AlfalfaGEDB | MS.gene01864

M. sativa cultivar XinJiangDaYe / MS.gene01864

KEGG: K04708
GO: GO:0003674 GO:0003824 GO:0016491
PFAM: PF00106.28

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene01864.t1	KEH36798.1	97.7	257	6	0	1	257	65	321	8.20E-136	493

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene01864.t1	Q0WRJ2	58.6	256	106	0	1	256	69	324	1.9e-77	290.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene01864.t1	A0A072V634	97.7	257	6	0	1	257	65	321	5.9e-136	493.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene01864	MS.gene62620	PPI
MS.gene040151	MS.gene01864	PPI
MS.gene01864	MS.gene047943	PPI
MS.gene01864	MS.gene055528	PPI
MS.gene01864	MS.gene41661	PPI
MS.gene01864	MS.gene53169	PPI
MS.gene01864	MS.gene95889	PPI
MS.gene01864	MS.gene93783	PPI
MS.gene01864	MS.gene002901	PPI
MS.gene01864	MS.gene00863	PPI
MS.gene62620	MS.gene01864	PPI
MS.gene01864	MS.gene55382	PPI
MS.gene01864	MS.gene99693	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene01864.t1	MTR_2g022600	97.665	257	6	0	1	257	65	321	0.0	519
MS.gene01864.t1	MTR_3g098750	89.147	258	13	4	1	257	186	429	3.37e-161	455
MS.gene01864.t1	MTR_0103s0010	92.405	79	6	0	179	257	1	79	2.68e-47	154
MS.gene01864.t1	MTR_6g009130	92.405	79	6	0	179	257	1	79	4.48e-47	155

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene01864.t1	AT3G06060	68.750	256	80	1	256	69	324	3.92e-130	371
MS.gene01864.t1	AT3G06060	68.750	256	80	1	256	86	341	3.97e-130	372
MS.gene01864.t1	AT5G19200	62.646	257	96	1	257	67	323	6.82e-119	343

Find 56 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCTTATTCGGCCAGTAAATT+TGG	0.214786	2.2:-62985369	MS.gene01864:CDS
AGAAGAGGCTGCAATGATTT+TGG	0.223794	2.2:+62984756	None:intergenic
TGCGTTGGAATTGGAGAAAA+TGG	0.239743	2.2:-62987036	MS.gene01864:CDS
GGAGTTTAGGTGGGAATTTA+TGG	0.245092	2.2:-62985399	MS.gene01864:intron
CCCTCAGAGGTCATTCTTAA+TGG	0.249957	2.2:-62984614	MS.gene01864:CDS
TTATGGTTATGTAGCTTATT+CGG	0.295839	2.2:-62985382	MS.gene01864:CDS
ACCACGGAGGCCAAATTTAC+TGG	0.301992	2.2:+62985359	None:intergenic
TACGATTGATGTTAATTTGA+TGG	0.335633	2.2:-62986994	MS.gene01864:CDS
AAAATCATTGCAGCCTCTTC+TGG	0.342665	2.2:-62984754	MS.gene01864:CDS
GCGTTATCCCTAGCAACTTC+AGG	0.363331	2.2:-62984643	MS.gene01864:CDS
CACTATGTTTCCAGTGGAAC+TGG	0.390366	2.2:-62984549	MS.gene01864:CDS
CTTTGCCTCAAATGAAGAAT+AGG	0.390871	2.2:-62986947	MS.gene01864:CDS
TTTGTTGAGGTTATTACTGC+TGG	0.392303	2.2:-62984589	MS.gene01864:CDS
TGTTTCATCACAAGCTGGTC+AGG	0.403214	2.2:-62986895	MS.gene01864:intron
GATGTGTTGTTGTTGAATCA+TGG	0.436317	2.2:-62987068	MS.gene01864:CDS
GATACTCCTGGACTTGTAGA+AGG	0.438678	2.2:-62985264	MS.gene01864:intron
GCATTGCAACAAGAGGTTAT+AGG	0.440395	2.2:-62985327	MS.gene01864:CDS
TCTTTCCTATTCTTCATTTG+AGG	0.444715	2.2:+62986942	None:intergenic
ATTCAACAACAACACATCAA+TGG	0.449590	2.2:+62987073	None:intergenic
TATCATTTCTTGCAATTTGG+AGG	0.451120	2.2:-62984671	MS.gene01864:CDS
TTCAACAACAACACATCAAT+GGG	0.463160	2.2:+62987074	None:intergenic
ACGATTGATGTTAATTTGAT+GGG	0.487967	2.2:-62986993	MS.gene01864:CDS
AACGCTACCGGCGTAGAAGT+AGG	0.491607	2.2:-62987158	MS.gene01864:CDS
GGGATAAACCTGAAGTTGCT+AGG	0.498430	2.2:+62984635	None:intergenic
TGTTTCCAGTGGAACTGGTA+TGG	0.499008	2.2:-62984544	MS.gene01864:CDS
ACGCTACCGGCGTAGAAGTA+GGG	0.501954	2.2:-62987157	MS.gene01864:CDS
AGTCCAGGAGTATCAGTGTC+TGG	0.502012	2.2:+62985273	None:intergenic
TGATTACCTTCTACAAGTCC+AGG	0.503150	2.2:+62985258	None:intergenic
ATTCTTAATGGCATTTGTTG+AGG	0.509829	2.2:-62984602	MS.gene01864:CDS
TGCTTCTTCGAGTTTCGTGA+GGG	0.518995	2.2:+62987196	None:intergenic
CCTCCAGACACTGATACTCC+TGG	0.522898	2.2:-62985276	MS.gene01864:CDS
ATCATTTCTTGCAATTTGGA+GGG	0.526476	2.2:-62984670	MS.gene01864:CDS
TACGCCGGTAGCGTTCTTGA+CGG	0.529338	2.2:+62987166	None:intergenic
CCATTAAGAATGACCTCTGA+GGG	0.529640	2.2:+62984614	None:intergenic
TAGAGAAGTGGCACAAGCAA+AGG	0.532078	2.2:-62984516	MS.gene01864:CDS
GAAACAAAAGCAATAGAAGC+AGG	0.538608	2.2:+62986912	None:intergenic
TACTTCCATACCAGTTCCAC+TGG	0.538704	2.2:+62984539	None:intergenic
AGCAGAAGCATTGCAACAAG+AGG	0.543956	2.2:-62985334	MS.gene01864:CDS
TTGCTTCTTCGAGTTTCGTG+AGG	0.545567	2.2:+62987195	None:intergenic
AACTCCGTCAAGAACGCTAC+CGG	0.545959	2.2:-62987170	MS.gene01864:CDS
GCCAGTAAATTTGGCCTCCG+TGG	0.557668	2.2:-62985360	MS.gene01864:CDS
AGCTTTCTGAGCAACTTCAT+CGG	0.559805	2.2:+62984720	None:intergenic
AAGAAAGTAGTTGATGAAGC+TGG	0.565432	2.2:-62987098	MS.gene01864:CDS
GGATAAACCTGAAGTTGCTA+GGG	0.579338	2.2:+62984636	None:intergenic
GGCTTTCATAAAACCAGAAG+AGG	0.581855	2.2:+62984741	None:intergenic
CAGGAGTATCAGTGTCTGGA+GGG	0.591739	2.2:+62985277	None:intergenic
GAATATCCCTACTTCTACGC+CGG	0.630276	2.2:+62987151	None:intergenic
GGTATGGAAGTATAGAGAAG+TGG	0.632472	2.2:-62984528	MS.gene01864:CDS
CCAGGAGTATCAGTGTCTGG+AGG	0.642770	2.2:+62985276	None:intergenic
TAGCAGCACTATGTTTCCAG+TGG	0.655763	2.2:-62984555	MS.gene01864:CDS
GCCATTAAGAATGACCTCTG+AGG	0.666181	2.2:+62984613	None:intergenic
CTTCAGGTTTATCCCCTCAG+AGG	0.666800	2.2:-62984627	MS.gene01864:CDS
GCAATGCTTCTGCTAAACCA+CGG	0.698466	2.2:+62985343	None:intergenic
AGAAGTAGGGATATTCGCAG+CGG	0.746455	2.2:-62987144	MS.gene01864:CDS
CATTAAGAATGACCTCTGAG+GGG	0.759100	2.2:+62984615	None:intergenic
ATGCTTCTGCTAAACCACGG+AGG	0.773999	2.2:+62985346	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AGTTATGTTTTTTTTTTTTT+TGG	-	chr2.2:62985063-62985082	MS.gene01864:intron	10.0%
!!!	ATTAATATTTTTTTTTACTG+TGG	-	chr2.2:62986201-62986220	MS.gene01864:intron	10.0%
!!	AAGTTAATAGATTATTTGTT+AGG	-	chr2.2:62985297-62985316	MS.gene01864:CDS	15.0%
!!	CTAACATAAAGTTTATTATT+GGG	-	chr2.2:62985649-62985668	MS.gene01864:intron	15.0%
!!	CTGATAAATTATGTTTATTA+TGG	-	chr2.2:62984865-62984884	MS.gene01864:intron	15.0%
!!	TCTAACATAAAGTTTATTAT+TGG	-	chr2.2:62985648-62985667	MS.gene01864:intron	15.0%
!!!	TTTTTTTTTTGGAAAAACAT+AGG	-	chr2.2:62985074-62985093	MS.gene01864:intron	15.0%
!!	AAAAAAAAACATAACTCCAT+TGG	+	chr2.2:62985059-62985078	None:intergenic	20.0%
!!	AAAAAAAACATAACTCCATT+GGG	+	chr2.2:62985058-62985077	None:intergenic	20.0%
!!	AAATCAAAAGAAAAAGAGAA+GGG	+	chr2.2:62986019-62986038	None:intergenic	20.0%
!!	AGAATTTCTATTATAAAGAG+TGG	+	chr2.2:62985867-62985886	None:intergenic	20.0%
!!	ATGACAAAATCAGAAAATTT+AGG	+	chr2.2:62986828-62986847	None:intergenic	20.0%
!!	CAAATTATAGATAGTTTCTT+TGG	+	chr2.2:62985221-62985240	None:intergenic	20.0%
!!	CCATAAAATATAAAACTCAA+CGG	-	chr2.2:62985498-62985517	MS.gene01864:intron	20.0%
!!	GAATTACTAACAAAATCATT+TGG	+	chr2.2:62986705-62986724	None:intergenic	20.0%
!!	GAATTTCTATTATAAAGAGT+GGG	+	chr2.2:62985866-62985885	None:intergenic	20.0%
!!	GATATGCTAAAAGTAAAAAT+AGG	+	chr2.2:62986146-62986165	None:intergenic	20.0%
!!	TATATAGTATATTGTCATGT+AGG	-	chr2.2:62986779-62986798	MS.gene01864:intron	20.0%
!!	TATCGAATTGTTATAAGAAT+GGG	-	chr2.2:62986108-62986127	MS.gene01864:intron	20.0%
!!	TTAGAATAGTTTCAAATAGT+GGG	+	chr2.2:62985633-62985652	None:intergenic	20.0%
!!!	TATTTTTTAATGTGGAGTTT+AGG	-	chr2.2:62986306-62986325	MS.gene01864:intron	20.0%
!!!	TTTTATCATTTCTTGCAATT+TGG	-	chr2.2:62987044-62987063	MS.gene01864:CDS	20.0%
!	AAAAAAACATAACTCCATTG+GGG	+	chr2.2:62985057-62985076	None:intergenic	25.0%
!	AACATAGATCAATTACCAAA+AGG	+	chr2.2:62986526-62986545	None:intergenic	25.0%
!	AAGTTTAAGTACAAACTGAA+AGG	-	chr2.2:62986903-62986922	MS.gene01864:CDS	25.0%
!	ACATAAAGTTTATTATTGGG+TGG	-	chr2.2:62985652-62985671	MS.gene01864:intron	25.0%
!	AGTTTATACCAATTATTGTG+TGG	-	chr2.2:62984916-62984935	MS.gene01864:intron	25.0%
!	CTATCGAATTGTTATAAGAA+TGG	-	chr2.2:62986107-62986126	MS.gene01864:intron	25.0%
!	GAAATCAAAAGAAAAAGAGA+AGG	+	chr2.2:62986020-62986039	None:intergenic	25.0%
!	GTTAGAATAGTTTCAAATAG+TGG	+	chr2.2:62985634-62985653	None:intergenic	25.0%
!	GTTTATACCAATTATTGTGT+GGG	-	chr2.2:62984917-62984936	MS.gene01864:intron	25.0%
!	TTATGGTTATGTAGCTTATT+CGG	-	chr2.2:62986336-62986355	MS.gene01864:intron	25.0%
!	TTTCAGTTTGTACTTAAACT+TGG	+	chr2.2:62986904-62986923	None:intergenic	25.0%
!!	ACACATATTAGTATTCCTTT+TGG	-	chr2.2:62986508-62986527	MS.gene01864:intron	25.0%
!!	ACGATTGATGTTAATTTGAT+GGG	-	chr2.2:62984725-62984744	MS.gene01864:CDS	25.0%
!!	ATGATTCAGATGATATGTTT+TGG	+	chr2.2:62986072-62986091	None:intergenic	25.0%
!!	TACGATTGATGTTAATTTGA+TGG	-	chr2.2:62984724-62984743	MS.gene01864:CDS	25.0%
!!!	AGTTGACTTGTTAAAATGAA+TGG	-	chr2.2:62985403-62985422	MS.gene01864:intron	25.0%
!!!	CCGTTGAGTTTTATATTTTA+TGG	+	chr2.2:62985501-62985520	None:intergenic	25.0%
	AATCAATCCCACACAATAAT+TGG	+	chr2.2:62984927-62984946	None:intergenic	30.0%
	ACTTGTAGAAGGTAATCAAT+TGG	-	chr2.2:62986465-62986484	MS.gene01864:intron	30.0%
	ATATTGATCATGCAATGTAG+GGG	+	chr2.2:62985435-62985454	None:intergenic	30.0%
	ATCATTTCTTGCAATTTGGA+GGG	-	chr2.2:62987048-62987067	MS.gene01864:CDS	30.0%
	ATCTAATATCGCTAATAAGC+TGG	-	chr2.2:62985365-62985384	MS.gene01864:CDS	30.0%
	ATGTTTATTATGGCCATGTT+TGG	-	chr2.2:62984875-62984894	MS.gene01864:intron	30.0%
	ATTCAACAACAACACATCAA+TGG	+	chr2.2:62984648-62984667	None:intergenic	30.0%
	CATATTGATCATGCAATGTA+GGG	+	chr2.2:62985436-62985455	None:intergenic	30.0%
	CTATTAACTTCTTCCAAACA+TGG	+	chr2.2:62985287-62985306	None:intergenic	30.0%
	GTGAGAGAATAAAGGTTATT+AGG	+	chr2.2:62985909-62985928	None:intergenic	30.0%
	TAGAAATTCTCCTAGATTTG+AGG	-	chr2.2:62985877-62985896	MS.gene01864:intron	30.0%
	TAGGATATTACCTCAAATCT+AGG	+	chr2.2:62985890-62985909	None:intergenic	30.0%
	TATATTGTCATGTAGGAAGT+AGG	-	chr2.2:62986786-62986805	MS.gene01864:intron	30.0%
	TATCATTTCTTGCAATTTGG+AGG	-	chr2.2:62987047-62987066	MS.gene01864:CDS	30.0%
	TCATATTGATCATGCAATGT+AGG	+	chr2.2:62985437-62985456	None:intergenic	30.0%
	TCATCTGAATCATTAGCTAT+AGG	-	chr2.2:62986079-62986098	MS.gene01864:intron	30.0%
	TCTCTGTAATTAACCATGTT+TGG	-	chr2.2:62985271-62985290	MS.gene01864:CDS	30.0%
	TCTTTCCTATTCTTCATTTG+AGG	+	chr2.2:62984779-62984798	None:intergenic	30.0%
	TGTAGAAAGTGAGAGAATAA+AGG	+	chr2.2:62985917-62985936	None:intergenic	30.0%
	TTAAGCTGTTTATCCAAACA+TGG	+	chr2.2:62984891-62984910	None:intergenic	30.0%
	TTCAACAACAACACATCAAT+GGG	+	chr2.2:62984647-62984666	None:intergenic	30.0%
	TTCAGTTTACATCGAAAATG+AGG	-	chr2.2:62986544-62986563	MS.gene01864:intron	30.0%
	TTCTATTATAAAGAGTGGGA+AGG	+	chr2.2:62985862-62985881	None:intergenic	30.0%
	TTTCTAACAAACATCTAGAG+TGG	+	chr2.2:62985033-62985052	None:intergenic	30.0%
!	ATTCTTAATGGCATTTGTTG+AGG	-	chr2.2:62987116-62987135	MS.gene01864:CDS	30.0%
!	GCTAAACAACTCATTAGTTT+AGG	-	chr2.2:62986579-62986598	MS.gene01864:intron	30.0%
!	TATAGGGAAGGTATAGAAAA+TGG	+	chr2.2:62985125-62985144	None:intergenic	30.0%
!	TTTTAATGTGGAGTTTAGGT+GGG	-	chr2.2:62986310-62986329	MS.gene01864:intron	30.0%
!	TTTTTAATGTGGAGTTTAGG+TGG	-	chr2.2:62986309-62986328	MS.gene01864:intron	30.0%
!!	AGATGATATGTTTTGGATGT+TGG	+	chr2.2:62986065-62986084	None:intergenic	30.0%
	AAACAATGTCACGGCATAAT+TGG	+	chr2.2:62984975-62984994	None:intergenic	35.0%
	AAACTGCACTAGTGTGAATT+GGG	-	chr2.2:62985946-62985965	MS.gene01864:intron	35.0%
	AAAGTTGTCAAGAGTCAGTT+AGG	+	chr2.2:62985818-62985837	None:intergenic	35.0%
	AAATTTGACTGACACCCATT+TGG	-	chr2.2:62985330-62985349	MS.gene01864:CDS	35.0%
	AACCCCATAAAACAATGTCA+CGG	+	chr2.2:62984984-62985003	None:intergenic	35.0%
	ACACTAGTGCAGTTTCTATA+AGG	+	chr2.2:62985941-62985960	None:intergenic	35.0%
	ACTAATGAGTTGTTTAGCCA+AGG	+	chr2.2:62986577-62986596	None:intergenic	35.0%
	AGTTTAGGTCAACCTCAATA+TGG	-	chr2.2:62986594-62986613	MS.gene01864:intron	35.0%
	ATAGTGTGCAGAAACCAAAT+GGG	+	chr2.2:62985347-62985366	None:intergenic	35.0%
	CTTTGCCTCAAATGAAGAAT+AGG	-	chr2.2:62984771-62984790	MS.gene01864:CDS	35.0%
	GAAACAAAAGCAATAGAAGC+AGG	+	chr2.2:62984809-62984828	None:intergenic	35.0%
	GGCAATTGCAACTATTGAAA+TGG	-	chr2.2:62985541-62985560	MS.gene01864:intron	35.0%
	GGCAGCTAAATGAAGTTAAT+TGG	-	chr2.2:62985153-62985172	MS.gene01864:intron	35.0%
	TACCTTCCCTATATATCGAT+TGG	-	chr2.2:62985132-62985151	MS.gene01864:intron	35.0%
	TAGCATATCAGTTCAACACT+TGG	-	chr2.2:62986157-62986176	MS.gene01864:intron	35.0%
	TAGCTGCCAATCGATATATA+GGG	+	chr2.2:62985141-62985160	None:intergenic	35.0%
	TCAATATGGATGTGGAATCA+GGG	-	chr2.2:62986608-62986627	MS.gene01864:intron	35.0%
	TCCATATTACGAGTGTCTTT+GGG	-	chr2.2:62986756-62986775	MS.gene01864:intron	35.0%
	TGAGCTTAAAGCTCTTACAA+TGG	-	chr2.2:62985707-62985726	MS.gene01864:intron	35.0%
	TTAGCTGCCAATCGATATAT+AGG	+	chr2.2:62985142-62985161	None:intergenic	35.0%
	TTCCATATTACGAGTGTCTT+TGG	-	chr2.2:62986755-62986774	MS.gene01864:intron	35.0%
	TTTGGAAAAACATAGGAGTG+TGG	-	chr2.2:62985081-62985100	MS.gene01864:intron	35.0%
	TTTGTTGAGGTTATTACTGC+TGG	-	chr2.2:62987129-62987148	MS.gene01864:CDS	35.0%
!	GATGTGTTGTTGTTGAATCA+TGG	-	chr2.2:62984650-62984669	MS.gene01864:CDS	35.0%
!	TCTTACAATGGTGGAAAGAT+GGG	-	chr2.2:62985719-62985738	MS.gene01864:intron	35.0%
!	TGTGTTTTATGCGTTGGAAT+TGG	-	chr2.2:62984673-62984692	MS.gene01864:CDS	35.0%
!	TGTTTGTTAGAAATCCCCAA+TGG	-	chr2.2:62985040-62985059	MS.gene01864:intron	35.0%
!	TTTTGGATGTTGGAATGCAA+AGG	+	chr2.2:62986055-62986074	None:intergenic	35.0%
!!	AAGAAAGTAGTTGATGAAGC+TGG	-	chr2.2:62984620-62984639	MS.gene01864:CDS	35.0%
!!	ATGCCGTGACATTGTTTTAT+GGG	-	chr2.2:62984978-62984997	MS.gene01864:intron	35.0%
!!	TATGCCGTGACATTGTTTTA+TGG	-	chr2.2:62984977-62984996	MS.gene01864:intron	35.0%
	AAAATCATTGCAGCCTCTTC+TGG	-	chr2.2:62986964-62986983	MS.gene01864:CDS	40.0%
	ACCCAAAGACACTCGTAATA+TGG	+	chr2.2:62986760-62986779	None:intergenic	40.0%
	AGCTTTCTGAGCAACTTCAT+CGG	+	chr2.2:62987001-62987020	None:intergenic	40.0%
	AGTTAGGAGAGATTTCTCTC+TGG	+	chr2.2:62985802-62985821	None:intergenic	40.0%
	CAAGAGATGATCTAGTGATG+TGG	-	chr2.2:62986273-62986292	MS.gene01864:intron	40.0%
	CACACTCTACAACAACTCAA+CGG	-	chr2.2:62985580-62985599	MS.gene01864:intron	40.0%
	CATTAAGAATGACCTCTGAG+GGG	+	chr2.2:62987106-62987125	None:intergenic	40.0%
	CCATTAAGAATGACCTCTGA+GGG	+	chr2.2:62987107-62987126	None:intergenic	40.0%
	CTCAACCATTTGCAGAAGAT+GGG	+	chr2.2:62985691-62985710	None:intergenic	40.0%
	CTCAATATGGATGTGGAATC+AGG	-	chr2.2:62986607-62986626	MS.gene01864:intron	40.0%
	CTGATTCCACATCCATATTG+AGG	+	chr2.2:62986609-62986628	None:intergenic	40.0%
	GAAAATGAGGCAAGTAACCT+TGG	-	chr2.2:62986557-62986576	MS.gene01864:intron	40.0%
	GAAACTGCACTAGTGTGAAT+TGG	-	chr2.2:62985945-62985964	MS.gene01864:intron	40.0%
	GATAGTGTGCAGAAACCAAA+TGG	+	chr2.2:62985348-62985367	None:intergenic	40.0%
	GCATTGCAACAAGAGGTTAT+AGG	-	chr2.2:62986391-62986410	MS.gene01864:intron	40.0%
	GCTTAAAGCTCTTACAATGG+TGG	-	chr2.2:62985710-62985729	MS.gene01864:intron	40.0%
	GCTTATTCGGCCAGTAAATT+TGG	-	chr2.2:62986349-62986368	MS.gene01864:intron	40.0%
	GGAGTTTAGGTGGGAATTTA+TGG	-	chr2.2:62986319-62986338	MS.gene01864:intron	40.0%
	GGATAAACCTGAAGTTGCTA+GGG	+	chr2.2:62987085-62987104	None:intergenic	40.0%
	GGCTTTCATAAAACCAGAAG+AGG	+	chr2.2:62986980-62986999	None:intergenic	40.0%
	TAGACAAATTTCCCACGAGA+TGG	+	chr2.2:62986869-62986888	None:intergenic	40.0%
	TATGAACTCCTACTAGAGCT+AGG	-	chr2.2:62985768-62985787	MS.gene01864:intron	40.0%
	TGAGTTGTTGTAGAGTGTGT+TGG	+	chr2.2:62985579-62985598	None:intergenic	40.0%
	TGATTACCTTCTACAAGTCC+AGG	+	chr2.2:62986463-62986482	None:intergenic	40.0%
	TGCCAATCGATATATAGGGA+AGG	+	chr2.2:62985137-62985156	None:intergenic	40.0%
	TGCGTTGGAATTGGAGAAAA+TGG	-	chr2.2:62984682-62984701	MS.gene01864:CDS	40.0%
	TGGAATGCAAAGGAAGTGAA+GGG	+	chr2.2:62986045-62986064	None:intergenic	40.0%
	TGTTCAAGCACTTCAATTGC+AGG	+	chr2.2:62986634-62986653	None:intergenic	40.0%
	TTGATCCCATCTTCTGCAAA+TGG	-	chr2.2:62985683-62985702	MS.gene01864:intron	40.0%
	TTGGAATGCAAAGGAAGTGA+AGG	+	chr2.2:62986046-62986065	None:intergenic	40.0%
!	AGAAGAGGCTGCAATGATTT+TGG	+	chr2.2:62986965-62986984	None:intergenic	40.0%
!	CAACAACTCAACGGCAATTT+TGG	-	chr2.2:62985589-62985608	MS.gene01864:intron	40.0%
!	CTCTTACAATGGTGGAAAGA+TGG	-	chr2.2:62985718-62985737	MS.gene01864:intron	40.0%
!	CTTACAATGGTGGAAAGATG+GGG	-	chr2.2:62985720-62985739	MS.gene01864:intron	40.0%
!	GAGAGATTTCTCTCTGGTTT+AGG	+	chr2.2:62985796-62985815	None:intergenic	40.0%
!	GGTATGGAAGTATAGAGAAG+TGG	-	chr2.2:62987190-62987209	MS.gene01864:CDS	40.0%
!	GTTGCTCAGAAAGCTTTTGA+TGG	-	chr2.2:62987006-62987025	MS.gene01864:CDS	40.0%
!	TCATGGTGTGTTTTATGCGT+TGG	-	chr2.2:62984667-62984686	MS.gene01864:CDS	40.0%
!!	GCTTTTGTTTCATCACAAGC+TGG	-	chr2.2:62984818-62984837	MS.gene01864:intron	40.0%
!!	TCAACGGCAATTTTGGTATG+TGG	-	chr2.2:62985596-62985615	MS.gene01864:intron	40.0%
!!	TGCCGTGACATTGTTTTATG+GGG	-	chr2.2:62984979-62984998	MS.gene01864:intron	40.0%
	AAGCTGGTCAGGTATGGAAT+TGG	-	chr2.2:62984834-62984853	MS.gene01864:intron	45.0%
	AGAAGTAGGGATATTCGCAG+CGG	-	chr2.2:62984574-62984593	MS.gene01864:CDS	45.0%
	AGATGGCACACAATGGTACT+TGG	+	chr2.2:62986852-62986871	None:intergenic	45.0%
	AGTGTGAATTGGGCCCAATT+GGG	-	chr2.2:62985956-62985975	MS.gene01864:intron	45.0%
	CACTATGTTTCCAGTGGAAC+TGG	-	chr2.2:62987169-62987188	MS.gene01864:CDS	45.0%
	CCCTCAGAGGTCATTCTTAA+TGG	-	chr2.2:62987104-62987123	MS.gene01864:CDS	45.0%
	GAATATCCCTACTTCTACGC+CGG	+	chr2.2:62984570-62984589	None:intergenic	45.0%
	GATACTCCTGGACTTGTAGA+AGG	-	chr2.2:62986454-62986473	MS.gene01864:intron	45.0%
	GCAATGCTTCTGCTAAACCA+CGG	+	chr2.2:62986378-62986397	None:intergenic	45.0%
	GCCATTAAGAATGACCTCTG+AGG	+	chr2.2:62987108-62987127	None:intergenic	45.0%
	GCTCAACCATTTGCAGAAGA+TGG	+	chr2.2:62985692-62985711	None:intergenic	45.0%
	GGGATAAACCTGAAGTTGCT+AGG	+	chr2.2:62987086-62987105	None:intergenic	45.0%
	GGTCAACCTCAATATGGATG+TGG	-	chr2.2:62986600-62986619	MS.gene01864:intron	45.0%
	TACTTCCATACCAGTTCCAC+TGG	+	chr2.2:62987182-62987201	None:intergenic	45.0%
	TAGAGAAGTGGCACAAGCAA+AGG	-	chr2.2:62987202-62987221	MS.gene01864:CDS	45.0%
	TAGCAGCACTATGTTTCCAG+TGG	-	chr2.2:62987163-62987182	MS.gene01864:CDS	45.0%
	TAGTGTGAATTGGGCCCAAT+TGG	-	chr2.2:62985955-62985974	MS.gene01864:intron	45.0%
	TGTTTCATCACAAGCTGGTC+AGG	-	chr2.2:62984823-62984842	MS.gene01864:intron	45.0%
	TGTTTCCAGTGGAACTGGTA+TGG	-	chr2.2:62987174-62987193	MS.gene01864:CDS	45.0%
!	AGGGAAGATTATAGAGCACC+AGG	+	chr2.2:62986000-62986019	None:intergenic	45.0%
!	GGGAAGATTATAGAGCACCA+GGG	+	chr2.2:62985999-62986018	None:intergenic	45.0%
!	TGCTTCTTCGAGTTTCGTGA+GGG	+	chr2.2:62984525-62984544	None:intergenic	45.0%
!	TTGCTTCTTCGAGTTTCGTG+AGG	+	chr2.2:62984526-62984545	None:intergenic	45.0%
!!	AGCAGAAGCATTGCAACAAG+AGG	-	chr2.2:62986384-62986403	MS.gene01864:intron	45.0%
!!	CGGCAATTTTGGTATGTGGA+CGG	-	chr2.2:62985600-62985619	MS.gene01864:intron	45.0%
!!	GCAATGATTTTGGTGAGCTC+TGG	+	chr2.2:62986955-62986974	None:intergenic	45.0%
!!	GCTTTTGATGGCATAAGACG+TGG	-	chr2.2:62987018-62987037	MS.gene01864:CDS	45.0%
!!	TTTAGGAGCCTAGCTCTAGT+AGG	+	chr2.2:62985779-62985798	None:intergenic	45.0%
!!!	TTTTATTTTATTTTTTAATG+TGG	-	chr2.2:62986298-62986317	MS.gene01864:intron	5.0%
	AACTCCGTCAAGAACGCTAC+CGG	-	chr2.2:62984548-62984567	MS.gene01864:CDS	50.0%
	AATTGGGCTCTCACACGAAC+TGG	-	chr2.2:62985972-62985991	MS.gene01864:intron	50.0%
	ACCACGGAGGCCAAATTTAC+TGG	+	chr2.2:62986362-62986381	None:intergenic	50.0%
	ACCATTGTGTGCCATCTCGT+GGG	-	chr2.2:62986855-62986874	MS.gene01864:intron	50.0%
	ACGGTTTCACATTGCCCTTG+CGG	-	chr2.2:62985517-62985536	MS.gene01864:intron	50.0%
	AGTTCGTGTGAGAGCCCAAT+TGG	+	chr2.2:62985973-62985992	None:intergenic	50.0%
	AGTTGCAATTGCCACCGCAA+GGG	+	chr2.2:62985534-62985553	None:intergenic	50.0%
	ATGCTTCTGCTAAACCACGG+AGG	+	chr2.2:62986375-62986394	None:intergenic	50.0%
	CATCACAAGCTGGTCAGGTA+TGG	-	chr2.2:62984828-62984847	MS.gene01864:intron	50.0%
	GCGTTATCCCTAGCAACTTC+AGG	-	chr2.2:62987075-62987094	MS.gene01864:CDS	50.0%
	GTTCGTGTGAGAGCCCAATT+GGG	+	chr2.2:62985972-62985991	None:intergenic	50.0%
	TACCATTGTGTGCCATCTCG+TGG	-	chr2.2:62986854-62986873	MS.gene01864:intron	50.0%
	TAGTTGCAATTGCCACCGCA+AGG	+	chr2.2:62985535-62985554	None:intergenic	50.0%
!	CTTCAGGTTTATCCCCTCAG+AGG	-	chr2.2:62987091-62987110	MS.gene01864:CDS	50.0%
!!	AGTCCAGGAGTATCAGTGTC+TGG	+	chr2.2:62986448-62986467	None:intergenic	50.0%
!!	CAGGAGTATCAGTGTCTGGA+GGG	+	chr2.2:62986444-62986463	None:intergenic	50.0%
	AACGCTACCGGCGTAGAAGT+AGG	-	chr2.2:62984560-62984579	MS.gene01864:CDS	55.0%
	ACGCTACCGGCGTAGAAGTA+GGG	-	chr2.2:62984561-62984580	MS.gene01864:CDS	55.0%
	CCTCCAGACACTGATACTCC+TGG	-	chr2.2:62986442-62986461	MS.gene01864:intron	55.0%
	GCCAGTAAATTTGGCCTCCG+TGG	-	chr2.2:62986358-62986377	MS.gene01864:intron	55.0%
	GTTTCACATTGCCCTTGCGG+TGG	-	chr2.2:62985520-62985539	MS.gene01864:intron	55.0%
	TACGCCGGTAGCGTTCTTGA+CGG	+	chr2.2:62984555-62984574	None:intergenic	55.0%
	TCCCACGAGATGGCACACAA+TGG	+	chr2.2:62986859-62986878	None:intergenic	55.0%
!!	CCAGGAGTATCAGTGTCTGG+AGG	+	chr2.2:62986445-62986464	None:intergenic	55.0%
	CTCTCACACGAACTGGACCC+TGG	-	chr2.2:62985979-62985998	MS.gene01864:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.2	gene	62984512	62987228	62984512	ID=MS.gene01864
chr2.2	mRNA	62984512	62987228	62984512	ID=MS.gene01864.t1;Parent=MS.gene01864
chr2.2	exon	62986896	62987228	62986896	ID=MS.gene01864.t1.exon1;Parent=MS.gene01864.t1
chr2.2	CDS	62986896	62987228	62986896	ID=cds.MS.gene01864.t1;Parent=MS.gene01864.t1
chr2.2	exon	62985265	62985412	62985265	ID=MS.gene01864.t1.exon2;Parent=MS.gene01864.t1
chr2.2	CDS	62985265	62985412	62985265	ID=cds.MS.gene01864.t1;Parent=MS.gene01864.t1
chr2.2	exon	62984512	62984802	62984512	ID=MS.gene01864.t1.exon3;Parent=MS.gene01864.t1
chr2.2	CDS	62984512	62984802	62984512	ID=cds.MS.gene01864.t1;Parent=MS.gene01864.t1

Gene Sequence

>MS.gene01864

ATGGCACGATCCCTCACGAAACTCGAAGAAGCAAAGAACTCCGTCAAGAACGCTACCGGCGTAGAAGTAGGGATATTCGCAGCGGATGTGAGAGACTATGATGCTGTGAAGAAAGTAGTTGATGAAGCTGGACCCATTGATGTGTTGTTGTTGAATCATGGTGTGTTTTATGCGTTGGAATTGGAGAAAATGGAATTGAGTGATGTGAAGTTTACGATTGATGTTAATTTGATGGGTTGTTTGAATATGATTAAAGCTGCTTTGCCTCAAATGAAGAATAGGAAAGATACTTTACCTGCTTCTATTGCTTTTGTTTCATCACAAGCTGGTCAGGTATGGAATTGGAAATTTTACTGATAAATTATGTTTATTATGGCCATGTTTGGATAAACAGCTTAATTTGAAGTTTATACCAATTATTGTGTGGGATTGATTGACTTTGAAGTTAACTTGTGTATTTCCAATTATGCCGTGACATTGTTTTATGGGGTTTTTAAAATTATGCTAATTTAATTATGCCACTCTAGATGTTTGTTAGAAATCCCCAATGGAGTTATGTTTTTTTTTTTTTTGGAAAAACATAGGAGTGTGGTGACTTATGAAGCTGACTCCATTTTCTATACCTTCCCTATATATCGATTGGCAGCTAAATGAAGTTAATTGGACAATTTTGAGTGCACTTATAGTCGAGTTTTGTCTGCACAAGCCAAAGAAACTATCTATAATTTGATAAGACTTAAGACTCTGATTTTCATTTTCTCTCTGTAATTAACCATGTTTGGAAGAAGTTAATAGATTATTTGTTAGGCTATAGAAGTAAATTTGACTGACACCCATTTGGTTTCTGCACACTATCTAATATCGCTAATAAGCTGGTAGACTTTACTTTAGAGTTGACTTGTTAAAATGAATGGAGAGTGCCCCTACATTGCATGATCAATATGATTGTATTGTCTTTATGTCAGCAAATAATTGAAGCTTATTTGCCATAAAATATAAAACTCAACGGTTTCACATTGCCCTTGCGGTGGCAATTGCAACTATTGAAATGGAAAATGCTTTCACCAACACACTCTACAACAACTCAACGGCAATTTTGGTATGTGGACGGATATACACCCACTATTTGAAACTATTCTAACATAAAGTTTATTATTGGGTGGAATTCATGTTGATCCCATCTTCTGCAAATGGTTGAGCTTAAAGCTCTTACAATGGTGGAAAGATGGGGAAAAAACAGAAGTACACTAGAGTTCTATGAACTCCTACTAGAGCTAGGCTCCTAAACCAGAGAGAAATCTCTCCTAACTGACTCTTGACAACTTTCTTGAATGAATCACTCACTAACCTTCCCACTCTTTATAATAGAAATTCTCCTAGATTTGAGGTAATATCCTAATAACCTTTATTCTCTCACTTTCTACAACCTTATAGAAACTGCACTAGTGTGAATTGGGCCCAATTGGGCTCTCACACGAACTGGACCCTGGTGCTCTATAATCTTCCCTTCTCTTTTTCTTTTGATTTCTTCCCTTCACTTCCTTTGCATTCCAACATCCAAAACATATCATCTGAATCATTAGCTATAGGCAGTGCTATCGAATTGTTATAAGAATGGGCTGCTGTTTTATCCTATTTTTACTTTTAGCATATCAGTTCAACACTTGGCACAAGCAAAACATTATTTTCATTAATATTTTTTTTTACTGTGGTGAAGTATTCATAGTACACTCTTCAAATTTTATAACTCTGATTGTTGATCAAGAGATGATCTAGTGATGTGGTTTTTTATTTTATTTTTTAATGTGGAGTTTAGGTGGGAATTTATGGTTATGTAGCTTATTCGGCCAGTAAATTTGGCCTCCGTGGTTTAGCAGAAGCATTGCAACAAGAGGTTATAGGAGATAATATTCATGTCTCTATGATATTCCCTCCAGACACTGATACTCCTGGACTTGTAGAAGGTAATCAATTGGATAGTTGAGCTTATTTTATCACACATATTAGTATTCCTTTTGGTAATTGATCTATGTTCAGTTTACATCGAAAATGAGGCAAGTAACCTTGGCTAAACAACTCATTAGTTTAGGTCAACCTCAATATGGATGTGGAATCAGGGCCTGCAATTGAAGTGCTTGAACAAACAAGTCTGAAATTATTTAATCTGTGAAACAAATTATGCATCAGTTGCCAAATGATTTTGTTAGTAATTCAATATACAATGTCTTCTTATTAAGTCTAGCTTCCATATTACGAGTGTCTTTGGGTATATAGTATATTGTCATGTAGGAAGTAGGATATTGTTAGCTCAGTCCTAAATTTTCTGATTTTGTCATGCCAAGTACCATTGTGTGCCATCTCGTGGGAAATTTGTCTACTGTAATGTAATCCAAGTTTAAGTACAAACTGAAAGGTTCTTTTTGCAGAAAATAAGAGAAAACCAGAGCTCACCAAAATCATTGCAGCCTCTTCTGGTTTTATGAAAGCCGATGAAGTTGCTCAGAAAGCTTTTGATGGCATAAGACGTGGCAGTTTTATCATTTCTTGCAATTTGGAGGGTATTGCGTTATCCCTAGCAACTTCAGGTTTATCCCCTCAGAGGTCATTCTTAATGGCATTTGTTGAGGTTATTACTGCTGGAATAATGCGTATAGCAGCACTATGTTTCCAGTGGAACTGGTATGGAAGTATAGAGAAGTGGCACAAGCAAAGGAAGT

Protein sequence

>MS.gene01864.t1

MARSLTKLEEAKNSVKNATGVEVGIFAADVRDYDAVKKVVDEAGPIDVLLLNHGVFYALELEKMELSDVKFTIDVNLMGCLNMIKAALPQMKNRKDTLPASIAFVSSQAGQVGIYGYVAYSASKFGLRGLAEALQQEVIGDNIHVSMIFPPDTDTPGLVEENKRKPELTKIIAASSGFMKADEVAQKAFDGIRRGSFIISCNLEGIALSLATSGLSPQRSFLMAFVEVITAGIMRIAALCFQWNWYGSIEKWHKQRK