Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003381.t1 | RHN61635.1 | 91 | 1360 | 122 | 0 | 1 | 1360 | 1 | 1360 | 1.10E-218 | 770.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003381.t1 | A0A396ID41 | 91.0 | 1360 | 122 | 0 | 1 | 1360 | 1 | 1360 | 7.7e-219 | 770.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018527 | MS.gene003381 | PPI |
| MS.gene003381 | MS.gene029842 | PPI |
| MS.gene057731 | MS.gene003381 | PPI |
| MS.gene003381 | MS.gene074085 | PPI |
| MS.gene003381 | MS.gene003500 | PPI |
| MS.gene52098 | MS.gene003381 | PPI |
| MS.gene003381 | MS.gene79182 | PPI |
| MS.gene003381 | MS.gene24596 | PPI |
| MS.gene003381 | MS.gene061924 | PPI |
| MS.gene003381 | MS.gene09818 | PPI |
| MS.gene003381 | MS.gene62509 | PPI |
| MS.gene003381 | MS.gene22490 | PPI |
| MS.gene003381 | MS.gene45415 | PPI |
| MS.gene003381 | MS.gene74439 | PPI |
| MS.gene003381 | MS.gene040402 | PPI |
| MS.gene003381 | MS.gene90953 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003381.t1 | MTR_4g076030 | 91.403 | 1361 | 77 | 3 | 1 | 1360 | 1 | 1322 | 0.0 | 2238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003381.t1 | AT2G32240 | 47.650 | 1383 | 651 | 13 | 1 | 1360 | 1 | 1333 | 0.0 | 902 |
| MS.gene003381.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 8.49e-75 | 266 |
| MS.gene003381.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 3.92e-11 | 68.2 |
| MS.gene003381.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 8.49e-75 | 266 |
| MS.gene003381.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 3.92e-11 | 68.2 |
| MS.gene003381.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 8.49e-75 | 266 |
| MS.gene003381.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 3.92e-11 | 68.2 |
| MS.gene003381.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 8.49e-75 | 266 |
| MS.gene003381.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 3.92e-11 | 68.2 |
| MS.gene003381.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 8.49e-75 | 266 |
| MS.gene003381.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 3.92e-11 | 68.2 |
| MS.gene003381.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 8.49e-75 | 266 |
| MS.gene003381.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 3.92e-11 | 68.2 |
| MS.gene003381.t1 | AT1G05320 | 33.135 | 842 | 338 | 17 | 529 | 1360 | 164 | 790 | 8.49e-75 | 266 |
| MS.gene003381.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 3.92e-11 | 68.2 |
| MS.gene003381.t1 | AT1G05320 | 30.835 | 707 | 274 | 13 | 529 | 1228 | 164 | 662 | 9.85e-49 | 186 |
| MS.gene003381.t1 | AT1G05320 | 27.907 | 731 | 314 | 19 | 599 | 1278 | 92 | 660 | 2.17e-24 | 110 |
| MS.gene003381.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 4.16e-11 | 68.2 |
| MS.gene003381.t1 | AT1G05320 | 30.835 | 707 | 274 | 13 | 529 | 1228 | 164 | 662 | 9.85e-49 | 186 |
| MS.gene003381.t1 | AT1G05320 | 27.907 | 731 | 314 | 19 | 599 | 1278 | 92 | 660 | 2.17e-24 | 110 |
| MS.gene003381.t1 | AT1G05320 | 56.522 | 69 | 30 | 0 | 156 | 224 | 60 | 128 | 4.16e-11 | 68.2 |
Find 165 sgRNAs with CRISPR-Local
Find 222 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTCCTGCATCTTCTTTC+GGG | 0.114154 | 4.1:-28220559 | None:intergenic |
| CGTTAATGCAAAACACTTTA+AGG | 0.134026 | 4.1:+28221202 | MS.gene003381:CDS |
| CTCCAATTGTGAATTCTTCT+TGG | 0.153436 | 4.1:-28221705 | None:intergenic |
| GCTTGAGAAAATCAAGATTT+TGG | 0.154559 | 4.1:+28222450 | MS.gene003381:CDS |
| GACATTGTCAAGATGTTTAT+TGG | 0.168100 | 4.1:-28221966 | None:intergenic |
| TGACTCTAAATCACTCAATT+TGG | 0.208796 | 4.1:-28223127 | None:intergenic |
| CAGCTTCTCATTCAATTCTT+TGG | 0.225739 | 4.1:-28222881 | None:intergenic |
| ACCTTTGTCACTGGAACTTC+TGG | 0.227157 | 4.1:-28219495 | None:intergenic |
| GCAATTCCTGCATCTTCTTT+CGG | 0.233038 | 4.1:-28220560 | None:intergenic |
| CTTCCTTTGTAGAGACAAAT+AGG | 0.260048 | 4.1:-28220995 | None:intergenic |
| AATCTTTATCTGTCCTTCTA+AGG | 0.265446 | 4.1:-28222908 | None:intergenic |
| GTTCTTCTAGAGAATTCTTC+AGG | 0.272845 | 4.1:-28224113 | None:intergenic |
| AACTTCCAATAGCTGTGTTT+TGG | 0.291414 | 4.1:-28220862 | None:intergenic |
| TAGCTCTATTTCACTTTCAT+TGG | 0.293235 | 4.1:-28222059 | None:intergenic |
| CTCCTGAAGTTCATCAATCT+TGG | 0.299260 | 4.1:-28222665 | None:intergenic |
| TCGGCTGCGCTCATTGTTCA+TGG | 0.309471 | 4.1:-28221780 | None:intergenic |
| ATTATCTTCGGCATCATTCT+TGG | 0.315954 | 4.1:+28224567 | MS.gene003381:CDS |
| CTGTTCAAGCTCTGAATTGT+TGG | 0.317550 | 4.1:-28221309 | None:intergenic |
| GGAGTTGTGTAGTGATTTAG+AGG | 0.324329 | 4.1:+28221223 | MS.gene003381:CDS |
| TGAACAGAAGGTGAAGTCTT+TGG | 0.324411 | 4.1:+28221325 | MS.gene003381:CDS |
| AACCAAGATTGATGAACTTC+AGG | 0.355735 | 4.1:+28222663 | MS.gene003381:CDS |
| AGCAGTGGCTGCAACGGTTC+CGG | 0.357105 | 4.1:-28221366 | None:intergenic |
| TGAAGATAGTTTGAGCAAAC+TGG | 0.358673 | 4.1:+28222525 | MS.gene003381:CDS |
| AAAGAGAAATTAGAAGAAAC+TGG | 0.365005 | 4.1:+28220351 | MS.gene003381:CDS |
| CTGATTTGATATGAGAGCTC+TGG | 0.369639 | 4.1:-28221820 | None:intergenic |
| TTTGCAGGTTGGAAGTGTTC+AGG | 0.372826 | 4.1:+28223770 | MS.gene003381:intron |
| CATCCCTCACAATTTCCAAT+AGG | 0.377955 | 4.1:-28222171 | None:intergenic |
| ACTCTCCAAAACACAGCTAT+TGG | 0.381076 | 4.1:+28220857 | MS.gene003381:CDS |
| AACAGAGAAATACAGAATTC+AGG | 0.386994 | 4.1:+28221886 | MS.gene003381:CDS |
| TCAGAAAGATGAAAGCATTA+AGG | 0.387510 | 4.1:+28219533 | MS.gene003381:CDS |
| ATGAATTTCAAGTTCATCCT+TGG | 0.388092 | 4.1:+28224528 | MS.gene003381:CDS |
| TCTTCTTAATAGCCTATTGC+AGG | 0.390574 | 4.1:+28221634 | MS.gene003381:CDS |
| GCTCCTTCAACTTCTCTTCA+AGG | 0.391948 | 4.1:-28223490 | None:intergenic |
| TTCAAGGATGCGAGCTTCAT+TGG | 0.397888 | 4.1:-28222803 | None:intergenic |
| TATCCATGTGCTCCTGCAAT+AGG | 0.401274 | 4.1:-28221646 | None:intergenic |
| TTCATTGGCAGAATGAGTTT+CGG | 0.401937 | 4.1:-28222788 | None:intergenic |
| TGCTGATAAGAAAGATGCTT+TGG | 0.407101 | 4.1:+28224371 | MS.gene003381:CDS |
| TTTGCTTGAGATATTTCCTT+AGG | 0.410691 | 4.1:-28220093 | None:intergenic |
| TTCTCTGAAGGAAGAATTGA+AGG | 0.417486 | 4.1:+28220743 | MS.gene003381:CDS |
| TGCTGAGTCAGAAAACCTAT+TGG | 0.417564 | 4.1:+28222156 | MS.gene003381:CDS |
| ATCCAAGAAGAATTCACAAT+TGG | 0.425360 | 4.1:+28221703 | MS.gene003381:CDS |
| TAAGCAGAAAGAGCTTCTTC+AGG | 0.430704 | 4.1:+28220494 | MS.gene003381:CDS |
| GGATCAAATCTTCTAGTTCT+CGG | 0.433255 | 4.1:-28221799 | None:intergenic |
| CACGTCTCTCTCAGCATCAT+TGG | 0.434485 | 4.1:-28221546 | None:intergenic |
| CTTTCGCAGGTTTAATTCCT+CGG | 0.435688 | 4.1:-28220928 | None:intergenic |
| CTTCAGGTGAAGGAAGCGTT+TGG | 0.438245 | 4.1:+28220510 | MS.gene003381:CDS |
| GAGAAGCTGAATACCTTAGA+AGG | 0.440315 | 4.1:+28222895 | MS.gene003381:CDS |
| GAAGATCTTCATAGTGAATC+CGG | 0.442202 | 4.1:+28221347 | MS.gene003381:CDS |
| CGAAGTTACATTGAAGAGTC+AGG | 0.445795 | 4.1:+28221094 | MS.gene003381:CDS |
| GATAAAGATTTACGAAGAAC+AGG | 0.446009 | 4.1:+28222921 | MS.gene003381:CDS |
| AGGAGCAGAATCTCAGAAGT+TGG | 0.446189 | 4.1:+28224077 | MS.gene003381:CDS |
| TGACCTTGAAGAGAAGTTGA+AGG | 0.447342 | 4.1:+28223487 | MS.gene003381:CDS |
| TTGAAGAAAATCTTGCTGTA+AGG | 0.447582 | 4.1:+28222290 | MS.gene003381:CDS |
| CAAAGAAGTCTTGAGCTTGA+AGG | 0.448234 | 4.1:+28221392 | MS.gene003381:CDS |
| TTATCTTCGGCATCATTCTT+GGG | 0.450792 | 4.1:+28224568 | MS.gene003381:CDS |
| ATTTCTTGAAGCACAAGAAA+AGG | 0.451611 | 4.1:+28220233 | MS.gene003381:CDS |
| AGCTTCTTGGAGCTTCTGTT+CGG | 0.458835 | 4.1:-28222386 | None:intergenic |
| ATGAACTTGAAATTCATGAT+AGG | 0.461531 | 4.1:-28224522 | None:intergenic |
| AGGAAAATATCGCAGGAGCC+GGG | 0.462123 | 4.1:+28222473 | MS.gene003381:CDS |
| ATGCTTTGTCACCAAGTCTT+CGG | 0.464198 | 4.1:-28223217 | None:intergenic |
| TGAAGCACAAGAAAAGGTTC+AGG | 0.464668 | 4.1:+28220239 | MS.gene003381:CDS |
| GTGAAAATGAAGATTTGAAA+AGG | 0.466244 | 4.1:+28222560 | MS.gene003381:CDS |
| TGCTGAAGGAGTTGTCGCTT+CGG | 0.467033 | 4.1:-28224454 | None:intergenic |
| GCTCTTGTATCGATTATCTT+CGG | 0.469158 | 4.1:+28224555 | MS.gene003381:CDS |
| TGCAAAGGTCAAGCTGCAAA+TGG | 0.470134 | 4.1:+28221049 | MS.gene003381:CDS |
| AGAAATCTGCATTGCAAAGT+AGG | 0.472811 | 4.1:+28223573 | MS.gene003381:CDS |
| GAGGAAAATATCGCAGGAGC+CGG | 0.475802 | 4.1:+28222472 | MS.gene003381:CDS |
| TGTCACTGGAACTTCTGGAA+TGG | 0.476798 | 4.1:-28219490 | None:intergenic |
| CAAGAAGAATTCACAATTGG+AGG | 0.477966 | 4.1:+28221706 | MS.gene003381:CDS |
| GACCTTTGCACTTTCCAACT+CGG | 0.479242 | 4.1:-28221036 | None:intergenic |
| GAGCGTGAAACAGAAACTGC+TGG | 0.486300 | 4.1:+28223054 | MS.gene003381:CDS |
| TCTTCGACAACCTTTGTCAC+TGG | 0.486601 | 4.1:-28219504 | None:intergenic |
| TTCTTCTAGAGAATTCTTCA+GGG | 0.493169 | 4.1:-28224112 | None:intergenic |
| TGAAGAAAATCTTGCTGTAA+GGG | 0.499819 | 4.1:+28222291 | MS.gene003381:CDS |
| AAAGAATGCTGCCGAAGACT+TGG | 0.501472 | 4.1:+28223206 | MS.gene003381:CDS |
| TACAAATGCAGCTGCAGAAG+AGG | 0.503485 | 4.1:+28221427 | MS.gene003381:CDS |
| CGCTAAATTGAAAGAGGCTG+AGG | 0.504259 | 4.1:+28221601 | MS.gene003381:CDS |
| TGCATTGCAAAGTAGGCTGC+AGG | 0.508198 | 4.1:+28223580 | MS.gene003381:CDS |
| CTCTGCTGCACTTGTCGAGA+AGG | 0.509330 | 4.1:+28223155 | MS.gene003381:CDS |
| CCTTGAAAATACACTGCAAA+CGG | 0.519186 | 4.1:+28222036 | MS.gene003381:CDS |
| TAAGATTGCTGAAAATCAAA+AGG | 0.520332 | 4.1:+28220776 | MS.gene003381:CDS |
| ACTCGAGGTTGAACTGAAAA+CGG | 0.522297 | 4.1:+28220263 | MS.gene003381:CDS |
| GCATCTCATCTCCATCGAAA+AGG | 0.522651 | 4.1:+28224415 | MS.gene003381:CDS |
| TCTGAGAATGAATTACTGGT+TGG | 0.524968 | 4.1:+28222622 | MS.gene003381:CDS |
| CGAGAAGGAAGAGAATGTGT+TGG | 0.526731 | 4.1:+28220161 | MS.gene003381:CDS |
| ATCTCAGAAGTTGGAACTAG+AGG | 0.533512 | 4.1:+28224086 | MS.gene003381:CDS |
| CAATTCAGAGCTTGAACAGA+AGG | 0.537146 | 4.1:+28221313 | MS.gene003381:CDS |
| TATCAACATGCAGATATCTT+CGG | 0.537292 | 4.1:+28223394 | MS.gene003381:intron |
| ATTAAACCTGCGAAAGACTT+CGG | 0.538292 | 4.1:+28220935 | MS.gene003381:CDS |
| AGAAGAGGCACGGAAGTTCG+AGG | 0.538325 | 4.1:+28220605 | MS.gene003381:CDS |
| GCTTCAAGAAATTCTCTGCT+AGG | 0.538939 | 4.1:-28220222 | None:intergenic |
| AAATGCAGACTTGCTGCCTA+AGG | 0.539681 | 4.1:+28220077 | MS.gene003381:CDS |
| TGAAGAATCTTTGAAATCTG+AGG | 0.541805 | 4.1:+28223523 | MS.gene003381:CDS |
| TGAAACTCGTAAAGCTGAGC+TGG | 0.545288 | 4.1:+28222966 | MS.gene003381:CDS |
| AGATGAGATGGCTTCTCTGA+AGG | 0.546613 | 4.1:+28220731 | MS.gene003381:CDS |
| TCTCGACGCTAAATTGAAAG+AGG | 0.548418 | 4.1:+28221595 | MS.gene003381:CDS |
| TTGACTAGCAGTGGCTGCAA+CGG | 0.548735 | 4.1:-28221372 | None:intergenic |
| CATGATAGGCGAATCATGGC+CGG | 0.549925 | 4.1:-28224508 | None:intergenic |
| GGTGGCTCGATCTTCATGCT+CGG | 0.550471 | 4.1:-28221759 | None:intergenic |
| AATTCATGATAGGCGAATCA+TGG | 0.551384 | 4.1:-28224512 | None:intergenic |
| ACATGAAAACTCTCAGCTGA+AGG | 0.555752 | 4.1:+28220311 | MS.gene003381:CDS |
| TAGCCTATTGCAGGAGCACA+TGG | 0.556000 | 4.1:+28221643 | MS.gene003381:CDS |
| GTGTTTCCGAAGTCTTTCGC+AGG | 0.559992 | 4.1:-28220941 | None:intergenic |
| AGAATCTTTAAATGCTGTGA+CGG | 0.560483 | 4.1:+28222084 | MS.gene003381:CDS |
| TTTAATGAATTCTCCATCTG+AGG | 0.560486 | 4.1:-28220136 | None:intergenic |
| TGCTGAATCTGAGGGAAACA+AGG | 0.561032 | 4.1:+28220653 | MS.gene003381:CDS |
| GAAAGAGCTTCTTCAGGTGA+AGG | 0.561755 | 4.1:+28220500 | MS.gene003381:CDS |
| GACTAATCAGAATCTAAAGA+AGG | 0.563008 | 4.1:+28223445 | MS.gene003381:CDS |
| AGAACTTTCTACTATTCAAG+AGG | 0.563186 | 4.1:+28220827 | MS.gene003381:CDS |
| TGGTTCACATGCTGAATCTG+AGG | 0.565365 | 4.1:+28220644 | MS.gene003381:CDS |
| AGAAACTGCTGGAATAAATG+AGG | 0.568461 | 4.1:+28223065 | MS.gene003381:CDS |
| GCAGCTCAGCACTCTTGAAG+AGG | 0.568901 | 4.1:+28220452 | MS.gene003381:CDS |
| AATAAATGTGCTGAATGAAA+AGG | 0.569294 | 4.1:+28223860 | MS.gene003381:CDS |
| GCCGGCTTGAATATGAGTCT+CGG | 0.570313 | 4.1:-28224490 | None:intergenic |
| TCCGAGACTCATATTCAAGC+CGG | 0.571427 | 4.1:+28224489 | MS.gene003381:CDS |
| GGAAAATATCGCAGGAGCCG+GGG | 0.572012 | 4.1:+28222474 | MS.gene003381:CDS |
| TCCAGAAGTTCCAGTGACAA+AGG | 0.573505 | 4.1:+28219494 | MS.gene003381:CDS |
| TTCCGAGTTGGAAAGTGCAA+AGG | 0.574527 | 4.1:+28221034 | MS.gene003381:CDS |
| CGAAAAGAGAGTGAGTGAGT+TGG | 0.577125 | 4.1:+28221850 | MS.gene003381:CDS |
| TGAATCTAGACTACATGAAG+AGG | 0.577959 | 4.1:+28223628 | MS.gene003381:CDS |
| AAACCTATTTGTCTCTACAA+AGG | 0.578347 | 4.1:+28220992 | MS.gene003381:CDS |
| GAGGAAGATAATGCCTCAGA+TGG | 0.578707 | 4.1:+28220123 | MS.gene003381:CDS |
| AAGACTTCTTTGACTAGCAG+TGG | 0.580395 | 4.1:-28221381 | None:intergenic |
| GAAATTGAGTGCGAAAAGCA+TGG | 0.585105 | 4.1:+28220707 | MS.gene003381:CDS |
| AGTGCAGACATTGAAGTCAC+AGG | 0.585831 | 4.1:+28223248 | MS.gene003381:CDS |
| CATGAAAACTCTCAGCTGAA+GGG | 0.588485 | 4.1:+28220312 | MS.gene003381:CDS |
| AAAACCTATTGGAAATTGTG+AGG | 0.589441 | 4.1:+28222167 | MS.gene003381:CDS |
| GAACAGTGTTCTGTCAGAGA+AGG | 0.595509 | 4.1:+28222693 | MS.gene003381:CDS |
| TGATGAGAAAATCTCAGTCA+AGG | 0.597191 | 4.1:+28224209 | MS.gene003381:CDS |
| GAAGAATTCACAATTGGAGG+AGG | 0.597266 | 4.1:+28221709 | MS.gene003381:CDS |
| AATGATGTTGCAGGGTGAGG+AGG | 0.597607 | 4.1:+28224347 | MS.gene003381:intron |
| AGAATTCATTAAAGTCGAGA+AGG | 0.598167 | 4.1:+28220146 | MS.gene003381:CDS |
| AAACCTATTGGAAATTGTGA+GGG | 0.599739 | 4.1:+28222168 | MS.gene003381:CDS |
| GAAAAGCATGGAAGATGAGA+TGG | 0.600212 | 4.1:+28220719 | MS.gene003381:CDS |
| GCTGCAACTTTCTACAGAAG+AGG | 0.602865 | 4.1:+28220590 | MS.gene003381:CDS |
| GACAAAGGTTGTCGAAGAGG+TGG | 0.604844 | 4.1:+28219509 | MS.gene003381:CDS |
| GCATCTTGAAGCAGTAGTTG+AGG | 0.605915 | 4.1:+28223011 | MS.gene003381:CDS |
| AAGCTCCCGAAAGAAGATGC+AGG | 0.607019 | 4.1:+28220554 | MS.gene003381:CDS |
| ATTGGCAGAATGAGTTTCGG+AGG | 0.607463 | 4.1:-28222785 | None:intergenic |
| ATATAGAGCTTACTTCTGCA+AGG | 0.608300 | 4.1:+28222320 | MS.gene003381:CDS |
| GGATGATTTAAATCTTACAC+AGG | 0.610338 | 4.1:+28222189 | MS.gene003381:CDS |
| ACTCAATTTGGACTCATAGA+CGG | 0.610740 | 4.1:-28223115 | None:intergenic |
| ATGATGTTGCAGGGTGAGGA+GGG | 0.615465 | 4.1:+28224348 | MS.gene003381:intron |
| GATGAAGAAGTTGATGCTGA+AGG | 0.615729 | 4.1:-28224468 | None:intergenic |
| ATTAACGGTTAGATCTTCAA+CGG | 0.617286 | 4.1:-28221186 | None:intergenic |
| ACAGACTACTATAGCTAACC+AGG | 0.618050 | 4.1:+28223914 | MS.gene003381:CDS |
| AGTGACAAAGGTTGTCGAAG+AGG | 0.618117 | 4.1:+28219506 | MS.gene003381:CDS |
| GGTTCACATGCTGAATCTGA+GGG | 0.619554 | 4.1:+28220645 | MS.gene003381:CDS |
| GAAGAAAATCTTGCTGTAAG+GGG | 0.624970 | 4.1:+28222292 | MS.gene003381:CDS |
| AGCGGCAGAGCAAAAGAATG+TGG | 0.626530 | 4.1:+28221487 | MS.gene003381:CDS |
| TCAAGAAATTCTCTGCTAGG+AGG | 0.630636 | 4.1:-28220219 | None:intergenic |
| ATTGCAGAAGCATACTGAGA+AGG | 0.631122 | 4.1:+28222849 | MS.gene003381:CDS |
| CAAAGATATAGACTGTTCCC+CGG | 0.633474 | 4.1:-28222491 | None:intergenic |
| AACTTTCTACAGAAGAGGCA+CGG | 0.647127 | 4.1:+28220595 | MS.gene003381:CDS |
| AAAGGTCAAGCTGCAAATGG+AGG | 0.650695 | 4.1:+28221052 | MS.gene003381:CDS |
| TCGATACAAGAGCTACTCCA+AGG | 0.657381 | 4.1:-28224545 | None:intergenic |
| AGAAAAGGTTCAGGAACTCG+AGG | 0.663782 | 4.1:+28220248 | MS.gene003381:CDS |
| GCTGCGCTCATTGTTCATGG+TGG | 0.678043 | 4.1:-28221777 | None:intergenic |
| TCTCTGAAGGAAGAATTGAA+GGG | 0.679949 | 4.1:+28220744 | MS.gene003381:CDS |
| AAATGTGCTGAATGAAAAGG+TGG | 0.682430 | 4.1:+28223863 | MS.gene003381:CDS |
| GAGGAGCTGCATAAGCAAAG+TGG | 0.685020 | 4.1:+28220624 | MS.gene003381:CDS |
| ATCTCAAGCAAAGAAAGACG+AGG | 0.694382 | 4.1:+28220104 | MS.gene003381:CDS |
| TCTAGTAGACAAGTTGACCG+AGG | 0.716796 | 4.1:+28220911 | MS.gene003381:CDS |
| GCTTGAAACACGCTTCATAG+CGG | 0.723520 | 4.1:+28221469 | MS.gene003381:CDS |
| TGAATCTGAGGGAAACAAGG+CGG | 0.749133 | 4.1:+28220656 | MS.gene003381:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAGTATACATAATTAC+TGG | - | chr4.1:28219637-28219656 | None:intergenic | 15.0% |
| !! | AAGGAAAAATAAAGGAATAT+CGG | - | chr4.1:28223282-28223301 | None:intergenic | 20.0% |
| !! | TTTCTTAAAAAAAAGCAGAA+AGG | + | chr4.1:28224057-28224076 | MS.gene003381:intron | 20.0% |
| !!! | ATTGTTTTATGATTTATTGC+AGG | + | chr4.1:28220050-28220069 | MS.gene003381:intron | 20.0% |
| !!! | TGATCATTTTGTATAAACTA+TGG | + | chr4.1:28223342-28223361 | MS.gene003381:intron | 20.0% |
| ! | AAAGAGAAATTAGAAGAAAC+TGG | + | chr4.1:28220351-28220370 | MS.gene003381:CDS | 25.0% |
| ! | AATAAATGTGCTGAATGAAA+AGG | + | chr4.1:28223860-28223879 | MS.gene003381:CDS | 25.0% |
| ! | AGTTGTATTGAGATTATTAG+CGG | + | chr4.1:28219841-28219860 | MS.gene003381:intron | 25.0% |
| ! | ATGAACTTGAAATTCATGAT+AGG | - | chr4.1:28224525-28224544 | None:intergenic | 25.0% |
| ! | GAAGTAGAAAGGAAAAATAA+AGG | - | chr4.1:28223290-28223309 | None:intergenic | 25.0% |
| ! | GTGAAAATGAAGATTTGAAA+AGG | + | chr4.1:28222560-28222579 | MS.gene003381:CDS | 25.0% |
| ! | TAAGATTGCTGAAAATCAAA+AGG | + | chr4.1:28220776-28220795 | MS.gene003381:CDS | 25.0% |
| ! | TTAAGCATAAGCAAAATGAA+TGG | + | chr4.1:28219994-28220013 | MS.gene003381:intron | 25.0% |
| ! | TTACAAAATTATCCGAGATT+TGG | - | chr4.1:28224242-28224261 | None:intergenic | 25.0% |
| !! | AAGTTATTTCACTTCTGAAT+TGG | - | chr4.1:28223690-28223709 | None:intergenic | 25.0% |
| !! | TAATTTTCTCTATAGCTTCT+TGG | - | chr4.1:28222402-28222421 | None:intergenic | 25.0% |
| !! | TTAATGATTGCGTAAGTTTT+TGG | + | chr4.1:28219677-28219696 | MS.gene003381:intron | 25.0% |
| !!! | ATTTTCTGAGAATGAATTAC+TGG | + | chr4.1:28222618-28222637 | MS.gene003381:CDS | 25.0% |
| !!! | CACTTAAAACAGTATTGATT+AGG | + | chr4.1:28219912-28219931 | MS.gene003381:intron | 25.0% |
| !!! | CATGTTGATAACATTTGATT+GGG | - | chr4.1:28223384-28223403 | None:intergenic | 25.0% |
| !!! | CTTAAAGTGTTTTGCATTAA+CGG | - | chr4.1:28221204-28221223 | None:intergenic | 25.0% |
| !!! | GCAATTTTGATTCTATTTCA+AGG | - | chr4.1:28222822-28222841 | None:intergenic | 25.0% |
| AAAACCTATTGGAAATTGTG+AGG | + | chr4.1:28222167-28222186 | MS.gene003381:CDS | 30.0% | |
| AAACCTATTGGAAATTGTGA+GGG | + | chr4.1:28222168-28222187 | MS.gene003381:CDS | 30.0% | |
| AAACCTATTTGTCTCTACAA+AGG | + | chr4.1:28220992-28221011 | MS.gene003381:CDS | 30.0% | |
| AACAGAGAAATACAGAATTC+AGG | + | chr4.1:28221886-28221905 | MS.gene003381:CDS | 30.0% | |
| AACTAGCAATAGAAGTAGAA+AGG | - | chr4.1:28223301-28223320 | None:intergenic | 30.0% | |
| AAGCTTAATGCAGAGAAAAA+AGG | + | chr4.1:28221152-28221171 | MS.gene003381:CDS | 30.0% | |
| AATCTTTATCTGTCCTTCTA+AGG | - | chr4.1:28222911-28222930 | None:intergenic | 30.0% | |
| AGAACTTTCTACTATTCAAG+AGG | + | chr4.1:28220827-28220846 | MS.gene003381:CDS | 30.0% | |
| AGAATCTTTAAATGCTGTGA+CGG | + | chr4.1:28222084-28222103 | MS.gene003381:CDS | 30.0% | |
| AGAATTCATTAAAGTCGAGA+AGG | + | chr4.1:28220146-28220165 | MS.gene003381:CDS | 30.0% | |
| AGAGGAAAAACTAAAGCTTT+CGG | + | chr4.1:28221241-28221260 | MS.gene003381:CDS | 30.0% | |
| ATCCAAGAAGAATTCACAAT+TGG | + | chr4.1:28221703-28221722 | MS.gene003381:CDS | 30.0% | |
| ATTAACGGTTAGATCTTCAA+CGG | - | chr4.1:28221189-28221208 | None:intergenic | 30.0% | |
| ATTTCTTGAAGCACAAGAAA+AGG | + | chr4.1:28220233-28220252 | MS.gene003381:CDS | 30.0% | |
| CATTTATAGGACAGAAATGA+AGG | + | chr4.1:28219764-28219783 | MS.gene003381:intron | 30.0% | |
| CGTTAATGCAAAACACTTTA+AGG | + | chr4.1:28221202-28221221 | MS.gene003381:CDS | 30.0% | |
| GACATTGTCAAGATGTTTAT+TGG | - | chr4.1:28221969-28221988 | None:intergenic | 30.0% | |
| GACTAATCAGAATCTAAAGA+AGG | + | chr4.1:28223445-28223464 | MS.gene003381:CDS | 30.0% | |
| GATAAAGATTTACGAAGAAC+AGG | + | chr4.1:28222921-28222940 | MS.gene003381:CDS | 30.0% | |
| GGATGATTTAAATCTTACAC+AGG | + | chr4.1:28222189-28222208 | MS.gene003381:CDS | 30.0% | |
| TATCAACATGCAGATATCTT+CGG | + | chr4.1:28223394-28223413 | MS.gene003381:intron | 30.0% | |
| TGACTCTAAATCACTCAATT+TGG | - | chr4.1:28223130-28223149 | None:intergenic | 30.0% | |
| TTAATGACTTGATGTTCAAG+TGG | - | chr4.1:28219978-28219997 | None:intergenic | 30.0% | |
| TTTAATGAATTCTCCATCTG+AGG | - | chr4.1:28220139-28220158 | None:intergenic | 30.0% | |
| TTTGCTTGAGATATTTCCTT+AGG | - | chr4.1:28220096-28220115 | None:intergenic | 30.0% | |
| ! | AACAGATTCTCTTTTATCTC+AGG | + | chr4.1:28221280-28221299 | MS.gene003381:CDS | 30.0% |
| ! | CATTTTCTAATGATGTTGCA+GGG | + | chr4.1:28224339-28224358 | MS.gene003381:intron | 30.0% |
| ! | GCTTGAGAAAATCAAGATTT+TGG | + | chr4.1:28222450-28222469 | MS.gene003381:CDS | 30.0% |
| ! | GGAAAAATTGAAACTTGTTC+AGG | + | chr4.1:28223086-28223105 | MS.gene003381:CDS | 30.0% |
| ! | TACAGCAAGATTTTCTTCAA+TGG | - | chr4.1:28222290-28222309 | None:intergenic | 30.0% |
| ! | TAGCTCTATTTCACTTTCAT+TGG | - | chr4.1:28222062-28222081 | None:intergenic | 30.0% |
| ! | TGAAGAAAATCTTGCTGTAA+GGG | + | chr4.1:28222291-28222310 | MS.gene003381:CDS | 30.0% |
| ! | TGAGAAAATCAAGATTTTGG+AGG | + | chr4.1:28222453-28222472 | MS.gene003381:CDS | 30.0% |
| ! | TTCTTCTAGAGAATTCTTCA+GGG | - | chr4.1:28224115-28224134 | None:intergenic | 30.0% |
| ! | TTGAAGAAAATCTTGCTGTA+AGG | + | chr4.1:28222290-28222309 | MS.gene003381:CDS | 30.0% |
| !! | ATGAATTTCAAGTTCATCCT+TGG | + | chr4.1:28224528-28224547 | MS.gene003381:CDS | 30.0% |
| !! | GCATGTTGATAACATTTGAT+TGG | - | chr4.1:28223385-28223404 | None:intergenic | 30.0% |
| !! | TCAGAAAGATGAAAGCATTA+AGG | + | chr4.1:28219533-28219552 | MS.gene003381:CDS | 30.0% |
| !! | TGAAGAATCTTTGAAATCTG+AGG | + | chr4.1:28223523-28223542 | MS.gene003381:CDS | 30.0% |
| !!! | CTGCAGATTGTATTTTTTCT+CGG | - | chr4.1:28220436-28220455 | None:intergenic | 30.0% |
| !!! | GCACTTGTTTTACAAAACAT+AGG | - | chr4.1:28223668-28223687 | None:intergenic | 30.0% |
| AAATGTGCTGAATGAAAAGG+TGG | + | chr4.1:28223863-28223882 | MS.gene003381:CDS | 35.0% | |
| AACCAAGATTGATGAACTTC+AGG | + | chr4.1:28222663-28222682 | MS.gene003381:CDS | 35.0% | |
| AATGAATCCTACGCTAACAA+GGG | - | chr4.1:28224275-28224294 | None:intergenic | 35.0% | |
| AATGCAGAGAAAAAAGGACT+TGG | + | chr4.1:28221158-28221177 | MS.gene003381:CDS | 35.0% | |
| AATTCATGATAGGCGAATCA+TGG | - | chr4.1:28224515-28224534 | None:intergenic | 35.0% | |
| ACAAGAAAAAGTTTCCGAGT+TGG | + | chr4.1:28221022-28221041 | MS.gene003381:CDS | 35.0% | |
| ACTCAATTTGGACTCATAGA+CGG | - | chr4.1:28223118-28223137 | None:intergenic | 35.0% | |
| AGAAACTGCTGGAATAAATG+AGG | + | chr4.1:28223065-28223084 | MS.gene003381:CDS | 35.0% | |
| AGAAATCTGCATTGCAAAGT+AGG | + | chr4.1:28223573-28223592 | MS.gene003381:CDS | 35.0% | |
| ATATAGAGCTTACTTCTGCA+AGG | + | chr4.1:28222320-28222339 | MS.gene003381:CDS | 35.0% | |
| ATGCAGAGAAAAAAGGACTT+GGG | + | chr4.1:28221159-28221178 | MS.gene003381:CDS | 35.0% | |
| ATTAAACCTGCGAAAGACTT+CGG | + | chr4.1:28220935-28220954 | MS.gene003381:CDS | 35.0% | |
| ATTATCTTCGGCATCATTCT+TGG | + | chr4.1:28224567-28224586 | MS.gene003381:CDS | 35.0% | |
| CAAGAAGAATTCACAATTGG+AGG | + | chr4.1:28221706-28221725 | MS.gene003381:CDS | 35.0% | |
| CAAGGTAACTATCCAAATCT+CGG | + | chr4.1:28224227-28224246 | MS.gene003381:intron | 35.0% | |
| CAGCTTCTCATTCAATTCTT+TGG | - | chr4.1:28222884-28222903 | None:intergenic | 35.0% | |
| CCTTGAAAATACACTGCAAA+CGG | + | chr4.1:28222036-28222055 | MS.gene003381:CDS | 35.0% | |
| CTCCAATTGTGAATTCTTCT+TGG | - | chr4.1:28221708-28221727 | None:intergenic | 35.0% | |
| CTTCCTTTGTAGAGACAAAT+AGG | - | chr4.1:28220998-28221017 | None:intergenic | 35.0% | |
| GAAGATCTTCATAGTGAATC+CGG | + | chr4.1:28221347-28221366 | MS.gene003381:CDS | 35.0% | |
| TAATTTACCCTTGTTAGCGT+AGG | + | chr4.1:28224265-28224284 | MS.gene003381:intron | 35.0% | |
| TCAGCATACAAGAACAACAT+TGG | - | chr4.1:28223984-28224003 | None:intergenic | 35.0% | |
| TCTGAGAATGAATTACTGGT+TGG | + | chr4.1:28222622-28222641 | MS.gene003381:CDS | 35.0% | |
| TCTTCTTAATAGCCTATTGC+AGG | + | chr4.1:28221634-28221653 | MS.gene003381:CDS | 35.0% | |
| TGAAGATAGTTTGAGCAAAC+TGG | + | chr4.1:28222525-28222544 | MS.gene003381:CDS | 35.0% | |
| TGAATCTAGACTACATGAAG+AGG | + | chr4.1:28223628-28223647 | MS.gene003381:CDS | 35.0% | |
| TGATGAGAAAATCTCAGTCA+AGG | + | chr4.1:28224209-28224228 | MS.gene003381:CDS | 35.0% | |
| TGCTGATAAGAAAGATGCTT+TGG | + | chr4.1:28224371-28224390 | MS.gene003381:CDS | 35.0% | |
| TTATCTTCGGCATCATTCTT+GGG | + | chr4.1:28224568-28224587 | MS.gene003381:CDS | 35.0% | |
| TTCAAGTGGTGATCAACTAA+AGG | - | chr4.1:28219964-28219983 | None:intergenic | 35.0% | |
| TTCATTGGCAGAATGAGTTT+CGG | - | chr4.1:28222791-28222810 | None:intergenic | 35.0% | |
| ! | AACTTCCAATAGCTGTGTTT+TGG | - | chr4.1:28220865-28220884 | None:intergenic | 35.0% |
| ! | GAAGAAAATCTTGCTGTAAG+GGG | + | chr4.1:28222292-28222311 | MS.gene003381:CDS | 35.0% |
| ! | GCATTTTCTAATGATGTTGC+AGG | + | chr4.1:28224338-28224357 | MS.gene003381:intron | 35.0% |
| ! | GTCGAGATGAGATATTTTCT+CGG | - | chr4.1:28221582-28221601 | None:intergenic | 35.0% |
| ! | GTTCTTCTAGAGAATTCTTC+AGG | - | chr4.1:28224116-28224135 | None:intergenic | 35.0% |
| ! | TCTCTGAAGGAAGAATTGAA+GGG | + | chr4.1:28220744-28220763 | MS.gene003381:CDS | 35.0% |
| ! | TTCTCTGAAGGAAGAATTGA+AGG | + | chr4.1:28220743-28220762 | MS.gene003381:CDS | 35.0% |
| !! | ATTTTGGAGGAAAATATCGC+AGG | + | chr4.1:28222466-28222485 | MS.gene003381:CDS | 35.0% |
| !! | GCTCTTGTATCGATTATCTT+CGG | + | chr4.1:28224555-28224574 | MS.gene003381:CDS | 35.0% |
| !! | GGATCAAATCTTCTAGTTCT+CGG | - | chr4.1:28221802-28221821 | None:intergenic | 35.0% |
| !! | TGAGCTTCTTTCAGTTTTGT+GGG | - | chr4.1:28220196-28220215 | None:intergenic | 35.0% |
| AACTTTCTACAGAAGAGGCA+CGG | + | chr4.1:28220595-28220614 | MS.gene003381:CDS | 40.0% | |
| AAGACTTCTTTGACTAGCAG+TGG | - | chr4.1:28221384-28221403 | None:intergenic | 40.0% | |
| ACAGACTACTATAGCTAACC+AGG | + | chr4.1:28223914-28223933 | MS.gene003381:CDS | 40.0% | |
| ACATGAAAACTCTCAGCTGA+AGG | + | chr4.1:28220311-28220330 | MS.gene003381:CDS | 40.0% | |
| ACTCGAGGTTGAACTGAAAA+CGG | + | chr4.1:28220263-28220282 | MS.gene003381:CDS | 40.0% | |
| ACTCTCCAAAACACAGCTAT+TGG | + | chr4.1:28220857-28220876 | MS.gene003381:CDS | 40.0% | |
| ATCTCAAGCAAAGAAAGACG+AGG | + | chr4.1:28220104-28220123 | MS.gene003381:CDS | 40.0% | |
| ATCTCAGAAGTTGGAACTAG+AGG | + | chr4.1:28224086-28224105 | MS.gene003381:CDS | 40.0% | |
| ATGCTTTGTCACCAAGTCTT+CGG | - | chr4.1:28223220-28223239 | None:intergenic | 40.0% | |
| CAAAGAAGTCTTGAGCTTGA+AGG | + | chr4.1:28221392-28221411 | MS.gene003381:CDS | 40.0% | |
| CAAAGATATAGACTGTTCCC+CGG | - | chr4.1:28222494-28222513 | None:intergenic | 40.0% | |
| CAATGAATCCTACGCTAACA+AGG | - | chr4.1:28224276-28224295 | None:intergenic | 40.0% | |
| CAATTCAGAGCTTGAACAGA+AGG | + | chr4.1:28221313-28221332 | MS.gene003381:CDS | 40.0% | |
| CAATTCCTGCATCTTCTTTC+GGG | - | chr4.1:28220562-28220581 | None:intergenic | 40.0% | |
| CATCCCTCACAATTTCCAAT+AGG | - | chr4.1:28222174-28222193 | None:intergenic | 40.0% | |
| CATGAAAACTCTCAGCTGAA+GGG | + | chr4.1:28220312-28220331 | MS.gene003381:CDS | 40.0% | |
| CGAAGTTACATTGAAGAGTC+AGG | + | chr4.1:28221094-28221113 | MS.gene003381:CDS | 40.0% | |
| CTCCTGAAGTTCATCAATCT+TGG | - | chr4.1:28222668-28222687 | None:intergenic | 40.0% | |
| CTTTCGCAGGTTTAATTCCT+CGG | - | chr4.1:28220931-28220950 | None:intergenic | 40.0% | |
| GAAATGAAGGAGATGTGTTC+TGG | + | chr4.1:28219777-28219796 | MS.gene003381:intron | 40.0% | |
| GAAATTGAGTGCGAAAAGCA+TGG | + | chr4.1:28220707-28220726 | MS.gene003381:CDS | 40.0% | |
| GAAGAATTCACAATTGGAGG+AGG | + | chr4.1:28221709-28221728 | MS.gene003381:CDS | 40.0% | |
| GAGAAGCTGAATACCTTAGA+AGG | + | chr4.1:28222895-28222914 | MS.gene003381:CDS | 40.0% | |
| GCAATTCCTGCATCTTCTTT+CGG | - | chr4.1:28220563-28220582 | None:intergenic | 40.0% | |
| GCTTCAAGAAATTCTCTGCT+AGG | - | chr4.1:28220225-28220244 | None:intergenic | 40.0% | |
| GGAAAAACTAAAGCTTTCGG+AGG | + | chr4.1:28221244-28221263 | MS.gene003381:CDS | 40.0% | |
| GGAGTTGTGTAGTGATTTAG+AGG | + | chr4.1:28221223-28221242 | MS.gene003381:CDS | 40.0% | |
| TAAGCAGAAAGAGCTTCTTC+AGG | + | chr4.1:28220494-28220513 | MS.gene003381:CDS | 40.0% | |
| TCAAGAAATTCTCTGCTAGG+AGG | - | chr4.1:28220222-28220241 | None:intergenic | 40.0% | |
| TCTCGACGCTAAATTGAAAG+AGG | + | chr4.1:28221595-28221614 | MS.gene003381:CDS | 40.0% | |
| TGAACAGAAGGTGAAGTCTT+TGG | + | chr4.1:28221325-28221344 | MS.gene003381:CDS | 40.0% | |
| TGAAGCACAAGAAAAGGTTC+AGG | + | chr4.1:28220239-28220258 | MS.gene003381:CDS | 40.0% | |
| TGACCTTGAAGAGAAGTTGA+AGG | + | chr4.1:28223487-28223506 | MS.gene003381:CDS | 40.0% | |
| TGCAGAGAAAAAAGGACTTG+GGG | + | chr4.1:28221160-28221179 | MS.gene003381:CDS | 40.0% | |
| TGCTGAGTCAGAAAACCTAT+TGG | + | chr4.1:28222156-28222175 | MS.gene003381:CDS | 40.0% | |
| ! | ATTGCAGAAGCATACTGAGA+AGG | + | chr4.1:28222849-28222868 | MS.gene003381:CDS | 40.0% |
| ! | CAACTCACTCACTCTCTTTT+CGG | - | chr4.1:28221852-28221871 | None:intergenic | 40.0% |
| ! | CCGTTTGCAGTGTATTTTCA+AGG | - | chr4.1:28222039-28222058 | None:intergenic | 40.0% |
| ! | CTGAGAGTTTTCATGTTCAG+AGG | - | chr4.1:28220307-28220326 | None:intergenic | 40.0% |
| ! | CTGAGCTTCTTTCAGTTTTG+TGG | - | chr4.1:28220197-28220216 | None:intergenic | 40.0% |
| ! | CTGATTTGATATGAGAGCTC+TGG | - | chr4.1:28221823-28221842 | None:intergenic | 40.0% |
| ! | GAAAAGCATGGAAGATGAGA+TGG | + | chr4.1:28220719-28220738 | MS.gene003381:CDS | 40.0% |
| ! | TTCTTGCTCTTCCTTTTCGA+TGG | - | chr4.1:28224429-28224448 | None:intergenic | 40.0% |
| !! | CAGTGTATTTTCAAGGCTTG+AGG | - | chr4.1:28222032-28222051 | None:intergenic | 40.0% |
| !! | CTGTTCAAGCTCTGAATTGT+TGG | - | chr4.1:28221312-28221331 | None:intergenic | 40.0% |
| !! | GATGAAGAAGTTGATGCTGA+AGG | - | chr4.1:28224471-28224490 | None:intergenic | 40.0% |
| AAAGAATGCTGCCGAAGACT+TGG | + | chr4.1:28223206-28223225 | MS.gene003381:CDS | 45.0% | |
| AAAGGTCAAGCTGCAAATGG+AGG | + | chr4.1:28221052-28221071 | MS.gene003381:CDS | 45.0% | |
| ACCAGTCGAGCAGCATTTAT+AGG | + | chr4.1:28219751-28219770 | MS.gene003381:intron | 45.0% | |
| ACCTTTGTCACTGGAACTTC+TGG | - | chr4.1:28219498-28219517 | None:intergenic | 45.0% | |
| AGAAAAGGTTCAGGAACTCG+AGG | + | chr4.1:28220248-28220267 | MS.gene003381:CDS | 45.0% | |
| AGATGAGATGGCTTCTCTGA+AGG | + | chr4.1:28220731-28220750 | MS.gene003381:CDS | 45.0% | |
| AGCTTCTTGGAGCTTCTGTT+CGG | - | chr4.1:28222389-28222408 | None:intergenic | 45.0% | |
| AGGAGCAGAATCTCAGAAGT+TGG | + | chr4.1:28224077-28224096 | MS.gene003381:CDS | 45.0% | |
| AGTGACAAAGGTTGTCGAAG+AGG | + | chr4.1:28219506-28219525 | MS.gene003381:CDS | 45.0% | |
| AGTGCAGACATTGAAGTCAC+AGG | + | chr4.1:28223248-28223267 | MS.gene003381:CDS | 45.0% | |
| ATTGGCAGAATGAGTTTCGG+AGG | - | chr4.1:28222788-28222807 | None:intergenic | 45.0% | |
| CGAAAAGAGAGTGAGTGAGT+TGG | + | chr4.1:28221850-28221869 | MS.gene003381:CDS | 45.0% | |
| CGAGAAGGAAGAGAATGTGT+TGG | + | chr4.1:28220161-28220180 | MS.gene003381:CDS | 45.0% | |
| CGCTAAATTGAAAGAGGCTG+AGG | + | chr4.1:28221601-28221620 | MS.gene003381:CDS | 45.0% | |
| GAAAGAGCTTCTTCAGGTGA+AGG | + | chr4.1:28220500-28220519 | MS.gene003381:CDS | 45.0% | |
| GAACAGTGTTCTGTCAGAGA+AGG | + | chr4.1:28222693-28222712 | MS.gene003381:CDS | 45.0% | |
| GACCTTTGCACTTTCCAACT+CGG | - | chr4.1:28221039-28221058 | None:intergenic | 45.0% | |
| GAGGAAGATAATGCCTCAGA+TGG | + | chr4.1:28220123-28220142 | MS.gene003381:CDS | 45.0% | |
| GCATCTCATCTCCATCGAAA+AGG | + | chr4.1:28224415-28224434 | MS.gene003381:CDS | 45.0% | |
| GCATCTTGAAGCAGTAGTTG+AGG | + | chr4.1:28223011-28223030 | MS.gene003381:CDS | 45.0% | |
| GCTCCTTCAACTTCTCTTCA+AGG | - | chr4.1:28223493-28223512 | None:intergenic | 45.0% | |
| GCTGCAACTTTCTACAGAAG+AGG | + | chr4.1:28220590-28220609 | MS.gene003381:CDS | 45.0% | |
| GCTTGAAACACGCTTCATAG+CGG | + | chr4.1:28221469-28221488 | MS.gene003381:CDS | 45.0% | |
| GGTGAGTTTATGGACACTGA+AGG | - | chr4.1:28219734-28219753 | None:intergenic | 45.0% | |
| GGTTCACATGCTGAATCTGA+GGG | + | chr4.1:28220645-28220664 | MS.gene003381:CDS | 45.0% | |
| TACAAATGCAGCTGCAGAAG+AGG | + | chr4.1:28221427-28221446 | MS.gene003381:CDS | 45.0% | |
| TATCCATGTGCTCCTGCAAT+AGG | - | chr4.1:28221649-28221668 | None:intergenic | 45.0% | |
| TCCAGAAGTTCCAGTGACAA+AGG | + | chr4.1:28219494-28219513 | MS.gene003381:CDS | 45.0% | |
| TCCGAGACTCATATTCAAGC+CGG | + | chr4.1:28224489-28224508 | MS.gene003381:CDS | 45.0% | |
| TCCTATAAATGCTGCTCGAC+TGG | - | chr4.1:28219755-28219774 | None:intergenic | 45.0% | |
| TCGATACAAGAGCTACTCCA+AGG | - | chr4.1:28224548-28224567 | None:intergenic | 45.0% | |
| TCTAATGATGTTGCAGGGTG+AGG | + | chr4.1:28224344-28224363 | MS.gene003381:intron | 45.0% | |
| TCTTCGACAACCTTTGTCAC+TGG | - | chr4.1:28219507-28219526 | None:intergenic | 45.0% | |
| TGAAACTCGTAAAGCTGAGC+TGG | + | chr4.1:28222966-28222985 | MS.gene003381:CDS | 45.0% | |
| TGAATCTGAGGGAAACAAGG+CGG | + | chr4.1:28220656-28220675 | MS.gene003381:CDS | 45.0% | |
| TGCAAAGGTCAAGCTGCAAA+TGG | + | chr4.1:28221049-28221068 | MS.gene003381:CDS | 45.0% | |
| TGCTGAATCTGAGGGAAACA+AGG | + | chr4.1:28220653-28220672 | MS.gene003381:CDS | 45.0% | |
| TGGTTCACATGCTGAATCTG+AGG | + | chr4.1:28220644-28220663 | MS.gene003381:CDS | 45.0% | |
| TTCAAGGATGCGAGCTTCAT+TGG | - | chr4.1:28222806-28222825 | None:intergenic | 45.0% | |
| ! | TCTAGTAGACAAGTTGACCG+AGG | + | chr4.1:28220911-28220930 | MS.gene003381:CDS | 45.0% |
| ! | TGTCACTGGAACTTCTGGAA+TGG | - | chr4.1:28219493-28219512 | None:intergenic | 45.0% |
| ! | TTCCGAGTTGGAAAGTGCAA+AGG | + | chr4.1:28221034-28221053 | MS.gene003381:CDS | 45.0% |
| !! | AAATGCAGACTTGCTGCCTA+AGG | + | chr4.1:28220077-28220096 | MS.gene003381:CDS | 45.0% |
| AAGCTCCCGAAAGAAGATGC+AGG | + | chr4.1:28220554-28220573 | MS.gene003381:CDS | 50.0% | |
| AATGATGTTGCAGGGTGAGG+AGG | + | chr4.1:28224347-28224366 | MS.gene003381:intron | 50.0% | |
| AGCGGCAGAGCAAAAGAATG+TGG | + | chr4.1:28221487-28221506 | MS.gene003381:CDS | 50.0% | |
| AGGAAAATATCGCAGGAGCC+GGG | + | chr4.1:28222473-28222492 | MS.gene003381:CDS | 50.0% | |
| ATGATGTTGCAGGGTGAGGA+GGG | + | chr4.1:28224348-28224367 | MS.gene003381:intron | 50.0% | |
| CACGTCTCTCTCAGCATCAT+TGG | - | chr4.1:28221549-28221568 | None:intergenic | 50.0% | |
| CATGATAGGCGAATCATGGC+CGG | - | chr4.1:28224511-28224530 | None:intergenic | 50.0% | |
| CTGCTCGACTGGTGAGTTTA+TGG | - | chr4.1:28219744-28219763 | None:intergenic | 50.0% | |
| GACAAAGGTTGTCGAAGAGG+TGG | + | chr4.1:28219509-28219528 | MS.gene003381:CDS | 50.0% | |
| GAGCGTGAAACAGAAACTGC+TGG | + | chr4.1:28223054-28223073 | MS.gene003381:CDS | 50.0% | |
| GAGGAAAATATCGCAGGAGC+CGG | + | chr4.1:28222472-28222491 | MS.gene003381:CDS | 50.0% | |
| GAGGAGCTGCATAAGCAAAG+TGG | + | chr4.1:28220624-28220643 | MS.gene003381:CDS | 50.0% | |
| GTGTTTCCGAAGTCTTTCGC+AGG | - | chr4.1:28220944-28220963 | None:intergenic | 50.0% | |
| TGCATTGCAAAGTAGGCTGC+AGG | + | chr4.1:28223580-28223599 | MS.gene003381:CDS | 50.0% | |
| TTGACTAGCAGTGGCTGCAA+CGG | - | chr4.1:28221375-28221394 | None:intergenic | 50.0% | |
| ! | TAGCCTATTGCAGGAGCACA+TGG | + | chr4.1:28221643-28221662 | MS.gene003381:CDS | 50.0% |
| ! | TGCTGAAGGAGTTGTCGCTT+CGG | - | chr4.1:28224457-28224476 | None:intergenic | 50.0% |
| !! | CTTCAGGTGAAGGAAGCGTT+TGG | + | chr4.1:28220510-28220529 | MS.gene003381:CDS | 50.0% |
| !! | GCCGGCTTGAATATGAGTCT+CGG | - | chr4.1:28224493-28224512 | None:intergenic | 50.0% |
| AACGCGTTCACGCACATACC+TGG | - | chr4.1:28223935-28223954 | None:intergenic | 55.0% | |
| CTCTGCTGCACTTGTCGAGA+AGG | + | chr4.1:28223155-28223174 | MS.gene003381:CDS | 55.0% | |
| GCAGCTCAGCACTCTTGAAG+AGG | + | chr4.1:28220452-28220471 | MS.gene003381:CDS | 55.0% | |
| GCTGCGCTCATTGTTCATGG+TGG | - | chr4.1:28221780-28221799 | None:intergenic | 55.0% | |
| GGAAAATATCGCAGGAGCCG+GGG | + | chr4.1:28222474-28222493 | MS.gene003381:CDS | 55.0% | |
| GGTGGCTCGATCTTCATGCT+CGG | - | chr4.1:28221762-28221781 | None:intergenic | 55.0% | |
| TCGGCTGCGCTCATTGTTCA+TGG | - | chr4.1:28221783-28221802 | None:intergenic | 55.0% | |
| ! | AGAAGAGGCACGGAAGTTCG+AGG | + | chr4.1:28220605-28220624 | MS.gene003381:CDS | 55.0% |
| AGCAGTGGCTGCAACGGTTC+CGG | - | chr4.1:28221369-28221388 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 28219471 | 28224602 | 28219471 | ID=MS.gene003381 |
| chr4.1 | mRNA | 28219471 | 28224602 | 28219471 | ID=MS.gene003381.t1;Parent=MS.gene003381 |
| chr4.1 | exon | 28219471 | 28219554 | 28219471 | ID=MS.gene003381.t1.exon1;Parent=MS.gene003381.t1 |
| chr4.1 | CDS | 28219471 | 28219554 | 28219471 | ID=cds.MS.gene003381.t1;Parent=MS.gene003381.t1 |
| chr4.1 | exon | 28220072 | 28223269 | 28220072 | ID=MS.gene003381.t1.exon2;Parent=MS.gene003381.t1 |
| chr4.1 | CDS | 28220072 | 28223269 | 28220072 | ID=cds.MS.gene003381.t1;Parent=MS.gene003381.t1 |
| chr4.1 | exon | 28223407 | 28223649 | 28223407 | ID=MS.gene003381.t1.exon3;Parent=MS.gene003381.t1 |
| chr4.1 | CDS | 28223407 | 28223649 | 28223407 | ID=cds.MS.gene003381.t1;Parent=MS.gene003381.t1 |
| chr4.1 | exon | 28223777 | 28223935 | 28223777 | ID=MS.gene003381.t1.exon4;Parent=MS.gene003381.t1 |
| chr4.1 | CDS | 28223777 | 28223935 | 28223777 | ID=cds.MS.gene003381.t1;Parent=MS.gene003381.t1 |
| chr4.1 | exon | 28224075 | 28224230 | 28224075 | ID=MS.gene003381.t1.exon5;Parent=MS.gene003381.t1 |
| chr4.1 | CDS | 28224075 | 28224230 | 28224075 | ID=cds.MS.gene003381.t1;Parent=MS.gene003381.t1 |
| chr4.1 | exon | 28224360 | 28224602 | 28224360 | ID=MS.gene003381.t1.exon6;Parent=MS.gene003381.t1 |
| chr4.1 | CDS | 28224360 | 28224602 | 28224360 | ID=cds.MS.gene003381.t1;Parent=MS.gene003381.t1 |
| Gene Sequence |
| Protein sequence |
