AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene002901

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002901.t1 MTR_2g022600 95.608 296 13 0 24 319 24 319 0.0 580
MS.gene002901.t1 MTR_3g098750 86.943 314 14 5 21 321 142 441 0.0 531
MS.gene002901.t1 MTR_0103s0010 83.117 77 13 0 243 319 1 77 1.58e-37 132
MS.gene002901.t1 MTR_6g009130 83.117 77 13 0 243 319 1 77 3.70e-37 133
MS.gene002901.t1 MTR_7g080410 31.557 244 140 8 22 245 27 263 3.82e-17 81.6
MS.gene002901.t1 MTR_7g080410 31.557 244 140 8 22 245 27 263 6.28e-17 80.9
MS.gene002901.t1 MTR_8g096620 30.180 222 132 7 33 247 45 250 6.43e-16 78.6
MS.gene002901.t1 MTR_1196s0010 33.816 207 122 7 22 221 262 460 9.74e-14 72.8
MS.gene002901.t1 MTR_3g085740 33.333 183 111 5 38 214 80 257 4.85e-13 69.7
MS.gene002901.t1 MTR_3g087850 32.418 182 109 5 38 214 31 203 3.55e-12 67.0
MS.gene002901.t1 MTR_8g096580 28.070 228 143 7 9 226 17 233 1.92e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene002901.t1 AT3G06060 70.033 307 91 1 5 310 8 314 3.98e-154 437
MS.gene002901.t1 AT3G06060 70.033 307 91 1 5 310 25 331 6.16e-154 437
MS.gene002901.t1 AT5G19200 64.646 297 105 0 16 312 18 314 2.13e-141 405
MS.gene002901.t1 AT3G47350 28.085 235 148 7 33 259 44 265 1.37e-17 83.2
MS.gene002901.t1 AT3G47360 27.692 260 167 7 9 260 21 267 1.69e-16 79.7
MS.gene002901.t1 AT5G50690 27.758 281 164 9 8 264 8 273 2.60e-16 79.3
MS.gene002901.t1 AT5G50590 27.758 281 164 9 8 264 8 273 2.60e-16 79.3
MS.gene002901.t1 AT3G47350 27.586 232 149 7 33 259 44 261 4.78e-16 78.6
MS.gene002901.t1 AT5G50600 30.729 192 117 5 38 224 50 230 2.47e-15 77.0
MS.gene002901.t1 AT5G50700 30.729 192 117 5 38 224 50 230 2.47e-15 77.0
MS.gene002901.t1 AT2G29360 28.139 231 153 5 25 250 11 233 3.27e-15 75.5
MS.gene002901.t1 AT5G50690 29.756 205 128 5 33 232 45 238 4.29e-15 74.7
MS.gene002901.t1 AT5G50590 29.756 205 128 5 33 232 45 238 4.29e-15 74.7
MS.gene002901.t1 AT3G03330 30.000 240 133 8 33 245 41 272 1.38e-13 71.6
MS.gene002901.t1 AT5G65205 33.516 182 107 5 38 214 11 183 2.57e-13 70.1
MS.gene002901.t1 AT2G29370 28.218 202 135 4 24 220 8 204 3.28e-12 66.6
MS.gene002901.t1 AT2G29150 31.016 187 119 4 39 220 22 203 3.47e-12 66.6
MS.gene002901.t1 AT2G29350 29.412 187 123 3 39 220 21 203 1.06e-11 64.7
MS.gene002901.t1 AT2G29350 29.412 187 123 3 39 220 21 203 3.90e-11 63.5
MS.gene002901.t1 AT1G10310 30.058 173 111 4 36 203 18 185 6.75e-11 62.4

Find 94 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTATTCGGCCAGTAAATT+TGG 0.214786 2.1:-65667427 MS.gene002901:CDS
AGAAGAGGCTGCAATGATTT+TGG 0.223794 2.1:+65666814 None:intergenic
TGCGTTGGAATTGGAGAAAA+TGG 0.239743 2.1:-65669094 MS.gene002901:CDS
GGAGTTTAGGTGGGAATTTA+TGG 0.245092 2.1:-65667457 MS.gene002901:intron
CGGCGGCGGCGCGATGGGCG+AGG 0.245869 2.1:+65669307 None:intergenic
CCCTCAGAGGTCATTCTTAA+TGG 0.249957 2.1:-65666672 MS.gene002901:CDS
TTATGGTTATGTAGCTTATT+CGG 0.295839 2.1:-65667440 MS.gene002901:CDS
CACCATCGGCGGCGGCGCGA+TGG 0.300567 2.1:+65669301 None:intergenic
ACCACGGAGGCCAAATTTAC+TGG 0.301992 2.1:+65667417 None:intergenic
GTTGGTGATTGGGATCTTGA+TGG 0.326089 2.1:+65669374 None:intergenic
CGGCGCGATGGGCGAGGGCG+AGG 0.327956 2.1:+65669313 None:intergenic
TACGATTGATGTTAATTTGA+TGG 0.335633 2.1:-65669052 MS.gene002901:CDS
GGAGGAGGAGGAGAGGGAGG+AGG 0.340474 2.1:+65669427 None:intergenic
AAAATCATTGCAGCCTCTTC+TGG 0.342665 2.1:-65666812 MS.gene002901:CDS
GCGTTATCCCTAGCAACTTC+AGG 0.363331 2.1:-65666701 MS.gene002901:CDS
GGCGGCGGCGCGATGGGCGA+GGG 0.367664 2.1:+65669308 None:intergenic
GCCCATCGCGCCGCCGCCGA+TGG 0.370837 2.1:-65669303 MS.gene002901:CDS
CACTATGTTTCCAGTGGAAC+TGG 0.390366 2.1:-65666607 MS.gene002901:intron
CTTTGCCTCAAATGAAGAAT+AGG 0.390871 2.1:-65669005 MS.gene002901:CDS
TTTGTTGAGGTTATTACTGC+TGG 0.392303 2.1:-65666647 MS.gene002901:CDS
TGTTTCATCACAAGCTGGTC+AGG 0.403214 2.1:-65668953 MS.gene002901:intron
GGACGAGGAAGTAGAGGAGG+GGG 0.404238 2.1:+65669406 None:intergenic
ACCATCGGCGGCGGCGCGAT+GGG 0.417942 2.1:+65669302 None:intergenic
GAGAGGGAGGAGGATGAAGA+AGG 0.435215 2.1:+65669437 None:intergenic
GATGTGTTGTTGTTGAATCA+TGG 0.436317 2.1:-65669126 MS.gene002901:CDS
GATACTCCTGGACTTGTAGA+AGG 0.438678 2.1:-65667322 MS.gene002901:intron
GCATTGCAACAAGAGGTTAT+AGG 0.440395 2.1:-65667385 MS.gene002901:CDS
TCTTTCCTATTCTTCATTTG+AGG 0.444715 2.1:+65669000 None:intergenic
AAGACGTGGCGGTTGGTGAT+TGG 0.448742 2.1:+65669363 None:intergenic
ATTGGGATCTTGATGGGACG+GGG 0.448925 2.1:+65669381 None:intergenic
ATTCAACAACAACACATCAA+TGG 0.449590 2.1:+65669131 None:intergenic
TATCATTTCTTGCAATTTGG+AGG 0.451120 2.1:-65666729 MS.gene002901:CDS
AGACGTGGCGGTTGGTGATT+GGG 0.456352 2.1:+65669364 None:intergenic
TTCAACAACAACACATCAAT+GGG 0.463160 2.1:+65669132 None:intergenic
GGCGGACGAGGAAGTAGAGG+AGG 0.463478 2.1:+65669403 None:intergenic
ACCGGTGGCTCAAGCGGCAT+CGG 0.466168 2.1:-65669336 MS.gene002901:CDS
GCCGATGCCGCTTGAGCCAC+CGG 0.472638 2.1:+65669335 None:intergenic
GTTTAAGAACTGAATGTGTA+TGG 0.475273 2.1:+65665427 None:intergenic
CACATACTCTATCCCGTACC+TGG 0.480060 2.1:+65665381 None:intergenic
ACGATTGATGTTAATTTGAT+GGG 0.487967 2.1:-65669051 MS.gene002901:CDS
AACGCTACCGGCGTAGAAGT+AGG 0.491607 2.1:-65669216 MS.gene002901:CDS
GGGATAAACCTGAAGTTGCT+AGG 0.498430 2.1:+65666693 None:intergenic
ACGCTACCGGCGTAGAAGTA+GGG 0.501954 2.1:-65669215 MS.gene002901:CDS
AGTCCAGGAGTATCAGTGTC+TGG 0.502012 2.1:+65667331 None:intergenic
TGATTACCTTCTACAAGTCC+AGG 0.503150 2.1:+65667316 None:intergenic
GATTGGGATCTTGATGGGAC+GGG 0.504022 2.1:+65669380 None:intergenic
ATTCTTAATGGCATTTGTTG+AGG 0.509829 2.1:-65666660 MS.gene002901:CDS
TTGGGATCTTGATGGGACGG+GGG 0.514864 2.1:+65669382 None:intergenic
CATTCAGTTCTTAAACTATG+TGG 0.516207 2.1:-65665420 MS.gene002901:CDS
TTGGTGATTGGGATCTTGAT+GGG 0.518204 2.1:+65669375 None:intergenic
TGCTTCTTCGAGTTTCGTGA+GGG 0.518995 2.1:+65669254 None:intergenic
AACCGCCACGTCTTCATCAC+CGG 0.521387 2.1:-65669354 MS.gene002901:CDS
CGTGAGGGATCGTGCCATGA+TGG 0.522842 2.1:+65669269 None:intergenic
CCTCCAGACACTGATACTCC+TGG 0.522898 2.1:-65667334 MS.gene002901:CDS
ATCATTTCTTGCAATTTGGA+GGG 0.526476 2.1:-65666728 MS.gene002901:CDS
TACGCCGGTAGCGTTCTTGA+CGG 0.529338 2.1:+65669224 None:intergenic
CCATTAAGAATGACCTCTGA+GGG 0.529640 2.1:+65666672 None:intergenic
TTCATCACCGGTGGCTCAAG+CGG 0.530465 2.1:-65669342 MS.gene002901:CDS
CGGACGAGGAAGTAGAGGAG+GGG 0.536057 2.1:+65669405 None:intergenic
GATGGAGACACGTGCACCAT+CGG 0.536595 2.1:+65669287 None:intergenic
TGATTGGGATCTTGATGGGA+CGG 0.536771 2.1:+65669379 None:intergenic
GACACGTGCACCATCGGCGG+CGG 0.536822 2.1:+65669293 None:intergenic
GAAACAAAAGCAATAGAAGC+AGG 0.538608 2.1:+65668970 None:intergenic
TACTTCCATACCAGTTCCAC+TGG 0.538704 2.1:+65666597 None:intergenic
AGCAGAAGCATTGCAACAAG+AGG 0.543956 2.1:-65667392 MS.gene002901:CDS
TTGCTTCTTCGAGTTTCGTG+AGG 0.545567 2.1:+65669253 None:intergenic
AACTCCGTCAAGAACGCTAC+CGG 0.545959 2.1:-65669228 MS.gene002901:CDS
TGTTAAATGCGAAGCAAATG+TGG 0.551486 2.1:-65665520 MS.gene002901:CDS
GCCAGTAAATTTGGCCTCCG+TGG 0.557668 2.1:-65667418 MS.gene002901:CDS
AGCTTTCTGAGCAACTTCAT+CGG 0.559805 2.1:+65666778 None:intergenic
AAGAAAGTAGTTGATGAAGC+TGG 0.565432 2.1:-65669156 MS.gene002901:CDS
AGAGTGCATCAAGTGCTTTG+AGG 0.565684 2.1:+65665556 None:intergenic
GGATAAACCTGAAGTTGCTA+GGG 0.579338 2.1:+65666694 None:intergenic
GGCTTTCATAAAACCAGAAG+AGG 0.581855 2.1:+65666799 None:intergenic
TGGTGCACGTGTCTCCATCA+TGG 0.583390 2.1:-65669283 MS.gene002901:CDS
CAGGTACGGGATAGAGTATG+TGG 0.588579 2.1:-65665380 MS.gene002901:CDS
CAGGAGTATCAGTGTCTGGA+GGG 0.591739 2.1:+65667335 None:intergenic
GCGGACGAGGAAGTAGAGGA+GGG 0.606621 2.1:+65669404 None:intergenic
GAATATCCCTACTTCTACGC+CGG 0.630276 2.1:+65669209 None:intergenic
CCAGGAGTATCAGTGTCTGG+AGG 0.642770 2.1:+65667334 None:intergenic
CGCCACGTCTTCATCACCGG+TGG 0.643697 2.1:-65669351 MS.gene002901:CDS
AGCCACCGGTGATGAAGACG+TGG 0.652992 2.1:+65669349 None:intergenic
GGAGACACGTGCACCATCGG+CGG 0.653603 2.1:+65669290 None:intergenic
TAGCAGCACTATGTTTCCAG+TGG 0.655763 2.1:-65666613 MS.gene002901:CDS
GAAGAAGGAGAAGAATGCGT+CGG 0.665412 2.1:+65669452 None:intergenic
GCCATTAAGAATGACCTCTG+AGG 0.666181 2.1:+65666671 None:intergenic
CTTCAGGTTTATCCCCTCAG+AGG 0.666800 2.1:-65666685 MS.gene002901:CDS
GGTGATGAAGACGTGGCGGT+TGG 0.672251 2.1:+65669356 None:intergenic
AATTTCATCGTAGAGCAGAG+TGG 0.693903 2.1:+65665490 None:intergenic
GCAATGCTTCTGCTAAACCA+CGG 0.698466 2.1:+65667401 None:intergenic
CACCGGTGATGAAGACGTGG+CGG 0.698543 2.1:+65669352 None:intergenic
AGAAGTAGGGATATTCGCAG+CGG 0.746455 2.1:-65669202 MS.gene002901:CDS
CATTAAGAATGACCTCTGAG+GGG 0.759100 2.1:+65666673 None:intergenic
ATGCTTCTGCTAAACCACGG+AGG 0.773999 2.1:+65667404 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTATGTTTTTTTTTTTTT+TGG - chr2.1:65666110-65666129 MS.gene002901:intron 10.0%
!!! ATTAATATTTTTTTTTACTG+TGG - chr2.1:65667248-65667267 MS.gene002901:intron 10.0%
!! AAGTTAATAGATTATTTGTT+AGG - chr2.1:65666344-65666363 MS.gene002901:intron 15.0%
!! AATTTAGAAAGTCATTATTA+AGG + chr2.1:65668920-65668939 None:intergenic 15.0%
!! ATTTAGAAAGTCATTATTAA+GGG + chr2.1:65668919-65668938 None:intergenic 15.0%
!! CTAACATAAAGTTTATTATT+GGG - chr2.1:65666696-65666715 MS.gene002901:CDS 15.0%
!! CTGATAAATTATGTTTATTA+TGG - chr2.1:65665912-65665931 MS.gene002901:intron 15.0%
!! TCTAACATAAAGTTTATTAT+TGG - chr2.1:65666695-65666714 MS.gene002901:CDS 15.0%
!!! AATAATGACTTTCTAAATTT+TGG - chr2.1:65668921-65668940 MS.gene002901:intron 15.0%
!!! TTAAGTTGATAAAAATAAGA+TGG - chr2.1:65668338-65668357 MS.gene002901:intron 15.0%
!!! TTTTTCTATTTAAATGATTC+CGG - chr2.1:65669201-65669220 MS.gene002901:CDS 15.0%
!!! TTTTTTTTTTGGAAAAACAT+AGG - chr2.1:65666121-65666140 MS.gene002901:intron 15.0%
!! AAAAAAAAACATAACTCCAT+TGG + chr2.1:65666106-65666125 None:intergenic 20.0%
!! AAAAAAAACATAACTCCATT+GGG + chr2.1:65666105-65666124 None:intergenic 20.0%
!! AAATCAAAAGAAAAAGAGAA+GGG + chr2.1:65667066-65667085 None:intergenic 20.0%
!! ACACTAAATATGAAATTTCA+GGG + chr2.1:65668550-65668569 None:intergenic 20.0%
!! AGAATTTCTATTATAAAGAG+TGG + chr2.1:65666914-65666933 None:intergenic 20.0%
!! ATGACAAAATCAGAAAATTT+AGG + chr2.1:65667875-65667894 None:intergenic 20.0%
!! CAAATTATAGATAGTTTCTT+TGG + chr2.1:65666268-65666287 None:intergenic 20.0%
!! CCATAAAATATAAAACTCAA+CGG - chr2.1:65666545-65666564 MS.gene002901:intron 20.0%
!! GAATTACTAACAAAATCATT+TGG + chr2.1:65667752-65667771 None:intergenic 20.0%
!! GAATTTCTATTATAAAGAGT+GGG + chr2.1:65666913-65666932 None:intergenic 20.0%
!! GATATGCTAAAAGTAAAAAT+AGG + chr2.1:65667193-65667212 None:intergenic 20.0%
!! TATATAGTATATTGTCATGT+AGG - chr2.1:65667826-65667845 MS.gene002901:intron 20.0%
!! TATCGAATTGTTATAAGAAT+GGG - chr2.1:65667155-65667174 MS.gene002901:intron 20.0%
!! TTAGAATAGTTTCAAATAGT+GGG + chr2.1:65666680-65666699 None:intergenic 20.0%
!!! ATGACATTTTATAAAGGTAA+GGG + chr2.1:65668475-65668494 None:intergenic 20.0%
!!! TATTTTTTAATGTGGAGTTT+AGG - chr2.1:65667353-65667372 MS.gene002901:CDS 20.0%
!!! TTTTATCATTTCTTGCAATT+TGG - chr2.1:65668091-65668110 MS.gene002901:intron 20.0%
!!! TTTTCTATTTAAATGATTCC+GGG - chr2.1:65669202-65669221 MS.gene002901:CDS 20.0%
! AAAAAAACATAACTCCATTG+GGG + chr2.1:65666104-65666123 None:intergenic 25.0%
! AACATAGATCAATTACCAAA+AGG + chr2.1:65667573-65667592 None:intergenic 25.0%
! AAGTTTAAGTACAAACTGAA+AGG - chr2.1:65667950-65667969 MS.gene002901:intron 25.0%
! AATAAAGTGTAAGTGTACAT+TGG - chr2.1:65668813-65668832 MS.gene002901:intron 25.0%
! ACATAAAGTTTATTATTGGG+TGG - chr2.1:65666699-65666718 MS.gene002901:CDS 25.0%
! ACTATCATAAAATGTTAAGC+TGG + chr2.1:65668675-65668694 None:intergenic 25.0%
! AGTTTATACCAATTATTGTG+TGG - chr2.1:65665963-65665982 MS.gene002901:intron 25.0%
! ATTTCATGTATTCAGTATTC+TGG - chr2.1:65669040-65669059 MS.gene002901:CDS 25.0%
! CTATCGAATTGTTATAAGAA+TGG - chr2.1:65667154-65667173 MS.gene002901:intron 25.0%
! CTATTTATTTACAGCATAGA+CGG + chr2.1:65669179-65669198 None:intergenic 25.0%
! GAAAAAATGCCTTGATATAA+AGG + chr2.1:65668893-65668912 None:intergenic 25.0%
! GAAACAATACCTTTATATCA+AGG - chr2.1:65668881-65668900 MS.gene002901:intron 25.0%
! GAAATCAAAAGAAAAAGAGA+AGG + chr2.1:65667067-65667086 None:intergenic 25.0%
! GACACTAAATATGAAATTTC+AGG + chr2.1:65668551-65668570 None:intergenic 25.0%
! GATACACCCTATAAAAATAA+GGG + chr2.1:65668444-65668463 None:intergenic 25.0%
! GTATTGTTTCCTAAATCAAA+GGG + chr2.1:65668871-65668890 None:intergenic 25.0%
! GTTAGAATAGTTTCAAATAG+TGG + chr2.1:65666681-65666700 None:intergenic 25.0%
! GTTTATACCAATTATTGTGT+GGG - chr2.1:65665964-65665983 MS.gene002901:intron 25.0%
! TACTGAATACATGAAATTTG+TGG + chr2.1:65669037-65669056 None:intergenic 25.0%
! TCTAATTATAAGGATCCAAA+TGG - chr2.1:65668768-65668787 MS.gene002901:intron 25.0%
! TCTACTTCACATTCATAAAT+TGG + chr2.1:65669093-65669112 None:intergenic 25.0%
! TGATACACCCTATAAAAATA+AGG + chr2.1:65668445-65668464 None:intergenic 25.0%
! TTATGGTTATGTAGCTTATT+CGG - chr2.1:65667383-65667402 MS.gene002901:CDS 25.0%
! TTTCAGTTTGTACTTAAACT+TGG + chr2.1:65667951-65667970 None:intergenic 25.0%
! TTTCATATTTAGTGTCTACT+TGG - chr2.1:65668555-65668574 MS.gene002901:intron 25.0%
!! ACACATATTAGTATTCCTTT+TGG - chr2.1:65667555-65667574 MS.gene002901:intron 25.0%
!! ACGATTGATGTTAATTTGAT+GGG - chr2.1:65665772-65665791 MS.gene002901:intron 25.0%
!! ACTGACATGACATTTTATAA+AGG + chr2.1:65668481-65668500 None:intergenic 25.0%
!! AGCTTAACATTTTATGATAG+TGG - chr2.1:65668674-65668693 MS.gene002901:intron 25.0%
!! ATGATTCAGATGATATGTTT+TGG + chr2.1:65667119-65667138 None:intergenic 25.0%
!! CATGACATTTTATAAAGGTA+AGG + chr2.1:65668476-65668495 None:intergenic 25.0%
!! GCTTAACATTTTATGATAGT+GGG - chr2.1:65668675-65668694 MS.gene002901:intron 25.0%
!! TACGATTGATGTTAATTTGA+TGG - chr2.1:65665771-65665790 MS.gene002901:intron 25.0%
!! TTTTATAGGGTGTATCAATT+TGG - chr2.1:65668448-65668467 MS.gene002901:intron 25.0%
!!! AAAAGCGTTCTCTAATTATA+AGG - chr2.1:65668758-65668777 MS.gene002901:intron 25.0%
!!! AGTTGACTTGTTAAAATGAA+TGG - chr2.1:65666450-65666469 MS.gene002901:intron 25.0%
!!! CCGTTGAGTTTTATATTTTA+TGG + chr2.1:65666548-65666567 None:intergenic 25.0%
!!! TGATGATTTTTTCTTCATAC+AGG - chr2.1:65669240-65669259 MS.gene002901:CDS 25.0%
AATCAATCCCACACAATAAT+TGG + chr2.1:65665974-65665993 None:intergenic 30.0%
ACTTGTAGAAGGTAATCAAT+TGG - chr2.1:65667512-65667531 MS.gene002901:intron 30.0%
ATAAAAATAAGGGAGCGAAT+TGG + chr2.1:65668434-65668453 None:intergenic 30.0%
ATATTGATCATGCAATGTAG+GGG + chr2.1:65666482-65666501 None:intergenic 30.0%
ATCATTTCTTGCAATTTGGA+GGG - chr2.1:65668095-65668114 MS.gene002901:intron 30.0%
ATCTAATATCGCTAATAAGC+TGG - chr2.1:65666412-65666431 MS.gene002901:intron 30.0%
ATGTTTATTATGGCCATGTT+TGG - chr2.1:65665922-65665941 MS.gene002901:intron 30.0%
ATTCAACAACAACACATCAA+TGG + chr2.1:65665695-65665714 None:intergenic 30.0%
CATATTGATCATGCAATGTA+GGG + chr2.1:65666483-65666502 None:intergenic 30.0%
CATTCAGTTCTTAAACTATG+TGG - chr2.1:65669403-65669422 MS.gene002901:CDS 30.0%
CTATTAACTTCTTCCAAACA+TGG + chr2.1:65666334-65666353 None:intergenic 30.0%
CTTTGGTTACAGTTTAAGAA+TGG - chr2.1:65668944-65668963 MS.gene002901:intron 30.0%
GACACAAGTATGTAATTTCA+TGG + chr2.1:65668582-65668601 None:intergenic 30.0%
GATGACAAATACAGGATAAA+TGG - chr2.1:65668616-65668635 MS.gene002901:intron 30.0%
GGTATTGTTTCCTAAATCAA+AGG + chr2.1:65668872-65668891 None:intergenic 30.0%
GTGAGAGAATAAAGGTTATT+AGG + chr2.1:65666956-65666975 None:intergenic 30.0%
GTTTAAGAACTGAATGTGTA+TGG + chr2.1:65669399-65669418 None:intergenic 30.0%
TAATCATGACATAGAGTAGA+TGG - chr2.1:65668378-65668397 MS.gene002901:intron 30.0%
TAGAAATTCTCCTAGATTTG+AGG - chr2.1:65666924-65666943 MS.gene002901:intron 30.0%
TAGGATATTACCTCAAATCT+AGG + chr2.1:65666937-65666956 None:intergenic 30.0%
TATATTGTCATGTAGGAAGT+AGG - chr2.1:65667833-65667852 MS.gene002901:intron 30.0%
TATCATTTCTTGCAATTTGG+AGG - chr2.1:65668094-65668113 MS.gene002901:intron 30.0%
TCATATTGATCATGCAATGT+AGG + chr2.1:65666484-65666503 None:intergenic 30.0%
TCATCTGAATCATTAGCTAT+AGG - chr2.1:65667126-65667145 MS.gene002901:intron 30.0%
TCTCTGTAATTAACCATGTT+TGG - chr2.1:65666318-65666337 MS.gene002901:intron 30.0%
TCTTTCCTATTCTTCATTTG+AGG + chr2.1:65665826-65665845 None:intergenic 30.0%
TGTAGAAAGTGAGAGAATAA+AGG + chr2.1:65666964-65666983 None:intergenic 30.0%
TTAAGCTGTTTATCCAAACA+TGG + chr2.1:65665938-65665957 None:intergenic 30.0%
TTCAACAACAACACATCAAT+GGG + chr2.1:65665694-65665713 None:intergenic 30.0%
TTCAGTTTACATCGAAAATG+AGG - chr2.1:65667591-65667610 MS.gene002901:intron 30.0%
TTCTATTATAAAGAGTGGGA+AGG + chr2.1:65666909-65666928 None:intergenic 30.0%
TTTCTAACAAACATCTAGAG+TGG + chr2.1:65666080-65666099 None:intergenic 30.0%
TTTGTTAGACAGTTTCCATT+TGG + chr2.1:65668786-65668805 None:intergenic 30.0%
! AGACTGTCTAGAATGATTAA+TGG - chr2.1:65669110-65669129 MS.gene002901:CDS 30.0%
! ATTCTTAATGGCATTTGTTG+AGG - chr2.1:65668163-65668182 MS.gene002901:intron 30.0%
! GCTAAACAACTCATTAGTTT+AGG - chr2.1:65667626-65667645 MS.gene002901:intron 30.0%
! TATAGGGAAGGTATAGAAAA+TGG + chr2.1:65666172-65666191 None:intergenic 30.0%
! TTTTAATGTGGAGTTTAGGT+GGG - chr2.1:65667357-65667376 MS.gene002901:CDS 30.0%
! TTTTTAATGTGGAGTTTAGG+TGG - chr2.1:65667356-65667375 MS.gene002901:CDS 30.0%
!! AGATGATATGTTTTGGATGT+TGG + chr2.1:65667112-65667131 None:intergenic 30.0%
!!! ATTCGCTCCCTTATTTTTAT+AGG - chr2.1:65668434-65668453 MS.gene002901:intron 30.0%
!!! GACTTTCTAAATTTTGGCTT+TGG - chr2.1:65668927-65668946 MS.gene002901:intron 30.0%
!!! TTCGCTCCCTTATTTTTATA+GGG - chr2.1:65668435-65668454 MS.gene002901:intron 30.0%
AAACAATGTCACGGCATAAT+TGG + chr2.1:65666022-65666041 None:intergenic 35.0%
AAACTGCACTAGTGTGAATT+GGG - chr2.1:65666993-65667012 MS.gene002901:intron 35.0%
AAAGTTGTCAAGAGTCAGTT+AGG + chr2.1:65666865-65666884 None:intergenic 35.0%
AAATTTGACTGACACCCATT+TGG - chr2.1:65666377-65666396 MS.gene002901:intron 35.0%
AACCCCATAAAACAATGTCA+CGG + chr2.1:65666031-65666050 None:intergenic 35.0%
ACACTAGTGCAGTTTCTATA+AGG + chr2.1:65666988-65667007 None:intergenic 35.0%
ACTAATGAGTTGTTTAGCCA+AGG + chr2.1:65667624-65667643 None:intergenic 35.0%
AGAAAAGTGAGGAACTAAGT+TGG - chr2.1:65668718-65668737 MS.gene002901:intron 35.0%
AGTTTAGGTCAACCTCAATA+TGG - chr2.1:65667641-65667660 MS.gene002901:intron 35.0%
ATAGTGTGCAGAAACCAAAT+GGG + chr2.1:65666394-65666413 None:intergenic 35.0%
CTTTCGTAAAATGATGAGTG+TGG - chr2.1:65669152-65669171 MS.gene002901:CDS 35.0%
CTTTGCCTCAAATGAAGAAT+AGG - chr2.1:65665818-65665837 MS.gene002901:intron 35.0%
GAAAAGTGAGGAACTAAGTT+GGG - chr2.1:65668719-65668738 MS.gene002901:intron 35.0%
GAAACAAAAGCAATAGAAGC+AGG + chr2.1:65665856-65665875 None:intergenic 35.0%
GATGTTAGTCCTTGACAATT+TGG - chr2.1:65668835-65668854 MS.gene002901:intron 35.0%
GGCAATTGCAACTATTGAAA+TGG - chr2.1:65666588-65666607 MS.gene002901:intron 35.0%
GGCAGCTAAATGAAGTTAAT+TGG - chr2.1:65666200-65666219 MS.gene002901:intron 35.0%
TACCTTCCCTATATATCGAT+TGG - chr2.1:65666179-65666198 MS.gene002901:intron 35.0%
TAGCATATCAGTTCAACACT+TGG - chr2.1:65667204-65667223 MS.gene002901:intron 35.0%
TAGCTGCCAATCGATATATA+GGG + chr2.1:65666188-65666207 None:intergenic 35.0%
TCAAATTCACAAACGATACC+CGG + chr2.1:65669223-65669242 None:intergenic 35.0%
TCAATATGGATGTGGAATCA+GGG - chr2.1:65667655-65667674 MS.gene002901:intron 35.0%
TCCATATTACGAGTGTCTTT+GGG - chr2.1:65667803-65667822 MS.gene002901:intron 35.0%
TGACACATCATAGAAAAGTG+AGG - chr2.1:65668707-65668726 MS.gene002901:intron 35.0%
TGAGCTTAAAGCTCTTACAA+TGG - chr2.1:65666754-65666773 MS.gene002901:CDS 35.0%
TGATACTCAGTATGTAACTC+CGG + chr2.1:65668521-65668540 None:intergenic 35.0%
TGGAAACTGTCTAACAAAAG+TGG - chr2.1:65668788-65668807 MS.gene002901:intron 35.0%
TGTTAAATGCGAAGCAAATG+TGG - chr2.1:65669303-65669322 MS.gene002901:CDS 35.0%
TTAGCTGCCAATCGATATAT+AGG + chr2.1:65666189-65666208 None:intergenic 35.0%
TTCCATATTACGAGTGTCTT+TGG - chr2.1:65667802-65667821 MS.gene002901:intron 35.0%
TTTGGAAAAACATAGGAGTG+TGG - chr2.1:65666128-65666147 MS.gene002901:intron 35.0%
TTTGTTGAGGTTATTACTGC+TGG - chr2.1:65668176-65668195 MS.gene002901:intron 35.0%
! CTGATTTTTATCTCCAGGTA+CGG - chr2.1:65669429-65669448 MS.gene002901:CDS 35.0%
! GATGTGTTGTTGTTGAATCA+TGG - chr2.1:65665697-65665716 MS.gene002901:intron 35.0%
! GGTTTCTGATTTTTATCTCC+AGG - chr2.1:65669424-65669443 MS.gene002901:CDS 35.0%
! TCTTACAATGGTGGAAAGAT+GGG - chr2.1:65666766-65666785 MS.gene002901:CDS 35.0%
! TGATTTTTATCTCCAGGTAC+GGG - chr2.1:65669430-65669449 MS.gene002901:CDS 35.0%
! TGTGTTTTATGCGTTGGAAT+TGG - chr2.1:65665720-65665739 MS.gene002901:intron 35.0%
! TGTTTGTTAGAAATCCCCAA+TGG - chr2.1:65666087-65666106 MS.gene002901:intron 35.0%
! TTTTGGATGTTGGAATGCAA+AGG + chr2.1:65667102-65667121 None:intergenic 35.0%
!! AAGAAAGTAGTTGATGAAGC+TGG - chr2.1:65665667-65665686 MS.gene002901:intron 35.0%
!! ATGCCGTGACATTGTTTTAT+GGG - chr2.1:65666025-65666044 MS.gene002901:intron 35.0%
!! TATGCCGTGACATTGTTTTA+TGG - chr2.1:65666024-65666043 MS.gene002901:intron 35.0%
!!! TTAGAGAACGCTTTTAGTTC+AGG + chr2.1:65668753-65668772 None:intergenic 35.0%
AAAATCATTGCAGCCTCTTC+TGG - chr2.1:65668011-65668030 MS.gene002901:intron 40.0%
AATTTCATCGTAGAGCAGAG+TGG + chr2.1:65669336-65669355 None:intergenic 40.0%
ACCCAAAGACACTCGTAATA+TGG + chr2.1:65667807-65667826 None:intergenic 40.0%
AGCTTTCTGAGCAACTTCAT+CGG + chr2.1:65668048-65668067 None:intergenic 40.0%
AGTTAGGAGAGATTTCTCTC+TGG + chr2.1:65666849-65666868 None:intergenic 40.0%
ATCCAAGCGATGACAAATAC+AGG - chr2.1:65668608-65668627 MS.gene002901:intron 40.0%
ATCCTGTATTTGTCATCGCT+TGG + chr2.1:65668613-65668632 None:intergenic 40.0%
CAAGAGATGATCTAGTGATG+TGG - chr2.1:65667320-65667339 MS.gene002901:intron 40.0%
CACACTCTACAACAACTCAA+CGG - chr2.1:65666627-65666646 MS.gene002901:CDS 40.0%
CATGACATAGAGTAGATGGA+AGG - chr2.1:65668382-65668401 MS.gene002901:intron 40.0%
CATTAAGAATGACCTCTGAG+GGG + chr2.1:65668153-65668172 None:intergenic 40.0%
CCATTAAGAATGACCTCTGA+GGG + chr2.1:65668154-65668173 None:intergenic 40.0%
CTCAACCATTTGCAGAAGAT+GGG + chr2.1:65666738-65666757 None:intergenic 40.0%
CTCAATATGGATGTGGAATC+AGG - chr2.1:65667654-65667673 MS.gene002901:intron 40.0%
CTGATTCCACATCCATATTG+AGG + chr2.1:65667656-65667675 None:intergenic 40.0%
GAAAATGAGGCAAGTAACCT+TGG - chr2.1:65667604-65667623 MS.gene002901:intron 40.0%
GAAACTGCACTAGTGTGAAT+TGG - chr2.1:65666992-65667011 MS.gene002901:intron 40.0%
GATAGTGTGCAGAAACCAAA+TGG + chr2.1:65666395-65666414 None:intergenic 40.0%
GCATTGCAACAAGAGGTTAT+AGG - chr2.1:65667438-65667457 MS.gene002901:CDS 40.0%
GCTTAAAGCTCTTACAATGG+TGG - chr2.1:65666757-65666776 MS.gene002901:CDS 40.0%
GCTTATTCGGCCAGTAAATT+TGG - chr2.1:65667396-65667415 MS.gene002901:CDS 40.0%
GGAGTTTAGGTGGGAATTTA+TGG - chr2.1:65667366-65667385 MS.gene002901:CDS 40.0%
GGATAAACCTGAAGTTGCTA+GGG + chr2.1:65668132-65668151 None:intergenic 40.0%
GGCTTTCATAAAACCAGAAG+AGG + chr2.1:65668027-65668046 None:intergenic 40.0%
TAGACAAATTTCCCACGAGA+TGG + chr2.1:65667916-65667935 None:intergenic 40.0%
TATGAACTCCTACTAGAGCT+AGG - chr2.1:65666815-65666834 MS.gene002901:CDS 40.0%
TGAGTTGTTGTAGAGTGTGT+TGG + chr2.1:65666626-65666645 None:intergenic 40.0%
TGATTACCTTCTACAAGTCC+AGG + chr2.1:65667510-65667529 None:intergenic 40.0%
TGCCAATCGATATATAGGGA+AGG + chr2.1:65666184-65666203 None:intergenic 40.0%
TGCGTTGGAATTGGAGAAAA+TGG - chr2.1:65665729-65665748 MS.gene002901:intron 40.0%
TGGAATGCAAAGGAAGTGAA+GGG + chr2.1:65667092-65667111 None:intergenic 40.0%
TGTTCAAGCACTTCAATTGC+AGG + chr2.1:65667681-65667700 None:intergenic 40.0%
TTGATCCCATCTTCTGCAAA+TGG - chr2.1:65666730-65666749 MS.gene002901:CDS 40.0%
TTGGAATGCAAAGGAAGTGA+AGG + chr2.1:65667093-65667112 None:intergenic 40.0%
! AGAAGAGGCTGCAATGATTT+TGG + chr2.1:65668012-65668031 None:intergenic 40.0%
! CAACAACTCAACGGCAATTT+TGG - chr2.1:65666636-65666655 MS.gene002901:CDS 40.0%
! CTCTTACAATGGTGGAAAGA+TGG - chr2.1:65666765-65666784 MS.gene002901:CDS 40.0%
! CTTACAATGGTGGAAAGATG+GGG - chr2.1:65666767-65666786 MS.gene002901:CDS 40.0%
! GAGAGATTTCTCTCTGGTTT+AGG + chr2.1:65666843-65666862 None:intergenic 40.0%
! GGTATGGAAGTATAGAGAAG+TGG - chr2.1:65668237-65668256 MS.gene002901:intron 40.0%
! GTTGCTCAGAAAGCTTTTGA+TGG - chr2.1:65668053-65668072 MS.gene002901:intron 40.0%
! TCATGGTGTGTTTTATGCGT+TGG - chr2.1:65665714-65665733 MS.gene002901:intron 40.0%
! TTGGTGATTGGGATCTTGAT+GGG + chr2.1:65665451-65665470 None:intergenic 40.0%
!! CCTTGACAATTTGGTTTGCA+CGG - chr2.1:65668844-65668863 MS.gene002901:intron 40.0%
!! GCTTTTGTTTCATCACAAGC+TGG - chr2.1:65665865-65665884 MS.gene002901:intron 40.0%
!! TCAACGGCAATTTTGGTATG+TGG - chr2.1:65666643-65666662 MS.gene002901:CDS 40.0%
!! TGCCGTGACATTGTTTTATG+GGG - chr2.1:65666026-65666045 MS.gene002901:intron 40.0%
AAGCTGGTCAGGTATGGAAT+TGG - chr2.1:65665881-65665900 MS.gene002901:intron 45.0%
AGAAGTAGGGATATTCGCAG+CGG - chr2.1:65665621-65665640 MS.gene002901:intron 45.0%
AGAGTGCATCAAGTGCTTTG+AGG + chr2.1:65669270-65669289 None:intergenic 45.0%
AGATGGCACACAATGGTACT+TGG + chr2.1:65667899-65667918 None:intergenic 45.0%
AGTGTGAATTGGGCCCAATT+GGG - chr2.1:65667003-65667022 MS.gene002901:intron 45.0%
CACTATGTTTCCAGTGGAAC+TGG - chr2.1:65668216-65668235 MS.gene002901:intron 45.0%
CCCTCAGAGGTCATTCTTAA+TGG - chr2.1:65668151-65668170 MS.gene002901:intron 45.0%
CCGTGCAAACCAAATTGTCA+AGG + chr2.1:65668847-65668866 None:intergenic 45.0%
GAAGAAGGAGAAGAATGCGT+CGG + chr2.1:65665374-65665393 None:intergenic 45.0%
GAATATCCCTACTTCTACGC+CGG + chr2.1:65665617-65665636 None:intergenic 45.0%
GATACTCCTGGACTTGTAGA+AGG - chr2.1:65667501-65667520 MS.gene002901:intron 45.0%
GCAATGCTTCTGCTAAACCA+CGG + chr2.1:65667425-65667444 None:intergenic 45.0%
GCCATTAAGAATGACCTCTG+AGG + chr2.1:65668155-65668174 None:intergenic 45.0%
GCTCAACCATTTGCAGAAGA+TGG + chr2.1:65666739-65666758 None:intergenic 45.0%
GGGATAAACCTGAAGTTGCT+AGG + chr2.1:65668133-65668152 None:intergenic 45.0%
GGTCAACCTCAATATGGATG+TGG - chr2.1:65667647-65667666 MS.gene002901:intron 45.0%
TACTTCCATACCAGTTCCAC+TGG + chr2.1:65668229-65668248 None:intergenic 45.0%
TAGAGAAGTGGCACAAGCAA+AGG - chr2.1:65668249-65668268 MS.gene002901:intron 45.0%
TAGCAGCACTATGTTTCCAG+TGG - chr2.1:65668210-65668229 MS.gene002901:intron 45.0%
TAGTGTGAATTGGGCCCAAT+TGG - chr2.1:65667002-65667021 MS.gene002901:intron 45.0%
TGATTGGGATCTTGATGGGA+CGG + chr2.1:65665447-65665466 None:intergenic 45.0%
TGTTTCATCACAAGCTGGTC+AGG - chr2.1:65665870-65665889 MS.gene002901:intron 45.0%
TGTTTCCAGTGGAACTGGTA+TGG - chr2.1:65668221-65668240 MS.gene002901:intron 45.0%
! AGGGAAGATTATAGAGCACC+AGG + chr2.1:65667047-65667066 None:intergenic 45.0%
! GGGAAGATTATAGAGCACCA+GGG + chr2.1:65667046-65667065 None:intergenic 45.0%
! TGCTTCTTCGAGTTTCGTGA+GGG + chr2.1:65665572-65665591 None:intergenic 45.0%
! TTGCACGGTCCCTTTGATTT+AGG - chr2.1:65668859-65668878 MS.gene002901:intron 45.0%
! TTGCTTCTTCGAGTTTCGTG+AGG + chr2.1:65665573-65665592 None:intergenic 45.0%
!! AGCAGAAGCATTGCAACAAG+AGG - chr2.1:65667431-65667450 MS.gene002901:CDS 45.0%
!! CGGCAATTTTGGTATGTGGA+CGG - chr2.1:65666647-65666666 MS.gene002901:CDS 45.0%
!! GCAATGATTTTGGTGAGCTC+TGG + chr2.1:65668002-65668021 None:intergenic 45.0%
!! GCTTTTGATGGCATAAGACG+TGG - chr2.1:65668065-65668084 MS.gene002901:intron 45.0%
!! GTTGGTGATTGGGATCTTGA+TGG + chr2.1:65665452-65665471 None:intergenic 45.0%
!! TTTAGGAGCCTAGCTCTAGT+AGG + chr2.1:65666826-65666845 None:intergenic 45.0%
!!! TTTTATTTTATTTTTTAATG+TGG - chr2.1:65667345-65667364 MS.gene002901:CDS 5.0%
AACTCCGTCAAGAACGCTAC+CGG - chr2.1:65665595-65665614 MS.gene002901:intron 50.0%
AATTGGGCTCTCACACGAAC+TGG - chr2.1:65667019-65667038 MS.gene002901:intron 50.0%
ACCACGGAGGCCAAATTTAC+TGG + chr2.1:65667409-65667428 None:intergenic 50.0%
ACCATTGTGTGCCATCTCGT+GGG - chr2.1:65667902-65667921 MS.gene002901:intron 50.0%
ACGGTTTCACATTGCCCTTG+CGG - chr2.1:65666564-65666583 MS.gene002901:intron 50.0%
ACTCCGGTGACAACAAAGTG+AGG + chr2.1:65668505-65668524 None:intergenic 50.0%
AGTTCGTGTGAGAGCCCAAT+TGG + chr2.1:65667020-65667039 None:intergenic 50.0%
AGTTGCAATTGCCACCGCAA+GGG + chr2.1:65666581-65666600 None:intergenic 50.0%
ATGCTTCTGCTAAACCACGG+AGG + chr2.1:65667422-65667441 None:intergenic 50.0%
ATTGGGATCTTGATGGGACG+GGG + chr2.1:65665445-65665464 None:intergenic 50.0%
CACATACTCTATCCCGTACC+TGG + chr2.1:65669445-65669464 None:intergenic 50.0%
CAGGTACGGGATAGAGTATG+TGG - chr2.1:65669443-65669462 MS.gene002901:CDS 50.0%
CATCACAAGCTGGTCAGGTA+TGG - chr2.1:65665875-65665894 MS.gene002901:intron 50.0%
CTCCGGTGACAACAAAGTGA+GGG + chr2.1:65668504-65668523 None:intergenic 50.0%
GATTGGGATCTTGATGGGAC+GGG + chr2.1:65665446-65665465 None:intergenic 50.0%
GCGTTATCCCTAGCAACTTC+AGG - chr2.1:65668122-65668141 MS.gene002901:intron 50.0%
GTTCGTGTGAGAGCCCAATT+GGG + chr2.1:65667019-65667038 None:intergenic 50.0%
TACCATTGTGTGCCATCTCG+TGG - chr2.1:65667901-65667920 MS.gene002901:intron 50.0%
TAGTTGCAATTGCCACCGCA+AGG + chr2.1:65666582-65666601 None:intergenic 50.0%
! CTTCAGGTTTATCCCCTCAG+AGG - chr2.1:65668138-65668157 MS.gene002901:intron 50.0%
! GTCCCTCACTTTGTTGTCAC+CGG - chr2.1:65668499-65668518 MS.gene002901:intron 50.0%
!! AGTCCAGGAGTATCAGTGTC+TGG + chr2.1:65667495-65667514 None:intergenic 50.0%
!! CAGGAGTATCAGTGTCTGGA+GGG + chr2.1:65667491-65667510 None:intergenic 50.0%
AACCGCCACGTCTTCATCAC+CGG - chr2.1:65665469-65665488 MS.gene002901:CDS 55.0%
AACGCTACCGGCGTAGAAGT+AGG - chr2.1:65665607-65665626 MS.gene002901:intron 55.0%
ACGCTACCGGCGTAGAAGTA+GGG - chr2.1:65665608-65665627 MS.gene002901:intron 55.0%
CCTCCAGACACTGATACTCC+TGG - chr2.1:65667489-65667508 MS.gene002901:intron 55.0%
GAGAGGGAGGAGGATGAAGA+AGG + chr2.1:65665389-65665408 None:intergenic 55.0%
GATGGAGACACGTGCACCAT+CGG + chr2.1:65665539-65665558 None:intergenic 55.0%
GCCAGTAAATTTGGCCTCCG+TGG - chr2.1:65667405-65667424 MS.gene002901:CDS 55.0%
GTTTCACATTGCCCTTGCGG+TGG - chr2.1:65666567-65666586 MS.gene002901:intron 55.0%
TACGCCGGTAGCGTTCTTGA+CGG + chr2.1:65665602-65665621 None:intergenic 55.0%
TCCCACGAGATGGCACACAA+TGG + chr2.1:65667906-65667925 None:intergenic 55.0%
TGGTGCACGTGTCTCCATCA+TGG - chr2.1:65665540-65665559 MS.gene002901:CDS 55.0%
TTCATCACCGGTGGCTCAAG+CGG - chr2.1:65665481-65665500 MS.gene002901:CDS 55.0%
TTGGGATCTTGATGGGACGG+GGG + chr2.1:65665444-65665463 None:intergenic 55.0%
!! AAGACGTGGCGGTTGGTGAT+TGG + chr2.1:65665463-65665482 None:intergenic 55.0%
!! AGACGTGGCGGTTGGTGATT+GGG + chr2.1:65665462-65665481 None:intergenic 55.0%
!! CCAGGAGTATCAGTGTCTGG+AGG + chr2.1:65667492-65667511 None:intergenic 55.0%
AGCCACCGGTGATGAAGACG+TGG + chr2.1:65665477-65665496 None:intergenic 60.0%
CACCGGTGATGAAGACGTGG+CGG + chr2.1:65665474-65665493 None:intergenic 60.0%
CGGACGAGGAAGTAGAGGAG+GGG + chr2.1:65665421-65665440 None:intergenic 60.0%
CGTGAGGGATCGTGCCATGA+TGG + chr2.1:65665557-65665576 None:intergenic 60.0%
CTCTCACACGAACTGGACCC+TGG - chr2.1:65667026-65667045 MS.gene002901:intron 60.0%
GCGGACGAGGAAGTAGAGGA+GGG + chr2.1:65665422-65665441 None:intergenic 60.0%
GGACGAGGAAGTAGAGGAGG+GGG + chr2.1:65665420-65665439 None:intergenic 60.0%
GGTGATGAAGACGTGGCGGT+TGG + chr2.1:65665470-65665489 None:intergenic 60.0%
ACCGGTGGCTCAAGCGGCAT+CGG - chr2.1:65665487-65665506 MS.gene002901:CDS 65.0%
AGTAGAGGAGGGGGAGGAGG+AGG + chr2.1:65665411-65665430 None:intergenic 65.0%
CGAGGAAGTAGAGGAGGGGG+AGG + chr2.1:65665417-65665436 None:intergenic 65.0%
CGCCACGTCTTCATCACCGG+TGG - chr2.1:65665472-65665491 MS.gene002901:CDS 65.0%
GGAAGTAGAGGAGGGGGAGG+AGG + chr2.1:65665414-65665433 None:intergenic 65.0%
GGAGACACGTGCACCATCGG+CGG + chr2.1:65665536-65665555 None:intergenic 65.0%
GGATCTTGATGGGACGGGGG+CGG + chr2.1:65665441-65665460 None:intergenic 65.0%
GGCGGACGAGGAAGTAGAGG+AGG + chr2.1:65665423-65665442 None:intergenic 65.0%
AGGAGGGGGAGGAGGAGGAG+AGG + chr2.1:65665406-65665425 None:intergenic 70.0%
GACACGTGCACCATCGGCGG+CGG + chr2.1:65665533-65665552 None:intergenic 70.0%
GGAGGAGGAGGAGAGGGAGG+AGG + chr2.1:65665399-65665418 None:intergenic 70.0%
GGAGGGGGAGGAGGAGGAGA+GGG + chr2.1:65665405-65665424 None:intergenic 70.0%
GGGGGCGGACGAGGAAGTAG+AGG + chr2.1:65665426-65665445 None:intergenic 70.0%
! GCCGATGCCGCTTGAGCCAC+CGG + chr2.1:65665491-65665510 None:intergenic 70.0%
ACCATCGGCGGCGGCGCGAT+GGG + chr2.1:65665524-65665543 None:intergenic 75.0%
GGGGGAGGAGGAGGAGAGGG+AGG + chr2.1:65665402-65665421 None:intergenic 75.0%
TGATGGGACGGGGGCGGACG+AGG + chr2.1:65665435-65665454 None:intergenic 75.0%
! CACCATCGGCGGCGGCGCGA+TGG + chr2.1:65665525-65665544 None:intergenic 80.0%
! CGGCGCGATGGGCGAGGGCG+AGG + chr2.1:65665513-65665532 None:intergenic 85.0%
! GCCCATCGCGCCGCCGCCGA+TGG - chr2.1:65665520-65665539 MS.gene002901:CDS 85.0%
! GGCGGCGGCGCGATGGGCGA+GGG + chr2.1:65665518-65665537 None:intergenic 85.0%
! CGGCGGCGGCGCGATGGGCG+AGG + chr2.1:65665519-65665538 None:intergenic 90.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 65665367 65669478 65665367 ID=MS.gene002901
chr2.1 mRNA 65665367 65669478 65665367 ID=MS.gene002901.t1;Parent=MS.gene002901
chr2.1 exon 65668954 65669478 65668954 ID=MS.gene002901.t1.exon1;Parent=MS.gene002901.t1
chr2.1 CDS 65668954 65669478 65668954 ID=cds.MS.gene002901.t1;Parent=MS.gene002901.t1
chr2.1 exon 65667323 65667470 65667323 ID=MS.gene002901.t1.exon2;Parent=MS.gene002901.t1
chr2.1 CDS 65667323 65667470 65667323 ID=cds.MS.gene002901.t1;Parent=MS.gene002901.t1
chr2.1 exon 65666608 65666860 65666608 ID=MS.gene002901.t1.exon3;Parent=MS.gene002901.t1
chr2.1 CDS 65666608 65666860 65666608 ID=cds.MS.gene002901.t1;Parent=MS.gene002901.t1
chr2.1 exon 65665367 65665583 65665367 ID=MS.gene002901.t1.exon4;Parent=MS.gene002901.t1
chr2.1 CDS 65665367 65665583 65665367 ID=cds.MS.gene002901.t1;Parent=MS.gene002901.t1
Gene Sequence

>MS.gene002901

ATGGCCGACGCATTCTTCTCCTTCTTCATCCTCCTCCCTCTCCTCCTCCTCCCCCTCCTCTACTTCCTCGTCCGCCCCCGTCCCATCAAGATCCCAATCACCAACCGCCACGTCTTCATCACCGGTGGCTCAAGCGGCATCGGCCTCGCCCTCGCCCATCGCGCCGCCGCCGATGGTGCACGTGTCTCCATCATGGCACGATCCCTCACGAAACTCGAAGAAGCAAAGAACTCCGTCAAGAACGCTACCGGCGTAGAAGTAGGGATATTCGCAGCGGATGTGAGAGACTATGATGCTGTGAAGAAAGTAGTTGATGAAGCTGGACCCATTGATGTGTTGTTGTTGAATCATGGTGTGTTTTATGCGTTGGAATTGGAGAAAATGGAATTGAGTGATGTGAAGTTTACGATTGATGTTAATTTGATGGGTTGTTTGAATATGATTAAAGCTGCTTTGCCTCAAATGAAGAATAGGAAAGATACTTTACCTGCTTCTATTGCTTTTGTTTCATCACAAGCTGGTCAGGTATGGAATTGGAAATTTTACTGATAAATTATGTTTATTATGGCCATGTTTGGATAAACAGCTTAATTTGAAGTTTATACCAATTATTGTGTGGGATTGATTGACTTTGAAGTTAACTTGTGTATTTCCAATTATGCCGTGACATTGTTTTATGGGGTTTTTAAAATTATGCTAATTTAATTATGCCACTCTAGATGTTTGTTAGAAATCCCCAATGGAGTTATGTTTTTTTTTTTTTTGGAAAAACATAGGAGTGTGGTGACTTATGAAGCTGACTCCATTTTCTATACCTTCCCTATATATCGATTGGCAGCTAAATGAAGTTAATTGGACAATTTTGAGTGCACTTATAGTCGAGTTTTGTCTGCACAAGCCAAAGAAACTATCTATAATTTGATAAGACTTAAGACTCTGATTTTCATTTTCTCTCTGTAATTAACCATGTTTGGAAGAAGTTAATAGATTATTTGTTAGGCTATAGAAGTAAATTTGACTGACACCCATTTGGTTTCTGCACACTATCTAATATCGCTAATAAGCTGGTAGACTTTACTTTAGAGTTGACTTGTTAAAATGAATGGAGAGTGCCCCTACATTGCATGATCAATATGATTGTATTGTCTTTATGTCAGCAAATAATTGAAGCTTATTTGCCATAAAATATAAAACTCAACGGTTTCACATTGCCCTTGCGGTGGCAATTGCAACTATTGAAATGGAAAATGCTTTCACCAACACACTCTACAACAACTCAACGGCAATTTTGGTATGTGGACGGATATACACCCACTATTTGAAACTATTCTAACATAAAGTTTATTATTGGGTGGAATTCATGTTGATCCCATCTTCTGCAAATGGTTGAGCTTAAAGCTCTTACAATGGTGGAAAGATGGGGAAAAAACAGAAGTACACTAGAGTTCTATGAACTCCTACTAGAGCTAGGCTCCTAAACCAGAGAGAAATCTCTCCTAACTGACTCTTGACAACTTTCTTGAATGAATCACTCACTAACCTTCCCACTCTTTATAATAGAAATTCTCCTAGATTTGAGGTAATATCCTAATAACCTTTATTCTCTCACTTTCTACAACCTTATAGAAACTGCACTAGTGTGAATTGGGCCCAATTGGGCTCTCACACGAACTGGACCCTGGTGCTCTATAATCTTCCCTTCTCTTTTTCTTTTGATTTCTTCCCTTCACTTCCTTTGCATTCCAACATCCAAAACATATCATCTGAATCATTAGCTATAGGCAGTGCTATCGAATTGTTATAAGAATGGGCTGCTGTTTTATCCTATTTTTACTTTTAGCATATCAGTTCAACACTTGGCACAAGCAAAACATTATTTTCATTAATATTTTTTTTTACTGTGGTGAAGTATTCATAGTACACTCTTCAAATTTTATAACTCTGATTGTTGATCAAGAGATGATCTAGTGATGTGGTTTTTTATTTTATTTTTTAATGTGGAGTTTAGGTGGGAATTTATGGTTATGTAGCTTATTCGGCCAGTAAATTTGGCCTCCGTGGTTTAGCAGAAGCATTGCAACAAGAGGTTATAGGAGATAATATTCATGTCTCTATGATATTCCCTCCAGACACTGATACTCCTGGACTTGTAGAAGGTAATCAATTGGATAGTTGAGCTTATTTTATCACACATATTAGTATTCCTTTTGGTAATTGATCTATGTTCAGTTTACATCGAAAATGAGGCAAGTAACCTTGGCTAAACAACTCATTAGTTTAGGTCAACCTCAATATGGATGTGGAATCAGGGCCTGCAATTGAAGTGCTTGAACAAACAAGTCTGAAATTATTTAATCTGTGAAACAAATTATGCATCAGTTGCCAAATGATTTTGTTAGTAATTCAATATACAATGTCTTCTTATTAAGTCTAGCTTCCATATTACGAGTGTCTTTGGGTATATAGTATATTGTCATGTAGGAAGTAGGATATTGTTAGCTCAGTCCTAAATTTTCTGATTTTGTCATGCCAAGTACCATTGTGTGCCATCTCGTGGGAAATTTGTCTACTGTAATGTAATCCAAGTTTAAGTACAAACTGAAAGGTTCTTTTTGCAGAAAATAAGAGAAAACCAGAGCTCACCAAAATCATTGCAGCCTCTTCTGGTTTTATGAAAGCCGATGAAGTTGCTCAGAAAGCTTTTGATGGCATAAGACGTGGCAGTTTTATCATTTCTTGCAATTTGGAGGGTATTGCGTTATCCCTAGCAACTTCAGGTTTATCCCCTCAGAGGTCATTCTTAATGGCATTTGTTGAGGTTATTACTGCTGGAATAATGCGTATAGCAGCACTATGTTTCCAGTGGAACTGGTATGGAAGTATAGAGAAGTGGCACAAGCAAAGGAAGTGTAAGTGCTGTTTACTTTTTAAAAACATATTTTGTTTTCATTTTCTAAAATCTGTTGTCAGTTTAAGTTGATAAAAATAAGATGGAAGACTTCTGTAACGAATAATCATGACATAGAGTAGATGGAAGGCTAGTTATAGATATAGTAGTAAATATCCAATTCGCTCCCTTATTTTTATAGGGTGTATCAATTTGGTCCCTTACCTTTATAAAATGTCATGTCAGTCCCTCACTTTGTTGTCACCGGAGTTACATACTGAGTATCAAGTTGTCCCTGAAATTTCATATTTAGTGTCTACTTGGTCCATGAAATTACATACTTGTGTCTATGAAATCCAAGCGATGACAAATACAGGATAAATGGACTAATTTGACAAACTTTCTGCAAAGTGAGAGACCAGCTTAACATTTTATGATAGTGGGAAACTGAATTGACACATCATAGAAAAGTGAGGAACTAAGTTGGGAATTTACTCCTGAACTAAAAGCGTTCTCTAATTATAAGGATCCAAATGGAAACTGTCTAACAAAAGTGGCAAATAAAGTGTAAGTGTACATTGGATGTTAGTCCTTGACAATTTGGTTTGCACGGTCCCTTTGATTTAGGAAACAATACCTTTATATCAAGGCATTTTTTCTAACCCTTAATAATGACTTTCTAAATTTTGGCTTTGGTTACAGTTTAAGAATGGTTCAATCACATTTAAATGAACAATTGATTATTTATGTTCTTATTTACTTTTGCTTTAATGTTTGTTTCCACAAATTTCATGTATTCAGTATTCTGGAGATTGTTCAGAACTTATGTTATCACTCCAATTTATGAATGTGAAGTAGACTGTCTAGAATGATTAATGGTATTAGTATCTGTAGTTTTCTTTCGTAAAATGATGAGTGTGGACCGTCTATGCTGTAAATAAATAGATTTTTTCTATTTAAATGATTCCGGGTATCGTTTGTGAATTTGATGATTTTTTCTTCATACAGGTACACCTCAAAGCACTTGATGCACTCTGAGCTCTATGCTCTGTTAAATGCGAAGCAAATGTGGTCTTCGTCCACTCTGCTCTACGATGAAATTAATTTAGCGAAACTTAAATCATTGTTGACAAATGAGAACTCCATACACATTCAGTTCTTAAACTATGTGGTTTCTGATTTTTATCTCCAGGTACGGGATAGAGTATGTGGTATATCTTGCTGA
Protein sequence

>MS.gene002901.t1

MADAFFSFFILLPLLLLPLLYFLVRPRPIKIPITNRHVFITGGSSGIGLALAHRAAADGARVSIMARSLTKLEEAKNSVKNATGVEVGIFAADVRDYDAVKKVVDEAGPIDVLLLNHGVFYALELEKMELSDVKFTIDVNLMGCLNMIKAALPQMKNRKDTLPASIAFVSSQAGQVGIYGYVAYSASKFGLRGLAEALQQEVIGDNIHVSMIFPPDTDTPGLVEENKRKPELTKIIAASSGFMKADEVAQKAFDGIRRGSFIISCNLEGIALSLATSGLSPQRSFLMAFVEVITAGIMRIAALCFQWNWYTSKHLMHSELYALLNAKQMWSSSTLLYDEINLAKLKSLLTNENSIHIQFLNYVVSDFYLQVRDRVCGISC