Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047943.t1 | XP_024633187.1 | 98.8 | 323 | 4 | 0 | 1 | 323 | 1 | 323 | 8.10E-173 | 616.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047943.t1 | Q0WRJ2 | 63.3 | 297 | 109 | 0 | 24 | 320 | 28 | 324 | 6.6e-99 | 362.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047943.t1 | A0A396JBD3 | 98.8 | 323 | 4 | 0 | 1 | 323 | 1 | 323 | 5.8e-173 | 616.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene055528 | MS.gene047943 | PPI |
| MS.gene00863 | MS.gene047943 | PPI |
| MS.gene047943 | MS.gene53169 | PPI |
| MS.gene047943 | MS.gene002901 | PPI |
| MS.gene62620 | MS.gene047943 | PPI |
| MS.gene01864 | MS.gene047943 | PPI |
| MS.gene047943 | MS.gene93783 | PPI |
| MS.gene047943 | MS.gene99693 | PPI |
| MS.gene040151 | MS.gene047943 | PPI |
| MS.gene95889 | MS.gene047943 | PPI |
| MS.gene55382 | MS.gene047943 | PPI |
| MS.gene047943 | MS.gene41661 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047943.t1 | MTR_2g022600 | 98.754 | 321 | 4 | 0 | 1 | 321 | 1 | 321 | 0.0 | 648 |
| MS.gene047943.t1 | MTR_3g098750 | 90.132 | 304 | 15 | 4 | 21 | 323 | 142 | 431 | 0.0 | 541 |
| MS.gene047943.t1 | MTR_0103s0010 | 92.405 | 79 | 6 | 0 | 243 | 321 | 1 | 79 | 2.14e-46 | 154 |
| MS.gene047943.t1 | MTR_6g009130 | 92.405 | 79 | 6 | 0 | 243 | 321 | 1 | 79 | 3.69e-46 | 155 |
| MS.gene047943.t1 | MTR_7g080410 | 31.148 | 244 | 141 | 8 | 22 | 245 | 27 | 263 | 8.76e-17 | 80.1 |
| MS.gene047943.t1 | MTR_7g080410 | 31.148 | 244 | 141 | 8 | 22 | 245 | 27 | 263 | 1.27e-16 | 79.3 |
| MS.gene047943.t1 | MTR_8g096620 | 30.180 | 222 | 132 | 7 | 33 | 247 | 45 | 250 | 7.92e-16 | 77.8 |
| MS.gene047943.t1 | MTR_1196s0010 | 33.333 | 207 | 123 | 6 | 22 | 221 | 262 | 460 | 2.65e-14 | 73.9 |
| MS.gene047943.t1 | MTR_3g085740 | 33.880 | 183 | 110 | 5 | 38 | 214 | 80 | 257 | 1.14e-13 | 70.9 |
| MS.gene047943.t1 | MTR_3g087850 | 31.868 | 182 | 110 | 5 | 38 | 214 | 31 | 203 | 1.48e-11 | 64.7 |
| MS.gene047943.t1 | MTR_8g096580 | 28.070 | 228 | 143 | 7 | 9 | 226 | 17 | 233 | 1.69e-11 | 64.7 |
| MS.gene047943.t1 | MTR_8g079810 | 25.967 | 181 | 123 | 3 | 40 | 212 | 11 | 188 | 2.62e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047943.t1 | AT3G06060 | 70.032 | 317 | 94 | 1 | 5 | 320 | 8 | 324 | 1.40e-159 | 449 |
| MS.gene047943.t1 | AT3G06060 | 70.032 | 317 | 94 | 1 | 5 | 320 | 25 | 341 | 1.67e-159 | 449 |
| MS.gene047943.t1 | AT5G19200 | 65.033 | 306 | 107 | 0 | 16 | 321 | 18 | 323 | 3.79e-147 | 417 |
| MS.gene047943.t1 | AT3G47350 | 28.390 | 236 | 146 | 7 | 33 | 259 | 44 | 265 | 2.06e-17 | 81.6 |
| MS.gene047943.t1 | AT3G47360 | 27.799 | 259 | 166 | 7 | 9 | 259 | 21 | 266 | 1.33e-16 | 79.3 |
| MS.gene047943.t1 | AT5G50690 | 27.758 | 281 | 164 | 9 | 8 | 264 | 8 | 273 | 3.01e-16 | 78.2 |
| MS.gene047943.t1 | AT5G50590 | 27.758 | 281 | 164 | 9 | 8 | 264 | 8 | 273 | 3.01e-16 | 78.2 |
| MS.gene047943.t1 | AT3G47350 | 27.897 | 233 | 147 | 7 | 33 | 259 | 44 | 261 | 5.10e-16 | 77.8 |
| MS.gene047943.t1 | AT2G29360 | 28.571 | 217 | 145 | 4 | 39 | 250 | 22 | 233 | 3.85e-15 | 74.7 |
| MS.gene047943.t1 | AT5G50600 | 30.729 | 192 | 117 | 5 | 38 | 224 | 50 | 230 | 4.26e-15 | 75.5 |
| MS.gene047943.t1 | AT5G50700 | 30.729 | 192 | 117 | 5 | 38 | 224 | 50 | 230 | 4.26e-15 | 75.5 |
| MS.gene047943.t1 | AT5G50690 | 29.756 | 205 | 128 | 5 | 33 | 232 | 45 | 238 | 5.92e-15 | 73.9 |
| MS.gene047943.t1 | AT5G50590 | 29.756 | 205 | 128 | 5 | 33 | 232 | 45 | 238 | 5.92e-15 | 73.9 |
| MS.gene047943.t1 | AT3G03330 | 29.583 | 240 | 134 | 8 | 33 | 245 | 41 | 272 | 2.95e-13 | 70.1 |
| MS.gene047943.t1 | AT5G65205 | 32.967 | 182 | 108 | 5 | 38 | 214 | 11 | 183 | 7.95e-13 | 68.2 |
| MS.gene047943.t1 | AT2G29370 | 28.218 | 202 | 135 | 4 | 24 | 220 | 8 | 204 | 4.05e-12 | 65.9 |
| MS.gene047943.t1 | AT2G29150 | 31.016 | 187 | 119 | 4 | 39 | 220 | 22 | 203 | 4.75e-12 | 65.9 |
| MS.gene047943.t1 | AT2G29350 | 29.412 | 187 | 123 | 3 | 39 | 220 | 21 | 203 | 1.50e-11 | 63.5 |
| MS.gene047943.t1 | AT2G29350 | 29.412 | 187 | 123 | 3 | 39 | 220 | 21 | 203 | 3.30e-11 | 63.2 |
| MS.gene047943.t1 | AT3G26760 | 29.843 | 191 | 114 | 5 | 40 | 220 | 43 | 223 | 9.61e-11 | 62.4 |
Find 95 sgRNAs with CRISPR-Local
Find 362 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTATTCAGCCAGTAAATT+TGG | 0.172419 | 2.4:-64747704 | MS.gene047943:CDS |
| AGAAGAGGCGGCAATGATTT+TGG | 0.231745 | 2.4:+64747090 | None:intergenic |
| GGAGTTTAGGTGGGAATTTA+TGG | 0.237656 | 2.4:-64747734 | MS.gene047943:intron |
| TGCGTTGGAATTGGAGAAAA+TGG | 0.239743 | 2.4:-64749874 | MS.gene047943:CDS |
| CCCTCAGAGGTCATTCTTAA+TGG | 0.249957 | 2.4:-64746948 | MS.gene047943:CDS |
| ACCACGGAGGCCAAATTTAC+TGG | 0.299819 | 2.4:+64747694 | None:intergenic |
| GTTGGTGATTGGGATCTTGA+TGG | 0.300854 | 2.4:+64750154 | None:intergenic |
| CGGCGGCGGCACGGTGGGCA+AGG | 0.311016 | 2.4:+64750087 | None:intergenic |
| GTTCTTTGCTTCTTCGAGTT+TGG | 0.325988 | 2.4:+64750028 | None:intergenic |
| TACGATTGATGTTAATTTGA+TGG | 0.335633 | 2.4:-64749832 | MS.gene047943:CDS |
| AAAATCATTGCCGCCTCTTC+TGG | 0.340277 | 2.4:-64747088 | MS.gene047943:CDS |
| GGAGGAGGAGGAGAGGGAGG+AGG | 0.340474 | 2.4:+64750207 | None:intergenic |
| GCGTTATCCCTAGCAACTTC+AGG | 0.363331 | 2.4:-64746977 | MS.gene047943:CDS |
| GCCCACCGTGCCGCCGCCGA+TGG | 0.382051 | 2.4:-64750083 | MS.gene047943:CDS |
| CACTATGTTTCCAGTGGAAC+TGG | 0.390366 | 2.4:-64746883 | MS.gene047943:CDS |
| CTTTGCCTCAAATGAAGAAT+AGG | 0.390871 | 2.4:-64749785 | MS.gene047943:CDS |
| TTTGTTGAGGTTATTACTGC+TGG | 0.392303 | 2.4:-64746923 | MS.gene047943:CDS |
| TGTTTCATCACAAGCTGGTC+AGG | 0.403214 | 2.4:-64749733 | MS.gene047943:intron |
| GGACGAGGAAGTAGAGGAGG+GGG | 0.404238 | 2.4:+64750186 | None:intergenic |
| TGATGGGGCGTGGGCGGACG+AGG | 0.404592 | 2.4:+64750171 | None:intergenic |
| TTGGTGATTGGGATCTTGAT+GGG | 0.408107 | 2.4:+64750155 | None:intergenic |
| GTGCGCCATCGGCGGCGGCA+CGG | 0.432781 | 2.4:+64750078 | None:intergenic |
| GAGAGGGAGGAGGATGAAGA+AGG | 0.435215 | 2.4:+64750217 | None:intergenic |
| GCCATCGGCGGCGGCACGGT+GGG | 0.435707 | 2.4:+64750082 | None:intergenic |
| GCATTGCAACAAGAGGTTAT+AGG | 0.440395 | 2.4:-64747662 | MS.gene047943:CDS |
| ATTGGGATCTTGATGGGGCG+TGG | 0.442865 | 2.4:+64750161 | None:intergenic |
| AAAACGTGGCGGTTGGTGAT+TGG | 0.443767 | 2.4:+64750143 | None:intergenic |
| TCTTTCCTATTCTTCATTTG+AGG | 0.444715 | 2.4:+64749780 | None:intergenic |
| TATCATTTCTTGCAATTTGG+AGG | 0.451120 | 2.4:-64747005 | MS.gene047943:CDS |
| TGCTTCTTCGAGTTTGGTGA+GGG | 0.456614 | 2.4:+64750034 | None:intergenic |
| ATTCAACAACAGCACATCAA+TGG | 0.461206 | 2.4:+64749911 | None:intergenic |
| AAACGTGGCGGTTGGTGATT+GGG | 0.461608 | 2.4:+64750144 | None:intergenic |
| ACGCTACCGGCGTTGAAGTA+GGG | 0.463147 | 2.4:-64749995 | MS.gene047943:CDS |
| TTGGGATCTTGATGGGGCGT+GGG | 0.466459 | 2.4:+64750162 | None:intergenic |
| CGCCATCGGCGGCGGCACGG+TGG | 0.473237 | 2.4:+64750081 | None:intergenic |
| GACACGTGCGCCATCGGCGG+CGG | 0.475509 | 2.4:+64750073 | None:intergenic |
| GGCGGACGAGGAAGTAGAGG+AGG | 0.483744 | 2.4:+64750183 | None:intergenic |
| AACGCTACCGGCGTTGAAGT+AGG | 0.486419 | 2.4:-64749996 | MS.gene047943:CDS |
| TTATTACCTTCCACAAGTCC+AGG | 0.487399 | 2.4:+64747593 | None:intergenic |
| ACGATTGATGTTAATTTGAT+GGG | 0.487967 | 2.4:-64749831 | MS.gene047943:CDS |
| CCTCCAGACACGGATACTCC+TGG | 0.495714 | 2.4:-64747611 | MS.gene047943:CDS |
| GGGATAAACCTGAAGTTGCT+AGG | 0.498430 | 2.4:+64746969 | None:intergenic |
| CACGGATACTCCTGGACTTG+TGG | 0.498701 | 2.4:-64747603 | MS.gene047943:CDS |
| TGTTTCCAGTGGAACTGGTA+TGG | 0.499008 | 2.4:-64746878 | MS.gene047943:CDS |
| TTCAACAACAGCACATCAAT+GGG | 0.501781 | 2.4:+64749912 | None:intergenic |
| AGTCCAGGAGTATCCGTGTC+TGG | 0.502012 | 2.4:+64747608 | None:intergenic |
| AAGAAAGCGGTGGATGAAGC+TGG | 0.502128 | 2.4:-64749936 | MS.gene047943:CDS |
| AACGCCGGTAGCGTTCTTGA+CGG | 0.502453 | 2.4:+64750004 | None:intergenic |
| GGCGGCGGCACGGTGGGCAA+GGG | 0.503409 | 2.4:+64750088 | None:intergenic |
| ATTCTTAATGGCATTTGTTG+AGG | 0.509829 | 2.4:-64746936 | MS.gene047943:CDS |
| GATGTGCTGTTGTTGAATCA+TGG | 0.511632 | 2.4:-64749906 | MS.gene047943:CDS |
| TGCTTCCATACCAGTTCCAC+TGG | 0.512470 | 2.4:+64746873 | None:intergenic |
| GATGGAGACACGTGCGCCAT+CGG | 0.519050 | 2.4:+64750067 | None:intergenic |
| GAAACAAAAGCGATAGAAGC+AGG | 0.524069 | 2.4:+64749750 | None:intergenic |
| ATCATTTCTTGCAATTTGGA+GGG | 0.526476 | 2.4:-64747004 | MS.gene047943:CDS |
| GGATCTTGATGGGGCGTGGG+CGG | 0.528430 | 2.4:+64750165 | None:intergenic |
| CCATTAAGAATGACCTCTGA+GGG | 0.529640 | 2.4:+64746948 | None:intergenic |
| TTGCTTCTTCGAGTTTGGTG+AGG | 0.529732 | 2.4:+64750033 | None:intergenic |
| TAGAGAAGTGGCACAAGCAA+AGG | 0.532078 | 2.4:-64746850 | MS.gene047943:CDS |
| TGGCGCACGTGTCTCCATCA+TGG | 0.543272 | 2.4:-64750063 | MS.gene047943:CDS |
| AGCAGAAGCATTGCAACAAG+AGG | 0.543956 | 2.4:-64747669 | MS.gene047943:CDS |
| AACTCCGTCAAGAACGCTAC+CGG | 0.545959 | 2.4:-64750008 | MS.gene047943:CDS |
| GGTGAGGGATCGCGCCATGA+TGG | 0.552275 | 2.4:+64750049 | None:intergenic |
| GCCAGTAAATTTGGCCTCCG+TGG | 0.553386 | 2.4:-64747695 | MS.gene047943:CDS |
| CGGACGAGGAAGTAGAGGAG+GGG | 0.556324 | 2.4:+64750185 | None:intergenic |
| ACAGGCGGCTCAAGCGGCAT+CGG | 0.556882 | 2.4:-64750116 | MS.gene047943:CDS |
| AGCTTTCTGAGCAACTTCAT+CGG | 0.559805 | 2.4:+64747054 | None:intergenic |
| TTCATCACAGGCGGCTCAAG+CGG | 0.563799 | 2.4:-64750122 | MS.gene047943:CDS |
| TGGTGATTGGGATCTTGATG+GGG | 0.570418 | 2.4:+64750156 | None:intergenic |
| GTGGGCGGACGAGGAAGTAG+AGG | 0.572340 | 2.4:+64750180 | None:intergenic |
| GGAGACACGTGCGCCATCGG+CGG | 0.575948 | 2.4:+64750070 | None:intergenic |
| GGATAAACCTGAAGTTGCTA+GGG | 0.579338 | 2.4:+64746970 | None:intergenic |
| GGCTTTCATAAAACCAGAAG+AGG | 0.580601 | 2.4:+64747075 | None:intergenic |
| CAGGAGTATCCGTGTCTGGA+GGG | 0.595120 | 2.4:+64747612 | None:intergenic |
| GATACTCCTGGACTTGTGGA+AGG | 0.602564 | 2.4:-64747599 | MS.gene047943:intron |
| CGTTGAAGTAGGGATATTCG+CGG | 0.612981 | 2.4:-64749985 | MS.gene047943:CDS |
| CCAGGAGTATCCGTGTCTGG+AGG | 0.613762 | 2.4:+64747611 | None:intergenic |
| TCTGATATTCCCTCCAGACA+CGG | 0.634324 | 2.4:-64747621 | MS.gene047943:CDS |
| GCGGACGAGGAAGTAGAGGA+GGG | 0.642900 | 2.4:+64750184 | None:intergenic |
| TTTCATAAAACCAGAAGAGG+CGG | 0.645943 | 2.4:+64747078 | None:intergenic |
| GGTATGGAAGCATAGAGAAG+TGG | 0.645953 | 2.4:-64746862 | MS.gene047943:CDS |
| GAATATCCCTACTTCAACGC+CGG | 0.651367 | 2.4:+64749989 | None:intergenic |
| TGTGATGAAAACGTGGCGGT+TGG | 0.654642 | 2.4:+64750136 | None:intergenic |
| TAGCAGCACTATGTTTCCAG+TGG | 0.655763 | 2.4:-64746889 | MS.gene047943:CDS |
| GAAGAAGGAGAAGAATGCGT+CGG | 0.665412 | 2.4:+64750232 | None:intergenic |
| GCCATTAAGAATGACCTCTG+AGG | 0.666181 | 2.4:+64746947 | None:intergenic |
| CTTCAGGTTTATCCCCTCAG+AGG | 0.666800 | 2.4:-64746961 | MS.gene047943:CDS |
| GCAATGCTTCTGCTAAACCA+CGG | 0.698466 | 2.4:+64747678 | None:intergenic |
| AGCCGCCTGTGATGAAAACG+TGG | 0.707468 | 2.4:+64750129 | None:intergenic |
| CTATGATGCTGTGAAGAAAG+CGG | 0.713087 | 2.4:-64749949 | MS.gene047943:CDS |
| TGATGCTGTGAAGAAAGCGG+TGG | 0.713900 | 2.4:-64749946 | MS.gene047943:CDS |
| CGCCTGTGATGAAAACGTGG+CGG | 0.736427 | 2.4:+64750132 | None:intergenic |
| TGAAGTAGGGATATTCGCGG+CGG | 0.755325 | 2.4:-64749982 | MS.gene047943:CDS |
| CATTAAGAATGACCTCTGAG+GGG | 0.759100 | 2.4:+64746949 | None:intergenic |
| ATGCTTCTGCTAAACCACGG+AGG | 0.773999 | 2.4:+64747681 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTATTTTTTACTG+TGG | - | chr2.4:64747944-64747963 | MS.gene047943:intron | 10.0% |
| !!! | TTTTATTTATTTTTTTACTG+TGG | - | chr2.4:64748049-64748068 | MS.gene047943:intron | 10.0% |
| !! | AAGTTAATAGATTATTTGTT+AGG | - | chr2.4:64746538-64746557 | MS.gene047943:intron | 15.0% |
| !! | CTAACATATAGTTTATTATT+GGG | - | chr2.4:64746883-64746902 | MS.gene047943:CDS | 15.0% |
| !! | CTGATAAATTATGTTTATTA+TGG | - | chr2.4:64746113-64746132 | MS.gene047943:intron | 15.0% |
| !! | TCTAACATATAGTTTATTAT+TGG | - | chr2.4:64746882-64746901 | MS.gene047943:CDS | 15.0% |
| !!! | AAAAATGGAATCAATTTTTT+TGG | - | chr2.4:64749435-64749454 | MS.gene047943:intron | 15.0% |
| !!! | AAAAATTGATTCCATTTTTT+AGG | + | chr2.4:64749434-64749453 | None:intergenic | 15.0% |
| !!! | ATATTCTTACCTTTATTTTA+TGG | + | chr2.4:64747431-64747450 | None:intergenic | 15.0% |
| !!! | TTAAGTTGATAAAAATAAGA+TGG | - | chr2.4:64749044-64749063 | MS.gene047943:intron | 15.0% |
| !!! | TTTTTTTTTTGGAAAAACAT+AGG | - | chr2.4:64746315-64746334 | MS.gene047943:intron | 15.0% |
| !! | AAAAAAAAACATAACTCCAT+TGG | + | chr2.4:64746298-64746317 | None:intergenic | 20.0% |
| !! | AAAAAAAACATAACTCCATT+GGG | + | chr2.4:64746297-64746316 | None:intergenic | 20.0% |
| !! | AAATCAAAAGAAAAAGAGAA+GGG | + | chr2.4:64747782-64747801 | None:intergenic | 20.0% |
| !! | ACACTAAATATGAAATTTCA+GGG | + | chr2.4:64749229-64749248 | None:intergenic | 20.0% |
| !! | ATGACAAAATCAGAAAATTA+AGG | + | chr2.4:64748578-64748597 | None:intergenic | 20.0% |
| !! | ATTGATACCCTATAAAAATA+AGG | + | chr2.4:64749129-64749148 | None:intergenic | 20.0% |
| !! | CAAATTATAGATAGTTTCTT+TGG | + | chr2.4:64746462-64746481 | None:intergenic | 20.0% |
| !! | TAAAAATGAGTCGTATATAT+AGG | - | chr2.4:64746937-64746956 | MS.gene047943:CDS | 20.0% |
| !! | TACATAAATTTCTTAAGAGA+TGG | + | chr2.4:64748619-64748638 | None:intergenic | 20.0% |
| !! | TAGAAGAAACCATAAAATAA+AGG | - | chr2.4:64747419-64747438 | MS.gene047943:intron | 20.0% |
| !! | TATATAGTATATTGTCATGT+AGG | - | chr2.4:64748536-64748555 | MS.gene047943:intron | 20.0% |
| !! | TTAGAATAGTTTCAAATAGT+GGG | + | chr2.4:64746867-64746886 | None:intergenic | 20.0% |
| !! | TTCAATGTGTACTTAAAATA+GGG | - | chr2.4:64747183-64747202 | MS.gene047943:intron | 20.0% |
| !! | TTGATACCCTATAAAAATAA+GGG | + | chr2.4:64749128-64749147 | None:intergenic | 20.0% |
| !! | TTTCAATGTGTACTTAAAAT+AGG | - | chr2.4:64747182-64747201 | MS.gene047943:intron | 20.0% |
| !!! | AAAATCATCATTTTATCTTC+TGG | - | chr2.4:64747396-64747415 | MS.gene047943:intron | 20.0% |
| !!! | ATGTGACATTTTATAAAAGT+AGG | + | chr2.4:64749159-64749178 | None:intergenic | 20.0% |
| !!! | ATTTTTATAGGGTATCAATT+TGG | - | chr2.4:64749130-64749149 | MS.gene047943:intron | 20.0% |
| !!! | GAAAGTGTTTTCTAATTATA+AGG | - | chr2.4:64749465-64749484 | MS.gene047943:intron | 20.0% |
| !!! | TGTGACATTTTATAAAAGTA+GGG | + | chr2.4:64749158-64749177 | None:intergenic | 20.0% |
| !!! | TTTTATCATTTCTTGCAATT+TGG | - | chr2.4:64748796-64748815 | MS.gene047943:intron | 20.0% |
| !!! | TTTTGTTACAGAATAAACTT+TGG | - | chr2.4:64749528-64749547 | MS.gene047943:intron | 20.0% |
| ! | AAAAAAACATAACTCCATTG+GGG | + | chr2.4:64746296-64746315 | None:intergenic | 25.0% |
| ! | AAAGTTGTTAAAAGTCAGTT+AGG | + | chr2.4:64747591-64747610 | None:intergenic | 25.0% |
| ! | AAGTAATACTAATATGTGTG+AGG | + | chr2.4:64748258-64748277 | None:intergenic | 25.0% |
| ! | ACATATAGTTTATTATTGGG+TGG | - | chr2.4:64746886-64746905 | MS.gene047943:CDS | 25.0% |
| ! | ACTTATATAAGTCATAACCT+TGG | + | chr2.4:64747155-64747174 | None:intergenic | 25.0% |
| ! | ACTTTATACCAATTATTGTG+TGG | - | chr2.4:64746164-64746183 | MS.gene047943:intron | 25.0% |
| ! | AGAATTTCTATTATACAGAG+AGG | + | chr2.4:64747640-64747659 | None:intergenic | 25.0% |
| ! | ATAAAAATAAGGGAGCAAAT+TGG | + | chr2.4:64749118-64749137 | None:intergenic | 25.0% |
| ! | ATCTAATATCACTAATAAGC+TGG | - | chr2.4:64746602-64746621 | MS.gene047943:intron | 25.0% |
| ! | ATTTCATGTATTCAGTATTC+TGG | - | chr2.4:64749782-64749801 | MS.gene047943:CDS | 25.0% |
| ! | CACAGATTAAATAATTTCAG+AGG | + | chr2.4:64748414-64748433 | None:intergenic | 25.0% |
| ! | CTTATATAAGTCATAACCTT+GGG | + | chr2.4:64747154-64747173 | None:intergenic | 25.0% |
| ! | CTTTATACCAATTATTGTGT+GGG | - | chr2.4:64746165-64746184 | MS.gene047943:intron | 25.0% |
| ! | GAAATCAAAAGAAAAAGAGA+AGG | + | chr2.4:64747783-64747802 | None:intergenic | 25.0% |
| ! | GAATTTCTATTATACAGAGA+GGG | + | chr2.4:64747639-64747658 | None:intergenic | 25.0% |
| ! | GACACTAAATATGAAATTTC+AGG | + | chr2.4:64749230-64749249 | None:intergenic | 25.0% |
| ! | GTTAGAATAGTTTCAAATAG+TGG | + | chr2.4:64746868-64746887 | None:intergenic | 25.0% |
| ! | TACTGAATACATGAAATTTG+TGG | + | chr2.4:64749779-64749798 | None:intergenic | 25.0% |
| ! | TAGAGAATTTGATAGAAAGA+TGG | - | chr2.4:64747011-64747030 | MS.gene047943:CDS | 25.0% |
| ! | TCTACTTCACATTCATAAAT+TGG | + | chr2.4:64749831-64749850 | None:intergenic | 25.0% |
| ! | TTATATAAGTCATAACCTTG+GGG | + | chr2.4:64747153-64747172 | None:intergenic | 25.0% |
| ! | TTATTGAATACAGTTCATGT+CGG | + | chr2.4:64746991-64747010 | None:intergenic | 25.0% |
| ! | TTGACTTTACAGTTTAAGAA+TGG | - | chr2.4:64749686-64749705 | MS.gene047943:intron | 25.0% |
| ! | TTTCATATTTAGTGTCTACT+TGG | - | chr2.4:64749234-64749253 | MS.gene047943:intron | 25.0% |
| !! | AATGATGATTTTCATTCACT+TGG | + | chr2.4:64747388-64747407 | None:intergenic | 25.0% |
| !! | ACGATTGATGTTAATTTGAT+GGG | - | chr2.4:64745973-64745992 | MS.gene047943:intron | 25.0% |
| !! | AGATGATATGTTTTGTATGT+TGG | + | chr2.4:64747828-64747847 | None:intergenic | 25.0% |
| !! | ATTTCCAATTATGCGTTTTA+TGG | - | chr2.4:64746216-64746235 | MS.gene047943:intron | 25.0% |
| !! | GTGACATTTTATAAAAGTAG+GGG | + | chr2.4:64749157-64749176 | None:intergenic | 25.0% |
| !! | TACGATTGATGTTAATTTGA+TGG | - | chr2.4:64745972-64745991 | MS.gene047943:intron | 25.0% |
| !! | TTTCCAATTATGCGTTTTAT+GGG | - | chr2.4:64746217-64746236 | MS.gene047943:intron | 25.0% |
| !!! | AAAACTCTAAAATAGGAAGA+AGG | + | chr2.4:64747313-64747332 | None:intergenic | 25.0% |
| !!! | ACACTAAGTATTGAATTTCA+TGG | + | chr2.4:64749261-64749280 | None:intergenic | 25.0% |
| !!! | ACGACTCATTTTTAAAATGA+TGG | + | chr2.4:64746931-64746950 | None:intergenic | 25.0% |
| !!! | AGTTGACTTGTTAAAATGAA+TGG | - | chr2.4:64746640-64746659 | MS.gene047943:intron | 25.0% |
| !!! | ATTTGCTCCCTTATTTTTAT+AGG | - | chr2.4:64749118-64749137 | MS.gene047943:intron | 25.0% |
| !!! | ATTTTTTTACTGTGGAGTTT+AGG | - | chr2.4:64748057-64748076 | MS.gene047943:intron | 25.0% |
| !!! | CATTTTTAAAATGATGGGAT+GGG | + | chr2.4:64746925-64746944 | None:intergenic | 25.0% |
| !!! | CGACTCATTTTTAAAATGAT+GGG | + | chr2.4:64746930-64746949 | None:intergenic | 25.0% |
| !!! | CTATTTTAGAGTTTTGTGAA+GGG | - | chr2.4:64747318-64747337 | MS.gene047943:intron | 25.0% |
| !!! | GATGATTTTTTTCTTCATAC+AGG | - | chr2.4:64750042-64750061 | MS.gene047943:CDS | 25.0% |
| !!! | TATTTTAGAGTTTTGTGAAG+GGG | - | chr2.4:64747319-64747338 | MS.gene047943:intron | 25.0% |
| !!! | TCATTTTTAAAATGATGGGA+TGG | + | chr2.4:64746926-64746945 | None:intergenic | 25.0% |
| !!! | TTACTTTTCGTAATAGATCT+AGG | - | chr2.4:64748272-64748291 | MS.gene047943:intron | 25.0% |
| !!! | TTTGCTCCCTTATTTTTATA+GGG | - | chr2.4:64749119-64749138 | MS.gene047943:intron | 25.0% |
| AAAGTTGTGTCCTAAATCAA+AGG | + | chr2.4:64749618-64749637 | None:intergenic | 30.0% | |
| AAGTAAATTTGACACCCATT+TGG | - | chr2.4:64746567-64746586 | MS.gene047943:intron | 30.0% | |
| AAGTGTAAGTACAAACTGAA+AGG | - | chr2.4:64748655-64748674 | MS.gene047943:intron | 30.0% | |
| AAGTTGTGTCCTAAATCAAA+GGG | + | chr2.4:64749617-64749636 | None:intergenic | 30.0% | |
| AATCAATCCCACACAATAAT+TGG | + | chr2.4:64746175-64746194 | None:intergenic | 30.0% | |
| ACTATCATAAGATGTTAAGC+TGG | + | chr2.4:64749356-64749375 | None:intergenic | 30.0% | |
| ACTTGTGGAAGGTAATAAAT+TGG | - | chr2.4:64748216-64748235 | MS.gene047943:intron | 30.0% | |
| AGAAATTCTCCTAGATTTCA+GGG | - | chr2.4:64747651-64747670 | MS.gene047943:CDS | 30.0% | |
| AGCTTAACATCTTATGATAG+TGG | - | chr2.4:64749355-64749374 | MS.gene047943:intron | 30.0% | |
| ATATAGGAATGAAATCCACT+TGG | - | chr2.4:64746953-64746972 | MS.gene047943:CDS | 30.0% | |
| ATATTGATCATGCAATGTAG+GGG | + | chr2.4:64746672-64746691 | None:intergenic | 30.0% | |
| ATCATTTCTTGCAATTTGGA+GGG | - | chr2.4:64748800-64748819 | MS.gene047943:intron | 30.0% | |
| ATGAACAAATACAGGACAAA+TGG | - | chr2.4:64749297-64749316 | MS.gene047943:intron | 30.0% | |
| ATGAATTAGTGCATTGTAGA+AGG | - | chr2.4:64749973-64749992 | MS.gene047943:CDS | 30.0% | |
| ATGTTTATTATGGCCATGTT+TGG | - | chr2.4:64746123-64746142 | MS.gene047943:intron | 30.0% | |
| CATATTGATCATGCAATGTA+GGG | + | chr2.4:64746673-64746692 | None:intergenic | 30.0% | |
| CTATTAACTTCTTCCAAACA+TGG | + | chr2.4:64746528-64746547 | None:intergenic | 30.0% | |
| CTTTCGTAAAATGATGATTG+TGG | - | chr2.4:64749890-64749909 | MS.gene047943:CDS | 30.0% | |
| GCTTAACATCTTATGATAGT+GGG | - | chr2.4:64749356-64749375 | MS.gene047943:intron | 30.0% | |
| GGGAATTTACTCCTAAAAAA+TGG | - | chr2.4:64749420-64749439 | MS.gene047943:intron | 30.0% | |
| TAGAAATTCTCCTAGATTTC+AGG | - | chr2.4:64747650-64747669 | MS.gene047943:CDS | 30.0% | |
| TAGCATATCAATTCAACATG+TGG | - | chr2.4:64747896-64747915 | MS.gene047943:intron | 30.0% | |
| TATATAAGTCATAACCTTGG+GGG | + | chr2.4:64747152-64747171 | None:intergenic | 30.0% | |
| TATCATTTCTTGCAATTTGG+AGG | - | chr2.4:64748799-64748818 | MS.gene047943:intron | 30.0% | |
| TCATATTGATCATGCAATGT+AGG | + | chr2.4:64746674-64746693 | None:intergenic | 30.0% | |
| TCTAATTATAAGGATCCACA+TGG | - | chr2.4:64749475-64749494 | MS.gene047943:intron | 30.0% | |
| TCTCTGTAATTAACCATGTT+TGG | - | chr2.4:64746512-64746531 | MS.gene047943:intron | 30.0% | |
| TCTTTCCTATTCTTCATTTG+AGG | + | chr2.4:64746027-64746046 | None:intergenic | 30.0% | |
| TGCATTGTAGAAGGTTAATT+GGG | - | chr2.4:64749982-64750001 | MS.gene047943:CDS | 30.0% | |
| TGTAGAAAGTGAGAGAATAA+AGG | + | chr2.4:64747690-64747709 | None:intergenic | 30.0% | |
| TTAAGCTGTTTATCCAAACA+TGG | + | chr2.4:64746139-64746158 | None:intergenic | 30.0% | |
| TTACAAAGTCGTTCATAAGA+GGG | + | chr2.4:64749663-64749682 | None:intergenic | 30.0% | |
| TTACACATCATTGAAAAGTG+AGG | - | chr2.4:64749388-64749407 | MS.gene047943:intron | 30.0% | |
| TTGGTTTAGTAGGAAAACAA+CGG | + | chr2.4:64747128-64747147 | None:intergenic | 30.0% | |
| TTTACAAAGTCGTTCATAAG+AGG | + | chr2.4:64749664-64749683 | None:intergenic | 30.0% | |
| TTTCAAATATCCACTTCCTT+GGG | - | chr2.4:64747051-64747070 | MS.gene047943:CDS | 30.0% | |
| TTTCTAACAAACATCTAGAG+TGG | + | chr2.4:64746272-64746291 | None:intergenic | 30.0% | |
| ! | AGACTGTCTAGAATGATTAT+TGG | - | chr2.4:64749848-64749867 | MS.gene047943:CDS | 30.0% |
| ! | AGGACACAACTTTTATATCA+AGG | - | chr2.4:64749625-64749644 | MS.gene047943:intron | 30.0% |
| ! | AGTTTAGTTCAACCTCAATA+TGG | - | chr2.4:64748344-64748363 | MS.gene047943:intron | 30.0% |
| ! | ATTCTTAATGGCATTTGTTG+AGG | - | chr2.4:64748868-64748887 | MS.gene047943:intron | 30.0% |
| ! | GGTTTCTGATTTTCATTTTC+AGG | - | chr2.4:64750226-64750245 | MS.gene047943:CDS | 30.0% |
| ! | GTTCATTTTACATCGAAATG+AGG | - | chr2.4:64748294-64748313 | MS.gene047943:intron | 30.0% |
| ! | TATAGGGAAGGTATAGAAAA+TGG | + | chr2.4:64746366-64746385 | None:intergenic | 30.0% |
| ! | TTCCAATTATGCGTTTTATG+GGG | - | chr2.4:64746218-64746237 | MS.gene047943:intron | 30.0% |
| ! | TTTTGTATGTTGGAAAGCAA+AGG | + | chr2.4:64747818-64747837 | None:intergenic | 30.0% |
| !! | CATATTATGAGAGTGTCTTT+GGG | - | chr2.4:64748510-64748529 | MS.gene047943:intron | 30.0% |
| !! | CATTTGGTTCTTAAACTTTG+TGG | - | chr2.4:64750205-64750224 | MS.gene047943:CDS | 30.0% |
| !! | CCTTCACAAAACTCTAAAAT+AGG | + | chr2.4:64747320-64747339 | None:intergenic | 30.0% |
| !!! | AATGGTGTTACCTTTTATGT+TGG | - | chr2.4:64747090-64747109 | MS.gene047943:CDS | 30.0% |
| !!! | ATTTTAGAGTTTTGTGAAGG+GGG | - | chr2.4:64747320-64747339 | MS.gene047943:intron | 30.0% |
| !!! | CCTATTTTAGAGTTTTGTGA+AGG | - | chr2.4:64747317-64747336 | MS.gene047943:intron | 30.0% |
| !!! | CTGATTTTCATTTTCAGGTA+CGG | - | chr2.4:64750231-64750250 | MS.gene047943:CDS | 30.0% |
| !!! | TGATTTTCATTTTCAGGTAC+GGG | - | chr2.4:64750232-64750251 | MS.gene047943:CDS | 30.0% |
| AACCCCATAAAACGCATAAT+TGG | + | chr2.4:64746223-64746242 | None:intergenic | 35.0% | |
| AATTCAAGCACTTCAATAGC+AGG | + | chr2.4:64748384-64748403 | None:intergenic | 35.0% | |
| ATAGTGTGCAGAAACCAAAT+GGG | + | chr2.4:64746584-64746603 | None:intergenic | 35.0% | |
| ATGAGAACTGCATACACATT+TGG | - | chr2.4:64750189-64750208 | MS.gene047943:CDS | 35.0% | |
| ATTCAACAACAGCACATCAA+TGG | + | chr2.4:64745896-64745915 | None:intergenic | 35.0% | |
| CCAAAGACACTCTCATAATA+TGG | + | chr2.4:64748512-64748531 | None:intergenic | 35.0% | |
| CTTTGCCTCAAATGAAGAAT+AGG | - | chr2.4:64746019-64746038 | MS.gene047943:intron | 35.0% | |
| GAAAAGTGAGGAACTAAGTT+GGG | - | chr2.4:64749400-64749419 | MS.gene047943:intron | 35.0% | |
| GATGTTAGTCCTTGACAATT+TGG | - | chr2.4:64749581-64749600 | MS.gene047943:intron | 35.0% | |
| GCTTATTCAGCCAGTAAATT+TGG | - | chr2.4:64748100-64748119 | MS.gene047943:intron | 35.0% | |
| GGAAAGATGGGAAAAAACAA+TGG | - | chr2.4:64747496-64747515 | MS.gene047943:intron | 35.0% | |
| GGCAATTGCAACTATTGAAA+TGG | - | chr2.4:64746779-64746798 | MS.gene047943:intron | 35.0% | |
| GGCAGCTAAATGAAGTTAAT+TGG | - | chr2.4:64746394-64746413 | MS.gene047943:intron | 35.0% | |
| GGGTAAAATATTGCTTCGAA+TGG | - | chr2.4:64747072-64747091 | MS.gene047943:CDS | 35.0% | |
| GGTATTACTTTCTTCATGCT+GGG | - | chr2.4:64750003-64750022 | MS.gene047943:CDS | 35.0% | |
| GTGAGAGAATAAAGGTTGTT+AGG | + | chr2.4:64747682-64747701 | None:intergenic | 35.0% | |
| GTGCATTGTAGAAGGTTAAT+TGG | - | chr2.4:64749981-64750000 | MS.gene047943:CDS | 35.0% | |
| GTTTCAAATATCCACTTCCT+TGG | - | chr2.4:64747050-64747069 | MS.gene047943:CDS | 35.0% | |
| TACCTTCCCTATATATCGAT+TGG | - | chr2.4:64746373-64746392 | MS.gene047943:intron | 35.0% | |
| TAGCTGCCAATCGATATATA+GGG | + | chr2.4:64746382-64746401 | None:intergenic | 35.0% | |
| TAGGATATTCCCTGAAATCT+AGG | + | chr2.4:64747663-64747682 | None:intergenic | 35.0% | |
| TCAAAAGAAAAAGAGAAGGG+AGG | + | chr2.4:64747779-64747798 | None:intergenic | 35.0% | |
| TCAATATGGATGTGGAATCA+GGG | - | chr2.4:64748358-64748377 | MS.gene047943:intron | 35.0% | |
| TCAATGATTTCATATTGCCC+TGG | - | chr2.4:64746752-64746771 | MS.gene047943:intron | 35.0% | |
| TGAAAAGTGAGGAACTAAGT+TGG | - | chr2.4:64749399-64749418 | MS.gene047943:intron | 35.0% | |
| TGAGCTTAAAGCTCTTACAA+TGG | - | chr2.4:64747472-64747491 | MS.gene047943:intron | 35.0% | |
| TGGAAACTGTCAAACAAAAG+TGG | - | chr2.4:64749495-64749514 | MS.gene047943:intron | 35.0% | |
| TGTACTTAAAATAGGGCTCT+AGG | - | chr2.4:64747190-64747209 | MS.gene047943:intron | 35.0% | |
| TTACATCGAAATGAGGTAAG+TGG | - | chr2.4:64748301-64748320 | MS.gene047943:intron | 35.0% | |
| TTAGCTGCCAATCGATATAT+AGG | + | chr2.4:64746383-64746402 | None:intergenic | 35.0% | |
| TTCAAATATCCACTTCCTTG+GGG | - | chr2.4:64747052-64747071 | MS.gene047943:CDS | 35.0% | |
| TTCAACAACAGCACATCAAT+GGG | + | chr2.4:64745895-64745914 | None:intergenic | 35.0% | |
| TTCTATTATACAGAGAGGGA+AGG | + | chr2.4:64747635-64747654 | None:intergenic | 35.0% | |
| TTGGAGAAATTGATCTCCAA+GGG | - | chr2.4:64747246-64747265 | MS.gene047943:intron | 35.0% | |
| TTTCATAAAACCAGAAGAGG+CGG | + | chr2.4:64748729-64748748 | None:intergenic | 35.0% | |
| TTTGGAAAAACATAGGAGTG+TGG | - | chr2.4:64746322-64746341 | MS.gene047943:intron | 35.0% | |
| TTTGGAGAAATTGATCTCCA+AGG | - | chr2.4:64747245-64747264 | MS.gene047943:intron | 35.0% | |
| TTTGTTGAGGTTATTACTGC+TGG | - | chr2.4:64748881-64748900 | MS.gene047943:intron | 35.0% | |
| TTTGTTTGACAGTTTCCATG+TGG | + | chr2.4:64749493-64749512 | None:intergenic | 35.0% | |
| ! | AATATTTTACCCCAAGGAAG+TGG | + | chr2.4:64747064-64747083 | None:intergenic | 35.0% |
| ! | ATGGAAGGCTAGTTATAGAT+AGG | - | chr2.4:64749081-64749100 | MS.gene047943:intron | 35.0% |
| ! | CATCTGAATGATTAGCCAAT+AGG | - | chr2.4:64747843-64747862 | MS.gene047943:intron | 35.0% |
| ! | GATATTTGAAACAACAACGC+TGG | + | chr2.4:64747042-64747061 | None:intergenic | 35.0% |
| ! | GATTTTCATTCACTTGGATG+AGG | + | chr2.4:64747382-64747401 | None:intergenic | 35.0% |
| ! | TCTTACAATGGTGGAAAGAT+GGG | - | chr2.4:64747484-64747503 | MS.gene047943:intron | 35.0% |
| ! | TGGAAGGCTAGTTATAGATA+GGG | - | chr2.4:64749082-64749101 | MS.gene047943:intron | 35.0% |
| ! | TGTGTTTTATGCGTTGGAAT+TGG | - | chr2.4:64745921-64745940 | MS.gene047943:intron | 35.0% |
| ! | TGTTTGTTAGAAATCCCCAA+TGG | - | chr2.4:64746279-64746298 | MS.gene047943:intron | 35.0% |
| ! | TTGATGGTCACCAACATAAA+AGG | + | chr2.4:64747103-64747122 | None:intergenic | 35.0% |
| ! | TTTTACTGTGGAGTTTAGGT+GGG | - | chr2.4:64748061-64748080 | MS.gene047943:intron | 35.0% |
| ! | TTTTTACTGTGGAGTTTAGG+TGG | - | chr2.4:64748060-64748079 | MS.gene047943:intron | 35.0% |
| !! | AAGGATGTTTTAAACCCTTG+GGG | - | chr2.4:64747218-64747237 | MS.gene047943:intron | 35.0% |
| !! | CAAGGATGTTTTAAACCCTT+GGG | - | chr2.4:64747217-64747236 | MS.gene047943:intron | 35.0% |
| !! | CCATATTATGAGAGTGTCTT+TGG | - | chr2.4:64748509-64748528 | MS.gene047943:intron | 35.0% |
| !! | TTATCGAAGTGTTGTAAGAG+CGG | - | chr2.4:64747871-64747890 | MS.gene047943:intron | 35.0% |
| AATTTCATCGTAGAGCAGAG+TGG | + | chr2.4:64750138-64750157 | None:intergenic | 40.0% | |
| ACTTCGATAACACTGCCTAT+TGG | + | chr2.4:64747861-64747880 | None:intergenic | 40.0% | |
| AGCTTTCTGAGCAACTTCAT+CGG | + | chr2.4:64748753-64748772 | None:intergenic | 40.0% | |
| ATGATTTCATATTGCCCTGG+CGG | - | chr2.4:64746755-64746774 | MS.gene047943:intron | 40.0% | |
| CAAGAGATGATCTAGTGATG+TGG | - | chr2.4:64748024-64748043 | MS.gene047943:intron | 40.0% | |
| CACACTCTACAACAACTCAA+CGG | - | chr2.4:64746818-64746837 | MS.gene047943:intron | 40.0% | |
| CATTAAGAATGACCTCTGAG+GGG | + | chr2.4:64748858-64748877 | None:intergenic | 40.0% | |
| CCATTAAGAATGACCTCTGA+GGG | + | chr2.4:64748859-64748878 | None:intergenic | 40.0% | |
| CTATGATGCTGTGAAGAAAG+CGG | - | chr2.4:64745855-64745874 | MS.gene047943:intron | 40.0% | |
| CTCAATATGGATGTGGAATC+AGG | - | chr2.4:64748357-64748376 | MS.gene047943:intron | 40.0% | |
| CTGATTCCACATCCATATTG+AGG | + | chr2.4:64748359-64748378 | None:intergenic | 40.0% | |
| GAAACAAAAGCGATAGAAGC+AGG | + | chr2.4:64746057-64746076 | None:intergenic | 40.0% | |
| GATAGTGTGCAGAAACCAAA+TGG | + | chr2.4:64746585-64746604 | None:intergenic | 40.0% | |
| GCATTGCAACAAGAGGTTAT+AGG | - | chr2.4:64748142-64748161 | MS.gene047943:intron | 40.0% | |
| GCTTAAAGCTCTTACAATGG+TGG | - | chr2.4:64747475-64747494 | MS.gene047943:intron | 40.0% | |
| GGAATGAAATCCACTTGGTT+TGG | - | chr2.4:64746958-64746977 | MS.gene047943:CDS | 40.0% | |
| GGAGTTTAGGTGGGAATTTA+TGG | - | chr2.4:64748070-64748089 | MS.gene047943:intron | 40.0% | |
| GGATAAACCTGAAGTTGCTA+GGG | + | chr2.4:64748837-64748856 | None:intergenic | 40.0% | |
| GGCTTTCATAAAACCAGAAG+AGG | + | chr2.4:64748732-64748751 | None:intergenic | 40.0% | |
| GGGTATTACTTTCTTCATGC+TGG | - | chr2.4:64750002-64750021 | MS.gene047943:CDS | 40.0% | |
| GTTCAACCTCAATATGGATG+TGG | - | chr2.4:64748350-64748369 | MS.gene047943:intron | 40.0% | |
| TATGAACTCCTACAAGAGCT+AGG | - | chr2.4:64747541-64747560 | MS.gene047943:intron | 40.0% | |
| TCAGTCAACTTAGTTGTCAC+TGG | - | chr2.4:64749178-64749197 | MS.gene047943:intron | 40.0% | |
| TCCAAGCGATGAACAAATAC+AGG | - | chr2.4:64749289-64749308 | MS.gene047943:intron | 40.0% | |
| TCCTGTATTTGTTCATCGCT+TGG | + | chr2.4:64749293-64749312 | None:intergenic | 40.0% | |
| TGAGTTGTTGTAGAGTGTGA+TGG | + | chr2.4:64746817-64746836 | None:intergenic | 40.0% | |
| TGCCAATCGATATATAGGGA+AGG | + | chr2.4:64746378-64746397 | None:intergenic | 40.0% | |
| TGCGTTGGAATTGGAGAAAA+TGG | - | chr2.4:64745930-64745949 | MS.gene047943:intron | 40.0% | |
| TGGAGAAATTGATCTCCAAG+GGG | - | chr2.4:64747247-64747266 | MS.gene047943:intron | 40.0% | |
| TGTATGTTGGAAAGCAAAGG+AGG | + | chr2.4:64747815-64747834 | None:intergenic | 40.0% | |
| TTATTACCTTCCACAAGTCC+AGG | + | chr2.4:64748214-64748233 | None:intergenic | 40.0% | |
| ! | CACTTGGATGAGGATTTTAG+AGG | + | chr2.4:64747372-64747391 | None:intergenic | 40.0% |
| ! | CGAAGCAATATTTTACCCCA+AGG | + | chr2.4:64747070-64747089 | None:intergenic | 40.0% |
| ! | CTCTTACAATGGTGGAAAGA+TGG | - | chr2.4:64747483-64747502 | MS.gene047943:intron | 40.0% |
| ! | GATGTGCTGTTGTTGAATCA+TGG | - | chr2.4:64745898-64745917 | MS.gene047943:intron | 40.0% |
| ! | GTTCTTTGCTTCTTCGAGTT+TGG | + | chr2.4:64745779-64745798 | None:intergenic | 40.0% |
| ! | GTTGCTCAGAAAGCTTTTGA+TGG | - | chr2.4:64748758-64748777 | MS.gene047943:intron | 40.0% |
| ! | TAGGAAAACAACGGTGTTGA+TGG | + | chr2.4:64747119-64747138 | None:intergenic | 40.0% |
| ! | TCATGGTGTGTTTTATGCGT+TGG | - | chr2.4:64745915-64745934 | MS.gene047943:intron | 40.0% |
| ! | TTGGTGATTGGGATCTTGAT+GGG | + | chr2.4:64745652-64745671 | None:intergenic | 40.0% |
| !! | AGAAAGCACTGATGCGAATT+GGG | - | chr2.4:64747717-64747736 | MS.gene047943:CDS | 40.0% |
| !! | AGATGGCACAAAAGAGTACT+TGG | + | chr2.4:64748602-64748621 | None:intergenic | 40.0% |
| !! | CCTTGACAATTTGGTTTGCA+CGG | - | chr2.4:64749590-64749609 | MS.gene047943:intron | 40.0% |
| !! | GCAAGGATGTTTTAAACCCT+TGG | - | chr2.4:64747216-64747235 | MS.gene047943:intron | 40.0% |
| !! | GCTTTTGTTTCATCACAAGC+TGG | - | chr2.4:64746066-64746085 | MS.gene047943:intron | 40.0% |
| !! | TACAGGACAAATGGACTAGT+TGG | - | chr2.4:64749306-64749325 | MS.gene047943:intron | 40.0% |
| !! | TAGAAAGCACTGATGCGAAT+TGG | - | chr2.4:64747716-64747735 | MS.gene047943:CDS | 40.0% |
| !! | TATCGAAGTGTTGTAAGAGC+GGG | - | chr2.4:64747872-64747891 | MS.gene047943:intron | 40.0% |
| AAAATCATTGCCGCCTCTTC+TGG | - | chr2.4:64748716-64748735 | MS.gene047943:intron | 45.0% | |
| AAGCTGGTCAGGTATGGAAT+TGG | - | chr2.4:64746082-64746101 | MS.gene047943:intron | 45.0% | |
| AAGTCATAACCTTGGGGGTT+TGG | + | chr2.4:64747147-64747166 | None:intergenic | 45.0% | |
| ACTAGCGAGTTGTTTAGCCA+AGG | + | chr2.4:64748327-64748346 | None:intergenic | 45.0% | |
| AGAGTGCATCAAGTGCTTTG+AGG | + | chr2.4:64750072-64750091 | None:intergenic | 45.0% | |
| ATTTCTCCAAAACGACCCCA+AGG | + | chr2.4:64747236-64747255 | None:intergenic | 45.0% | |
| CACTATGTTTCCAGTGGAAC+TGG | - | chr2.4:64748921-64748940 | MS.gene047943:intron | 45.0% | |
| CCCTCAGAGGTCATTCTTAA+TGG | - | chr2.4:64748856-64748875 | MS.gene047943:intron | 45.0% | |
| CCGTGCAAACCAAATTGTCA+AGG | + | chr2.4:64749593-64749612 | None:intergenic | 45.0% | |
| CGTTGAAGTAGGGATATTCG+CGG | - | chr2.4:64745819-64745838 | MS.gene047943:intron | 45.0% | |
| GAAGAAGGAGAAGAATGCGT+CGG | + | chr2.4:64745575-64745594 | None:intergenic | 45.0% | |
| GAAGACTGAGAGAAGATGGA+AGG | - | chr2.4:64749066-64749085 | MS.gene047943:intron | 45.0% | |
| GAATATCCCTACTTCAACGC+CGG | + | chr2.4:64745818-64745837 | None:intergenic | 45.0% | |
| GATGGAAGACTGAGAGAAGA+TGG | - | chr2.4:64749062-64749081 | MS.gene047943:intron | 45.0% | |
| GCAATGCTTCTGCTAAACCA+CGG | + | chr2.4:64748129-64748148 | None:intergenic | 45.0% | |
| GCCATTAAGAATGACCTCTG+AGG | + | chr2.4:64748860-64748879 | None:intergenic | 45.0% | |
| GGGATAAACCTGAAGTTGCT+AGG | + | chr2.4:64748838-64748857 | None:intergenic | 45.0% | |
| TAGAGAAGTGGCACAAGCAA+AGG | - | chr2.4:64748954-64748973 | MS.gene047943:intron | 45.0% | |
| TAGCAGCACTATGTTTCCAG+TGG | - | chr2.4:64748915-64748934 | MS.gene047943:intron | 45.0% | |
| TCGCATCAGTGCTTTCTAGA+AGG | + | chr2.4:64747714-64747733 | None:intergenic | 45.0% | |
| TCTGATATTCCCTCCAGACA+CGG | - | chr2.4:64748183-64748202 | MS.gene047943:intron | 45.0% | |
| TGGAAAGCAAAGGAGGTGAA+GGG | + | chr2.4:64747808-64747827 | None:intergenic | 45.0% | |
| TGGTGATTGGGATCTTGATG+GGG | + | chr2.4:64745651-64745670 | None:intergenic | 45.0% | |
| TGTTTCATCACAAGCTGGTC+AGG | - | chr2.4:64746071-64746090 | MS.gene047943:intron | 45.0% | |
| TGTTTCCAGTGGAACTGGTA+TGG | - | chr2.4:64748926-64748945 | MS.gene047943:intron | 45.0% | |
| TTGGAAAGCAAAGGAGGTGA+AGG | + | chr2.4:64747809-64747828 | None:intergenic | 45.0% | |
| TTTCTCCAAAACGACCCCAA+GGG | + | chr2.4:64747235-64747254 | None:intergenic | 45.0% | |
| ! | AGAAGAGGCGGCAATGATTT+TGG | + | chr2.4:64748717-64748736 | None:intergenic | 45.0% |
| ! | CAAAGCACTTGATGCACTCT+GGG | - | chr2.4:64750072-64750091 | MS.gene047943:CDS | 45.0% |
| ! | GGTATGGAAGCATAGAGAAG+TGG | - | chr2.4:64748942-64748961 | MS.gene047943:intron | 45.0% |
| ! | TCAAAGCACTTGATGCACTC+TGG | - | chr2.4:64750071-64750090 | MS.gene047943:CDS | 45.0% |
| ! | TGCTTCTTCGAGTTTGGTGA+GGG | + | chr2.4:64745773-64745792 | None:intergenic | 45.0% |
| ! | TTAAACCCTTGGGGTCGTTT+TGG | - | chr2.4:64747227-64747246 | MS.gene047943:intron | 45.0% |
| ! | TTGCACGGTCCCTTTGATTT+AGG | - | chr2.4:64749605-64749624 | MS.gene047943:intron | 45.0% |
| ! | TTGCTTCTTCGAGTTTGGTG+AGG | + | chr2.4:64745774-64745793 | None:intergenic | 45.0% |
| ! | TTTAGGAGCCTAGCTCTTGT+AGG | + | chr2.4:64747552-64747571 | None:intergenic | 45.0% |
| !! | AATAGGGCTCTAGGTAAGCA+AGG | - | chr2.4:64747199-64747218 | MS.gene047943:intron | 45.0% |
| !! | AGCAGAAGCATTGCAACAAG+AGG | - | chr2.4:64748135-64748154 | MS.gene047943:intron | 45.0% |
| !! | AGTTAGGAGAGTGTTCTCTC+TGG | + | chr2.4:64747575-64747594 | None:intergenic | 45.0% |
| !! | GAGAGTGTTCTCTCTGGTTT+AGG | + | chr2.4:64747569-64747588 | None:intergenic | 45.0% |
| !! | GCAATGATTTTGGTGAGCTC+TGG | + | chr2.4:64748707-64748726 | None:intergenic | 45.0% |
| !! | GCTTTTGATGGCATAAGACG+TGG | - | chr2.4:64748770-64748789 | MS.gene047943:intron | 45.0% |
| !! | GTTGGTGATTGGGATCTTGA+TGG | + | chr2.4:64745653-64745672 | None:intergenic | 45.0% |
| !!! | TTATGTTTTTTTTTTTTTTT+TGG | - | chr2.4:64746304-64746323 | MS.gene047943:intron | 5.0% |
| AACTCCGTCAAGAACGCTAC+CGG | - | chr2.4:64745796-64745815 | MS.gene047943:intron | 50.0% | |
| AAGAAAGCGGTGGATGAAGC+TGG | - | chr2.4:64745868-64745887 | MS.gene047943:intron | 50.0% | |
| ACCACGGAGGCCAAATTTAC+TGG | + | chr2.4:64748113-64748132 | None:intergenic | 50.0% | |
| AGGGAGGATGATAGAGAACC+AGG | + | chr2.4:64747763-64747782 | None:intergenic | 50.0% | |
| ATGATAGAGAACCAGGGACC+AGG | + | chr2.4:64747756-64747775 | None:intergenic | 50.0% | |
| ATGCTTCTGCTAAACCACGG+AGG | + | chr2.4:64748126-64748145 | None:intergenic | 50.0% | |
| ATTTCATATTGCCCTGGCGG+TGG | - | chr2.4:64746758-64746777 | MS.gene047943:intron | 50.0% | |
| CAACAACTCAACGGCAGTTG+TGG | - | chr2.4:64746827-64746846 | MS.gene047943:intron | 50.0% | |
| CATCACAAGCTGGTCAGGTA+TGG | - | chr2.4:64746076-64746095 | MS.gene047943:intron | 50.0% | |
| CCATGTGTGCATGGAGGATA+AGG | - | chr2.4:64747270-64747289 | MS.gene047943:intron | 50.0% | |
| CCTACTAAACCAAACCCCCA+AGG | - | chr2.4:64747135-64747154 | MS.gene047943:intron | 50.0% | |
| CCTTATCCTCCATGCACACA+TGG | + | chr2.4:64747273-64747292 | None:intergenic | 50.0% | |
| CGAAATGAGGTAAGTGGCCT+TGG | - | chr2.4:64748307-64748326 | MS.gene047943:intron | 50.0% | |
| GATACTCCTGGACTTGTGGA+AGG | - | chr2.4:64748205-64748224 | MS.gene047943:intron | 50.0% | |
| GCGTTATCCCTAGCAACTTC+AGG | - | chr2.4:64748827-64748846 | MS.gene047943:intron | 50.0% | |
| GGGAGGATGATAGAGAACCA+GGG | + | chr2.4:64747762-64747781 | None:intergenic | 50.0% | |
| GTGAAGGGGGAAGCAAATCA+GGG | - | chr2.4:64747333-64747352 | MS.gene047943:intron | 50.0% | |
| TCAACGGCAGTTGTGGTATG+TGG | - | chr2.4:64746834-64746853 | MS.gene047943:intron | 50.0% | |
| TGAAGTAGGGATATTCGCGG+CGG | - | chr2.4:64745822-64745841 | MS.gene047943:intron | 50.0% | |
| TGATGCTGTGAAGAAAGCGG+TGG | - | chr2.4:64745858-64745877 | MS.gene047943:intron | 50.0% | |
| TGCTTCCATACCAGTTCCAC+TGG | + | chr2.4:64748934-64748953 | None:intergenic | 50.0% | |
| TGTGAAGGGGGAAGCAAATC+AGG | - | chr2.4:64747332-64747351 | MS.gene047943:intron | 50.0% | |
| TGTGATGAAAACGTGGCGGT+TGG | + | chr2.4:64745671-64745690 | None:intergenic | 50.0% | |
| ! | AACCGCCACGTTTTCATCAC+AGG | - | chr2.4:64745670-64745689 | MS.gene047943:intron | 50.0% |
| ! | CCTTGGGGGTTTGGTTTAGT+AGG | + | chr2.4:64747138-64747157 | None:intergenic | 50.0% |
| ! | CTTCAGGTTTATCCCCTCAG+AGG | - | chr2.4:64748843-64748862 | MS.gene047943:intron | 50.0% |
| !! | AAAACGTGGCGGTTGGTGAT+TGG | + | chr2.4:64745664-64745683 | None:intergenic | 50.0% |
| !! | AAACGTGGCGGTTGGTGATT+GGG | + | chr2.4:64745663-64745682 | None:intergenic | 50.0% |
| AACGCCGGTAGCGTTCTTGA+CGG | + | chr2.4:64745803-64745822 | None:intergenic | 55.0% | |
| AGCCGCCTGTGATGAAAACG+TGG | + | chr2.4:64745678-64745697 | None:intergenic | 55.0% | |
| AGTTGCAATTGCCACCGCCA+GGG | + | chr2.4:64746772-64746791 | None:intergenic | 55.0% | |
| ATTGGGATCTTGATGGGGCG+TGG | + | chr2.4:64745646-64745665 | None:intergenic | 55.0% | |
| CACGGATACTCCTGGACTTG+TGG | - | chr2.4:64748201-64748220 | MS.gene047943:intron | 55.0% | |
| CGCCTGTGATGAAAACGTGG+CGG | + | chr2.4:64745675-64745694 | None:intergenic | 55.0% | |
| CGGTCTGTCACCAAACCAAG+TGG | + | chr2.4:64746971-64746990 | None:intergenic | 55.0% | |
| CTGATGCGAATTGGGCCCAA+AGG | - | chr2.4:64747725-64747744 | MS.gene047943:CDS | 55.0% | |
| GAGAGGGAGGAGGATGAAGA+AGG | + | chr2.4:64745590-64745609 | None:intergenic | 55.0% | |
| GCCAGTAAATTTGGCCTCCG+TGG | - | chr2.4:64748109-64748128 | MS.gene047943:intron | 55.0% | |
| GCGAATTGGGCCCAAAGGTT+GGG | - | chr2.4:64747730-64747749 | MS.gene047943:intron | 55.0% | |
| TAGTTGCAATTGCCACCGCC+AGG | + | chr2.4:64746773-64746792 | None:intergenic | 55.0% | |
| TGCGAATTGGGCCCAAAGGT+TGG | - | chr2.4:64747729-64747748 | MS.gene047943:intron | 55.0% | |
| TTCATCACAGGCGGCTCAAG+CGG | - | chr2.4:64745682-64745701 | MS.gene047943:intron | 55.0% | |
| TTGGGATCTTGATGGGGCGT+GGG | + | chr2.4:64745645-64745664 | None:intergenic | 55.0% | |
| ! | AACGCTACCGGCGTTGAAGT+AGG | - | chr2.4:64745808-64745827 | MS.gene047943:intron | 55.0% |
| ! | ACGCTACCGGCGTTGAAGTA+GGG | - | chr2.4:64745809-64745828 | MS.gene047943:intron | 55.0% |
| ! | CGCCACGTTTTCATCACAGG+CGG | - | chr2.4:64745673-64745692 | MS.gene047943:intron | 55.0% |
| !! | AGTCCAGGAGTATCCGTGTC+TGG | + | chr2.4:64748199-64748218 | None:intergenic | 55.0% |
| !! | CAGGAGTATCCGTGTCTGGA+GGG | + | chr2.4:64748195-64748214 | None:intergenic | 55.0% |
| AAGGGGCCATGTGTGCATGG+AGG | - | chr2.4:64747264-64747283 | MS.gene047943:intron | 60.0% | |
| AGGGACCAGGCCCAACCTTT+GGG | + | chr2.4:64747743-64747762 | None:intergenic | 60.0% | |
| CCTCCAGACACGGATACTCC+TGG | - | chr2.4:64748193-64748212 | MS.gene047943:intron | 60.0% | |
| CGGACGAGGAAGTAGAGGAG+GGG | + | chr2.4:64745622-64745641 | None:intergenic | 60.0% | |
| GATGGAGACACGTGCGCCAT+CGG | + | chr2.4:64745740-64745759 | None:intergenic | 60.0% | |
| GCGGACGAGGAAGTAGAGGA+GGG | + | chr2.4:64745623-64745642 | None:intergenic | 60.0% | |
| GGACGAGGAAGTAGAGGAGG+GGG | + | chr2.4:64745621-64745640 | None:intergenic | 60.0% | |
| TCCAAGGGGCCATGTGTGCA+TGG | - | chr2.4:64747261-64747280 | MS.gene047943:intron | 60.0% | |
| TCCATGCACACATGGCCCCT+TGG | + | chr2.4:64747265-64747284 | None:intergenic | 60.0% | |
| TGGCGCACGTGTCTCCATCA+TGG | - | chr2.4:64745741-64745760 | MS.gene047943:intron | 60.0% | |
| !! | CCAGGAGTATCCGTGTCTGG+AGG | + | chr2.4:64748196-64748215 | None:intergenic | 60.0% |
| ACAGGCGGCTCAAGCGGCAT+CGG | - | chr2.4:64745688-64745707 | MS.gene047943:intron | 65.0% | |
| AGTAGAGGAGGGGGAGGAGG+AGG | + | chr2.4:64745612-64745631 | None:intergenic | 65.0% | |
| CAAAGGTTGGGCCTGGTCCC+TGG | - | chr2.4:64747742-64747761 | MS.gene047943:intron | 65.0% | |
| CAGGGACCAGGCCCAACCTT+TGG | + | chr2.4:64747744-64747763 | None:intergenic | 65.0% | |
| CGAGGAAGTAGAGGAGGGGG+AGG | + | chr2.4:64745618-64745637 | None:intergenic | 65.0% | |
| GGAAGTAGAGGAGGGGGAGG+AGG | + | chr2.4:64745615-64745634 | None:intergenic | 65.0% | |
| GGATCTTGATGGGGCGTGGG+CGG | + | chr2.4:64745642-64745661 | None:intergenic | 65.0% | |
| GGCGGACGAGGAAGTAGAGG+AGG | + | chr2.4:64745624-64745643 | None:intergenic | 65.0% | |
| GGTGAGGGATCGCGCCATGA+TGG | + | chr2.4:64745758-64745777 | None:intergenic | 65.0% | |
| GTGGGCGGACGAGGAAGTAG+AGG | + | chr2.4:64745627-64745646 | None:intergenic | 65.0% | |
| TTGGGCCCAAAGGTTGGGCC+TGG | - | chr2.4:64747735-64747754 | MS.gene047943:intron | 65.0% | |
| AGGAGGGGGAGGAGGAGGAG+AGG | + | chr2.4:64745607-64745626 | None:intergenic | 70.0% | |
| GGAGACACGTGCGCCATCGG+CGG | + | chr2.4:64745737-64745756 | None:intergenic | 70.0% | |
| GGAGGAGGAGGAGAGGGAGG+AGG | + | chr2.4:64745600-64745619 | None:intergenic | 70.0% | |
| GGAGGGGGAGGAGGAGGAGA+GGG | + | chr2.4:64745606-64745625 | None:intergenic | 70.0% | |
| GACACGTGCGCCATCGGCGG+CGG | + | chr2.4:64745734-64745753 | None:intergenic | 75.0% | |
| GGGGGAGGAGGAGGAGAGGG+AGG | + | chr2.4:64745603-64745622 | None:intergenic | 75.0% | |
| TGATGGGGCGTGGGCGGACG+AGG | + | chr2.4:64745636-64745655 | None:intergenic | 75.0% | |
| ! | GCCATCGGCGGCGGCACGGT+GGG | + | chr2.4:64745725-64745744 | None:intergenic | 80.0% |
| ! | GGCGGCGGCACGGTGGGCAA+GGG | + | chr2.4:64745719-64745738 | None:intergenic | 80.0% |
| ! | GTGCGCCATCGGCGGCGGCA+CGG | + | chr2.4:64745729-64745748 | None:intergenic | 80.0% |
| ! | CGCCATCGGCGGCGGCACGG+TGG | + | chr2.4:64745726-64745745 | None:intergenic | 85.0% |
| ! | CGGCGGCGGCACGGTGGGCA+AGG | + | chr2.4:64745720-64745739 | None:intergenic | 85.0% |
| ! | GCCCACCGTGCCGCCGCCGA+TGG | - | chr2.4:64745721-64745740 | MS.gene047943:intron | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 64745568 | 64750258 | 64745568 | ID=MS.gene047943 |
| chr2.4 | mRNA | 64745568 | 64750258 | 64745568 | ID=MS.gene047943.t1;Parent=MS.gene047943 |
| chr2.4 | exon | 64749734 | 64750258 | 64749734 | ID=MS.gene047943.t1.exon1;Parent=MS.gene047943.t1 |
| chr2.4 | CDS | 64749734 | 64750258 | 64749734 | ID=cds.MS.gene047943.t1;Parent=MS.gene047943.t1 |
| chr2.4 | exon | 64747600 | 64747747 | 64747600 | ID=MS.gene047943.t1.exon2;Parent=MS.gene047943.t1 |
| chr2.4 | CDS | 64747600 | 64747747 | 64747600 | ID=cds.MS.gene047943.t1;Parent=MS.gene047943.t1 |
| chr2.4 | exon | 64746846 | 64747136 | 64746846 | ID=MS.gene047943.t1.exon3;Parent=MS.gene047943.t1 |
| chr2.4 | CDS | 64746846 | 64747136 | 64746846 | ID=cds.MS.gene047943.t1;Parent=MS.gene047943.t1 |
| chr2.4 | exon | 64745568 | 64745578 | 64745568 | ID=MS.gene047943.t1.exon4;Parent=MS.gene047943.t1 |
| chr2.4 | CDS | 64745568 | 64745578 | 64745568 | ID=cds.MS.gene047943.t1;Parent=MS.gene047943.t1 |
| Gene Sequence |
| Protein sequence |
