581 | None:intergenic | 55.0% | |
| TTTGCATTGCCGTCACGGCA+GGG | + | chr4.3:18633626-18633645 | MS.gene023187:CDS | 55.0% | |
| ! | CAAGGATGGACTTCCCTTGG+TGG | + | chr4.3:18632427-18632446 | MS.gene023187:CDS | 55.0% |
| ! | GGTGCGATGCTGATTGGGAA+TGG | - | chr4.3:18631723-18631742 | None:intergenic | 55.0% |
| ! | TGTCGCCTGGCTTGCAACTA+TGG | - | chr4.3:18633473-18633492 | None:intergenic | 55.0% |
| AGCCCTGTGGTACGGTTCAG+GGG | + | chr4.3:18632585-18632604 | MS.gene023187:intron | 60.0% | |
| CAGCCTATGGAGGAAGAGGC+AGG | + | chr4.3:18630409-18630428 | MS.gene023187:CDS | 60.0% | |
| CCCGTCTCCGATTACCATGC+AGG | - | chr4.3:18631873-18631892 | None:intergenic | 60.0% | |
| CCGGCACACACAGACACATG+TGG | + | chr4.3:18633142-18633161 | MS.gene023187:intron | 60.0% | |
| CCGGGACGGTGTAAACAGGA+AGG | - | chr4.3:18634209-18634228 | None:intergenic | 60.0% | |
| CGGAGACGGGATTCTTACCC+CGG | + | chr4.3:18631883-18631902 | MS.gene023187:CDS | 60.0% | |
| CTCGGGCTTGGCCCAAGTTT+AGG | + | chr4.3:18634054-18634073 | MS.gene023187:CDS | 60.0% | |
| CTGCCTCTTCCTCCATAGGC+TGG | - | chr4.3:18630411-18630430 | None:intergenic | 60.0% | |
| CTTTGCATTGCCGTCACGGC+AGG | + | chr4.3:18633625-18633644 | MS.gene023187:CDS | 60.0% | |
| GAGCCCTGTGGTACGGTTCA+GGG | + | chr4.3:18632584-18632603 | MS.gene023187:intron | 60.0% | |
| GGCAGCCATAGTTGCAAGCC+AGG | + | chr4.3:18633465-18633484 | MS.gene023187:CDS | 60.0% | |
| GGGTAGGTCATTGAGCCCTG+TGG | + | chr4.3:18632572-18632591 | MS.gene023187:intron | 60.0% | |
| GGTACTGCACTCGGAGACGT+AGG | + | chr4.3:18632683-18632702 | MS.gene023187:intron | 60.0% | |
| TATTGGTGTGGCGCTGCCAC+TGG | + | chr4.3:18633830-18633849 | MS.gene023187:CDS | 60.0% | |
| TGAGCCCTGTGGTACGGTTC+AGG | + | chr4.3:18632583-18632602 | MS.gene023187:intron | 60.0% | |
| TGTCCTTGCTGGCACCTGCA+TGG | + | chr4.3:18631856-18631875 | MS.gene023187:CDS | 60.0% | |
| ! | GTGTCTGTGTGTGCCGGTGT+TGG | - | chr4.3:18633139-18633158 | None:intergenic | 60.0% |
| TAACTGCAGGGACGCTGGGG+TGG | + | chr4.3:18634611-18634630 | MS.gene023187:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 18630334 | 18634806 | 18630334 | ID=MS.gene023187 |
| chr4.3 | mRNA | 18630334 | 18634806 | 18630334 | ID=MS.gene023187.t1;Parent=MS.gene023187 |
| chr4.3 | exon | 18630334 | 18630459 | 18630334 | ID=MS.gene023187.t1.exon1;Parent=MS.gene023187.t1 |
| chr4.3 | CDS | 18630334 | 18630459 | 18630334 | ID=cds.MS.gene023187.t1;Parent=MS.gene023187.t1 |
| chr4.3 | exon | 18630722 | 18630947 | 18630722 | ID=MS.gene023187.t1.exon2;Parent=MS.gene023187.t1 |
| chr4.3 | CDS | 18630722 | 18630947 | 18630722 | ID=cds.MS.gene023187.t1;Parent=MS.gene023187.t1 |
| chr4.3 | exon | 18631669 | 18631914 | 18631669 | ID=MS.gene023187.t1.exon3;Parent=MS.gene023187.t1 |
| chr4.3 | CDS | 18631669 | 18631914 | 18631669 | ID=cds.MS.gene023187.t1;Parent=MS.gene023187.t1 |
| chr4.3 | exon | 18632031 | 18632081 | 18632031 | ID=MS.gene023187.t1.exon4;Parent=MS.gene023187.t1 |
| chr4.3 | CDS | 18632031 | 18632081 | 18632031 | ID=cds.MS.gene023187.t1;Parent=MS.gene023187.t1 |
| chr4.3 | exon | 18632209 | 18632469 | 18632209 | ID=MS.gene023187.t1.exon5;Parent=MS.gene023187.t1 |
| chr4.3 | CDS | 18632209 | 18632469 | 18632209 | ID=cds.MS.gene023187.t1;Parent=MS.gene023187.t1 |
| chr4.3 | exon | 18632883 | 18633050 | 18632883 | ID=MS.gene023187.t1.exon6;Parent=MS.gene023187.t1 |
| chr4.3 | CDS | 18632883 | 18633050 | 18632883 | ID=cds.MS.gene023187.t1;Parent=MS.gene023187.t1 |
| chr4.3 | exon | 18633428 | 18633682 | 18633428 | ID=MS.gene023187.t1.exon7;Parent=MS.gene023187.t1 |
| chr4.3 | CDS | 18633428 | 18633682 | 18633428 | ID=cds.MS.gene023187.t1;Parent=MS.gene023187.t1 |
| chr4.3 | exon | 18633773 | 18634806 | 18633773 | ID=MS.gene023187.t1.exon8;Parent=MS.gene023187.t1 |
| chr4.3 | CDS | 18633773 | 18634806 | 18633773 | ID=cds.MS.gene023187.t1;Parent=MS.gene023187.t1 |
| Gene Sequence |
| Protein sequence |
