Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002696.t1 | XP_003593874.1 | 98.8 | 581 | 7 | 0 | 1 | 581 | 1 | 581 | 0.00E+00 | 1137.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002696.t1 | Q9LYW0 | 64.4 | 592 | 197 | 7 | 1 | 586 | 1 | 584 | 9.5e-216 | 751.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002696.t1 | G7IP40 | 98.8 | 581 | 7 | 0 | 1 | 581 | 1 | 581 | 0.0e+00 | 1137.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene073115 | MS.gene002696 | PPI |
| MS.gene053563 | MS.gene002696 | PPI |
| MS.gene028462 | MS.gene002696 | PPI |
| MS.gene35341 | MS.gene002696 | PPI |
| MS.gene068040 | MS.gene002696 | PPI |
| MS.gene002696 | MS.gene90204 | PPI |
| MS.gene02183 | MS.gene002696 | PPI |
| MS.gene91505 | MS.gene002696 | PPI |
| MS.gene94631 | MS.gene002696 | PPI |
| MS.gene002224 | MS.gene002696 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002696.t1 | MTR_2g018750 | 98.520 | 608 | 8 | 1 | 1 | 608 | 1 | 607 | 0.0 | 1236 |
| MS.gene002696.t1 | MTR_1g064360 | 70.458 | 589 | 139 | 7 | 1 | 581 | 1 | 562 | 0.0 | 815 |
| MS.gene002696.t1 | MTR_1g094850 | 53.613 | 595 | 264 | 6 | 1 | 589 | 1 | 589 | 0.0 | 641 |
| MS.gene002696.t1 | MTR_2g048390 | 57.582 | 455 | 182 | 7 | 1 | 447 | 1 | 452 | 0.0 | 525 |
| MS.gene002696.t1 | MTR_8g078900 | 38.623 | 668 | 338 | 18 | 4 | 606 | 1 | 661 | 3.10e-148 | 443 |
| MS.gene002696.t1 | MTR_2g084595 | 37.161 | 627 | 348 | 10 | 9 | 601 | 6 | 620 | 2.70e-140 | 422 |
| MS.gene002696.t1 | MTR_2g009340 | 38.844 | 623 | 321 | 12 | 1 | 569 | 19 | 635 | 2.56e-139 | 421 |
| MS.gene002696.t1 | MTR_8g078900 | 38.110 | 635 | 324 | 17 | 37 | 606 | 1 | 631 | 7.72e-136 | 410 |
| MS.gene002696.t1 | MTR_4g093850 | 38.862 | 615 | 320 | 11 | 1 | 567 | 19 | 625 | 3.43e-135 | 410 |
| MS.gene002696.t1 | MTR_8g078900 | 38.995 | 577 | 305 | 14 | 74 | 607 | 46 | 618 | 2.02e-131 | 399 |
| MS.gene002696.t1 | MTR_4g022330 | 36.752 | 585 | 321 | 12 | 14 | 576 | 23 | 580 | 3.96e-118 | 364 |
| MS.gene002696.t1 | MTR_5g016060 | 36.182 | 550 | 296 | 9 | 20 | 561 | 34 | 536 | 4.64e-116 | 359 |
| MS.gene002696.t1 | MTR_1g014070 | 40.755 | 503 | 276 | 11 | 1 | 497 | 1 | 487 | 5.17e-116 | 358 |
| MS.gene002696.t1 | MTR_7g073980 | 39.083 | 545 | 284 | 13 | 26 | 550 | 33 | 549 | 8.77e-116 | 359 |
| MS.gene002696.t1 | MTR_5g032780 | 40.226 | 532 | 279 | 9 | 1 | 502 | 1 | 523 | 4.05e-115 | 357 |
| MS.gene002696.t1 | MTR_8g078900 | 40.851 | 470 | 245 | 11 | 4 | 447 | 1 | 463 | 8.98e-115 | 350 |
| MS.gene002696.t1 | MTR_5g015790 | 40.358 | 503 | 275 | 12 | 1 | 498 | 1 | 483 | 4.29e-110 | 344 |
| MS.gene002696.t1 | MTR_1g106430 | 35.738 | 596 | 341 | 14 | 1 | 587 | 1 | 563 | 5.01e-109 | 341 |
| MS.gene002696.t1 | MTR_3g062540 | 35.765 | 562 | 277 | 10 | 12 | 561 | 11 | 500 | 6.74e-109 | 338 |
| MS.gene002696.t1 | MTR_2g084595 | 38.053 | 452 | 255 | 5 | 9 | 447 | 6 | 445 | 6.19e-108 | 332 |
| MS.gene002696.t1 | MTR_4g093850 | 39.666 | 479 | 250 | 8 | 1 | 447 | 19 | 490 | 1.50e-106 | 332 |
| MS.gene002696.t1 | MTR_8g090220 | 33.548 | 620 | 328 | 14 | 26 | 605 | 52 | 627 | 1.37e-104 | 330 |
| MS.gene002696.t1 | MTR_4g095430 | 36.382 | 492 | 281 | 9 | 20 | 505 | 7 | 472 | 8.68e-104 | 326 |
| MS.gene002696.t1 | MTR_5g075640 | 35.119 | 504 | 279 | 7 | 12 | 505 | 12 | 477 | 9.33e-102 | 320 |
| MS.gene002696.t1 | MTR_8g090220 | 36.978 | 503 | 246 | 11 | 26 | 499 | 52 | 512 | 4.79e-101 | 317 |
| MS.gene002696.t1 | MTR_1g088885 | 34.385 | 602 | 340 | 14 | 2 | 575 | 13 | 587 | 1.57e-99 | 316 |
| MS.gene002696.t1 | MTR_4g134210 | 35.341 | 498 | 295 | 6 | 1 | 496 | 1 | 473 | 1.07e-98 | 313 |
| MS.gene002696.t1 | MTR_8g078900 | 42.408 | 382 | 208 | 8 | 74 | 447 | 46 | 423 | 4.27e-98 | 306 |
| MS.gene002696.t1 | MTR_7g108290 | 34.992 | 603 | 336 | 16 | 9 | 578 | 20 | 599 | 4.61e-98 | 313 |
| MS.gene002696.t1 | MTR_3g062540 | 34.659 | 528 | 262 | 9 | 46 | 561 | 2 | 458 | 5.11e-96 | 304 |
| MS.gene002696.t1 | MTR_8g069330 | 36.697 | 545 | 269 | 13 | 1 | 514 | 1 | 500 | 6.09e-95 | 303 |
| MS.gene002696.t1 | MTR_5g075640 | 34.468 | 470 | 261 | 6 | 46 | 505 | 2 | 434 | 5.40e-90 | 288 |
| MS.gene002696.t1 | MTR_2g027410 | 34.331 | 501 | 286 | 8 | 1 | 496 | 1 | 463 | 2.56e-88 | 285 |
| MS.gene002696.t1 | MTR_1g082690 | 30.556 | 504 | 283 | 8 | 11 | 505 | 43 | 488 | 9.73e-83 | 270 |
| MS.gene002696.t1 | MTR_5g016060 | 34.120 | 466 | 254 | 8 | 104 | 561 | 2 | 422 | 1.03e-82 | 269 |
| MS.gene002696.t1 | MTR_2g027410 | 34.192 | 427 | 240 | 7 | 75 | 496 | 1 | 391 | 5.79e-71 | 237 |
| MS.gene002696.t1 | MTR_4g011530 | 32.552 | 384 | 227 | 8 | 206 | 576 | 38 | 402 | 5.46e-63 | 215 |
| MS.gene002696.t1 | MTR_2g102730 | 33.894 | 357 | 211 | 4 | 214 | 563 | 24 | 362 | 1.35e-59 | 205 |
| MS.gene002696.t1 | MTR_4g045767 | 27.574 | 573 | 333 | 17 | 35 | 573 | 14 | 538 | 1.93e-55 | 197 |
| MS.gene002696.t1 | MTR_4g074190 | 27.126 | 494 | 311 | 12 | 29 | 502 | 6 | 470 | 7.03e-49 | 179 |
| MS.gene002696.t1 | MTR_1g035720 | 25.303 | 577 | 330 | 17 | 29 | 562 | 6 | 524 | 3.76e-48 | 176 |
| MS.gene002696.t1 | MTR_4g074190 | 27.716 | 451 | 279 | 10 | 70 | 502 | 3 | 424 | 5.72e-48 | 175 |
| MS.gene002696.t1 | MTR_4g074190 | 25.624 | 441 | 279 | 12 | 29 | 449 | 6 | 417 | 1.12e-36 | 142 |
| MS.gene002696.t1 | MTR_2g048375 | 50.382 | 131 | 52 | 2 | 464 | 581 | 1 | 131 | 1.88e-32 | 123 |
| MS.gene002696.t1 | MTR_1g105870 | 33.663 | 202 | 115 | 4 | 33 | 233 | 38 | 221 | 1.24e-30 | 121 |
| MS.gene002696.t1 | MTR_2g010890 | 26.195 | 481 | 289 | 15 | 94 | 561 | 1 | 428 | 2.18e-27 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene002696.t1 | AT5G03250 | 64.214 | 598 | 192 | 8 | 1 | 588 | 1 | 586 | 0.0 | 784 |
| MS.gene002696.t1 | AT1G30440 | 49.373 | 638 | 281 | 10 | 1 | 597 | 1 | 637 | 0.0 | 617 |
| MS.gene002696.t1 | AT5G13600 | 55.316 | 602 | 223 | 13 | 1 | 584 | 1 | 574 | 0.0 | 612 |
| MS.gene002696.t1 | AT5G03250 | 61.728 | 486 | 164 | 8 | 113 | 588 | 1 | 474 | 0.0 | 605 |
| MS.gene002696.t1 | AT5G66560 | 39.219 | 691 | 299 | 18 | 1 | 596 | 1 | 665 | 7.05e-151 | 450 |
| MS.gene002696.t1 | AT3G44820 | 38.640 | 647 | 325 | 13 | 8 | 602 | 5 | 631 | 5.33e-148 | 442 |
| MS.gene002696.t1 | AT5G66560 | 38.321 | 655 | 290 | 17 | 37 | 596 | 1 | 636 | 2.75e-138 | 417 |
| MS.gene002696.t1 | AT5G66560 | 40.517 | 580 | 273 | 16 | 70 | 596 | 66 | 626 | 4.40e-135 | 408 |
| MS.gene002696.t1 | AT3G50840 | 38.833 | 600 | 304 | 16 | 18 | 596 | 7 | 564 | 8.93e-128 | 387 |
| MS.gene002696.t1 | AT5G48800 | 38.255 | 596 | 287 | 12 | 14 | 576 | 30 | 577 | 1.68e-120 | 370 |
| MS.gene002696.t1 | AT5G67385 | 38.306 | 496 | 276 | 9 | 12 | 504 | 12 | 480 | 1.03e-113 | 352 |
| MS.gene002696.t1 | AT3G50840 | 37.368 | 570 | 295 | 15 | 47 | 596 | 1 | 528 | 4.97e-113 | 348 |
| MS.gene002696.t1 | AT3G50840 | 37.368 | 570 | 295 | 15 | 47 | 596 | 1 | 528 | 4.97e-113 | 348 |
| MS.gene002696.t1 | AT5G66560 | 40.200 | 500 | 225 | 12 | 1 | 447 | 1 | 479 | 1.20e-110 | 340 |
| MS.gene002696.t1 | AT3G08570 | 37.868 | 544 | 294 | 11 | 26 | 550 | 34 | 552 | 7.93e-108 | 337 |
| MS.gene002696.t1 | AT1G67900 | 39.006 | 523 | 280 | 8 | 1 | 498 | 1 | 509 | 7.71e-107 | 335 |
| MS.gene002696.t1 | AT1G67900 | 39.006 | 523 | 280 | 8 | 1 | 498 | 1 | 509 | 7.71e-107 | 335 |
| MS.gene002696.t1 | AT1G67900 | 39.006 | 523 | 280 | 8 | 1 | 498 | 1 | 509 | 7.71e-107 | 335 |
| MS.gene002696.t1 | AT1G67900 | 39.006 | 523 | 280 | 8 | 1 | 498 | 1 | 509 | 7.71e-107 | 335 |
| MS.gene002696.t1 | AT1G67900 | 39.006 | 523 | 280 | 8 | 1 | 498 | 1 | 509 | 7.71e-107 | 335 |
| MS.gene002696.t1 | AT1G67900 | 39.006 | 523 | 280 | 8 | 1 | 498 | 1 | 509 | 7.71e-107 | 335 |
| MS.gene002696.t1 | AT4G37590 | 38.012 | 513 | 255 | 12 | 1 | 498 | 1 | 465 | 1.71e-106 | 333 |
| MS.gene002696.t1 | AT1G03010 | 36.441 | 590 | 311 | 14 | 24 | 575 | 7 | 570 | 4.21e-105 | 330 |
| MS.gene002696.t1 | AT1G03010 | 35.961 | 609 | 325 | 15 | 5 | 575 | 16 | 597 | 5.31e-105 | 331 |
| MS.gene002696.t1 | AT1G03010 | 36.181 | 597 | 313 | 15 | 20 | 574 | 25 | 595 | 1.05e-104 | 330 |
| MS.gene002696.t1 | AT4G31820 | 37.822 | 505 | 270 | 11 | 1 | 498 | 1 | 468 | 1.09e-103 | 325 |
| MS.gene002696.t1 | AT2G30520 | 36.166 | 506 | 279 | 10 | 4 | 504 | 9 | 475 | 2.69e-103 | 325 |
| MS.gene002696.t1 | AT5G10250 | 33.277 | 589 | 311 | 12 | 12 | 567 | 36 | 575 | 6.90e-102 | 322 |
| MS.gene002696.t1 | AT3G08660 | 35.401 | 548 | 294 | 10 | 26 | 560 | 34 | 534 | 8.30e-102 | 321 |
| MS.gene002696.t1 | AT2G14820 | 37.647 | 510 | 292 | 12 | 1 | 502 | 1 | 492 | 5.56e-101 | 320 |
| MS.gene002696.t1 | AT2G14820 | 37.647 | 510 | 292 | 12 | 1 | 502 | 1 | 492 | 5.56e-101 | 320 |
| MS.gene002696.t1 | AT2G47860 | 34.219 | 602 | 330 | 14 | 5 | 573 | 17 | 585 | 1.02e-100 | 320 |
| MS.gene002696.t1 | AT5G67385 | 37.310 | 461 | 260 | 8 | 47 | 504 | 1 | 435 | 4.85e-100 | 315 |
| MS.gene002696.t1 | AT5G67385 | 37.310 | 461 | 260 | 8 | 47 | 504 | 1 | 435 | 4.85e-100 | 315 |
| MS.gene002696.t1 | AT5G67385 | 37.310 | 461 | 260 | 8 | 47 | 504 | 1 | 435 | 4.85e-100 | 315 |
| MS.gene002696.t1 | AT5G67385 | 37.310 | 461 | 260 | 8 | 47 | 504 | 1 | 435 | 4.85e-100 | 315 |
| MS.gene002696.t1 | AT5G67440 | 37.573 | 511 | 283 | 12 | 1 | 504 | 1 | 482 | 9.31e-100 | 315 |
| MS.gene002696.t1 | AT5G67440 | 37.573 | 511 | 283 | 12 | 1 | 504 | 1 | 482 | 9.31e-100 | 315 |
| MS.gene002696.t1 | AT5G10250 | 33.161 | 579 | 310 | 12 | 12 | 567 | 36 | 560 | 2.59e-97 | 310 |
| MS.gene002696.t1 | AT2G47860 | 32.960 | 625 | 330 | 15 | 5 | 573 | 17 | 608 | 1.84e-95 | 306 |
| MS.gene002696.t1 | AT2G23050 | 35.673 | 513 | 268 | 11 | 1 | 506 | 1 | 458 | 1.84e-95 | 301 |
| MS.gene002696.t1 | AT3G26490 | 37.072 | 526 | 284 | 14 | 1 | 498 | 1 | 507 | 2.32e-92 | 296 |
| MS.gene002696.t1 | AT3G26490 | 37.072 | 526 | 284 | 14 | 1 | 498 | 1 | 507 | 2.32e-92 | 296 |
| MS.gene002696.t1 | AT3G26490 | 37.072 | 526 | 284 | 14 | 1 | 498 | 1 | 507 | 2.32e-92 | 296 |
| MS.gene002696.t1 | AT3G08660 | 35.375 | 506 | 270 | 9 | 66 | 558 | 11 | 472 | 3.55e-92 | 294 |
| MS.gene002696.t1 | AT2G30520 | 35.560 | 464 | 256 | 9 | 46 | 504 | 2 | 427 | 3.02e-90 | 290 |
| MS.gene002696.t1 | AT2G30520 | 35.560 | 464 | 256 | 9 | 46 | 504 | 2 | 427 | 3.02e-90 | 290 |
| MS.gene002696.t1 | AT5G67440 | 36.809 | 470 | 262 | 11 | 41 | 504 | 5 | 445 | 2.41e-88 | 285 |
| MS.gene002696.t1 | AT5G47800 | 32.673 | 505 | 300 | 9 | 1 | 496 | 1 | 474 | 3.97e-87 | 282 |
| MS.gene002696.t1 | AT5G47800 | 32.673 | 505 | 300 | 9 | 1 | 496 | 1 | 474 | 3.97e-87 | 282 |
| MS.gene002696.t1 | AT5G47800 | 32.673 | 505 | 300 | 9 | 1 | 496 | 1 | 474 | 3.97e-87 | 282 |
| MS.gene002696.t1 | AT5G47800 | 32.673 | 505 | 300 | 9 | 1 | 496 | 114 | 587 | 8.25e-86 | 281 |
| MS.gene002696.t1 | AT4G31820 | 35.841 | 452 | 247 | 10 | 53 | 498 | 1 | 415 | 8.96e-84 | 272 |
| MS.gene002696.t1 | AT3G49970 | 33.778 | 450 | 237 | 9 | 36 | 483 | 4 | 394 | 1.08e-80 | 263 |
| MS.gene002696.t1 | AT3G49970 | 33.778 | 450 | 237 | 9 | 36 | 483 | 4 | 394 | 1.08e-80 | 263 |
| MS.gene002696.t1 | AT3G08660 | 34.873 | 433 | 228 | 9 | 24 | 449 | 32 | 417 | 2.29e-74 | 244 |
| MS.gene002696.t1 | AT2G47860 | 34.348 | 460 | 252 | 12 | 5 | 447 | 17 | 443 | 1.77e-72 | 240 |
| MS.gene002696.t1 | AT3G26490 | 34.664 | 476 | 264 | 14 | 1 | 448 | 1 | 457 | 4.17e-69 | 233 |
| MS.gene002696.t1 | AT2G47860 | 32.712 | 483 | 252 | 13 | 5 | 447 | 17 | 466 | 1.62e-67 | 227 |
| MS.gene002696.t1 | AT2G47860 | 31.984 | 494 | 276 | 12 | 113 | 573 | 1 | 467 | 2.74e-67 | 228 |
| MS.gene002696.t1 | AT2G47860 | 31.984 | 494 | 276 | 12 | 113 | 573 | 1 | 467 | 2.74e-67 | 228 |
| MS.gene002696.t1 | AT5G64330 | 40.909 | 286 | 148 | 4 | 7 | 278 | 33 | 311 | 3.04e-64 | 223 |
| MS.gene002696.t1 | AT5G64330 | 46.091 | 243 | 117 | 1 | 276 | 504 | 369 | 611 | 1.46e-58 | 208 |
| MS.gene002696.t1 | AT5G64330 | 40.909 | 286 | 148 | 4 | 7 | 278 | 33 | 311 | 1.15e-63 | 223 |
| MS.gene002696.t1 | AT5G64330 | 46.091 | 243 | 117 | 1 | 276 | 504 | 369 | 611 | 2.28e-58 | 209 |
| MS.gene002696.t1 | AT2G23050 | 33.501 | 397 | 206 | 9 | 113 | 506 | 1 | 342 | 1.59e-59 | 203 |
| MS.gene002696.t1 | AT5G64330 | 46.091 | 243 | 117 | 1 | 276 | 504 | 310 | 552 | 5.63e-59 | 208 |
| MS.gene002696.t1 | AT5G64330 | 40.945 | 254 | 129 | 4 | 39 | 278 | 6 | 252 | 3.19e-52 | 189 |
| MS.gene002696.t1 | AT1G52770 | 33.842 | 393 | 210 | 7 | 214 | 580 | 28 | 396 | 1.52e-58 | 203 |
| MS.gene002696.t1 | AT5G17580 | 29.918 | 488 | 285 | 10 | 28 | 504 | 22 | 463 | 9.26e-55 | 195 |
| MS.gene002696.t1 | AT3G15570 | 33.506 | 385 | 212 | 8 | 209 | 567 | 21 | 387 | 1.01e-54 | 192 |
| MS.gene002696.t1 | AT5G17580 | 29.918 | 488 | 285 | 10 | 28 | 504 | 7 | 448 | 1.50e-54 | 194 |
| MS.gene002696.t1 | AT3G19850 | 28.631 | 482 | 293 | 10 | 36 | 497 | 14 | 464 | 1.52e-54 | 194 |
| MS.gene002696.t1 | AT3G03510 | 29.412 | 510 | 259 | 14 | 82 | 576 | 8 | 431 | 1.83e-53 | 189 |
| MS.gene002696.t1 | AT3G22104 | 29.299 | 471 | 270 | 11 | 22 | 483 | 4 | 420 | 5.65e-52 | 186 |
| MS.gene002696.t1 | AT5G48130 | 26.962 | 497 | 285 | 12 | 19 | 497 | 32 | 468 | 5.96e-48 | 177 |
| MS.gene002696.t1 | AT1G50280 | 28.571 | 476 | 294 | 10 | 35 | 492 | 13 | 460 | 1.34e-47 | 175 |
| MS.gene002696.t1 | AT1G50280 | 28.146 | 437 | 273 | 8 | 70 | 492 | 18 | 427 | 1.08e-45 | 169 |
| MS.gene002696.t1 | AT3G22104 | 28.316 | 392 | 223 | 8 | 100 | 483 | 4 | 345 | 1.62e-36 | 142 |
| MS.gene002696.t1 | AT3G22104 | 28.316 | 392 | 223 | 8 | 100 | 483 | 4 | 345 | 1.62e-36 | 142 |
| MS.gene002696.t1 | AT3G22104 | 28.316 | 392 | 223 | 8 | 100 | 483 | 4 | 345 | 1.62e-36 | 142 |
| MS.gene002696.t1 | AT3G49900 | 35.220 | 159 | 80 | 7 | 20 | 167 | 59 | 205 | 2.02e-11 | 67.0 |
| MS.gene002696.t1 | AT3G49900 | 35.220 | 159 | 80 | 7 | 20 | 167 | 59 | 205 | 2.29e-11 | 67.0 |
Find 125 sgRNAs with CRISPR-Local
Find 183 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGATCTTCTCATTCCGAATA+TGG | 0.185813 | 2.1:-68128722 | MS.gene002696:CDS |
| TCTAAACCTGTCTAAATTTC+AGG | 0.215961 | 2.1:-68128491 | MS.gene002696:CDS |
| TCTCCATGTATAACTGAAAT+TGG | 0.237203 | 2.1:-68128607 | MS.gene002696:CDS |
| AGATTGTATTCAGAGGATTT+TGG | 0.237388 | 2.1:-68128671 | MS.gene002696:CDS |
| GCACGTTTCAAGCGCTTTGA+TGG | 0.261050 | 2.1:+68129314 | None:intergenic |
| TGTTATGAGCTCAAATGTTT+TGG | 0.294973 | 2.1:+68129497 | None:intergenic |
| AACTCCCTCAACTACTTTCA+TGG | 0.296766 | 2.1:+68127364 | None:intergenic |
| TATGGTGCAGATAATCTTAT+TGG | 0.306224 | 2.1:-68129384 | MS.gene002696:CDS |
| TTTGGATTTAGAAGAAAATC+AGG | 0.306365 | 2.1:-68127453 | MS.gene002696:CDS |
| TTCTAGATGCATTGATTCCT+TGG | 0.328608 | 2.1:-68129253 | MS.gene002696:CDS |
| TTCCTTCCAATGATAGCTTT+TGG | 0.329711 | 2.1:+68127778 | None:intergenic |
| CACAGCCTGTTGGTGATAAT+TGG | 0.336858 | 2.1:-68129116 | MS.gene002696:CDS |
| CCTCAACTACTTTCATGGTT+TGG | 0.344002 | 2.1:+68127369 | None:intergenic |
| CCCTCACGACGAAATGCTTC+AGG | 0.350085 | 2.1:+68130503 | None:intergenic |
| CGGATCCAGATTTGTTCAAT+TGG | 0.351033 | 2.1:-68129215 | MS.gene002696:CDS |
| ACTTGAACAATTACTCTTAG+AGG | 0.351406 | 2.1:+68127726 | None:intergenic |
| TTTACATTATTTGATTCATT+AGG | 0.353297 | 2.1:+68127420 | None:intergenic |
| CAATGCATCTAGAAACAATA+TGG | 0.362633 | 2.1:+68129262 | None:intergenic |
| AGGCTTTGATCCCAGCTTCA+TGG | 0.366193 | 2.1:+68130523 | None:intergenic |
| GAAATTGGAACATTAATTGC+TGG | 0.374348 | 2.1:-68128592 | MS.gene002696:CDS |
| GATGTGACACCTCTCTTATT+AGG | 0.375205 | 2.1:+68128859 | None:intergenic |
| CTTGGCTATGAAGGCTTGTT+CGG | 0.381268 | 2.1:-68129235 | MS.gene002696:CDS |
| TCAAGCGCTTTGATGGAATC+TGG | 0.381679 | 2.1:+68129321 | None:intergenic |
| ACTTGCCAATTGAACAAATC+TGG | 0.382711 | 2.1:+68129210 | None:intergenic |
| CATTGATTCCTTGGCTATGA+AGG | 0.384124 | 2.1:-68129244 | MS.gene002696:CDS |
| AATTCAAGGGTTTGTACAAC+AGG | 0.391467 | 2.1:-68130283 | MS.gene002696:intron |
| TCTAAATTCTCTTTGCATGA+TGG | 0.393396 | 2.1:+68128784 | None:intergenic |
| TTACAACTTCATGATGTTCC+TGG | 0.403645 | 2.1:-68129525 | MS.gene002696:CDS |
| GCTGGTAGATAGACATAAAA+TGG | 0.403847 | 2.1:+68128647 | None:intergenic |
| CAAAGAGAATTTAGAGAAAA+GGG | 0.406093 | 2.1:-68128776 | MS.gene002696:CDS |
| TGATCAGCTTCAGAAGTTGT+AGG | 0.408703 | 2.1:+68128916 | None:intergenic |
| GCAAAGAGAATTTAGAGAAA+AGG | 0.413793 | 2.1:-68128777 | MS.gene002696:CDS |
| CGCAATAGATGTATACCTTA+AGG | 0.419410 | 2.1:-68128413 | MS.gene002696:intron |
| TCAAGGGGCCTGGCATAATC+AGG | 0.421029 | 2.1:+68128451 | None:intergenic |
| AGACTTCGCACGTCGATATC+CGG | 0.422476 | 2.1:-68127684 | MS.gene002696:CDS |
| CATCTCTTATATATTACCTT+AGG | 0.423118 | 2.1:-68128999 | MS.gene002696:CDS |
| ATTATTTGATTCATTAGGAT+TGG | 0.433862 | 2.1:+68127425 | None:intergenic |
| CTCCAAATGACTGAAAACTA+TGG | 0.440150 | 2.1:-68129402 | MS.gene002696:CDS |
| TTGCAATTCCTGATTATGCC+AGG | 0.447101 | 2.1:-68128459 | MS.gene002696:CDS |
| TTGTTCAATTGGCAAGTGAC+TGG | 0.447348 | 2.1:-68129204 | MS.gene002696:CDS |
| TGAATCGAAAGGAATGAAAT+CGG | 0.448048 | 2.1:-68129034 | MS.gene002696:CDS |
| AAATGAGTGCTGACCATGTT+TGG | 0.451217 | 2.1:+68130480 | None:intergenic |
| CAACCGAAGGAGATGCTTAG+AGG | 0.452313 | 2.1:+68128837 | None:intergenic |
| AACTTCTGAAGCTGATCAAA+GGG | 0.458152 | 2.1:-68128911 | MS.gene002696:CDS |
| AACCACCAATTATCACCAAC+AGG | 0.459595 | 2.1:+68129111 | None:intergenic |
| GATGACAATGGTCGCTAACT+TGG | 0.461208 | 2.1:-68128551 | MS.gene002696:CDS |
| CACGTAATATCATCGCGGTT+CGG | 0.462601 | 2.1:+68128812 | None:intergenic |
| AAATTGGAACATTAATTGCT+GGG | 0.462617 | 2.1:-68128591 | MS.gene002696:CDS |
| ACTTGATTGTCTATTCATCA+AGG | 0.463780 | 2.1:+68128966 | None:intergenic |
| CTCTTATATATTACCTTAGG+AGG | 0.464964 | 2.1:-68128996 | MS.gene002696:CDS |
| TCGACCGAGTATCCCATATT+CGG | 0.470589 | 2.1:+68128709 | None:intergenic |
| GATCAGCTTCAGAAGTTGTA+GGG | 0.473303 | 2.1:+68128917 | None:intergenic |
| TAACAAAATCAAAGAAAAGT+TGG | 0.474587 | 2.1:-68127494 | MS.gene002696:CDS |
| AGGGCAAATATCGGTCCCTC+AGG | 0.476825 | 2.1:-68127618 | MS.gene002696:CDS |
| TTTCCATTACTTTCTAGAAG+TGG | 0.477836 | 2.1:-68129603 | MS.gene002696:CDS |
| TGTAATGGCATCCATGAAGC+TGG | 0.480977 | 2.1:-68130534 | None:intergenic |
| ACATACATGGCTGACAGATT+CGG | 0.484321 | 2.1:-68127832 | MS.gene002696:CDS |
| TTCAGATACAAAGAACCAAC+CGG | 0.490239 | 2.1:+68127665 | None:intergenic |
| AGTGATGTTACTATTGAAGT+TGG | 0.491007 | 2.1:-68130253 | MS.gene002696:CDS |
| GAATTGCCAAAAGCTATCAT+TGG | 0.494936 | 2.1:-68127784 | MS.gene002696:CDS |
| GATCTTCTCATTCCGAATAT+GGG | 0.495062 | 2.1:-68128721 | MS.gene002696:CDS |
| ATGGTCGCTAACTTGGTAGA+TGG | 0.495307 | 2.1:-68128544 | MS.gene002696:CDS |
| CAAGTGCCTGAAATTTAGAC+AGG | 0.499556 | 2.1:+68128485 | None:intergenic |
| GAGGAACATGAGTTGTTGAA+TGG | 0.502381 | 2.1:-68129159 | MS.gene002696:CDS |
| GTTCCAATTTCAGTTATACA+TGG | 0.505634 | 2.1:+68128604 | None:intergenic |
| CAAAATCCAAGGGCAAATAT+CGG | 0.509120 | 2.1:-68127627 | MS.gene002696:CDS |
| AGCCTGTTGGTGATAATTGG+TGG | 0.510548 | 2.1:-68129113 | MS.gene002696:CDS |
| TATACCGTCGTCAAGGGGCC+TGG | 0.511288 | 2.1:+68128441 | None:intergenic |
| ATGGCTGACAGATTCGGAAC+GGG | 0.514241 | 2.1:-68127826 | MS.gene002696:CDS |
| GAGGGACCGATATTTGCCCT+TGG | 0.518333 | 2.1:+68127621 | None:intergenic |
| TTGAAAACTCACAAAATCCA+AGG | 0.525581 | 2.1:-68127638 | MS.gene002696:CDS |
| GGGTTTACTAGAAGAAATTG+TGG | 0.530266 | 2.1:-68128890 | MS.gene002696:CDS |
| CAACTTCTGAAGCTGATCAA+AGG | 0.539281 | 2.1:-68128912 | MS.gene002696:CDS |
| CAATTATCACCAACAGGCTG+TGG | 0.540795 | 2.1:+68129117 | None:intergenic |
| CATCCTCTAAGCATCTCCTT+CGG | 0.541272 | 2.1:-68128840 | MS.gene002696:CDS |
| CCAAACCATGAAAGTAGTTG+AGG | 0.543035 | 2.1:-68127369 | None:intergenic |
| GCAGAGTCCACAAGTGAGGA+TGG | 0.543325 | 2.1:-68129561 | MS.gene002696:CDS |
| TATACATGGAGAAGCAGATA+AGG | 0.544758 | 2.1:+68128618 | None:intergenic |
| CAAACCATGAAAGTAGTTGA+GGG | 0.548852 | 2.1:-68127368 | None:intergenic |
| CATTCCGAATATGGGATACT+CGG | 0.549415 | 2.1:-68128713 | MS.gene002696:CDS |
| AAGAGAACGTCTATTAGAGT+TGG | 0.549510 | 2.1:-68127556 | MS.gene002696:CDS |
| GGAGAAGCAGATAAGGATGC+AGG | 0.551751 | 2.1:+68128625 | None:intergenic |
| ACTAGACCAGGCTTCACTTG+TGG | 0.556499 | 2.1:-68128743 | MS.gene002696:CDS |
| AGTCCACTTCTAGAAAGTAA+TGG | 0.557324 | 2.1:+68129600 | None:intergenic |
| GTGGTATATACCGTCGTCAA+GGG | 0.566981 | 2.1:+68128435 | None:intergenic |
| GAAGATCCACAAGTGAAGCC+TGG | 0.572388 | 2.1:+68128737 | None:intergenic |
| CTTGATTGTCTATTCATCAA+GGG | 0.575589 | 2.1:+68128967 | None:intergenic |
| GTCATGCAGCACAAAATGAA+AGG | 0.578796 | 2.1:-68127752 | MS.gene002696:CDS |
| TCCCTCAGGGAGTTGTCAAG+TGG | 0.579187 | 2.1:-68127604 | MS.gene002696:CDS |
| GAGAATTTAGAGAAAAGGGT+AGG | 0.579452 | 2.1:-68128772 | MS.gene002696:CDS |
| TGCCAAAAGCTATCATTGGA+AGG | 0.584984 | 2.1:-68127780 | MS.gene002696:CDS |
| TTGGATTTAGAAGAAAATCA+GGG | 0.588050 | 2.1:-68127452 | MS.gene002696:CDS |
| GCCTGAAGCATTTCGTCGTG+AGG | 0.588579 | 2.1:-68130504 | MS.gene002696:CDS |
| CAACTTCATGATGTTCCTGG+TGG | 0.592072 | 2.1:-68129522 | MS.gene002696:CDS |
| ACTTCAATAGTAACATCACT+TGG | 0.592157 | 2.1:+68130256 | None:intergenic |
| ACTTGATCCATCCTCACTTG+TGG | 0.592828 | 2.1:+68129554 | None:intergenic |
| TCAAGGGAAGAAACCTCCTA+AGG | 0.594510 | 2.1:+68128983 | None:intergenic |
| GGTAGGAGCTCAACTAGACC+AGG | 0.597267 | 2.1:-68128755 | MS.gene002696:CDS |
| AAGCAGATAAGGATGCAGGC+TGG | 0.598744 | 2.1:+68128629 | None:intergenic |
| ATGATATAGATTGTATTCAG+AGG | 0.601793 | 2.1:-68128678 | MS.gene002696:CDS |
| GTAATGGCATCCATGAAGCT+GGG | 0.602173 | 2.1:-68130533 | MS.gene002696:CDS |
| TCCACTTGACAACTCCCTGA+GGG | 0.607481 | 2.1:+68127603 | None:intergenic |
| TCGCGGTTCGGAGCAACCGA+AGG | 0.609645 | 2.1:+68128824 | None:intergenic |
| CCTGAAGCATTTCGTCGTGA+GGG | 0.613504 | 2.1:-68130503 | MS.gene002696:CDS |
| TACGTTGACACCGATGACAA+TGG | 0.615680 | 2.1:-68128563 | MS.gene002696:CDS |
| CGTGGTATATACCGTCGTCA+AGG | 0.618223 | 2.1:+68128434 | None:intergenic |
| CGAACAAGCCTTCATAGCCA+AGG | 0.624649 | 2.1:+68129236 | None:intergenic |
| TTCGTCGTGAGGGCCAAACA+TGG | 0.625414 | 2.1:-68130493 | MS.gene002696:intron |
| TTCGCACGTCGATATCCGGT+TGG | 0.629496 | 2.1:-68127680 | MS.gene002696:CDS |
| CATGGCTGACAGATTCGGAA+CGG | 0.631652 | 2.1:-68127827 | MS.gene002696:CDS |
| TGAAAACTCACAAAATCCAA+GGG | 0.635633 | 2.1:-68127637 | MS.gene002696:CDS |
| AAGTTAGCGACCATTGTCAT+CGG | 0.635927 | 2.1:+68128553 | None:intergenic |
| TGGTATATACCGTCGTCAAG+GGG | 0.643375 | 2.1:+68128436 | None:intergenic |
| GGGCAAATATCGGTCCCTCA+GGG | 0.648762 | 2.1:-68127617 | MS.gene002696:CDS |
| TATGCCAGGCCCCTTGACGA+CGG | 0.651135 | 2.1:-68128445 | MS.gene002696:CDS |
| AATTGCAGAGTCCACAAGTG+AGG | 0.652804 | 2.1:-68129565 | MS.gene002696:CDS |
| GAGTTGATTCCTAATAAGAG+AGG | 0.668136 | 2.1:-68128868 | MS.gene002696:CDS |
| AATACAAAAGTACCTTGTGG+AGG | 0.673725 | 2.1:+68130215 | None:intergenic |
| AATTGGAACATTAATTGCTG+GGG | 0.676903 | 2.1:-68128590 | MS.gene002696:CDS |
| ATCCACTTGACAACTCCCTG+AGG | 0.676982 | 2.1:+68127602 | None:intergenic |
| TAAGGTATACATCTATTGCG+TGG | 0.691492 | 2.1:+68128416 | None:intergenic |
| ACTTCTGAAGCTGATCAAAG+GGG | 0.700182 | 2.1:-68128910 | MS.gene002696:CDS |
| CAAAGCGCTTGAAACGTGCG+AGG | 0.701306 | 2.1:-68129310 | MS.gene002696:CDS |
| GAAAGTAAACCACAGCCTGT+TGG | 0.711849 | 2.1:-68129126 | MS.gene002696:CDS |
| ACTTGCACGTAATATCATCG+CGG | 0.804434 | 2.1:+68128807 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTTAATTATAAATGC+TGG | + | chr2.1:68128189-68128208 | None:intergenic | 10.0% |
| !!! | AAAATCAATCTTTTATATAA+TGG | + | chr2.1:68128841-68128860 | None:intergenic | 10.0% |
| !! | AAAACTTAAATCATAAACAA+TGG | - | chr2.1:68127819-68127838 | MS.gene002696:CDS | 15.0% |
| !! | AGTTCATATAAAAAAATTAC+TGG | + | chr2.1:68129541-68129560 | None:intergenic | 15.0% |
| !! | CACATATTATATAAGATATA+AGG | + | chr2.1:68127465-68127484 | None:intergenic | 15.0% |
| !! | TTTACATTATTTGATTCATT+AGG | + | chr2.1:68130484-68130503 | None:intergenic | 15.0% |
| !!! | AATTAAATTTTTGTCTTTGT+TGG | - | chr2.1:68128197-68128216 | MS.gene002696:intron | 15.0% |
| !!! | TAATCTGTGATTTTTATTTA+GGG | + | chr2.1:68129697-68129716 | None:intergenic | 15.0% |
| !!! | TTAATCTGTGATTTTTATTT+AGG | + | chr2.1:68129698-68129717 | None:intergenic | 15.0% |
| !! | AAAATGTAACAAAAAACTTC+AGG | - | chr2.1:68130045-68130064 | MS.gene002696:intron | 20.0% |
| !! | ATAAACTAACAAAGTATGTT+TGG | - | chr2.1:68129931-68129950 | MS.gene002696:intron | 20.0% |
| !! | ATTATTTGATTCATTAGGAT+TGG | + | chr2.1:68130479-68130498 | None:intergenic | 20.0% |
| !! | GAACTTTAGTACTATATATA+CGG | + | chr2.1:68127947-68127966 | None:intergenic | 20.0% |
| !! | TAACAAAATCAAAGAAAAGT+TGG | - | chr2.1:68130407-68130426 | MS.gene002696:intron | 20.0% |
| !!! | ATGATCTTGTTTTAATTCAA+GGG | - | chr2.1:68127605-68127624 | MS.gene002696:CDS | 20.0% |
| !!! | TGTTACATTTTGAAATGATT+AGG | + | chr2.1:68130036-68130055 | None:intergenic | 20.0% |
| !!! | TTAAAGTATCTAATTCATGT+TGG | - | chr2.1:68128238-68128257 | MS.gene002696:intron | 20.0% |
| !!! | TTGTTCTAATAATTAACTTG+AGG | + | chr2.1:68127776-68127795 | None:intergenic | 20.0% |
| ! | AAAAAATTACTGGCAAAGAA+AGG | + | chr2.1:68129531-68129550 | None:intergenic | 25.0% |
| ! | AAATTGGAACATTAATTGCT+GGG | - | chr2.1:68129310-68129329 | MS.gene002696:CDS | 25.0% |
| ! | AGAAACATCTATACATAGAA+GGG | - | chr2.1:68129827-68129846 | MS.gene002696:intron | 25.0% |
| ! | ATGATATAGATTGTATTCAG+AGG | - | chr2.1:68129223-68129242 | MS.gene002696:CDS | 25.0% |
| ! | ATGGTTATAATAAGAAGAAG+AGG | - | chr2.1:68129901-68129920 | MS.gene002696:intron | 25.0% |
| ! | CAAAGAGAATTTAGAGAAAA+GGG | - | chr2.1:68129125-68129144 | MS.gene002696:CDS | 25.0% |
| ! | CATCTCTTATATATTACCTT+AGG | - | chr2.1:68128902-68128921 | MS.gene002696:CDS | 25.0% |
| ! | CTTGAATTAAAACAAGATCA+TGG | + | chr2.1:68127606-68127625 | None:intergenic | 25.0% |
| ! | TAGAAACATCTATACATAGA+AGG | - | chr2.1:68129826-68129845 | MS.gene002696:intron | 25.0% |
| ! | TATGTACAAATTGCAAAACA+TGG | - | chr2.1:68129882-68129901 | MS.gene002696:intron | 25.0% |
| ! | TTGGATTTAGAAGAAAATCA+GGG | - | chr2.1:68130449-68130468 | MS.gene002696:intron | 25.0% |
| ! | TTTGGATTTAGAAGAAAATC+AGG | - | chr2.1:68130448-68130467 | MS.gene002696:intron | 25.0% |
| !! | AGCATTTTTCCAAAAAGATT+TGG | - | chr2.1:68130430-68130449 | MS.gene002696:intron | 25.0% |
| !! | CTTCTAAATCCAAATCTTTT+TGG | + | chr2.1:68130442-68130461 | None:intergenic | 25.0% |
| !! | TAAATGAAGTTTTCAGCAAT+TGG | - | chr2.1:68128557-68128576 | MS.gene002696:CDS | 25.0% |
| !! | TCAATCTTTTATATAATGGC+AGG | + | chr2.1:68128837-68128856 | None:intergenic | 25.0% |
| !!! | ATTTTAGCTATTGAATCGAA+AGG | - | chr2.1:68128856-68128875 | MS.gene002696:CDS | 25.0% |
| !!! | CATGATCTTGTTTTAATTCA+AGG | - | chr2.1:68127604-68127623 | MS.gene002696:CDS | 25.0% |
| !!! | TTAAATACAAAAGTACCTTG+TGG | + | chr2.1:68127692-68127711 | None:intergenic | 25.0% |
| !!! | TTAAGGTTCTATTTTGACAT+AGG | + | chr2.1:68127529-68127548 | None:intergenic | 25.0% |
| !!! | TTTTTTTGGATAGTGAGAAT+AGG | - | chr2.1:68127560-68127579 | MS.gene002696:CDS | 25.0% |
| AATTGGAACATTAATTGCTG+GGG | - | chr2.1:68129311-68129330 | MS.gene002696:CDS | 30.0% | |
| ACTTCAATAGTAACATCACT+TGG | + | chr2.1:68127648-68127667 | None:intergenic | 30.0% | |
| ACTTGAACAATTACTCTTAG+AGG | + | chr2.1:68130178-68130197 | None:intergenic | 30.0% | |
| ACTTGATTGTCTATTCATCA+AGG | + | chr2.1:68128938-68128957 | None:intergenic | 30.0% | |
| AGTACATGATTGTGATTTCA+TGG | + | chr2.1:68129983-68130002 | None:intergenic | 30.0% | |
| AGTGATGTTACTATTGAAGT+TGG | - | chr2.1:68127648-68127667 | MS.gene002696:CDS | 30.0% | |
| CAATGCATCTAGAAACAATA+TGG | + | chr2.1:68128642-68128661 | None:intergenic | 30.0% | |
| CATGGTACTAAATTTGTGAA+AGG | + | chr2.1:68129965-68129984 | None:intergenic | 30.0% | |
| CTCTTATATATTACCTTAGG+AGG | - | chr2.1:68128905-68128924 | MS.gene002696:CDS | 30.0% | |
| CTTGATTGTCTATTCATCAA+GGG | + | chr2.1:68128937-68128956 | None:intergenic | 30.0% | |
| GAAATTGGAACATTAATTGC+TGG | - | chr2.1:68129309-68129328 | MS.gene002696:CDS | 30.0% | |
| GCAAAGAGAATTTAGAGAAA+AGG | - | chr2.1:68129124-68129143 | MS.gene002696:CDS | 30.0% | |
| GTTCCAATTTCAGTTATACA+TGG | + | chr2.1:68129300-68129319 | None:intergenic | 30.0% | |
| TAATGATGCGAAAAATCAAG+AGG | - | chr2.1:68128723-68128742 | MS.gene002696:CDS | 30.0% | |
| TACAAGATGATCTAACCTTA+AGG | + | chr2.1:68129506-68129525 | None:intergenic | 30.0% | |
| TATGGTGCAGATAATCTTAT+TGG | - | chr2.1:68128517-68128536 | MS.gene002696:CDS | 30.0% | |
| TCTAAACCTGTCTAAATTTC+AGG | - | chr2.1:68129410-68129429 | MS.gene002696:CDS | 30.0% | |
| TCTAAATTCTCTTTGCATGA+TGG | + | chr2.1:68129120-68129139 | None:intergenic | 30.0% | |
| TCTCCATGTATAACTGAAAT+TGG | - | chr2.1:68129294-68129313 | MS.gene002696:CDS | 30.0% | |
| TGAAAACTCACAAAATCCAA+GGG | - | chr2.1:68130264-68130283 | MS.gene002696:CDS | 30.0% | |
| TGAATCGAAAGGAATGAAAT+CGG | - | chr2.1:68128867-68128886 | MS.gene002696:CDS | 30.0% | |
| TTGAAAACTCACAAAATCCA+AGG | - | chr2.1:68130263-68130282 | MS.gene002696:CDS | 30.0% | |
| ! | AGATTGTATTCAGAGGATTT+TGG | - | chr2.1:68129230-68129249 | MS.gene002696:CDS | 30.0% |
| ! | CTCATAACAAAGTTTTGCTA+TGG | - | chr2.1:68128418-68128437 | MS.gene002696:CDS | 30.0% |
| ! | CTTGATTTTTCGCATCATTA+CGG | + | chr2.1:68128723-68128742 | None:intergenic | 30.0% |
| ! | TGTTATGAGCTCAAATGTTT+TGG | + | chr2.1:68128407-68128426 | None:intergenic | 30.0% |
| ! | TTCAAGGTTGTAAGATGTTT+TGG | - | chr2.1:68129573-68129592 | MS.gene002696:CDS | 30.0% |
| ! | TTTCCATTACTTTCTAGAAG+TGG | - | chr2.1:68128298-68128317 | MS.gene002696:intron | 30.0% |
| AAAAACTTCAGGCACATACA+TGG | - | chr2.1:68130056-68130075 | MS.gene002696:intron | 35.0% | |
| AACATGGCTCATATATAGAG+GGG | + | chr2.1:68128023-68128042 | None:intergenic | 35.0% | |
| AACTCCTTTCTTATGCTTCA+AGG | - | chr2.1:68129557-68129576 | MS.gene002696:CDS | 35.0% | |
| AAGAGAACGTCTATTAGAGT+TGG | - | chr2.1:68130345-68130364 | MS.gene002696:intron | 35.0% | |
| AATTCAAGGGTTTGTACAAC+AGG | - | chr2.1:68127618-68127637 | MS.gene002696:CDS | 35.0% | |
| AATTGCACCCACTAATTCAT+TGG | + | chr2.1:68128081-68128100 | None:intergenic | 35.0% | |
| ACAACCTTGAAGCATAAGAA+AGG | + | chr2.1:68129564-68129583 | None:intergenic | 35.0% | |
| ACAATACCAATGAACCGTAT+CGG | - | chr2.1:68127975-68127994 | MS.gene002696:intron | 35.0% | |
| ACGAAATTATAGTCACAGAG+AGG | + | chr2.1:68127886-68127905 | None:intergenic | 35.0% | |
| ACTTGCCAATTGAACAAATC+TGG | + | chr2.1:68128694-68128713 | None:intergenic | 35.0% | |
| ATTGCACCCACTAATTCATT+GGG | + | chr2.1:68128080-68128099 | None:intergenic | 35.0% | |
| ATTTGTGATGATTTCGATGC+TGG | - | chr2.1:68129647-68129666 | MS.gene002696:intron | 35.0% | |
| CAAAATCCAAGGGCAAATAT+CGG | - | chr2.1:68130274-68130293 | MS.gene002696:CDS | 35.0% | |
| CGCAATAGATGTATACCTTA+AGG | - | chr2.1:68129488-68129507 | MS.gene002696:CDS | 35.0% | |
| CTCCAAATGACTGAAAACTA+TGG | - | chr2.1:68128499-68128518 | MS.gene002696:CDS | 35.0% | |
| GAACATGGCTCATATATAGA+GGG | + | chr2.1:68128024-68128043 | None:intergenic | 35.0% | |
| GAATTGCCAAAAGCTATCAT+TGG | - | chr2.1:68130117-68130136 | MS.gene002696:intron | 35.0% | |
| GAGAATTTAGAGAAAAGGGT+AGG | - | chr2.1:68129129-68129148 | MS.gene002696:CDS | 35.0% | |
| GATCGTTTGTTTACGTAGTT+CGG | - | chr2.1:68127847-68127866 | MS.gene002696:intron | 35.0% | |
| GATCTTCTCATTCCGAATAT+GGG | - | chr2.1:68129180-68129199 | MS.gene002696:CDS | 35.0% | |
| GATGTACATCATGTTGAACA+TGG | + | chr2.1:68128039-68128058 | None:intergenic | 35.0% | |
| GCTGGTAGATAGACATAAAA+TGG | + | chr2.1:68129257-68129276 | None:intergenic | 35.0% | |
| GGGTTTACTAGAAGAAATTG+TGG | - | chr2.1:68129011-68129030 | MS.gene002696:CDS | 35.0% | |
| TAAGGTATACATCTATTGCG+TGG | + | chr2.1:68129488-68129507 | None:intergenic | 35.0% | |
| TATACATGGAGAAGCAGATA+AGG | + | chr2.1:68129286-68129305 | None:intergenic | 35.0% | |
| TGAACATGGCTCATATATAG+AGG | + | chr2.1:68128025-68128044 | None:intergenic | 35.0% | |
| TTACAACTTCATGATGTTCC+TGG | - | chr2.1:68128376-68128395 | MS.gene002696:intron | 35.0% | |
| TTCAGATACAAAGAACCAAC+CGG | + | chr2.1:68130239-68130258 | None:intergenic | 35.0% | |
| TTTACGAAGAACTAAGATCG+TGG | - | chr2.1:68129611-68129630 | MS.gene002696:intron | 35.0% | |
| ! | AATTTCTTTTCTCCTCCACA+AGG | - | chr2.1:68127674-68127693 | MS.gene002696:CDS | 35.0% |
| ! | AGTCCACTTCTAGAAAGTAA+TGG | + | chr2.1:68128304-68128323 | None:intergenic | 35.0% |
| ! | CACCATAGTTTTCAGTCATT+TGG | + | chr2.1:68128504-68128523 | None:intergenic | 35.0% |
| ! | GAGTTGATTCCTAATAAGAG+AGG | - | chr2.1:68129033-68129052 | MS.gene002696:CDS | 35.0% |
| ! | TTCCTTCCAATGATAGCTTT+TGG | + | chr2.1:68130126-68130145 | None:intergenic | 35.0% |
| !! | AACTTCTGAAGCTGATCAAA+GGG | - | chr2.1:68128990-68129009 | MS.gene002696:CDS | 35.0% |
| !! | AATACAAAAGTACCTTGTGG+AGG | + | chr2.1:68127689-68127708 | None:intergenic | 35.0% |
| !! | TTCTAGATGCATTGATTCCT+TGG | - | chr2.1:68128648-68128667 | MS.gene002696:CDS | 35.0% |
| AACCACCAATTATCACCAAC+AGG | + | chr2.1:68128793-68128812 | None:intergenic | 40.0% | |
| AAGTTAGCGACCATTGTCAT+CGG | + | chr2.1:68129351-68129370 | None:intergenic | 40.0% | |
| ACATACATGGCTGACAGATT+CGG | - | chr2.1:68130069-68130088 | MS.gene002696:intron | 40.0% | |
| ACTTGCACGTAATATCATCG+CGG | + | chr2.1:68129097-68129116 | None:intergenic | 40.0% | |
| CAAGTGCCTGAAATTTAGAC+AGG | + | chr2.1:68129419-68129438 | None:intergenic | 40.0% | |
| CATTCCGAATATGGGATACT+CGG | - | chr2.1:68129188-68129207 | MS.gene002696:CDS | 40.0% | |
| GAGGAACATGAGTTGTTGAA+TGG | - | chr2.1:68128742-68128761 | MS.gene002696:CDS | 40.0% | |
| GATCAGCTTCAGAAGTTGTA+GGG | + | chr2.1:68128987-68129006 | None:intergenic | 40.0% | |
| GATGTGACACCTCTCTTATT+AGG | + | chr2.1:68129045-68129064 | None:intergenic | 40.0% | |
| GCGATACCCAATGAATTAGT+GGG | - | chr2.1:68128071-68128090 | MS.gene002696:intron | 40.0% | |
| GGATCTTCTCATTCCGAATA+TGG | - | chr2.1:68129179-68129198 | MS.gene002696:CDS | 40.0% | |
| GTCATGCAGCACAAAATGAA+AGG | - | chr2.1:68130149-68130168 | MS.gene002696:intron | 40.0% | |
| GTCTAAGCTGCTCGAAAAAT+AGG | + | chr2.1:68130201-68130220 | None:intergenic | 40.0% | |
| TGATCAGCTTCAGAAGTTGT+AGG | + | chr2.1:68128988-68129007 | None:intergenic | 40.0% | |
| TGCCAAAAGCTATCATTGGA+AGG | - | chr2.1:68130121-68130140 | MS.gene002696:intron | 40.0% | |
| TGCGATACCCAATGAATTAG+TGG | - | chr2.1:68128070-68128089 | MS.gene002696:intron | 40.0% | |
| TTGCAATTCCTGATTATGCC+AGG | - | chr2.1:68129442-68129461 | MS.gene002696:CDS | 40.0% | |
| TTGTTCAATTGGCAAGTGAC+TGG | - | chr2.1:68128697-68128716 | MS.gene002696:CDS | 40.0% | |
| ! | CGGATCCAGATTTGTTCAAT+TGG | - | chr2.1:68128686-68128705 | MS.gene002696:CDS | 40.0% |
| !! | AAATGAGTGCTGACCATGTT+TGG | + | chr2.1:68127424-68127443 | None:intergenic | 40.0% |
| !! | ACTTCTGAAGCTGATCAAAG+GGG | - | chr2.1:68128991-68129010 | MS.gene002696:CDS | 40.0% |
| !! | CAACTTCTGAAGCTGATCAA+AGG | - | chr2.1:68128989-68129008 | MS.gene002696:CDS | 40.0% |
| !! | CATTGATTCCTTGGCTATGA+AGG | - | chr2.1:68128657-68128676 | MS.gene002696:CDS | 40.0% |
| AATTGCAGAGTCCACAAGTG+AGG | - | chr2.1:68128336-68128355 | MS.gene002696:intron | 45.0% | |
| ACGAAGAACTAAGATCGTGG+AGG | - | chr2.1:68129614-68129633 | MS.gene002696:intron | 45.0% | |
| ACTTGATCCATCCTCACTTG+TGG | + | chr2.1:68128350-68128369 | None:intergenic | 45.0% | |
| ATACCAATGAACCGTATCGG+AGG | - | chr2.1:68127978-68127997 | MS.gene002696:intron | 45.0% | |
| ATGGTCGCTAACTTGGTAGA+TGG | - | chr2.1:68129357-68129376 | MS.gene002696:CDS | 45.0% | |
| CAACTTCATGATGTTCCTGG+TGG | - | chr2.1:68128379-68128398 | MS.gene002696:intron | 45.0% | |
| CAATTATCACCAACAGGCTG+TGG | + | chr2.1:68128787-68128806 | None:intergenic | 45.0% | |
| CACGTAATATCATCGCGGTT+CGG | + | chr2.1:68129092-68129111 | None:intergenic | 45.0% | |
| CATCCTCTAAGCATCTCCTT+CGG | - | chr2.1:68129061-68129080 | MS.gene002696:CDS | 45.0% | |
| GAAAGTAAACCACAGCCTGT+TGG | - | chr2.1:68128775-68128794 | MS.gene002696:CDS | 45.0% | |
| GATGACAATGGTCGCTAACT+TGG | - | chr2.1:68129350-68129369 | MS.gene002696:CDS | 45.0% | |
| GTGGTATATACCGTCGTCAA+GGG | + | chr2.1:68129469-68129488 | None:intergenic | 45.0% | |
| TACCAATGAACCGTATCGGA+GGG | - | chr2.1:68127979-68127998 | MS.gene002696:intron | 45.0% | |
| TACGTTGACACCGATGACAA+TGG | - | chr2.1:68129338-68129357 | MS.gene002696:CDS | 45.0% | |
| TCAAGCGCTTTGATGGAATC+TGG | + | chr2.1:68128583-68128602 | None:intergenic | 45.0% | |
| TCAAGGGAAGAAACCTCCTA+AGG | + | chr2.1:68128921-68128940 | None:intergenic | 45.0% | |
| TCGACCGAGTATCCCATATT+CGG | + | chr2.1:68129195-68129214 | None:intergenic | 45.0% | |
| TGGTATATACCGTCGTCAAG+GGG | + | chr2.1:68129468-68129487 | None:intergenic | 45.0% | |
| ! | CTTGGCTATGAAGGCTTGTT+CGG | - | chr2.1:68128666-68128685 | MS.gene002696:CDS | 45.0% |
| !! | AGCCTGTTGGTGATAATTGG+TGG | - | chr2.1:68128788-68128807 | MS.gene002696:CDS | 45.0% |
| !! | CACAGCCTGTTGGTGATAAT+TGG | - | chr2.1:68128785-68128804 | MS.gene002696:CDS | 45.0% |
| !!! | TCAAATGTTTTGGCTCCACC+AGG | + | chr2.1:68128397-68128416 | None:intergenic | 45.0% |
| !! | AAAAAATAAAATGAAATTTA+AGG | + | chr2.1:68127546-68127565 | None:intergenic | 5.0% |
| !!! | TAAATTTCATTTTATTTTTT+TGG | - | chr2.1:68127546-68127565 | MS.gene002696:CDS | 5.0% |
| AAGCAGATAAGGATGCAGGC+TGG | + | chr2.1:68129275-68129294 | None:intergenic | 50.0% | |
| ACTAGACCAGGCTTCACTTG+TGG | - | chr2.1:68129158-68129177 | MS.gene002696:CDS | 50.0% | |
| AGACTTCGCACGTCGATATC+CGG | - | chr2.1:68130217-68130236 | MS.gene002696:intron | 50.0% | |
| ATCCACTTGACAACTCCCTG+AGG | + | chr2.1:68130302-68130321 | None:intergenic | 50.0% | |
| ATGGCTGACAGATTCGGAAC+GGG | - | chr2.1:68130075-68130094 | MS.gene002696:intron | 50.0% | |
| CAACCGAAGGAGATGCTTAG+AGG | + | chr2.1:68129067-68129086 | None:intergenic | 50.0% | |
| CATGGCTGACAGATTCGGAA+CGG | - | chr2.1:68130074-68130093 | MS.gene002696:intron | 50.0% | |
| CGAACAAGCCTTCATAGCCA+AGG | + | chr2.1:68128668-68128687 | None:intergenic | 50.0% | |
| CGTGGTATATACCGTCGTCA+AGG | + | chr2.1:68129470-68129489 | None:intergenic | 50.0% | |
| GAAGATCCACAAGTGAAGCC+TGG | + | chr2.1:68129167-68129186 | None:intergenic | 50.0% | |
| GCACGTTTCAAGCGCTTTGA+TGG | + | chr2.1:68128590-68128609 | None:intergenic | 50.0% | |
| GGAGAAGCAGATAAGGATGC+AGG | + | chr2.1:68129279-68129298 | None:intergenic | 50.0% | |
| TAACGTAGCTCCCTCCGATA+CGG | + | chr2.1:68127992-68128011 | None:intergenic | 50.0% | |
| TCCACTTGACAACTCCCTGA+GGG | + | chr2.1:68130301-68130320 | None:intergenic | 50.0% | |
| ! | AGGCTTTGATCCCAGCTTCA+TGG | + | chr2.1:68127381-68127400 | None:intergenic | 50.0% |
| ! | CCTGAAGCATTTCGTCGTGA+GGG | - | chr2.1:68127398-68127417 | MS.gene002696:CDS | 50.0% |
| AGGGCAAATATCGGTCCCTC+AGG | - | chr2.1:68130283-68130302 | MS.gene002696:intron | 55.0% | |
| CCCTCACGACGAAATGCTTC+AGG | + | chr2.1:68127401-68127420 | None:intergenic | 55.0% | |
| CTCCCTCCGATACGGTTCAT+TGG | + | chr2.1:68127984-68128003 | None:intergenic | 55.0% | |
| GAGGGACCGATATTTGCCCT+TGG | + | chr2.1:68130283-68130302 | None:intergenic | 55.0% | |
| GCAGAGTCCACAAGTGAGGA+TGG | - | chr2.1:68128340-68128359 | MS.gene002696:intron | 55.0% | |
| GGGCAAATATCGGTCCCTCA+GGG | - | chr2.1:68130284-68130303 | MS.gene002696:intron | 55.0% | |
| GGTAGGAGCTCAACTAGACC+AGG | - | chr2.1:68129146-68129165 | MS.gene002696:CDS | 55.0% | |
| TCAAGGGGCCTGGCATAATC+AGG | + | chr2.1:68129453-68129472 | None:intergenic | 55.0% | |
| TCCCTCAGGGAGTTGTCAAG+TGG | - | chr2.1:68130297-68130316 | MS.gene002696:intron | 55.0% | |
| TTCGCACGTCGATATCCGGT+TGG | - | chr2.1:68130221-68130240 | MS.gene002696:intron | 55.0% | |
| TTCGTCGTGAGGGCCAAACA+TGG | - | chr2.1:68127408-68127427 | MS.gene002696:CDS | 55.0% | |
| ! | CAAAGCGCTTGAAACGTGCG+AGG | - | chr2.1:68128591-68128610 | MS.gene002696:CDS | 55.0% |
| ! | GCCTGAAGCATTTCGTCGTG+AGG | - | chr2.1:68127397-68127416 | MS.gene002696:CDS | 55.0% |
| TATACCGTCGTCAAGGGGCC+TGG | + | chr2.1:68129463-68129482 | None:intergenic | 60.0% | |
| TATGCCAGGCCCCTTGACGA+CGG | - | chr2.1:68129456-68129475 | MS.gene002696:CDS | 60.0% | |
| ! | TCGCGGTTCGGAGCAACCGA+AGG | + | chr2.1:68129080-68129099 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 68127371 | 68130552 | 68127371 | ID=MS.gene002696 |
| chr2.1 | mRNA | 68127371 | 68130552 | 68127371 | ID=MS.gene002696.t1;Parent=MS.gene002696 |
| chr2.1 | exon | 68130494 | 68130552 | 68130494 | ID=MS.gene002696.t1.exon1;Parent=MS.gene002696.t1 |
| chr2.1 | CDS | 68130494 | 68130552 | 68130494 | ID=cds.MS.gene002696.t1;Parent=MS.gene002696.t1 |
| chr2.1 | exon | 68130228 | 68130297 | 68130228 | ID=MS.gene002696.t1.exon2;Parent=MS.gene002696.t1 |
| chr2.1 | CDS | 68130228 | 68130297 | 68130228 | ID=cds.MS.gene002696.t1;Parent=MS.gene002696.t1 |
| chr2.1 | exon | 68128414 | 68129625 | 68128414 | ID=MS.gene002696.t1.exon3;Parent=MS.gene002696.t1 |
| chr2.1 | CDS | 68128414 | 68129625 | 68128414 | ID=cds.MS.gene002696.t1;Parent=MS.gene002696.t1 |
| chr2.1 | exon | 68127371 | 68127856 | 68127371 | ID=MS.gene002696.t1.exon4;Parent=MS.gene002696.t1 |
| chr2.1 | CDS | 68127371 | 68127856 | 68127371 | ID=cds.MS.gene002696.t1;Parent=MS.gene002696.t1 |
| Gene Sequence |
| Protein sequence |
