Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001757.t1 | XP_013444890.1 | 94.5 | 1174 | 65 | 0 | 1 | 1174 | 1 | 1174 | 0.00E+00 | 1902.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001757.t1 | O65272 | 64.7 | 1088 | 343 | 7 | 61 | 1145 | 93 | 1142 | 0.0e+00 | 1188.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001757.t1 | A0A072TZG2 | 94.5 | 1174 | 65 | 0 | 1 | 1174 | 1 | 1174 | 0.0e+00 | 1902.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene024366 | MS.gene001757 | PPI |
MS.gene52206 | MS.gene001757 | PPI |
MS.gene001757 | MS.gene069261 | PPI |
MS.gene001757 | MS.gene025832 | PPI |
MS.gene001757 | MS.gene22770 | PPI |
MS.gene023837 | MS.gene001757 | PPI |
MS.gene27690 | MS.gene001757 | PPI |
MS.gene001757 | MS.gene023837 | PPI |
MS.gene001757 | MS.gene050727 | PPI |
MS.gene001757 | MS.gene019557 | PPI |
MS.gene001757 | MS.gene056723 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001757.t1 | MTR_8g031550 | 96.678 | 1174 | 39 | 0 | 1 | 1174 | 1 | 1174 | 0.0 | 2281 |
MS.gene001757.t1 | MTR_8g031550 | 96.570 | 1137 | 39 | 0 | 1 | 1137 | 1 | 1137 | 0.0 | 2203 |
MS.gene001757.t1 | MTR_7g076700 | 89.853 | 611 | 60 | 1 | 565 | 1173 | 1 | 611 | 0.0 | 1018 |
MS.gene001757.t1 | MTR_4g092790 | 37.599 | 633 | 345 | 13 | 573 | 1170 | 110 | 727 | 2.73e-98 | 331 |
MS.gene001757.t1 | MTR_4g092790 | 38.795 | 531 | 282 | 10 | 574 | 1070 | 111 | 632 | 3.58e-85 | 291 |
MS.gene001757.t1 | MTR_1g016450 | 31.302 | 361 | 231 | 6 | 595 | 948 | 189 | 539 | 1.89e-41 | 162 |
MS.gene001757.t1 | MTR_0050s0160 | 31.564 | 358 | 234 | 5 | 595 | 948 | 181 | 531 | 2.59e-39 | 155 |
MS.gene001757.t1 | MTR_8g101640 | 30.194 | 361 | 238 | 6 | 595 | 948 | 187 | 540 | 1.55e-31 | 132 |
MS.gene001757.t1 | MTR_8g101640 | 30.194 | 361 | 238 | 6 | 595 | 948 | 187 | 540 | 1.77e-31 | 132 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene001757.t1 | AT4G00630 | 70.404 | 1115 | 292 | 9 | 61 | 1173 | 93 | 1171 | 0.0 | 1417 |
MS.gene001757.t1 | AT4G00630 | 69.716 | 1126 | 292 | 10 | 61 | 1173 | 93 | 1182 | 0.0 | 1407 |
MS.gene001757.t1 | AT1G01790 | 69.991 | 1123 | 303 | 10 | 61 | 1174 | 93 | 1190 | 0.0 | 1370 |
MS.gene001757.t1 | AT1G01790 | 69.991 | 1123 | 303 | 10 | 61 | 1174 | 93 | 1190 | 0.0 | 1370 |
MS.gene001757.t1 | AT4G04850 | 37.724 | 615 | 338 | 9 | 573 | 1155 | 106 | 707 | 7.50e-109 | 359 |
MS.gene001757.t1 | AT4G04850 | 39.057 | 530 | 280 | 8 | 573 | 1070 | 106 | 624 | 5.75e-96 | 320 |
MS.gene001757.t1 | AT5G51710 | 31.818 | 396 | 221 | 7 | 579 | 948 | 154 | 526 | 4.18e-44 | 169 |
MS.gene001757.t1 | AT5G51710 | 31.818 | 396 | 221 | 7 | 579 | 948 | 154 | 526 | 6.58e-44 | 169 |
MS.gene001757.t1 | AT2G19600 | 33.053 | 357 | 230 | 5 | 595 | 948 | 191 | 541 | 1.25e-37 | 150 |
MS.gene001757.t1 | AT5G11800 | 32.584 | 356 | 229 | 5 | 595 | 946 | 199 | 547 | 1.37e-37 | 150 |
Find 271 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCGAATTCGGGGTCGATTTC+TGG | 0.152094 | 8.3:-63014917 | MS.gene001757:CDS |
CATATCATTATTTGTGGATT+TGG | 0.179581 | 8.3:-63008615 | MS.gene001757:CDS |
AATAACTTTCTTAATTCTAT+TGG | 0.199658 | 8.3:+63013178 | None:intergenic |
TCTGGGGATGCTGCTGTTAA+AGG | 0.201726 | 8.3:-63014110 | MS.gene001757:CDS |
GGAATCTTGATTGGGCCTTA+TGG | 0.210747 | 8.3:-63012529 | MS.gene001757:CDS |
CAATCGTCCACCTGCAATTA+TGG | 0.226201 | 8.3:+63010615 | None:intergenic |
CCCATGAACATTGCGAATAA+TGG | 0.245223 | 8.3:+63012501 | None:intergenic |
ACAAAAGCAATCGCTGAATT+TGG | 0.245623 | 8.3:-63012478 | MS.gene001757:CDS |
ATAACTTTCTTAATTCTATT+GGG | 0.250220 | 8.3:+63013179 | None:intergenic |
TTCTACACTTGATATTATTC+AGG | 0.254039 | 8.3:-63014681 | MS.gene001757:CDS |
GATTCTTATGCATATGATAA+TGG | 0.255232 | 8.3:-63014983 | MS.gene001757:CDS |
GAATTTGCATTTGTGGCTTT+TGG | 0.256556 | 8.3:-63009306 | MS.gene001757:CDS |
CAGTCCTGTTCTTGGTTACT+TGG | 0.257144 | 8.3:-63012557 | MS.gene001757:CDS |
TCGATTTCTGGTGCGGAATT+AGG | 0.265139 | 8.3:-63014905 | MS.gene001757:CDS |
TCAAGTAGCCGTTGAATCTT+TGG | 0.282073 | 8.3:-63014579 | MS.gene001757:CDS |
GGCAGGCCTGTCCATGGCTT+TGG | 0.282963 | 8.3:-63009817 | MS.gene001757:CDS |
TTGGCTGCTGGAATCTTGAT+TGG | 0.289155 | 8.3:-63012538 | MS.gene001757:CDS |
AATACACTCTTCGTTGTTCT+TGG | 0.290031 | 8.3:-63009993 | MS.gene001757:CDS |
ACTGTGGTTGCAATGACTTC+TGG | 0.303111 | 8.3:+63013254 | None:intergenic |
ACCCCTCCTTTGGAAGAATT+AGG | 0.314078 | 8.3:+63011019 | None:intergenic |
TTGAATGAGGAGTCGAATTC+GGG | 0.315929 | 8.3:-63014929 | MS.gene001757:CDS |
CTTCCCTCTTTGACATGCTT+TGG | 0.316384 | 8.3:-63013042 | MS.gene001757:CDS |
TTGTTGACTGCCGCAGTGAT+TGG | 0.316409 | 8.3:-63011861 | MS.gene001757:CDS |
ATATCATTATTTGTGGATTT+GGG | 0.319009 | 8.3:-63008614 | MS.gene001757:CDS |
TCAAACTTTCCAGTCATCAT+AGG | 0.319436 | 8.3:-63009444 | MS.gene001757:CDS |
CAAGCCATTGCTGAAGCTCT+TGG | 0.320715 | 8.3:-63010673 | MS.gene001757:CDS |
TCCATTATTCGCAATGTTCA+TGG | 0.325451 | 8.3:-63012502 | MS.gene001757:CDS |
CAGTTGTGTCTTCCAAGGTT+TGG | 0.326284 | 8.3:+63014012 | None:intergenic |
GCAGGCCTGTCCATGGCTTT+GGG | 0.327407 | 8.3:-63009816 | MS.gene001757:CDS |
AAACTTCATGTCGACCCTTC+AGG | 0.327869 | 8.3:+63006606 | None:intergenic |
CCATATCGTGGCCTCCTATT+AGG | 0.328992 | 8.3:-63009726 | MS.gene001757:CDS |
CGTTTAGGCAGTCCTGTTCT+TGG | 0.329578 | 8.3:-63012565 | MS.gene001757:intron |
CTTCGCCCAGCCATGGTGTA+AGG | 0.330781 | 8.3:+63009010 | None:intergenic |
CCTCCCAGAGGAGGAGAAAT+TGG | 0.333464 | 8.3:-63014144 | MS.gene001757:CDS |
CGAACGAAAGTCTTCACATT+TGG | 0.334584 | 8.3:+63007899 | None:intergenic |
GGAACAGCAAAGAGGACAAC+TGG | 0.335158 | 8.3:+63009055 | None:intergenic |
CGTGATCATATCATTATTTG+TGG | 0.340749 | 8.3:-63008621 | MS.gene001757:CDS |
TTTGAATGAGGAGTCGAATT+CGG | 0.348114 | 8.3:-63014930 | MS.gene001757:CDS |
TCTTTGCTGTTCCTTGTTGT+CGG | 0.349050 | 8.3:-63009045 | MS.gene001757:CDS |
TGGAGGAGAATTTGCATTTG+TGG | 0.349698 | 8.3:-63009313 | MS.gene001757:CDS |
ATCAAGTGGTGACGAGTCTT+TGG | 0.350895 | 8.3:-63014075 | MS.gene001757:CDS |
AGTAAATAGTATTGTGTTTG+AGG | 0.355110 | 8.3:-63014777 | MS.gene001757:CDS |
CTCGGCTCTGTTGGCATAGA+AGG | 0.355570 | 8.3:+63013301 | None:intergenic |
GTGAACCTTTGGGAGAAGTT+GGG | 0.355846 | 8.3:-63014883 | MS.gene001757:CDS |
GAACGAAAGTCTTCACATTT+GGG | 0.358232 | 8.3:+63007900 | None:intergenic |
TAGTATTGTGTTTGAGGAAA+AGG | 0.360431 | 8.3:-63014771 | MS.gene001757:CDS |
CCAGCGTCGCCGAAGTAAAC+AGG | 0.367722 | 8.3:+63008108 | None:intergenic |
AGACTTGGTTCCAAGGTCTC+TGG | 0.367740 | 8.3:+63007630 | None:intergenic |
TGCCCTGCTGCTATCGTCAT+TGG | 0.368125 | 8.3:-63011807 | MS.gene001757:CDS |
TCAATGAAGAAATATGTCTT+TGG | 0.369826 | 8.3:-63012310 | MS.gene001757:CDS |
ATTGTTGGGTTATTGTTAGT+TGG | 0.370050 | 8.3:-63013699 | MS.gene001757:CDS |
CCAGGCCAATATTAAATAAC+AGG | 0.371755 | 8.3:+63012446 | None:intergenic |
ATACACTCTTCGTTGTTCTT+GGG | 0.374043 | 8.3:-63009992 | MS.gene001757:CDS |
TTAGGGGAAATAGGGGAGTT+TGG | 0.376574 | 8.3:-63015024 | MS.gene001757:CDS |
TGAACCAATTTCTCCTCCTC+TGG | 0.377725 | 8.3:+63014140 | None:intergenic |
CCTTGTTGTCGGAATTTCAA+TGG | 0.377928 | 8.3:-63009034 | MS.gene001757:CDS |
TCTGCAATCTGCTTGTATAT+AGG | 0.380038 | 8.3:+63010044 | None:intergenic |
TCCATCACTGCCATAATTGC+AGG | 0.381757 | 8.3:-63010625 | MS.gene001757:CDS |
TATCTGAGTGATCATGATAA+TGG | 0.382966 | 8.3:-63013981 | MS.gene001757:CDS |
TCATAAAGAAGAGGCCTAAT+AGG | 0.383052 | 8.3:+63009712 | None:intergenic |
AGAAAGTGTTACCCCTCCTT+TGG | 0.384451 | 8.3:+63011009 | None:intergenic |
AAGTTTGAAAGAAGAAGTTT+TGG | 0.389427 | 8.3:+63009459 | None:intergenic |
GTGCAAACTATAGAACAGTT+TGG | 0.390232 | 8.3:-63007940 | MS.gene001757:CDS |
GTTCTTGGTTACTTGGCTGC+TGG | 0.391622 | 8.3:-63012550 | MS.gene001757:CDS |
ATGTCGACCCTTCAGGGACT+GGG | 0.393413 | 8.3:+63006613 | None:intergenic |
AATGGCCCTTACACCATGGC+TGG | 0.395258 | 8.3:-63009016 | MS.gene001757:CDS |
ATTCTTATGCATATGATAAT+GGG | 0.395947 | 8.3:-63014982 | MS.gene001757:CDS |
TGAATCGGGAGATTGCGTTT+TGG | 0.396360 | 8.3:+63006647 | None:intergenic |
AGTGGCAATTGGGCGTTCAT+TGG | 0.396369 | 8.3:-63008136 | MS.gene001757:CDS |
GGGAGTTTGGCTTAAGTGTC+AGG | 0.396760 | 8.3:-63015011 | MS.gene001757:CDS |
GGGTTATTGTTAGTTGGAGC+AGG | 0.397102 | 8.3:-63013693 | MS.gene001757:CDS |
AATTACCAAAGCTGATTGTT+GGG | 0.398583 | 8.3:-63013713 | MS.gene001757:CDS |
AAAGATCACACCTCTTGTTC+AGG | 0.401024 | 8.3:+63013146 | None:intergenic |
TGTGTCTTCCAAGGTTTGGC+TGG | 0.402506 | 8.3:+63014016 | None:intergenic |
TGCGGAATTAGGTGAACCTT+TGG | 0.404082 | 8.3:-63014894 | MS.gene001757:CDS |
GGTGAACCTTTGGGAGAAGT+TGG | 0.405179 | 8.3:-63014884 | MS.gene001757:CDS |
CCTAATAGGAGGCCACGATA+TGG | 0.406215 | 8.3:+63009726 | None:intergenic |
AACTTCATGTCGACCCTTCA+GGG | 0.407900 | 8.3:+63006607 | None:intergenic |
GTTGGGCTACTTCTTGCTCC+TGG | 0.409684 | 8.3:-63009333 | MS.gene001757:CDS |
CGATAGCAGCAGGGCAAGCT+TGG | 0.409870 | 8.3:+63011814 | None:intergenic |
CAATTACCAAAGCTGATTGT+TGG | 0.411302 | 8.3:-63013714 | MS.gene001757:CDS |
GATGGAAACTGCAGCCTTAA+CGG | 0.412543 | 8.3:+63010642 | None:intergenic |
AACATCATGTTGCTCAAAAC+GGG | 0.413917 | 8.3:+63008969 | None:intergenic |
TCTTGGTCTGGCTGCCGTTA+AGG | 0.420656 | 8.3:-63010656 | MS.gene001757:CDS |
GACTTGGTTCCAAGGTCTCT+GGG | 0.426943 | 8.3:+63007631 | None:intergenic |
CATGTCGACCCTTCAGGGAC+TGG | 0.427412 | 8.3:+63006612 | None:intergenic |
TGGCTGCTGGAATCTTGATT+GGG | 0.432019 | 8.3:-63012537 | MS.gene001757:CDS |
GCTTCGCAGCCTCAAGTTCA+AGG | 0.438137 | 8.3:+63014267 | None:intergenic |
CATTGCTGAAGCTCTTGGTC+TGG | 0.440789 | 8.3:-63010668 | MS.gene001757:CDS |
GAAACAAGTGGAAGTTCTCT+TGG | 0.441734 | 8.3:-63006699 | MS.gene001757:CDS |
TGGATTTGGGCGAGTTGGCC+AGG | 0.442684 | 8.3:-63008601 | MS.gene001757:intron |
GCCCTGCTGCTATCGTCATT+GGG | 0.442972 | 8.3:-63011806 | MS.gene001757:CDS |
TGTTGACTGCCGCAGTGATT+GGG | 0.450350 | 8.3:-63011860 | MS.gene001757:CDS |
CTCAGTGAAAGAGTGGCAAT+TGG | 0.450902 | 8.3:-63008147 | MS.gene001757:intron |
ATTGTTGCAAAAGGCGTTGA+AGG | 0.451380 | 8.3:-63014816 | MS.gene001757:CDS |
TGGGGAGTCGTCAATTGAAT+CGG | 0.453585 | 8.3:+63006632 | None:intergenic |
ATTATATCCGCCATCAGAGT+TGG | 0.453622 | 8.3:-63009351 | MS.gene001757:CDS |
TGCAAACTATAGAACAGTTT+GGG | 0.455091 | 8.3:-63007939 | MS.gene001757:CDS |
TGGCCTCCTTCGCCCAGCCA+TGG | 0.456514 | 8.3:+63009003 | None:intergenic |
CCAGTCATCATAGGGACATT+GGG | 0.458443 | 8.3:-63009435 | MS.gene001757:CDS |
AACACGTACTTCTGTAAGTT+CGG | 0.459648 | 8.3:+63006974 | None:intergenic |
ATTGAAAGAATTGTTGCAAA+AGG | 0.460740 | 8.3:-63014825 | MS.gene001757:CDS |
TGAATTCAGATCCCGCCATC+TGG | 0.460895 | 8.3:-63006997 | MS.gene001757:CDS |
AGAAGTAGAGGTACAAAGTG+TGG | 0.461568 | 8.3:-63014852 | MS.gene001757:CDS |
AGTGGAAGTTCTCTTGGTTA+CGG | 0.464990 | 8.3:-63006693 | MS.gene001757:CDS |
CAGTCAAAACTAGCTTTCAA+TGG | 0.465476 | 8.3:-63015166 | MS.gene001757:CDS |
ATAAGGTCCTACATAAAGTC+GGG | 0.466975 | 8.3:-63008006 | MS.gene001757:intron |
TACATAAAGTCGGGGCTGGA+AGG | 0.468221 | 8.3:-63007997 | MS.gene001757:CDS |
GCGGAATTAGGTGAACCTTT+GGG | 0.472698 | 8.3:-63014893 | MS.gene001757:CDS |
CAAACTTTCCAGTCATCATA+GGG | 0.474876 | 8.3:-63009443 | MS.gene001757:CDS |
ATCAACTGCTGTTGTTCTGC+AGG | 0.475889 | 8.3:-63011766 | MS.gene001757:intron |
AGTGATGGTGGTAAAGATGT+AGG | 0.476621 | 8.3:-63014512 | MS.gene001757:CDS |
GAAGAATTAGGTGAAATAAG+AGG | 0.477526 | 8.3:+63011031 | None:intergenic |
CCTGTTATTTAATATTGGCC+TGG | 0.477654 | 8.3:-63012446 | MS.gene001757:CDS |
TAAAGAACGTGTGGTTGCTC+AGG | 0.478283 | 8.3:-63014480 | MS.gene001757:CDS |
AACTAGAGGCCTTGCACTTG+AGG | 0.478726 | 8.3:+63013220 | None:intergenic |
AAGAAATATGTCTTTGGAGT+AGG | 0.480048 | 8.3:-63012304 | MS.gene001757:CDS |
CCTGTTTACTTCGGCGACGC+TGG | 0.482365 | 8.3:-63008108 | MS.gene001757:CDS |
ACACTCTTGGTTGCTTTGAT+CGG | 0.482647 | 8.3:-63009393 | MS.gene001757:CDS |
CGCGCTCATGATGTTACTCA+TGG | 0.482877 | 8.3:-63007878 | MS.gene001757:CDS |
AATAACCCAACAATCAGCTT+TGG | 0.483682 | 8.3:+63013708 | None:intergenic |
CTTCTGTAAGTTCGGCCAGA+TGG | 0.483713 | 8.3:+63006982 | None:intergenic |
AGAACTCCTCTCGGCTCTGT+TGG | 0.485509 | 8.3:+63013292 | None:intergenic |
CCCAATGTCCCTATGATGAC+TGG | 0.486332 | 8.3:+63009435 | None:intergenic |
GAACCAATTTCTCCTCCTCT+GGG | 0.487152 | 8.3:+63014141 | None:intergenic |
GCAGGTTGTCCCAGAGACCT+TGG | 0.487605 | 8.3:-63007640 | MS.gene001757:intron |
CACCTAATTCTTCCAAAGGA+GGG | 0.488132 | 8.3:-63011021 | MS.gene001757:CDS |
CGAATAATGGAGAGTCCATA+AGG | 0.491502 | 8.3:+63012514 | None:intergenic |
TCCAGTCATCATAGGGACAT+TGG | 0.492149 | 8.3:-63009436 | MS.gene001757:CDS |
GGACTTCTTTAATGATGACT+TGG | 0.493812 | 8.3:+63013836 | None:intergenic |
GGTTATTGTTAGTTGGAGCA+GGG | 0.495984 | 8.3:-63013692 | MS.gene001757:intron |
TGAACCTTTGGGAGAAGTTG+GGG | 0.496175 | 8.3:-63014882 | MS.gene001757:CDS |
CAATAAAACCAGCCAAACCT+TGG | 0.498510 | 8.3:-63014024 | MS.gene001757:CDS |
CGCACATCTAGTGCGACAAA+AGG | 0.499834 | 8.3:+63008465 | None:intergenic |
TTGGTGGCTCATTATGTTTG+TGG | 0.500622 | 8.3:-63011837 | MS.gene001757:CDS |
GTCCTACATAAAGTCGGGGC+TGG | 0.501774 | 8.3:-63008001 | MS.gene001757:CDS |
TGCCGCAGTGATTGGGTTGG+TGG | 0.502423 | 8.3:-63011853 | MS.gene001757:CDS |
TTCCCAATGACGATAGCAGC+AGG | 0.503569 | 8.3:+63011804 | None:intergenic |
GGACCAGCCTTCTCACAGCC+AGG | 0.504227 | 8.3:-63009971 | MS.gene001757:CDS |
TGTAAGTTCGGCCAGATGGC+GGG | 0.505604 | 8.3:+63006986 | None:intergenic |
ACCTGCAATTATGGCAGTGA+TGG | 0.505797 | 8.3:+63010624 | None:intergenic |
ACCTAATTCTTCCAAAGGAG+GGG | 0.507007 | 8.3:-63011020 | MS.gene001757:intron |
TTGGATCTTCCTGTTTACTT+CGG | 0.508432 | 8.3:-63008117 | MS.gene001757:CDS |
GCAGCCAAGTAACCAAGAAC+AGG | 0.514734 | 8.3:+63012553 | None:intergenic |
TTTCCTAGCTCTCCGTGGAA+AGG | 0.514915 | 8.3:-63012339 | MS.gene001757:intron |
GAACATCATGTTGCTCAAAA+CGG | 0.515385 | 8.3:+63008968 | None:intergenic |
CCATTATTCGCAATGTTCAT+GGG | 0.515752 | 8.3:-63012501 | MS.gene001757:CDS |
GCTGCTATCGTCATTGGGAA+TGG | 0.516077 | 8.3:-63011801 | MS.gene001757:CDS |
TTATATCCGCCATCAGAGTT+GGG | 0.516934 | 8.3:-63009350 | MS.gene001757:CDS |
TACAACTTCCAAAGATTCAA+CGG | 0.518209 | 8.3:+63014571 | None:intergenic |
AGATTCAGTTGTGTCTTCCA+AGG | 0.521068 | 8.3:+63014007 | None:intergenic |
ATTTGTGGATTTGGGCGAGT+TGG | 0.521361 | 8.3:-63008606 | MS.gene001757:CDS |
ATTAGGCCTCTTCTTTATGA+CGG | 0.521547 | 8.3:-63009709 | MS.gene001757:intron |
AAGAACAACGAAGAGTGTAT+TGG | 0.522092 | 8.3:+63009995 | None:intergenic |
AGGAATGTTGATAATTCGAA+AGG | 0.525397 | 8.3:-63014953 | MS.gene001757:CDS |
TACCCTGGCTGTGAGAAGGC+TGG | 0.525501 | 8.3:+63009968 | None:intergenic |
TGAAGTTGAATTTGTTGTGT+AGG | 0.526097 | 8.3:-63015060 | MS.gene001757:CDS |
GTTGCCGCAATCTCCGATGC+AGG | 0.528022 | 8.3:+63007026 | None:intergenic |
TAACTTTCTTAATTCTATTG+GGG | 0.530540 | 8.3:+63013180 | None:intergenic |
GGGGAGTCGTCAATTGAATC+GGG | 0.531569 | 8.3:+63006633 | None:intergenic |
TCAGTGAAAGAGTGGCAATT+GGG | 0.532279 | 8.3:-63008146 | MS.gene001757:intron |
GCTGCGGCTAGTTGAAGACT+TGG | 0.532868 | 8.3:+63007615 | None:intergenic |
TTCAAGGGCAACAGCTTGCT+CGG | 0.537374 | 8.3:+63014283 | None:intergenic |
TCAGGTTAAACTTCCTGCAT+CGG | 0.538461 | 8.3:-63007039 | MS.gene001757:intron |
AGCTGTTGCCCTTGAACTTG+AGG | 0.538767 | 8.3:-63014276 | MS.gene001757:CDS |
CATAATTGCAGGTGGACGAT+TGG | 0.539123 | 8.3:-63010614 | MS.gene001757:intron |
ACAAATGCAAATTCTCCTCC+AGG | 0.540322 | 8.3:+63009315 | None:intergenic |
AATCTCACCTCACTTTCTAC+AGG | 0.541395 | 8.3:+63008934 | None:intergenic |
TTCGCCCAGCCATGGTGTAA+GGG | 0.542630 | 8.3:+63009011 | None:intergenic |
ATGCTCCCAAAGCCATGGAC+AGG | 0.542672 | 8.3:+63009811 | None:intergenic |
TATCGTCATTGGGAATGGCC+TGG | 0.547993 | 8.3:-63011796 | MS.gene001757:CDS |
TCACCTAATTCTTCCAAAGG+AGG | 0.551702 | 8.3:-63011022 | MS.gene001757:CDS |
TTCTACTGGTAGAGTATCTG+TGG | 0.552448 | 8.3:+63014178 | None:intergenic |
ACACCATGGCTGGGCGAAGG+AGG | 0.553208 | 8.3:-63009006 | MS.gene001757:CDS |
GATATGTGGCAAGACACTCT+TGG | 0.553449 | 8.3:-63009406 | MS.gene001757:CDS |
GACAATTATAGTTCCGCACA+AGG | 0.553709 | 8.3:-63014545 | MS.gene001757:CDS |
GCAATAACTCTAGATTCTCC+TGG | 0.554297 | 8.3:-63007962 | MS.gene001757:CDS |
GACTGCTGTGAAAGCGGAGG+AGG | 0.555427 | 8.3:-63014330 | MS.gene001757:CDS |
CAAAACGGGAAGCAATCAGC+TGG | 0.555442 | 8.3:+63008983 | None:intergenic |
CTTTGGAGTAGGCTCTGCTC+AGG | 0.555662 | 8.3:-63012293 | MS.gene001757:intron |
GTTATTTAATATTGGCCTGG+AGG | 0.557808 | 8.3:-63012443 | MS.gene001757:intron |
AGGGCCACAACATCTTCTAC+TGG | 0.558465 | 8.3:+63014164 | None:intergenic |
GACTTCTTTAATGATGACTT+GGG | 0.558964 | 8.3:+63013837 | None:intergenic |
TGAGGAAACTTCTTCAACTG+TGG | 0.559577 | 8.3:+63013238 | None:intergenic |
CTTACACCATGGCTGGGCGA+AGG | 0.559694 | 8.3:-63009009 | MS.gene001757:CDS |
ACTCTCGTTGGAACCTTGTG+CGG | 0.560540 | 8.3:+63014532 | None:intergenic |
CTCTTTCTTTAGCTGAGGCG+AGG | 0.560629 | 8.3:-63014604 | MS.gene001757:CDS |
TATGCATATGATAATGGGAA+TGG | 0.560647 | 8.3:-63014977 | MS.gene001757:CDS |
GGTTGCTCAGGAAGATATCA+AGG | 0.563559 | 8.3:-63014468 | MS.gene001757:CDS |
CATATGATAATGGGAATGGT+AGG | 0.563797 | 8.3:-63014973 | MS.gene001757:CDS |
GTGATGGTGGTAAAGATGTA+GGG | 0.563894 | 8.3:-63014511 | MS.gene001757:CDS |
ATTTCACCTAATTCTTCCAA+AGG | 0.564809 | 8.3:-63011025 | MS.gene001757:CDS |
AAGAAGTAGCCCAACTCTGA+TGG | 0.565571 | 8.3:+63009341 | None:intergenic |
AAGATGAAGCATCAAGAGCT+TGG | 0.565574 | 8.3:-63014715 | MS.gene001757:CDS |
CTGTAAGTTCGGCCAGATGG+CGG | 0.566011 | 8.3:+63006985 | None:intergenic |
CATTGAACTAAGCCTTTCCA+CGG | 0.568045 | 8.3:+63012327 | None:intergenic |
GAAACAGGCAGGCCTGTCCA+TGG | 0.568675 | 8.3:-63009823 | MS.gene001757:intron |
TTCGGGGTCGATTTCTGGTG+CGG | 0.570404 | 8.3:-63014912 | MS.gene001757:CDS |
ACTTCCTGCATCGGAGATTG+CGG | 0.573941 | 8.3:-63007030 | MS.gene001757:CDS |
GGAGTTTGGCTTAAGTGTCA+GGG | 0.574305 | 8.3:-63015010 | MS.gene001757:CDS |
GCGATTGCAAAGTAGAAAAG+AGG | 0.575556 | 8.3:-63014405 | MS.gene001757:CDS |
TAGTTGAAGACTTGGTTCCA+AGG | 0.576304 | 8.3:+63007623 | None:intergenic |
CCAATTTCTCCTCCTCTGGG+AGG | 0.576904 | 8.3:+63014144 | None:intergenic |
TAATTCGAAAGGTTTGAATG+AGG | 0.578036 | 8.3:-63014942 | MS.gene001757:CDS |
TAATGTTCTCAGTGAAAGAG+TGG | 0.578958 | 8.3:-63008154 | MS.gene001757:intron |
GATAAGGTCCTACATAAAGT+CGG | 0.580237 | 8.3:-63008007 | MS.gene001757:intron |
AATGATGACTTGGGAGCAGA+TGG | 0.581879 | 8.3:+63013846 | None:intergenic |
CAATTTCTCCTCCTCTGGGA+GGG | 0.584135 | 8.3:+63014145 | None:intergenic |
GACGACTCCCCAGTCCCTGA+AGG | 0.584852 | 8.3:-63006621 | MS.gene001757:CDS |
AATGGCTCTTTCTTTAGCTG+AGG | 0.584884 | 8.3:-63014609 | MS.gene001757:CDS |
AAGAAGTTTCCTCAAGTGCA+AGG | 0.585180 | 8.3:-63013229 | MS.gene001757:CDS |
TGCGTCGATACCTGAACAAG+AGG | 0.586003 | 8.3:-63013156 | MS.gene001757:intron |
GACAAATTTAGCGTGTTGTG+AGG | 0.586077 | 8.3:-63014438 | MS.gene001757:CDS |
TTCCAGCCCCGACTTTATGT+AGG | 0.586604 | 8.3:+63007999 | None:intergenic |
ATCAAACTCATCTGTACTAG+AGG | 0.586794 | 8.3:+63013785 | None:intergenic |
GAACAGCAAAGAGGACAACT+GGG | 0.587076 | 8.3:+63009056 | None:intergenic |
GGGCTACTTCTTGCTCCTGG+AGG | 0.587598 | 8.3:-63009330 | MS.gene001757:CDS |
TTTACCACCATCACTCTCGT+TGG | 0.587719 | 8.3:+63014520 | None:intergenic |
CACCTACCCTGGCTGTGAGA+AGG | 0.588217 | 8.3:+63009964 | None:intergenic |
CAGCAGTTGATGATAATGCC+AGG | 0.590625 | 8.3:+63011778 | None:intergenic |
ATTCAGCTATCTGAAACAAG+TGG | 0.592629 | 8.3:-63006711 | MS.gene001757:intron |
GACTGCCGCAGTGATTGGGT+TGG | 0.597814 | 8.3:-63011856 | MS.gene001757:CDS |
CACCCACCGTCATAAAGAAG+AGG | 0.598817 | 8.3:+63009703 | None:intergenic |
CCATTGAAATTCCGACAACA+AGG | 0.599510 | 8.3:+63009034 | None:intergenic |
TTGTCGCACTAGATGTGCGA+AGG | 0.599606 | 8.3:-63008461 | MS.gene001757:intron |
CTTATTACCTGTAGAAAGTG+AGG | 0.599858 | 8.3:-63008941 | MS.gene001757:intron |
ACATAAAGTCGGGGCTGGAA+GGG | 0.600994 | 8.3:-63007996 | MS.gene001757:CDS |
ATGGCCCTTACACCATGGCT+GGG | 0.601025 | 8.3:-63009015 | MS.gene001757:CDS |
TAGCCAAAGCATGTCAAAGA+GGG | 0.602270 | 8.3:+63013039 | None:intergenic |
TCTTGAAGTTGTCTAACTAG+AGG | 0.603960 | 8.3:+63013206 | None:intergenic |
ACATTGGGACTCTTGATATG+TGG | 0.605276 | 8.3:-63009420 | MS.gene001757:CDS |
TTACAGGTGTTACAGGAGAG+AGG | 0.605412 | 8.3:-63011443 | MS.gene001757:intron |
AGCTGTTCAAAATGCAACAA+TGG | 0.605598 | 8.3:-63014627 | MS.gene001757:CDS |
TCAGTTGACTGCTGTGAAAG+CGG | 0.606500 | 8.3:-63014336 | MS.gene001757:CDS |
TGGTAAAGATGTAGGGCAAG+AGG | 0.609768 | 8.3:-63014504 | MS.gene001757:CDS |
TCTGATATTGCTCCATATCG+TGG | 0.610625 | 8.3:-63009738 | MS.gene001757:CDS |
TGTCGACCCTTCAGGGACTG+GGG | 0.612346 | 8.3:+63006614 | None:intergenic |
CTTCGCAGCCTCAAGTTCAA+GGG | 0.614886 | 8.3:+63014268 | None:intergenic |
TGTTGTGGCCCTCCCAGAGG+AGG | 0.615145 | 8.3:-63014153 | MS.gene001757:CDS |
ACGACTCCCCAGTCCCTGAA+GGG | 0.616220 | 8.3:-63006620 | MS.gene001757:CDS |
CAAGGTTCCAACGAGAGTGA+TGG | 0.618500 | 8.3:-63014527 | MS.gene001757:CDS |
TAAAGAAGAGGCCTAATAGG+AGG | 0.624786 | 8.3:+63009715 | None:intergenic |
CAGACCAAGAGCTTCAGCAA+TGG | 0.626899 | 8.3:+63010669 | None:intergenic |
ATCACTGCCATAATTGCAGG+TGG | 0.630885 | 8.3:-63010622 | MS.gene001757:CDS |
TCTACCAGTAGAAGATGTTG+TGG | 0.637314 | 8.3:-63014168 | MS.gene001757:CDS |
GTTGACTGCTGTGAAAGCGG+AGG | 0.638546 | 8.3:-63014333 | MS.gene001757:CDS |
GACCAGCCTTCTCACAGCCA+GGG | 0.638636 | 8.3:-63009970 | MS.gene001757:intron |
GGTGAGAGCACATCACGACA+TGG | 0.640051 | 8.3:-63011422 | MS.gene001757:CDS |
TTTCAATGGCCCTTACACCA+TGG | 0.641437 | 8.3:-63009020 | MS.gene001757:CDS |
GAACCTTTGGGAGAAGTTGG+GGG | 0.641605 | 8.3:-63014881 | MS.gene001757:CDS |
AGCCGCAGCAGTGCTTTCTG+AGG | 0.642255 | 8.3:-63007601 | MS.gene001757:intron |
ACTGTTCTATAGTTTGCACC+AGG | 0.642807 | 8.3:+63007944 | None:intergenic |
TACCTCAGAAAGCACTGCTG+CGG | 0.647283 | 8.3:+63007599 | None:intergenic |
TCTGCTTGTATATAGGTCGA+AGG | 0.648132 | 8.3:+63010051 | None:intergenic |
GGTTCCAACGAGAGTGATGG+TGG | 0.651951 | 8.3:-63014524 | MS.gene001757:CDS |
AAGCAGCTGAGAACTCCTCT+CGG | 0.655699 | 8.3:+63013283 | None:intergenic |
CTGCGTCTCTAGTGATTCTG+CGG | 0.656928 | 8.3:+63014049 | None:intergenic |
GACAACAAGGAACAGCAAAG+AGG | 0.657121 | 8.3:+63009047 | None:intergenic |
ATAGCCAAAGCATGTCAAAG+AGG | 0.659536 | 8.3:+63013038 | None:intergenic |
TCCCAATGACGATAGCAGCA+GGG | 0.659628 | 8.3:+63011805 | None:intergenic |
GCAAGAGGATAAAGAACGTG+TGG | 0.665712 | 8.3:-63014489 | MS.gene001757:CDS |
GGAGATCTCGAGTCATCAAG+TGG | 0.666610 | 8.3:-63014089 | MS.gene001757:CDS |
AAGTAGCCCAACTCTGATGG+CGG | 0.671712 | 8.3:+63009344 | None:intergenic |
CGGCGACGCTGGTAGTCGAG+AGG | 0.681047 | 8.3:-63008097 | MS.gene001757:intron |
AGATGTTGTGGCCCTCCCAG+AGG | 0.686510 | 8.3:-63014156 | MS.gene001757:CDS |
TAAGGTCCTACATAAAGTCG+GGG | 0.705416 | 8.3:-63008005 | MS.gene001757:intron |
TGAATGAGGAGTCGAATTCG+GGG | 0.710618 | 8.3:-63014928 | MS.gene001757:CDS |
CGTGTTGTGAGGCTGAGTTG+AGG | 0.717249 | 8.3:-63014427 | MS.gene001757:CDS |
TTTATTGTAGGTGAGCGACG+AGG | 0.759763 | 8.3:-63013068 | MS.gene001757:intron |
AGCCACCAACCCAATCACTG+CGG | 0.780590 | 8.3:+63011851 | None:intergenic |
TCTATGCCAACAGAGCCGAG+AGG | 0.780875 | 8.3:-63013298 | MS.gene001757:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 63006611 | 63015212 | 63006611 | ID=MS.gene001757 |
chr8.3 | mRNA | 63006611 | 63015212 | 63006611 | ID=MS.gene001757.t1;Parent=MS.gene001757 |
chr8.3 | exon | 63013693 | 63015212 | 63013693 | ID=MS.gene001757.t1.exon1;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63013693 | 63015212 | 63013693 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63013157 | 63013328 | 63013157 | ID=MS.gene001757.t1.exon2;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63013157 | 63013328 | 63013157 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63012990 | 63013080 | 63012990 | ID=MS.gene001757.t1.exon3;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63012990 | 63013080 | 63012990 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63012444 | 63012580 | 63012444 | ID=MS.gene001757.t1.exon4;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63012444 | 63012580 | 63012444 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63012294 | 63012353 | 63012294 | ID=MS.gene001757.t1.exon5;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63012294 | 63012353 | 63012294 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63011767 | 63011886 | 63011767 | ID=MS.gene001757.t1.exon6;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63011767 | 63011886 | 63011767 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63011391 | 63011459 | 63011391 | ID=MS.gene001757.t1.exon7;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63011391 | 63011459 | 63011391 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63011021 | 63011086 | 63011021 | ID=MS.gene001757.t1.exon8;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63011021 | 63011086 | 63011021 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63010615 | 63010704 | 63010615 | ID=MS.gene001757.t1.exon9;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63010615 | 63010704 | 63010615 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63009971 | 63010075 | 63009971 | ID=MS.gene001757.t1.exon10;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63009971 | 63010075 | 63009971 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63009710 | 63009838 | 63009710 | ID=MS.gene001757.t1.exon11;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63009710 | 63009838 | 63009710 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63009290 | 63009499 | 63009290 | ID=MS.gene001757.t1.exon12;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63009290 | 63009499 | 63009290 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63008942 | 63009091 | 63008942 | ID=MS.gene001757.t1.exon13;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63008942 | 63009091 | 63008942 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63008602 | 63008655 | 63008602 | ID=MS.gene001757.t1.exon14;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63008602 | 63008655 | 63008602 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63008462 | 63008520 | 63008462 | ID=MS.gene001757.t1.exon15;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63008462 | 63008520 | 63008462 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63008098 | 63008164 | 63008098 | ID=MS.gene001757.t1.exon16;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63008098 | 63008164 | 63008098 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63007847 | 63008023 | 63007847 | ID=MS.gene001757.t1.exon17;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63007847 | 63008023 | 63007847 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63007602 | 63007658 | 63007602 | ID=MS.gene001757.t1.exon18;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63007602 | 63007658 | 63007602 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63006983 | 63007057 | 63006983 | ID=MS.gene001757.t1.exon19;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63006983 | 63007057 | 63006983 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
chr8.3 | exon | 63006611 | 63006727 | 63006611 | ID=MS.gene001757.t1.exon20;Parent=MS.gene001757.t1 |
chr8.3 | CDS | 63006611 | 63006727 | 63006611 | ID=cds.MS.gene001757.t1;Parent=MS.gene001757.t1 |
Gene Sequence |
Protein sequence |