Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023837.t1 | XP_003623890.3 | 94.1 | 1199 | 65 | 3 | 1 | 1199 | 1 | 1193 | 0.00E+00 | 1828.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023837.t1 | O65272 | 63.1 | 1205 | 406 | 15 | 3 | 1199 | 1 | 1174 | 0.0e+00 | 1170.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023837.t1 | A0A396H596 | 94.1 | 1199 | 65 | 3 | 1 | 1199 | 1 | 1193 | 0.0e+00 | 1828.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023837 | MS.gene050727 | PPI |
| MS.gene023837 | MS.gene019557 | PPI |
| MS.gene27690 | MS.gene023837 | PPI |
| MS.gene023837 | MS.gene001757 | PPI |
| MS.gene023837 | MS.gene056723 | PPI |
| MS.gene001757 | MS.gene023837 | PPI |
| MS.gene023837 | MS.gene025832 | PPI |
| MS.gene023837 | MS.gene22770 | PPI |
| MS.gene024366 | MS.gene023837 | PPI |
| MS.gene52206 | MS.gene023837 | PPI |
| MS.gene023837 | MS.gene069261 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023837.t1 | MTR_8g031550 | 71.593 | 1218 | 277 | 11 | 3 | 1196 | 1 | 1173 | 0.0 | 1602 |
| MS.gene023837.t1 | MTR_8g031550 | 71.780 | 1180 | 266 | 10 | 3 | 1158 | 1 | 1137 | 0.0 | 1549 |
| MS.gene023837.t1 | MTR_7g076700 | 99.837 | 614 | 1 | 0 | 586 | 1199 | 1 | 614 | 0.0 | 1224 |
| MS.gene023837.t1 | MTR_4g092790 | 36.943 | 628 | 347 | 12 | 594 | 1186 | 110 | 723 | 5.41e-91 | 311 |
| MS.gene023837.t1 | MTR_4g092790 | 38.418 | 531 | 284 | 10 | 595 | 1091 | 111 | 632 | 8.27e-79 | 273 |
| MS.gene023837.t1 | MTR_1g016450 | 29.917 | 361 | 236 | 6 | 616 | 969 | 189 | 539 | 1.62e-37 | 150 |
| MS.gene023837.t1 | MTR_0050s0160 | 30.748 | 361 | 233 | 5 | 616 | 969 | 181 | 531 | 1.10e-36 | 147 |
| MS.gene023837.t1 | MTR_8g101640 | 28.532 | 361 | 244 | 6 | 616 | 969 | 187 | 540 | 3.53e-29 | 124 |
| MS.gene023837.t1 | MTR_8g101640 | 28.532 | 361 | 244 | 6 | 616 | 969 | 187 | 540 | 4.08e-29 | 124 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023837.t1 | AT4G00630 | 66.364 | 1213 | 353 | 19 | 3 | 1199 | 1 | 1174 | 0.0 | 1409 |
| MS.gene023837.t1 | AT4G00630 | 65.768 | 1224 | 353 | 20 | 3 | 1199 | 1 | 1185 | 0.0 | 1402 |
| MS.gene023837.t1 | AT1G01790 | 65.126 | 1233 | 353 | 17 | 3 | 1199 | 1 | 1192 | 0.0 | 1347 |
| MS.gene023837.t1 | AT1G01790 | 65.126 | 1233 | 353 | 17 | 3 | 1199 | 1 | 1192 | 0.0 | 1347 |
| MS.gene023837.t1 | AT4G04850 | 38.160 | 587 | 320 | 10 | 594 | 1148 | 106 | 681 | 4.51e-102 | 342 |
| MS.gene023837.t1 | AT4G04850 | 38.679 | 530 | 282 | 10 | 594 | 1091 | 106 | 624 | 6.64e-90 | 304 |
| MS.gene023837.t1 | AT5G51710 | 30.303 | 429 | 245 | 9 | 600 | 1000 | 154 | 556 | 3.45e-41 | 161 |
| MS.gene023837.t1 | AT5G51710 | 29.953 | 424 | 245 | 8 | 600 | 997 | 154 | 551 | 3.87e-41 | 160 |
| MS.gene023837.t1 | AT5G11800 | 31.653 | 357 | 231 | 7 | 616 | 967 | 199 | 547 | 1.13e-35 | 145 |
| MS.gene023837.t1 | AT2G19600 | 31.653 | 357 | 235 | 5 | 616 | 969 | 191 | 541 | 9.76e-35 | 142 |
Find 253 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTCTTTAGCTTATGTTAA+TGG | 0.145097 | 7.1:+26493435 | MS.gene023837:CDS |
| ACACTTCAACCAAATCTTTC+TGG | 0.160957 | 7.1:-26493403 | None:intergenic |
| CATATCATTATTTGTGGATT+TGG | 0.195132 | 7.1:+26506783 | MS.gene023837:CDS |
| GGGAAGGCTGAGAGGGAAAT+AGG | 0.207473 | 7.1:+26493558 | MS.gene023837:CDS |
| TTGGCAACTGCTGGAGTTAT+TGG | 0.211575 | 7.1:+26497183 | MS.gene023837:CDS |
| GTGTTGGTTCTTCCAAAATT+TGG | 0.213838 | 7.1:-26494409 | None:intergenic |
| AAAGAGCCATTGAAGCATTT+TGG | 0.215467 | 7.1:-26493809 | None:intergenic |
| CGTTGATCATGGAGTGAATT+TGG | 0.221189 | 7.1:+26507725 | MS.gene023837:CDS |
| GAGAAATATGAATATGGATA+TGG | 0.222012 | 7.1:+26493101 | None:intergenic |
| CAATCGTCCACCTGCAATTA+TGG | 0.226201 | 7.1:-26501218 | None:intergenic |
| TCCATATCGTGGCCTTCTTT+TGG | 0.230442 | 7.1:+26504430 | MS.gene023837:CDS |
| GAATTTGCATTTGTGGCTTT+TGG | 0.235207 | 7.1:+26506069 | MS.gene023837:CDS |
| GGTATCTTGATTGGGCCTTA+TGG | 0.254328 | 7.1:+26496798 | MS.gene023837:CDS |
| TCTTTGATGGGTAGAATCTT+TGG | 0.258451 | 7.1:+26505994 | MS.gene023837:CDS |
| CCAGGCCAATATTAAATAAA+AGG | 0.258799 | 7.1:-26496881 | None:intergenic |
| CAGTTTCCCAAGCTAGTTCT+TGG | 0.259613 | 7.1:+26494647 | MS.gene023837:CDS |
| ACAAAAGCAATAGCTGAATT+TGG | 0.267120 | 7.1:+26496849 | MS.gene023837:CDS |
| TTGGCTGCTGGTATCTTGAT+TGG | 0.275019 | 7.1:+26496789 | MS.gene023837:CDS |
| CGAACAAATGTCTTCACATT+TGG | 0.276902 | 7.1:-26507693 | None:intergenic |
| AATACACTTCTTGTTATTCT+TGG | 0.278059 | 7.1:+26503618 | MS.gene023837:CDS |
| TAAGAATGAGAAACTTCTTA+TGG | 0.295559 | 7.1:+26493377 | MS.gene023837:CDS |
| CTTTGATGGGTAGAATCTTT+GGG | 0.303471 | 7.1:+26505995 | MS.gene023837:CDS |
| AGTGGAAGTTCTCTTGGTTA+TGG | 0.312057 | 7.1:+26508980 | MS.gene023837:CDS |
| TCTGCGACTTGCTTGTATAT+TGG | 0.312717 | 7.1:-26503567 | None:intergenic |
| ACCCCTCCTTTGGAAGAATT+AGG | 0.314345 | 7.1:-26500933 | None:intergenic |
| GTGGACTCAGCCTCCTCTTC+AGG | 0.317442 | 7.1:-26494581 | None:intergenic |
| TAGTCCTGTTCTTGGCTACT+TGG | 0.324259 | 7.1:+26496770 | MS.gene023837:CDS |
| GACTTTAGAAGGAGAGGTTT+TGG | 0.325536 | 7.1:+26493210 | MS.gene023837:CDS |
| TTAGCTTATGTTAATGGAAA+TGG | 0.327051 | 7.1:+26493441 | MS.gene023837:CDS |
| TGACTTCTTCAATAATGCTT+TGG | 0.328070 | 7.1:-26494525 | None:intergenic |
| GACTTCTTCAATAATGCTTT+GGG | 0.328255 | 7.1:-26494524 | None:intergenic |
| TTCTTTGTTGTTTCTTGTTG+TGG | 0.328641 | 7.1:+26506449 | MS.gene023837:CDS |
| CGCTACCTCAAGCTCTTTCA+AGG | 0.329836 | 7.1:-26493628 | None:intergenic |
| TCTTTGTTGTTTCTTGTTGT+GGG | 0.338528 | 7.1:+26506450 | MS.gene023837:CDS |
| CTTTCTCCAGGCTAAACTTC+CGG | 0.340005 | 7.1:+26508526 | MS.gene023837:intron |
| ATACACTTCTTGTTATTCTT+GGG | 0.342397 | 7.1:+26503619 | MS.gene023837:CDS |
| CAAGCCATTGCTGAAGCTCT+TGG | 0.342551 | 7.1:+26501160 | MS.gene023837:CDS |
| TTATGGGATCCAGAAAGATT+TGG | 0.351056 | 7.1:+26493394 | MS.gene023837:CDS |
| CAAGATCATATCATTATTTG+TGG | 0.351617 | 7.1:+26506777 | MS.gene023837:CDS |
| TGTTTAGGTAGTCCTGTTCT+TGG | 0.351821 | 7.1:+26496762 | MS.gene023837:intron |
| TTAGTTGTGTTTATGCTTGT+TGG | 0.353091 | 7.1:+26493289 | MS.gene023837:CDS |
| GAGGCGCTTGCAAAATAAAA+AGG | 0.354322 | 7.1:+26494013 | MS.gene023837:CDS |
| AGACTTGGCTCCAAGGTCTC+TGG | 0.356989 | 7.1:-26507943 | None:intergenic |
| TGGTGGAGAATTTGCATTTG+TGG | 0.363924 | 7.1:+26506062 | MS.gene023837:CDS |
| TCTTGGACTGGCTGCTGTTA+AGG | 0.365086 | 7.1:+26501177 | MS.gene023837:CDS |
| GAGCAAATTATAGAACAGTT+TGG | 0.365094 | 7.1:+26507652 | MS.gene023837:CDS |
| TAGTACTATGTTTGAAGAAA+AGG | 0.366180 | 7.1:+26493659 | MS.gene023837:CDS |
| GGATTATTGTTGATGGGAGC+AGG | 0.367097 | 7.1:+26494668 | MS.gene023837:CDS |
| GAAGGTTCGGGTGAGGATGC+AGG | 0.369054 | 7.1:+26493483 | MS.gene023837:CDS |
| GCCATTACTGCCATAATTGC+AGG | 0.370794 | 7.1:+26501208 | MS.gene023837:CDS |
| GAACAAATGTCTTCACATTT+GGG | 0.371309 | 7.1:-26507692 | None:intergenic |
| CATTATATCTGTGGCCTACC+TGG | 0.371383 | 7.1:+26497216 | MS.gene023837:CDS |
| TTGTTGGAATGATTCGAAAA+TGG | 0.371933 | 7.1:+26493305 | MS.gene023837:CDS |
| AATAATGCTTTGGGAGCTAA+TGG | 0.373217 | 7.1:-26494515 | None:intergenic |
| GTGTTGAATTGGATGTTGTA+GGG | 0.378275 | 7.1:+26493523 | MS.gene023837:CDS |
| GGCCCTGCTGCTATAGTTAT+CGG | 0.380713 | 7.1:+26497237 | MS.gene023837:CDS |
| TGATGAAGCAGCCCGGTCTT+TGG | 0.385431 | 7.1:+26493716 | MS.gene023837:CDS |
| AAAGATTTGGTTGAAGTGTC+AGG | 0.389359 | 7.1:+26493407 | MS.gene023837:CDS |
| GCAGGGGTGGTACCTGTAGC+TGG | 0.390134 | 7.1:+26493501 | MS.gene023837:CDS |
| ACCTGTAGCTGGTGTTGAAT+TGG | 0.394638 | 7.1:+26493512 | MS.gene023837:CDS |
| GCCAATGTCCCCGTGACGAC+TGG | 0.395745 | 7.1:-26505940 | None:intergenic |
| CCTCTTCTTTACAGCTCCTT+CGG | 0.396505 | 7.1:+26503544 | MS.gene023837:intron |
| TGGCTGCTGGTATCTTGATT+GGG | 0.396536 | 7.1:+26496790 | MS.gene023837:CDS |
| AGCAAATTATAGAACAGTTT+GGG | 0.398095 | 7.1:+26507653 | MS.gene023837:CDS |
| TGCATCTGGAGATTGAGATT+TGG | 0.399324 | 7.1:-26509026 | None:intergenic |
| AATTTCTGAAAAGGCACAAC+TGG | 0.402570 | 7.1:+26494070 | MS.gene023837:CDS |
| TCATCTAAATCTAATGCATC+TGG | 0.405095 | 7.1:-26509040 | None:intergenic |
| GGTAGCTATAGAGTCTTTAG+AGG | 0.408041 | 7.1:+26493854 | MS.gene023837:CDS |
| TCTTGTTGTGGGCATTTCAA+TGG | 0.410241 | 7.1:+26506461 | MS.gene023837:CDS |
| GCTGGACTTCTTCTTGCTCC+TGG | 0.411130 | 7.1:+26506042 | MS.gene023837:CDS |
| CCTCCCTCTTTGACATGCTC+TGG | 0.411924 | 7.1:+26495243 | MS.gene023837:CDS |
| GTCATTTCTGCTTTAAGAGC+TGG | 0.413578 | 7.1:+26506024 | MS.gene023837:CDS |
| ATCCACCGCCGTTGTTCTGC+AGG | 0.414589 | 7.1:+26497278 | MS.gene023837:CDS |
| GACTCTCTTAGTTTCTTTGA+TGG | 0.415031 | 7.1:+26505981 | MS.gene023837:CDS |
| GGTGTTGAATTGGATGTTGT+AGG | 0.416861 | 7.1:+26493522 | MS.gene023837:CDS |
| AGTTGGTAGTGACAAAGATT+TGG | 0.417013 | 7.1:+26494322 | MS.gene023837:CDS |
| AAGAATAACAAGAAGTGTAT+TGG | 0.418951 | 7.1:-26503616 | None:intergenic |
| GACTTGGCTCCAAGGTCTCT+GGG | 0.419507 | 7.1:-26507942 | None:intergenic |
| CGCATGAACATTACGAATGA+TGG | 0.420208 | 7.1:-26496826 | None:intergenic |
| ATTGCAAGAAATTTCTGAAA+AGG | 0.420340 | 7.1:+26494061 | MS.gene023837:CDS |
| GTTGATTATGTGGAAGGTTC+GGG | 0.420418 | 7.1:+26493471 | MS.gene023837:CDS |
| AGTTCTTGGATTATTGTTGA+TGG | 0.421698 | 7.1:+26494661 | MS.gene023837:CDS |
| CCAGTGTCCCTTCAGAGACT+TGG | 0.421950 | 7.1:-26509066 | None:intergenic |
| GAAACAACAAAGAAGATAGC+TGG | 0.423735 | 7.1:-26506440 | None:intergenic |
| CTCGATCTCCCTGTGTACTT+TGG | 0.424274 | 7.1:+26507477 | MS.gene023837:CDS |
| TGTTGATTATGTGGAAGGTT+CGG | 0.426447 | 7.1:+26493470 | MS.gene023837:CDS |
| GGCAGGACTTTCCATGGCAT+TGG | 0.428354 | 7.1:+26504340 | MS.gene023837:intron |
| GTTCTTGGATTATTGTTGAT+GGG | 0.433192 | 7.1:+26494662 | MS.gene023837:CDS |
| TGCTGTCCAAAATGCTTCAA+TGG | 0.437926 | 7.1:+26493803 | MS.gene023837:CDS |
| GTTCTTGGCTACTTGGCTGC+TGG | 0.438283 | 7.1:+26496777 | MS.gene023837:CDS |
| AACATCATTCTGCTCGAAAC+GGG | 0.438877 | 7.1:-26506526 | None:intergenic |
| AAGAATGAGAAACTTCTTAT+GGG | 0.440591 | 7.1:+26493378 | MS.gene023837:CDS |
| AGCAGCTGCTGTGCTTGCTC+AGG | 0.445833 | 7.1:+26507972 | MS.gene023837:CDS |
| CACAATTTGTCAAATTATCC+TGG | 0.446689 | 7.1:-26493980 | None:intergenic |
| AGTTGCAAATGAAGAACATA+TGG | 0.447973 | 7.1:+26493773 | MS.gene023837:CDS |
| AAATGCTCAGCTCCTTCAAC+CGG | 0.451828 | 7.1:+26495000 | MS.gene023837:CDS |
| CCCAAAAGAAGGCCACGATA+TGG | 0.452885 | 7.1:-26504431 | None:intergenic |
| TGCTGGAGTTATTGGCTTGG+TGG | 0.453914 | 7.1:+26497191 | MS.gene023837:CDS |
| ACTAGGTCCTTCATAAGATC+GGG | 0.454946 | 7.1:+26507586 | MS.gene023837:intron |
| AATATCAGATTCAACCTGTA+AGG | 0.458853 | 7.1:-26504405 | None:intergenic |
| GCAGGACTTTCCATGGCATT+GGG | 0.463762 | 7.1:+26504341 | MS.gene023837:CDS |
| GCAGCCAAGTAGCCAAGAAC+AGG | 0.464694 | 7.1:-26496774 | None:intergenic |
| AAGGTTCGGGTGAGGATGCA+GGG | 0.464979 | 7.1:+26493484 | MS.gene023837:CDS |
| CCTGTGTACTTTGGAGATGC+TGG | 0.465387 | 7.1:+26507486 | MS.gene023837:CDS |
| CAATAATCCAAGAACTAGCT+TGG | 0.467392 | 7.1:-26494654 | None:intergenic |
| ACTAGCCGAGGCAAAACTTC+AGG | 0.473463 | 7.1:+26493833 | MS.gene023837:CDS |
| AGGTTCGGGTGAGGATGCAG+GGG | 0.473850 | 7.1:+26493485 | MS.gene023837:CDS |
| GAAGAATTAGGTGAAATAAG+AGG | 0.477526 | 7.1:-26500921 | None:intergenic |
| TAATGACATCTGCCGGTTGA+AGG | 0.481099 | 7.1:-26495012 | None:intergenic |
| TTGCAGGTGTTGCAGGAAAG+AGG | 0.481699 | 7.1:+26499588 | MS.gene023837:intron |
| TAACATCATTCTGCTCGAAA+CGG | 0.484281 | 7.1:-26506527 | None:intergenic |
| ATCACTCCATGGCTAGCTGC+AGG | 0.485272 | 7.1:+26506486 | MS.gene023837:CDS |
| ATTGAAAGAACTATTGCAAA+AGG | 0.485864 | 7.1:+26493605 | MS.gene023837:CDS |
| CACCTAATTCTTCCAAAGGA+GGG | 0.488132 | 7.1:+26500931 | MS.gene023837:CDS |
| CAGTGTCCCTTCAGAGACTT+GGG | 0.488711 | 7.1:-26509065 | None:intergenic |
| AACTGCTGGAGTTATTGGCT+TGG | 0.489063 | 7.1:+26497188 | MS.gene023837:CDS |
| AATAATCCAAGAACTAGCTT+GGG | 0.489205 | 7.1:-26494653 | None:intergenic |
| TTCCCGATAACTATAGCAGC+AGG | 0.491327 | 7.1:-26497240 | None:intergenic |
| TGAGAGGGAAATAGGAGTAG+AGG | 0.491543 | 7.1:+26493566 | MS.gene023837:CDS |
| ACCTGCAATTATGGCAGTAA+TGG | 0.491844 | 7.1:-26501209 | None:intergenic |
| TCAAACTTCCCAGTCGTCAC+GGG | 0.493265 | 7.1:+26505931 | MS.gene023837:CDS |
| TTTGGAAGAACCAACACAGT+TGG | 0.494222 | 7.1:+26494415 | MS.gene023837:CDS |
| GAATATTACCGCAGTAGCTC+CGG | 0.495343 | 7.1:-26507754 | None:intergenic |
| TGGATTTGGACGAGTTGGCC+AGG | 0.495547 | 7.1:+26506797 | MS.gene023837:CDS |
| TTGTGTTTCAGGTGGTAACT+TGG | 0.496119 | 7.1:-26494372 | None:intergenic |
| GAAGCAAGTGGAAGTTCTCT+TGG | 0.496230 | 7.1:+26508974 | MS.gene023837:CDS |
| GCAGGTGGTCCCAGAGACCT+TGG | 0.498309 | 7.1:+26507933 | MS.gene023837:intron |
| GCCCTGCTGCTATAGTTATC+GGG | 0.500456 | 7.1:+26497238 | MS.gene023837:CDS |
| TCATGGAGTGAATTTGGAAA+AGG | 0.501249 | 7.1:+26507731 | MS.gene023837:CDS |
| CGATAAAGACTTAACAGAAA+AGG | 0.502061 | 7.1:+26493917 | MS.gene023837:CDS |
| TTTCAGCCCCGATCTTATGA+AGG | 0.502701 | 7.1:-26507593 | None:intergenic |
| TTCATAAGATCGGGGCTGAA+AGG | 0.503107 | 7.1:+26507595 | MS.gene023837:CDS |
| TGGCCTCCTGCAGCTAGCCA+TGG | 0.503209 | 7.1:-26506492 | None:intergenic |
| CACTCCATGATCAACGTCAT+GGG | 0.504815 | 7.1:-26507718 | None:intergenic |
| ACCTAATTCTTCCAAAGGAG+GGG | 0.507007 | 7.1:+26500932 | MS.gene023837:CDS |
| AGCTGTTGCGTTTGAACTTG+AGG | 0.509280 | 7.1:+26494145 | MS.gene023837:CDS |
| ATTTGTGGATTTGGACGAGT+TGG | 0.510352 | 7.1:+26506792 | MS.gene023837:CDS |
| CTTATATAATCCAACTGTGT+TGG | 0.510738 | 7.1:-26494425 | None:intergenic |
| GACTAGGTCCTTCATAAGAT+CGG | 0.511146 | 7.1:+26507585 | MS.gene023837:intron |
| TACCCTGGCGGTCAAAAGAC+TGG | 0.511813 | 7.1:-26503643 | None:intergenic |
| TATAGTTATCGGGAATGGCC+TGG | 0.512014 | 7.1:+26497248 | MS.gene023837:CDS |
| TATATAAGTGATAATGAGAA+TGG | 0.512028 | 7.1:+26494440 | MS.gene023837:CDS |
| ACTCTCTTAGTTTCTTTGAT+GGG | 0.512450 | 7.1:+26505982 | MS.gene023837:CDS |
| GGACTTCTTCTTGCTCCTGG+TGG | 0.513266 | 7.1:+26506045 | MS.gene023837:CDS |
| CGCGCCCATGACGTTGATCA+TGG | 0.514688 | 7.1:+26507714 | MS.gene023837:CDS |
| GGAAAAGAAAAGAACGATGC+AGG | 0.515202 | 7.1:-26494560 | None:intergenic |
| CTCACATCTAGTGCAACAAA+TGG | 0.516548 | 7.1:-26506925 | None:intergenic |
| TCCAATTCAACACCAGCTAC+AGG | 0.517624 | 7.1:-26493513 | None:intergenic |
| CCCAGTCGTCACGGGGACAT+TGG | 0.521139 | 7.1:+26505939 | MS.gene023837:CDS |
| AGAAGAAAGTTCTTCAGCAC+TGG | 0.522369 | 7.1:-26495038 | None:intergenic |
| TAAAGAAGAGCCCCAAAAGA+AGG | 0.522430 | 7.1:-26504442 | None:intergenic |
| GCGAGAGCACATCACGGCAT+GGG | 0.525983 | 7.1:+26499610 | MS.gene023837:CDS |
| AGAAATATGAATATGGATAT+GGG | 0.531230 | 7.1:+26493102 | None:intergenic |
| ATATTTATCCCAGGTGAATG+AGG | 0.531961 | 7.1:+26495214 | MS.gene023837:intron |
| AGAAGATATAAAGAAATGCC+AGG | 0.532664 | 7.1:+26493962 | MS.gene023837:CDS |
| GAGGTTGAGAAATATGAATA+TGG | 0.532872 | 7.1:+26493095 | None:intergenic |
| TCATAAGATCGGGGCTGAAA+GGG | 0.533221 | 7.1:+26507596 | MS.gene023837:CDS |
| CCAAGTCTCTGAAGGGACAC+TGG | 0.533633 | 7.1:+26509066 | MS.gene023837:CDS |
| GCAGCTGCTAGTTGAAGACT+TGG | 0.534379 | 7.1:-26507958 | None:intergenic |
| GATTATTGTTGATGGGAGCA+GGG | 0.534434 | 7.1:+26494669 | MS.gene023837:CDS |
| CGAAACGGGAAGCAATCAGC+TGG | 0.535107 | 7.1:-26506512 | None:intergenic |
| CATTGCTGAAGCTCTTGGAC+TGG | 0.535509 | 7.1:+26501165 | MS.gene023837:CDS |
| TGCAGCTAGCCATGGAGTGA+TGG | 0.535942 | 7.1:-26506484 | None:intergenic |
| GTCGCTGAAATCTCTGATGC+CGG | 0.538137 | 7.1:-26508545 | None:intergenic |
| CGAATGATGGAGAGACCATA+AGG | 0.538414 | 7.1:-26496813 | None:intergenic |
| CATAATTGCAGGTGGACGAT+TGG | 0.539123 | 7.1:+26501219 | MS.gene023837:CDS |
| ACAGTGAAAGAGTGGCAGTT+GGG | 0.539147 | 7.1:+26507448 | MS.gene023837:intron |
| TAAAGTCAAAACAACCTACT+TGG | 0.539504 | 7.1:-26493194 | None:intergenic |
| ACAACAGGCAGGACTTTCCA+TGG | 0.540010 | 7.1:+26504334 | MS.gene023837:intron |
| TTCAAACTTCCCAGTCGTCA+CGG | 0.541112 | 7.1:+26505930 | MS.gene023837:CDS |
| TTTGGGGCTCTTCTTTATGA+CGG | 0.541487 | 7.1:+26504448 | MS.gene023837:CDS |
| AATTAACATCATCCAAAGAC+CGG | 0.542928 | 7.1:-26493728 | None:intergenic |
| CGCAATGTTGATTATGTGGA+AGG | 0.544410 | 7.1:+26493465 | MS.gene023837:CDS |
| ATAACTATAGCAGCAGGGCC+AGG | 0.545855 | 7.1:-26497234 | None:intergenic |
| GCTATTACTCTAGATACGCC+TGG | 0.547444 | 7.1:+26507630 | MS.gene023837:CDS |
| TTGCAGATAGTATGAGGCCC+TGG | 0.547805 | 7.1:-26494619 | None:intergenic |
| GGCGAGAGCACATCACGGCA+TGG | 0.547832 | 7.1:+26499609 | MS.gene023837:CDS |
| TGGTCGCAATGTTGATTATG+TGG | 0.548307 | 7.1:+26493461 | MS.gene023837:CDS |
| CCAATGTCCCCGTGACGACT+GGG | 0.549660 | 7.1:-26505939 | None:intergenic |
| ACTGTTCTATAATTTGCTCC+AGG | 0.550693 | 7.1:-26507648 | None:intergenic |
| TCACCTAATTCTTCCAAAGG+AGG | 0.551702 | 7.1:+26500930 | MS.gene023837:CDS |
| AACAGTGAAAGAGTGGCAGT+TGG | 0.555276 | 7.1:+26507447 | MS.gene023837:intron |
| TTTATTTAATATTGGCCTGG+AGG | 0.557808 | 7.1:+26496884 | MS.gene023837:CDS |
| GCTGCTATAGTTATCGGGAA+TGG | 0.559009 | 7.1:+26497243 | MS.gene023837:CDS |
| AAGATTTGGTTGAAGTGTCA+GGG | 0.563485 | 7.1:+26493408 | MS.gene023837:CDS |
| TCACTCCATGATCAACGTCA+TGG | 0.563853 | 7.1:-26507719 | None:intergenic |
| ATTTCACCTAATTCTTCCAA+AGG | 0.564809 | 7.1:+26500927 | MS.gene023837:CDS |
| AAACAACAAAGAAGATAGCT+GGG | 0.567027 | 7.1:-26506439 | None:intergenic |
| AGATGTTGTTCTTGTTTCCG+AGG | 0.569347 | 7.1:+26494265 | MS.gene023837:CDS |
| CGGCGGTGGATGATAAAGCC+AGG | 0.569465 | 7.1:-26497266 | None:intergenic |
| TGTTGAATTGGATGTTGTAG+GGG | 0.571267 | 7.1:+26493524 | MS.gene023837:CDS |
| CTGGTCATAATGACATCTGC+CGG | 0.572203 | 7.1:-26495019 | None:intergenic |
| TTCGGGTGAGGATGCAGGGG+TGG | 0.572339 | 7.1:+26493488 | MS.gene023837:CDS |
| ACTTTCTACCATGTTCTCCT+CGG | 0.573353 | 7.1:-26494282 | None:intergenic |
| TGCGTCGTTACCTCATCAAG+AGG | 0.575417 | 7.1:+26495120 | MS.gene023837:CDS |
| GATGATGCCCAAGTCTCTGA+AGG | 0.576362 | 7.1:+26509058 | MS.gene023837:CDS |
| TTTATTACCTGTAGAAAGTG+AGG | 0.581710 | 7.1:+26506554 | MS.gene023837:CDS |
| AACAAATGGAATAAGTCGCT+CGG | 0.584151 | 7.1:-26506911 | None:intergenic |
| AATGGCTCTTTCACTAGCCG+AGG | 0.592979 | 7.1:+26493821 | MS.gene023837:CDS |
| CAATATTAACAGTGAAAGAG+TGG | 0.593017 | 7.1:+26507440 | MS.gene023837:intron |
| TTGTTGCACTAGATGTGAGA+AGG | 0.595150 | 7.1:+26506929 | MS.gene023837:CDS |
| CTTGCTTGTATATTGGCCGA+AGG | 0.595545 | 7.1:-26503560 | None:intergenic |
| TAGTTGAAGACTTGGCTCCA+AGG | 0.598124 | 7.1:-26507950 | None:intergenic |
| TTTCAATGGCCATCACTCCA+TGG | 0.599069 | 7.1:+26506475 | MS.gene023837:CDS |
| TTATGTGGAAGGTTCGGGTG+AGG | 0.599751 | 7.1:+26493476 | MS.gene023837:CDS |
| AGCTCTTAAAGCAGAAATGA+CGG | 0.602427 | 7.1:-26506022 | None:intergenic |
| CTATAGCAGCAGGGCCAGGT+AGG | 0.602783 | 7.1:-26497230 | None:intergenic |
| TCTTGTTTCCGAGGAGAACA+TGG | 0.604876 | 7.1:+26494274 | MS.gene023837:CDS |
| AAAGGCCTTGAAAGAGCTTG+AGG | 0.606145 | 7.1:+26493623 | MS.gene023837:CDS |
| AACCTGCAGAACAACGGCGG+TGG | 0.607892 | 7.1:-26497280 | None:intergenic |
| TTTCGGATTAGGTTCTGCGC+AGG | 0.608084 | 7.1:+26497046 | MS.gene023837:CDS |
| CTGAAAGCTCAGCTAGATGT+CGG | 0.608672 | 7.1:-26508586 | None:intergenic |
| TTGGTGGCTCATTATATCTG+TGG | 0.608804 | 7.1:+26497207 | MS.gene023837:CDS |
| TCTGATATTGCTCCATATCG+TGG | 0.610625 | 7.1:+26504419 | MS.gene023837:CDS |
| TTTATTAACCTGCAGAACAA+CGG | 0.611301 | 7.1:-26497286 | None:intergenic |
| CAGTCCAAGAGCTTCAGCAA+TGG | 0.611813 | 7.1:-26501164 | None:intergenic |
| CAGCATCTCCAAAGTACACA+GGG | 0.613542 | 7.1:-26507485 | None:intergenic |
| CTGGAAAACCGATGTTGGTG+TGG | 0.615407 | 7.1:-26494600 | None:intergenic |
| TGCTCTATTGGCATAGACAG+CGG | 0.615854 | 7.1:-26494972 | None:intergenic |
| TAACCAGAGCATGTCAAAGA+GGG | 0.617443 | 7.1:-26495246 | None:intergenic |
| GGCTGAGTCCACACCAACAT+CGG | 0.618140 | 7.1:+26494592 | MS.gene023837:CDS |
| GAAAAGCAAACCTCTTGATG+AGG | 0.619192 | 7.1:-26495130 | None:intergenic |
| GGAGTGAATTTGGAAAAGGC+CGG | 0.622279 | 7.1:+26507735 | MS.gene023837:CDS |
| CAAAGATGCATCATCACTTG+TGG | 0.622519 | 7.1:-26494345 | None:intergenic |
| ATAACCAGAGCATGTCAAAG+AGG | 0.626787 | 7.1:-26495247 | None:intergenic |
| CCAGCATCTCCAAAGTACAC+AGG | 0.627720 | 7.1:-26507486 | None:intergenic |
| ACAAATGCAAATTCTCCACC+AGG | 0.629677 | 7.1:-26506060 | None:intergenic |
| GGAAAAGGCCGGAGCTACTG+CGG | 0.630951 | 7.1:+26507746 | MS.gene023837:CDS |
| ACATCTAGCTGAGCTTTCAG+AGG | 0.634116 | 7.1:+26508589 | MS.gene023837:CDS |
| GAAAGTTCTAATGAGAGCGA+TGG | 0.634738 | 7.1:+26493894 | MS.gene023837:CDS |
| GGATAATTTGACAAATTGTG+AGG | 0.635672 | 7.1:+26493983 | MS.gene023837:CDS |
| GTTGAATTGGATGTTGTAGG+GGG | 0.638644 | 7.1:+26493525 | MS.gene023837:CDS |
| CCAGAGCATGTCAAAGAGGG+AGG | 0.644078 | 7.1:-26495243 | None:intergenic |
| CAAACTTCCCAGTCGTCACG+GGG | 0.646934 | 7.1:+26505932 | MS.gene023837:CDS |
| AGGCCCTGGAAAACCGATGT+TGG | 0.650370 | 7.1:-26494605 | None:intergenic |
| GGATGCAGTGAAAGCTGAGG+AGG | 0.652280 | 7.1:+26494091 | MS.gene023837:CDS |
| ACTCCATGGCTAGCTGCAGG+AGG | 0.652427 | 7.1:+26506489 | MS.gene023837:CDS |
| ATGCAGCTGTGTGAAGCAAG+TGG | 0.653482 | 7.1:+26508962 | MS.gene023837:intron |
| TGGAGATGCTGGCAGTCGAG+AGG | 0.657083 | 7.1:+26507497 | MS.gene023837:CDS |
| ATGATGCCCAAGTCTCTGAA+GGG | 0.658384 | 7.1:+26509059 | MS.gene023837:CDS |
| TGGTAATTGAGTTACCTCCA+GGG | 0.658952 | 7.1:-26495310 | None:intergenic |
| TACAAACATAATGCTTCTAG+CGG | 0.659352 | 7.1:+26494118 | MS.gene023837:CDS |
| ATTAACATCATCCAAAGACC+GGG | 0.660479 | 7.1:-26493727 | None:intergenic |
| ATTACTGCCATAATTGCAGG+TGG | 0.662279 | 7.1:+26501211 | MS.gene023837:CDS |
| CCGTGTAAAATTCTTGACTG+TGG | 0.669322 | 7.1:-26493135 | None:intergenic |
| CAAATTGTGAGGTAGAGTTG+AGG | 0.674319 | 7.1:+26493994 | MS.gene023837:CDS |
| TCCCGATAACTATAGCAGCA+GGG | 0.676337 | 7.1:-26497239 | None:intergenic |
| CTAGGTCCTTCATAAGATCG+GGG | 0.680706 | 7.1:+26507587 | MS.gene023837:intron |
| ACTGGATGCAGTGAAAGCTG+AGG | 0.687698 | 7.1:+26494088 | MS.gene023837:CDS |
| AAAGAGGCGAGAGCACATCA+CGG | 0.688490 | 7.1:+26499604 | MS.gene023837:CDS |
| ATTAACCTGCAGAACAACGG+CGG | 0.694494 | 7.1:-26497283 | None:intergenic |
| ACATTGGCACTCTTAATATG+CGG | 0.696662 | 7.1:+26505955 | MS.gene023837:CDS |
| AGGATAATCACGTACCCTGG+CGG | 0.707499 | 7.1:-26503655 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 26493108 | 26509096 | 26493108 | ID=MS.gene023837 |
| chr7.1 | mRNA | 26493108 | 26509096 | 26493108 | ID=MS.gene023837.t1;Parent=MS.gene023837 |
| chr7.1 | exon | 26493108 | 26494690 | 26493108 | ID=MS.gene023837.t1.exon1;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26493108 | 26494690 | 26493108 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26494970 | 26495141 | 26494970 | ID=MS.gene023837.t1.exon2;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26494970 | 26495141 | 26494970 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26495227 | 26495317 | 26495227 | ID=MS.gene023837.t1.exon3;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26495227 | 26495317 | 26495227 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26496769 | 26496905 | 26496769 | ID=MS.gene023837.t1.exon4;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26496769 | 26496905 | 26496769 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26497008 | 26497067 | 26497008 | ID=MS.gene023837.t1.exon5;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26497008 | 26497067 | 26497008 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26497180 | 26497299 | 26497180 | ID=MS.gene023837.t1.exon6;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26497180 | 26497299 | 26497180 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26499594 | 26499662 | 26499594 | ID=MS.gene023837.t1.exon7;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26499594 | 26499662 | 26499594 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26500888 | 26500953 | 26500888 | ID=MS.gene023837.t1.exon8;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26500888 | 26500953 | 26500888 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26501151 | 26501240 | 26501151 | ID=MS.gene023837.t1.exon9;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26501151 | 26501240 | 26501151 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26503558 | 26503662 | 26503558 | ID=MS.gene023837.t1.exon10;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26503558 | 26503662 | 26503558 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26504341 | 26504469 | 26504341 | ID=MS.gene023837.t1.exon11;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26504341 | 26504469 | 26504341 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26505898 | 26506107 | 26505898 | ID=MS.gene023837.t1.exon12;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26505898 | 26506107 | 26505898 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26506426 | 26506575 | 26506426 | ID=MS.gene023837.t1.exon13;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26506426 | 26506575 | 26506426 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26506765 | 26506818 | 26506765 | ID=MS.gene023837.t1.exon14;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26506765 | 26506818 | 26506765 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26506892 | 26506950 | 26506892 | ID=MS.gene023837.t1.exon15;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26506892 | 26506950 | 26506892 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26507452 | 26507518 | 26507452 | ID=MS.gene023837.t1.exon16;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26507452 | 26507518 | 26507452 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26507591 | 26507767 | 26507591 | ID=MS.gene023837.t1.exon17;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26507591 | 26507767 | 26507591 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26507937 | 26507993 | 26507937 | ID=MS.gene023837.t1.exon18;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26507937 | 26507993 | 26507937 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26508536 | 26508610 | 26508536 | ID=MS.gene023837.t1.exon19;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26508536 | 26508610 | 26508536 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| chr7.1 | exon | 26508968 | 26509096 | 26508968 | ID=MS.gene023837.t1.exon20;Parent=MS.gene023837.t1 |
| chr7.1 | CDS | 26508968 | 26509096 | 26508968 | ID=cds.MS.gene023837.t1;Parent=MS.gene023837.t1 |
| Gene Sequence |
| Protein sequence |
