Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005379.t1 | XP_024638902.1 | 97.8 | 416 | 9 | 0 | 1 | 416 | 1 | 416 | 3.70E-247 | 863.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005379.t1 | Q9SFF6 | 69.1 | 418 | 124 | 4 | 1 | 416 | 1 | 415 | 3.3e-175 | 615.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005379.t1 | A0A396JTP5 | 97.8 | 416 | 9 | 0 | 1 | 416 | 1 | 416 | 2.7e-247 | 863.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005379 | MS.gene34153 | PPI |
| MS.gene005379 | MS.gene34152 | PPI |
| MS.gene005379 | MS.gene006279 | PPI |
| MS.gene005379 | MS.gene21119 | PPI |
| MS.gene005379 | MS.gene072631 | PPI |
| MS.gene20926 | MS.gene005379 | PPI |
| MS.gene005408 | MS.gene005379 | PPI |
| MS.gene005379 | MS.gene061170 | PPI |
| MS.gene005379 | MS.gene050825 | PPI |
| MS.gene005379 | MS.gene21120 | PPI |
| MS.gene005379 | MS.gene061169 | PPI |
| MS.gene005379 | MS.gene07380 | PPI |
| MS.gene005379 | MS.gene49105 | PPI |
| MS.gene005379 | MS.gene49106 | PPI |
| MS.gene005379 | MS.gene071630 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005379.t1 | MTR_1g085070 | 93.765 | 417 | 10 | 2 | 1 | 416 | 1 | 402 | 0.0 | 808 |
| MS.gene005379.t1 | MTR_7g111280 | 74.641 | 418 | 103 | 2 | 1 | 415 | 1 | 418 | 0.0 | 665 |
| MS.gene005379.t1 | MTR_7g110900 | 71.658 | 374 | 106 | 0 | 42 | 415 | 41 | 414 | 0.0 | 598 |
| MS.gene005379.t1 | MTR_7g110900 | 71.467 | 375 | 107 | 0 | 42 | 416 | 41 | 415 | 0.0 | 597 |
| MS.gene005379.t1 | MTR_4g124320 | 74.387 | 367 | 94 | 0 | 49 | 415 | 54 | 420 | 0.0 | 586 |
| MS.gene005379.t1 | MTR_1g085620 | 69.600 | 375 | 114 | 0 | 42 | 416 | 29 | 403 | 0.0 | 585 |
| MS.gene005379.t1 | MTR_1g085620 | 69.799 | 298 | 90 | 0 | 119 | 416 | 1 | 298 | 5.66e-166 | 468 |
| MS.gene005379.t1 | MTR_8g072010 | 52.815 | 373 | 174 | 1 | 46 | 416 | 20 | 392 | 2.68e-157 | 450 |
| MS.gene005379.t1 | MTR_8g072000 | 49.286 | 420 | 199 | 3 | 1 | 416 | 15 | 424 | 4.28e-157 | 450 |
| MS.gene005379.t1 | MTR_8g072000 | 53.369 | 371 | 171 | 1 | 48 | 416 | 23 | 393 | 1.13e-155 | 445 |
| MS.gene005379.t1 | MTR_5g042650 | 51.762 | 369 | 172 | 2 | 48 | 414 | 24 | 388 | 3.32e-147 | 424 |
| MS.gene005379.t1 | MTR_1g101000 | 53.951 | 367 | 164 | 3 | 53 | 414 | 39 | 405 | 4.88e-145 | 419 |
| MS.gene005379.t1 | MTR_1g101000 | 53.951 | 367 | 164 | 3 | 53 | 414 | 39 | 405 | 1.12e-144 | 419 |
| MS.gene005379.t1 | MTR_4g124320 | 75.397 | 252 | 62 | 0 | 49 | 300 | 54 | 305 | 1.98e-144 | 414 |
| MS.gene005379.t1 | MTR_1g101020 | 53.951 | 367 | 164 | 3 | 53 | 414 | 39 | 405 | 1.96e-143 | 415 |
| MS.gene005379.t1 | MTR_7g060760 | 50.546 | 366 | 175 | 2 | 52 | 415 | 56 | 417 | 5.09e-140 | 406 |
| MS.gene005379.t1 | MTR_1g101000 | 52.853 | 333 | 152 | 3 | 53 | 380 | 39 | 371 | 5.55e-126 | 369 |
| MS.gene005379.t1 | MTR_1g036590 | 64.634 | 82 | 29 | 0 | 233 | 314 | 270 | 351 | 1.75e-29 | 119 |
| MS.gene005379.t1 | MTR_7g006750 | 52.128 | 94 | 45 | 0 | 192 | 285 | 467 | 560 | 3.19e-26 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005379.t1 | AT3G05910 | 69.139 | 418 | 124 | 4 | 1 | 416 | 1 | 415 | 0.0 | 613 |
| MS.gene005379.t1 | AT5G26670 | 68.974 | 419 | 124 | 4 | 1 | 416 | 1 | 416 | 0.0 | 603 |
| MS.gene005379.t1 | AT1G57590 | 72.900 | 369 | 100 | 0 | 48 | 416 | 75 | 443 | 0.0 | 588 |
| MS.gene005379.t1 | AT3G62060 | 64.634 | 410 | 138 | 2 | 7 | 415 | 15 | 418 | 0.0 | 578 |
| MS.gene005379.t1 | AT3G62060 | 64.477 | 411 | 139 | 2 | 7 | 416 | 15 | 419 | 0.0 | 577 |
| MS.gene005379.t1 | AT2G46930 | 62.954 | 413 | 146 | 2 | 4 | 416 | 11 | 416 | 0.0 | 570 |
| MS.gene005379.t1 | AT5G26670 | 73.826 | 298 | 78 | 0 | 119 | 416 | 1 | 298 | 2.77e-170 | 479 |
| MS.gene005379.t1 | AT5G26670 | 73.826 | 298 | 78 | 0 | 119 | 416 | 1 | 298 | 2.77e-170 | 479 |
| MS.gene005379.t1 | AT5G26670 | 73.826 | 298 | 78 | 0 | 119 | 416 | 1 | 298 | 2.77e-170 | 479 |
| MS.gene005379.t1 | AT4G19420 | 58.082 | 365 | 151 | 1 | 53 | 415 | 25 | 389 | 6.22e-163 | 464 |
| MS.gene005379.t1 | AT4G19420 | 58.082 | 365 | 151 | 1 | 53 | 415 | 25 | 389 | 6.22e-163 | 464 |
| MS.gene005379.t1 | AT1G09550 | 60.058 | 343 | 136 | 1 | 52 | 394 | 41 | 382 | 1.12e-158 | 452 |
| MS.gene005379.t1 | AT4G19420 | 53.000 | 400 | 151 | 2 | 53 | 415 | 25 | 424 | 4.90e-156 | 447 |
| MS.gene005379.t1 | AT5G23870 | 54.348 | 368 | 162 | 4 | 53 | 414 | 35 | 402 | 2.28e-150 | 432 |
| MS.gene005379.t1 | AT5G23870 | 54.348 | 368 | 162 | 4 | 53 | 414 | 35 | 402 | 2.28e-150 | 432 |
| MS.gene005379.t1 | AT5G23870 | 54.348 | 368 | 162 | 4 | 53 | 414 | 35 | 402 | 4.76e-150 | 432 |
| MS.gene005379.t1 | AT5G23870 | 54.348 | 368 | 162 | 4 | 53 | 414 | 35 | 402 | 5.39e-150 | 433 |
| MS.gene005379.t1 | AT3G05910 | 65.696 | 309 | 101 | 4 | 1 | 307 | 1 | 306 | 4.57e-147 | 420 |
| MS.gene005379.t1 | AT4G19410 | 51.359 | 368 | 176 | 2 | 46 | 410 | 17 | 384 | 2.12e-145 | 419 |
| MS.gene005379.t1 | AT3G09410 | 49.866 | 373 | 184 | 1 | 46 | 415 | 54 | 426 | 7.62e-143 | 414 |
| MS.gene005379.t1 | AT5G45280 | 49.457 | 368 | 183 | 2 | 46 | 410 | 17 | 384 | 9.39e-143 | 412 |
| MS.gene005379.t1 | AT4G19410 | 50.847 | 354 | 172 | 1 | 46 | 397 | 17 | 370 | 1.70e-137 | 404 |
| MS.gene005379.t1 | AT3G09405 | 49.319 | 367 | 181 | 2 | 47 | 410 | 45 | 409 | 1.48e-134 | 392 |
| MS.gene005379.t1 | AT3G09410 | 48.824 | 340 | 171 | 1 | 46 | 382 | 54 | 393 | 4.71e-125 | 367 |
| MS.gene005379.t1 | AT5G45280 | 52.055 | 292 | 138 | 1 | 43 | 332 | 14 | 305 | 3.56e-116 | 344 |
| MS.gene005379.t1 | AT3G09405 | 49.835 | 303 | 147 | 2 | 111 | 410 | 2 | 302 | 5.77e-111 | 328 |
| MS.gene005379.t1 | AT4G19420 | 58.403 | 238 | 94 | 2 | 53 | 288 | 25 | 259 | 4.34e-96 | 290 |
Find 95 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCTTCAGGCTCTTCTTTC+TGG | -0.013953 | 1.1:-63047793 | MS.gene005379:intron |
| TCAACCCACCTTGCAGAAAT+TGG | 0.177359 | 1.1:+63046800 | None:intergenic |
| TTGCTTAATATTCCAGTAAA+AGG | 0.252750 | 1.1:+63048462 | None:intergenic |
| GTGAACCAGAACATTTATTA+TGG | 0.270304 | 1.1:+63046827 | None:intergenic |
| CAGCTGGCTTGTTAATTTAG+AGG | 0.278550 | 1.1:-63048853 | MS.gene005379:intron |
| CTTCTTTCTGGATGCTCAGC+TGG | 0.328684 | 1.1:-63047781 | MS.gene005379:CDS |
| CACTTCACTTTGGTAGTCCT+TGG | 0.337219 | 1.1:+63047712 | None:intergenic |
| TTAAACCATAATAAATGTTC+TGG | 0.344297 | 1.1:-63046832 | MS.gene005379:CDS |
| AAATTCATCGCAGTGTAAAA+TGG | 0.352117 | 1.1:+63047747 | None:intergenic |
| TTCTCAAGATCAGGTCAAAA+TGG | 0.355306 | 1.1:-63046649 | MS.gene005379:CDS |
| CGGCCGATCCCCACGGCAAT+TGG | 0.361858 | 1.1:-63046867 | MS.gene005379:CDS |
| TAAAATCTGATACAGGATTC+AGG | 0.362095 | 1.1:-63046699 | MS.gene005379:intron |
| AATTCAGAGGACAACGCATT+TGG | 0.411794 | 1.1:-63047940 | MS.gene005379:CDS |
| ATTTACCTGCCACGAGTCAT+AGG | 0.414535 | 1.1:+63047031 | None:intergenic |
| ACGTGGATCATCAAAATTCA+TGG | 0.426749 | 1.1:-63048496 | MS.gene005379:CDS |
| AGCAGCAGCAGATTGAATAA+TGG | 0.436257 | 1.1:+63049381 | None:intergenic |
| TGATAGCACATGCCACCATT+TGG | 0.437780 | 1.1:-63046074 | MS.gene005379:CDS |
| GCTGACAACTCTCCTGTCAT+AGG | 0.444782 | 1.1:-63046568 | MS.gene005379:CDS |
| ATTCAATCTGCTGCTGCTAA+AGG | 0.458885 | 1.1:-63049376 | MS.gene005379:CDS |
| ACTTCACTTTGGTAGTCCTT+GGG | 0.459019 | 1.1:+63047713 | None:intergenic |
| TACCTTATCTTCACTATCCC+CGG | 0.462721 | 1.1:+63048264 | None:intergenic |
| ACGCCAATTGCCGTGGGGAT+CGG | 0.463148 | 1.1:+63046864 | None:intergenic |
| TGCGATAGACGCAAGTTCTA+CGG | 0.464930 | 1.1:+63048529 | None:intergenic |
| ATGAAGGAGCTAAGCTTGAC+TGG | 0.465960 | 1.1:+63046890 | None:intergenic |
| TTGCTCTGGCTGTTGGAGAC+TGG | 0.473165 | 1.1:-63046144 | MS.gene005379:CDS |
| CAACGGTGTTGTCACCCTAC+AGG | 0.473602 | 1.1:-63047511 | MS.gene005379:intron |
| GTGAGAGGCTTCTCAAGATC+AGG | 0.473932 | 1.1:-63046658 | MS.gene005379:CDS |
| ATACTAGCAATCAAGTTCTC+AGG | 0.479100 | 1.1:+63047083 | None:intergenic |
| ATGGATCCGGTGCAAACAGC+TGG | 0.480647 | 1.1:-63048869 | MS.gene005379:CDS |
| ACGCATTTGGTTGGCTGCAG+TGG | 0.483484 | 1.1:-63047927 | MS.gene005379:CDS |
| ATCACTAAGGCACTTCACTT+TGG | 0.485245 | 1.1:+63047702 | None:intergenic |
| GTGAAGTGCCTTAGTGATGC+TGG | 0.487536 | 1.1:-63047697 | MS.gene005379:CDS |
| TAGCTGGTGGGCATACCCTC+AGG | 0.487893 | 1.1:-63047542 | MS.gene005379:CDS |
| GTGGAGGATTTGATGTCAAA+AGG | 0.488280 | 1.1:-63047908 | MS.gene005379:CDS |
| CTCACCTTGTTTCCTATGAC+AGG | 0.490925 | 1.1:+63046556 | None:intergenic |
| CCGTGGGGATCGGCCGATGA+AGG | 0.493491 | 1.1:+63046874 | None:intergenic |
| TACCGGGGATAGTGAAGATA+AGG | 0.496636 | 1.1:-63048266 | MS.gene005379:intron |
| CAGAGGACAACGCATTTGGT+TGG | 0.504022 | 1.1:-63047936 | MS.gene005379:CDS |
| TAGGCAATTGCTCTGGCTGT+TGG | 0.506232 | 1.1:-63046151 | MS.gene005379:CDS |
| TTCACTATCCCCGGTAAAAG+AGG | 0.509811 | 1.1:+63048273 | None:intergenic |
| CAGTATTAAGAATGAATAGC+GGG | 0.512415 | 1.1:+63047054 | None:intergenic |
| ACTTGTGGCTCAGCCTCACA+TGG | 0.512424 | 1.1:-63049413 | MS.gene005379:CDS |
| ATGTGTCTTGCCTCTCAGAT+TGG | 0.519666 | 1.1:+63046596 | None:intergenic |
| CATTTGGTTGGCTGCAGTGG+AGG | 0.521238 | 1.1:-63047924 | MS.gene005379:CDS |
| GAAATAACCCAGCATCACTA+AGG | 0.526893 | 1.1:+63047689 | None:intergenic |
| TTACACTGCGATGAATTTCG+AGG | 0.529690 | 1.1:-63047742 | MS.gene005379:CDS |
| CCGCGATCAAAATGATAAGC+AGG | 0.529880 | 1.1:+63048894 | None:intergenic |
| TTACAATGCAAACCCAGAAA+AGG | 0.531063 | 1.1:+63049539 | None:intergenic |
| CTTTCTGGATGCTCAGCTGG+TGG | 0.531189 | 1.1:-63047778 | MS.gene005379:CDS |
| TGCAATCACGCCAATTGCCG+TGG | 0.532481 | 1.1:+63046857 | None:intergenic |
| TTTGATCGCGGATATGGATC+CGG | 0.539137 | 1.1:-63048882 | MS.gene005379:CDS |
| AACAAGCCAGCTGTTTGCAC+CGG | 0.541065 | 1.1:+63048863 | None:intergenic |
| TACTGCCTATGACTCGTGGC+AGG | 0.541796 | 1.1:-63047036 | MS.gene005379:intron |
| TCGCTCATCTGAAAACCAAA+TGG | 0.544159 | 1.1:+63046059 | None:intergenic |
| CTCTCCTGTCATAGGAAACA+AGG | 0.552688 | 1.1:-63046560 | MS.gene005379:intron |
| TGCATTTGCATCAACCCAGT+TGG | 0.557817 | 1.1:+63049501 | None:intergenic |
| TCTGCTGCTGCTAAAGGAGC+TGG | 0.564131 | 1.1:-63049370 | MS.gene005379:intron |
| AATTTCGAGGTCGTTTCCCA+AGG | 0.570004 | 1.1:-63047729 | MS.gene005379:CDS |
| GCAATCACGCCAATTGCCGT+GGG | 0.571050 | 1.1:+63046858 | None:intergenic |
| GTGGCTCAGCCTCACATGGT+TGG | 0.572897 | 1.1:-63049409 | MS.gene005379:CDS |
| ATATCAATTATTACCGAAGT+GGG | 0.578018 | 1.1:+63047238 | None:intergenic |
| AATAACGCTCAAGAGAATCC+AGG | 0.580062 | 1.1:-63048441 | MS.gene005379:intron |
| CAATATGTAGGCAATTGCTC+TGG | 0.584344 | 1.1:-63046158 | MS.gene005379:intron |
| GAATATAGTGTTGATGTAGC+TGG | 0.584790 | 1.1:-63047558 | MS.gene005379:intron |
| GAAATACTGTGGCAGGGAGG+TGG | 0.587258 | 1.1:-63048564 | MS.gene005379:intron |
| GATATCAATTATTACCGAAG+TGG | 0.589141 | 1.1:+63047237 | None:intergenic |
| CATGTGCTATCACAAGGGTA+AGG | 0.597112 | 1.1:+63046085 | None:intergenic |
| CCTTCATCGGCCGATCCCCA+CGG | 0.597346 | 1.1:-63046874 | MS.gene005379:CDS |
| GTGAAAATTCGTTACTGTGA+TGG | 0.602298 | 1.1:-63048298 | MS.gene005379:CDS |
| CAATGTCCTTAACAGCGGCT+CGG | 0.605068 | 1.1:+63046113 | None:intergenic |
| TACTGTGGCAGGGAGGTGGT+TGG | 0.606796 | 1.1:-63048560 | MS.gene005379:intron |
| TGGTGGCATGTGCTATCACA+AGG | 0.607600 | 1.1:+63046079 | None:intergenic |
| AATCTGAGAGGCAAGACACA+TGG | 0.627362 | 1.1:-63046594 | MS.gene005379:CDS |
| TAATCATCTTGATCCCACTT+CGG | 0.628050 | 1.1:-63047251 | MS.gene005379:intron |
| GTCAAGCTTAGCTCCTTCAT+CGG | 0.630234 | 1.1:-63046887 | MS.gene005379:CDS |
| TCACAAATCCAATTTCTGCA+AGG | 0.632203 | 1.1:-63046808 | MS.gene005379:intron |
| TATCGCAAGACCACACGACG+TGG | 0.635251 | 1.1:-63048513 | MS.gene005379:CDS |
| TGAAGTGCCTTAGTGATGCT+GGG | 0.640149 | 1.1:-63047696 | MS.gene005379:CDS |
| TTAATACTGCCTATGACTCG+TGG | 0.644352 | 1.1:-63047040 | MS.gene005379:CDS |
| TTGCTCACTGCCAATCTGAG+AGG | 0.650325 | 1.1:-63046606 | MS.gene005379:CDS |
| CTCATCTGAAAACCAAATGG+TGG | 0.650600 | 1.1:+63046062 | None:intergenic |
| GCTGCACAGTTGCAATTCAG+AGG | 0.651430 | 1.1:-63047953 | MS.gene005379:CDS |
| AGATGATTAGTACAAACGCG+TGG | 0.666672 | 1.1:+63047265 | None:intergenic |
| TACAGGATTCAGGAATCACA+TGG | 0.672670 | 1.1:-63046689 | MS.gene005379:intron |
| GCAGTATTAAGAATGAATAG+CGG | 0.673265 | 1.1:+63047053 | None:intergenic |
| GTGTATGTGTACAACCTGCT+TGG | 0.677541 | 1.1:+63047874 | None:intergenic |
| CACATGGTGAATGTTGTGAG+AGG | 0.686276 | 1.1:-63046673 | MS.gene005379:CDS |
| ACAATCAATGTCCTTAACAG+CGG | 0.695254 | 1.1:+63046108 | None:intergenic |
| ATGGTGATTCCAACCATGTG+AGG | 0.696950 | 1.1:+63049400 | None:intergenic |
| AACCCAGAAAAGGTTCACCA+TGG | 0.700911 | 1.1:+63049549 | None:intergenic |
| CAATCACGCCAATTGCCGTG+GGG | 0.703508 | 1.1:+63046859 | None:intergenic |
| TATAGTGTTGATGTAGCTGG+TGG | 0.704921 | 1.1:-63047555 | MS.gene005379:intron |
| AGTATTAAGAATGAATAGCG+GGG | 0.730636 | 1.1:+63047055 | None:intergenic |
| ATAGTGTTGATGTAGCTGGT+GGG | 0.736999 | 1.1:-63047554 | MS.gene005379:intron |
| GGTGGCATGTGCTATCACAA+GGG | 0.739938 | 1.1:+63046080 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAACTTAATGAATAAAAT+TGG | + | chr1.1:63047395-63047414 | None:intergenic | 10.0% |
| !! | ATCATATAATATGATTTATT+CGG | + | chr1.1:63048634-63048653 | None:intergenic | 10.0% |
| !! | ATTTATTTGTTTATTTATTC+AGG | + | chr1.1:63049156-63049175 | None:intergenic | 10.0% |
| !!! | AACAATTAGGAATTAATTTT+AGG | + | chr1.1:63048024-63048043 | None:intergenic | 15.0% |
| !!! | ATACTCAATTAATTTGTTTT+TGG | - | chr1.1:63046670-63046689 | MS.gene005379:CDS | 15.0% |
| !!! | TAAATATCTTATTTCTAACT+CGG | - | chr1.1:63048597-63048616 | MS.gene005379:intron | 15.0% |
| !!! | TTATTCATTAAGTTTTTCAT+AGG | - | chr1.1:63047398-63047417 | MS.gene005379:intron | 15.0% |
| !! | AAATCATATTATATGATCTG+TGG | - | chr1.1:63048637-63048656 | MS.gene005379:intron | 20.0% |
| !! | AAATCATGTGATAATAATGA+TGG | + | chr1.1:63047996-63048015 | None:intergenic | 20.0% |
| !! | ATATATAACATGGCAAATTA+GGG | + | chr1.1:63046530-63046549 | None:intergenic | 20.0% |
| !! | ATTTAACTAAAATCTGATAC+AGG | - | chr1.1:63048904-63048923 | MS.gene005379:CDS | 20.0% |
| !! | CTATGTAATAATGTAATGTA+GGG | - | chr1.1:63047591-63047610 | MS.gene005379:intron | 20.0% |
| !! | GAATTATCATGCTTTATATA+AGG | + | chr1.1:63048278-63048297 | None:intergenic | 20.0% |
| !! | TAAAAAAATCTGCAATCATA+CGG | + | chr1.1:63047281-63047300 | None:intergenic | 20.0% |
| !! | TCAATATGTTCATATTGTAA+AGG | - | chr1.1:63046843-63046862 | MS.gene005379:CDS | 20.0% |
| !! | TCTATGTAATAATGTAATGT+AGG | - | chr1.1:63047590-63047609 | MS.gene005379:intron | 20.0% |
| !! | TGCATAACATTGTTATATTA+TGG | + | chr1.1:63049279-63049298 | None:intergenic | 20.0% |
| !! | TTAAACCATAATAAATGTTC+TGG | - | chr1.1:63048778-63048797 | MS.gene005379:intron | 20.0% |
| !!! | AATTTATATGGTTTGAAACT+TGG | - | chr1.1:63048231-63048250 | MS.gene005379:intron | 20.0% |
| !!! | ATTTTAACTAAAACTGCATA+GGG | + | chr1.1:63049090-63049109 | None:intergenic | 20.0% |
| !!! | GCATTTTTTTATAACAAAGA+AGG | + | chr1.1:63046282-63046301 | None:intergenic | 20.0% |
| !!! | TATTTTAACTAAAACTGCAT+AGG | + | chr1.1:63049091-63049110 | None:intergenic | 20.0% |
| !!! | TTGAGTTAAAGATTTCTTTT+TGG | + | chr1.1:63046610-63046629 | None:intergenic | 20.0% |
| ! | ATAACAAAGAAGGTTAGAAA+TGG | + | chr1.1:63046272-63046291 | None:intergenic | 25.0% |
| ! | ATATCAATTATTACCGAAGT+GGG | + | chr1.1:63048375-63048394 | None:intergenic | 25.0% |
| ! | CAATTATTGTCAATGCATAA+GGG | + | chr1.1:63049431-63049450 | None:intergenic | 25.0% |
| ! | CACATGCTAAACAATTTATA+TGG | - | chr1.1:63048219-63048238 | MS.gene005379:intron | 25.0% |
| ! | CATATAAATTGTTTAGCATG+TGG | + | chr1.1:63048221-63048240 | None:intergenic | 25.0% |
| ! | CATATATAACATGGCAAATT+AGG | + | chr1.1:63046531-63046550 | None:intergenic | 25.0% |
| ! | GACAATAATTGACAATATGT+AGG | - | chr1.1:63049440-63049459 | MS.gene005379:CDS | 25.0% |
| ! | GATATTTAAGTGAAATACTG+TGG | - | chr1.1:63047035-63047054 | MS.gene005379:intron | 25.0% |
| ! | GTAAATCTTCAAAACTGAAA+TGG | - | chr1.1:63047366-63047385 | MS.gene005379:intron | 25.0% |
| ! | GTTTCATTTGAATGAATTTG+AGG | - | chr1.1:63048423-63048442 | MS.gene005379:intron | 25.0% |
| ! | TAACTTCAGTATTTCATTCT+AGG | - | chr1.1:63047960-63047979 | MS.gene005379:intron | 25.0% |
| ! | TAGAATGAAATACTGAAGTT+AGG | + | chr1.1:63047961-63047980 | None:intergenic | 25.0% |
| ! | TATATAACATGGCAAATTAG+GGG | + | chr1.1:63046529-63046548 | None:intergenic | 25.0% |
| ! | TCAATTATTGTCAATGCATA+AGG | + | chr1.1:63049432-63049451 | None:intergenic | 25.0% |
| ! | TCACATTCACATATATAACA+TGG | + | chr1.1:63046540-63046559 | None:intergenic | 25.0% |
| ! | TGAATATTATCTGTTGACAT+AGG | - | chr1.1:63047635-63047654 | MS.gene005379:intron | 25.0% |
| ! | TGTTTGTTTCAATGAAAAGT+AGG | - | chr1.1:63047465-63047484 | MS.gene005379:intron | 25.0% |
| ! | TTCAGAAACAAAAACTTCAA+AGG | + | chr1.1:63046481-63046500 | None:intergenic | 25.0% |
| ! | TTGCTTAATATTCCAGTAAA+AGG | + | chr1.1:63047151-63047170 | None:intergenic | 25.0% |
| ! | TTTCATTCAACTGAACTATT+TGG | - | chr1.1:63047193-63047212 | MS.gene005379:intron | 25.0% |
| ! | TTTGCCATAAAATATTCACA+TGG | - | chr1.1:63049210-63049229 | MS.gene005379:intron | 25.0% |
| !! | GAATATTTTATGGCAAAAAC+AGG | + | chr1.1:63049207-63049226 | None:intergenic | 25.0% |
| !! | TGTGATAATAATGATGGAAA+TGG | + | chr1.1:63047990-63048009 | None:intergenic | 25.0% |
| !! | TTCTCCATGTGAATATTTTA+TGG | + | chr1.1:63049217-63049236 | None:intergenic | 25.0% |
| !! | TTTACAAATTTGTTTCCTTC+AGG | - | chr1.1:63047804-63047823 | MS.gene005379:intron | 25.0% |
| !!! | TAAATCTGTAGCTTTTGATT+TGG | - | chr1.1:63046635-63046654 | MS.gene005379:CDS | 25.0% |
| !!! | TGATTGCAGATTTTTTTAAC+TGG | - | chr1.1:63047283-63047302 | MS.gene005379:CDS | 25.0% |
| !!! | TTCTAGTTAGAAGTTTTGTT+GGG | - | chr1.1:63046900-63046919 | MS.gene005379:intron | 25.0% |
| !!! | TTTCTAGTTAGAAGTTTTGT+TGG | - | chr1.1:63046899-63046918 | MS.gene005379:intron | 25.0% |
| AAATTCATCGCAGTGTAAAA+TGG | + | chr1.1:63047866-63047885 | None:intergenic | 30.0% | |
| AATATAATAGATTTCCGTGC+TGG | - | chr1.1:63049107-63049126 | MS.gene005379:intron | 30.0% | |
| AGGATAACAAGTCTTTCTAT+TGG | - | chr1.1:63046863-63046882 | MS.gene005379:CDS | 30.0% | |
| AGTATTAAGAATGAATAGCG+GGG | + | chr1.1:63048558-63048577 | None:intergenic | 30.0% | |
| CAGTATTAAGAATGAATAGC+GGG | + | chr1.1:63048559-63048578 | None:intergenic | 30.0% | |
| CTACATCAACACTATATTCA+GGG | + | chr1.1:63048051-63048070 | None:intergenic | 30.0% | |
| CTACTCAAATTATGCTCAAA+AGG | - | chr1.1:63047226-63047245 | MS.gene005379:intron | 30.0% | |
| GATATCAATTATTACCGAAG+TGG | + | chr1.1:63048376-63048395 | None:intergenic | 30.0% | |
| GCAGTATTAAGAATGAATAG+CGG | + | chr1.1:63048560-63048579 | None:intergenic | 30.0% | |
| GTGAACCAGAACATTTATTA+TGG | + | chr1.1:63048786-63048805 | None:intergenic | 30.0% | |
| TAAAATCTGATACAGGATTC+AGG | - | chr1.1:63048911-63048930 | MS.gene005379:CDS | 30.0% | |
| TACATCAACACTATATTCAG+GGG | + | chr1.1:63048050-63048069 | None:intergenic | 30.0% | |
| ! | AAAGGATTTGCTTAACTGTT+TGG | - | chr1.1:63047244-63047263 | MS.gene005379:intron | 30.0% |
| ! | GAAAAAGTGATACCTTTTAC+TGG | - | chr1.1:63047136-63047155 | MS.gene005379:intron | 30.0% |
| ! | GAAAGCATAAACAATTTCCT+AGG | + | chr1.1:63049244-63049263 | None:intergenic | 30.0% |
| ! | TTCTTCTTTTTCTTCACTTG+TGG | - | chr1.1:63046182-63046201 | MS.gene005379:intron | 30.0% |
| !! | GACGATTCCATTATTTTTCA+TGG | - | chr1.1:63049304-63049323 | MS.gene005379:intron | 30.0% |
| !!! | AGTGTTATTTTCTCTTCCTT+AGG | + | chr1.1:63047535-63047554 | None:intergenic | 30.0% |
| !!! | TCTAGTTAGAAGTTTTGTTG+GGG | - | chr1.1:63046901-63046920 | MS.gene005379:intron | 30.0% |
| AAATCCAATTTCTGCAAGGT+GGG | - | chr1.1:63048806-63048825 | MS.gene005379:intron | 35.0% | |
| AACTGTATGAATGATGCCTA+AGG | - | chr1.1:63047516-63047535 | MS.gene005379:CDS | 35.0% | |
| ACAATCAATGTCCTTAACAG+CGG | + | chr1.1:63049505-63049524 | None:intergenic | 35.0% | |
| ACATCAACACTATATTCAGG+GGG | + | chr1.1:63048049-63048068 | None:intergenic | 35.0% | |
| ACCGTTGAAAAAATTCCTGA+GGG | + | chr1.1:63048086-63048105 | None:intergenic | 35.0% | |
| ACGTGGATCATCAAAATTCA+TGG | - | chr1.1:63047114-63047133 | MS.gene005379:intron | 35.0% | |
| AGAAAGATCCATGGTCAAAA+CGG | + | chr1.1:63048153-63048172 | None:intergenic | 35.0% | |
| AGCAGTGCCATGAAAAATAA+TGG | + | chr1.1:63049314-63049333 | None:intergenic | 35.0% | |
| AGTTCAGTTGAATGAAAACC+TGG | + | chr1.1:63047190-63047209 | None:intergenic | 35.0% | |
| ATACTAGCAATCAAGTTCTC+AGG | + | chr1.1:63048530-63048549 | None:intergenic | 35.0% | |
| GCTACATCAACACTATATTC+AGG | + | chr1.1:63048052-63048071 | None:intergenic | 35.0% | |
| GTGAAAATTCGTTACTGTGA+TGG | - | chr1.1:63047312-63047331 | MS.gene005379:intron | 35.0% | |
| TAATCATCTTGATCCCACTT+CGG | - | chr1.1:63048359-63048378 | MS.gene005379:intron | 35.0% | |
| TATTCAGGGGGAAAACAATT+AGG | + | chr1.1:63048037-63048056 | None:intergenic | 35.0% | |
| TCACAAATCCAATTTCTGCA+AGG | - | chr1.1:63048802-63048821 | MS.gene005379:intron | 35.0% | |
| TCTAGTGAAAGAAAGATCCA+TGG | + | chr1.1:63048162-63048181 | None:intergenic | 35.0% | |
| TGAAACTTGGTCATTTGAGA+TGG | - | chr1.1:63048244-63048263 | MS.gene005379:intron | 35.0% | |
| TTAAGTGAAATACTGTGGCA+GGG | - | chr1.1:63047040-63047059 | MS.gene005379:CDS | 35.0% | |
| TTACAATGCAAACCCAGAAA+AGG | + | chr1.1:63046074-63046093 | None:intergenic | 35.0% | |
| TTCACATGGAGAAAAATCCT+AGG | - | chr1.1:63049224-63049243 | MS.gene005379:intron | 35.0% | |
| TTCTCAAGATCAGGTCAAAA+TGG | - | chr1.1:63048961-63048980 | MS.gene005379:intron | 35.0% | |
| TTTAAGTGAAATACTGTGGC+AGG | - | chr1.1:63047039-63047058 | MS.gene005379:CDS | 35.0% | |
| ! | AAAAAAAGTGCAGTACCTGT+AGG | + | chr1.1:63048117-63048136 | None:intergenic | 35.0% |
| ! | AAAAAAGTGCAGTACCTGTA+GGG | + | chr1.1:63048116-63048135 | None:intergenic | 35.0% |
| ! | ACTGAACTATTTGGAGTTTC+TGG | - | chr1.1:63047202-63047221 | MS.gene005379:intron | 35.0% |
| ! | ATATCTTTTCCACTCATTGC+AGG | - | chr1.1:63048305-63048324 | MS.gene005379:CDS | 35.0% |
| ! | TATCTTTTCCACTCATTGCA+GGG | - | chr1.1:63048306-63048325 | MS.gene005379:CDS | 35.0% |
| ! | TTTTCATAGGTTACCTCTGT+TGG | - | chr1.1:63047411-63047430 | MS.gene005379:intron | 35.0% |
| !! | GAATATAGTGTTGATGTAGC+TGG | - | chr1.1:63048052-63048071 | MS.gene005379:intron | 35.0% |
| !! | TATCATTTTGATCGCGGATA+TGG | - | chr1.1:63046722-63046741 | MS.gene005379:intron | 35.0% |
| !!! | ACCCTCAGGAATTTTTTCAA+CGG | - | chr1.1:63048082-63048101 | MS.gene005379:intron | 35.0% |
| !!! | TTTGTTTTTGGCAGTCTGTT+TGG | - | chr1.1:63046682-63046701 | MS.gene005379:CDS | 35.0% |
| AATAACGCTCAAGAGAATCC+AGG | - | chr1.1:63047169-63047188 | MS.gene005379:intron | 40.0% | |
| AATTCAGAGGACAACGCATT+TGG | - | chr1.1:63047670-63047689 | MS.gene005379:intron | 40.0% | |
| AATTTAACCGCAAACCAGCA+CGG | + | chr1.1:63049124-63049143 | None:intergenic | 40.0% | |
| AGATGATTAGTACAAACGCG+TGG | + | chr1.1:63048348-63048367 | None:intergenic | 40.0% | |
| AGCAGCAGCAGATTGAATAA+TGG | + | chr1.1:63046232-63046251 | None:intergenic | 40.0% | |
| ATTCAATCTGCTGCTGCTAA+AGG | - | chr1.1:63046234-63046253 | MS.gene005379:intron | 40.0% | |
| CAAATCCAATTTCTGCAAGG+TGG | - | chr1.1:63048805-63048824 | MS.gene005379:intron | 40.0% | |
| CAATATGTAGGCAATTGCTC+TGG | - | chr1.1:63049452-63049471 | MS.gene005379:CDS | 40.0% | |
| CACCGTTGAAAAAATTCCTG+AGG | + | chr1.1:63048087-63048106 | None:intergenic | 40.0% | |
| GAAAGATCCATGGTCAAAAC+GGG | + | chr1.1:63048152-63048171 | None:intergenic | 40.0% | |
| GAAATAACCCAGCATCACTA+AGG | + | chr1.1:63047924-63047943 | None:intergenic | 40.0% | |
| GTGGAGGATTTGATGTCAAA+AGG | - | chr1.1:63047702-63047721 | MS.gene005379:CDS | 40.0% | |
| TACAGGATTCAGGAATCACA+TGG | - | chr1.1:63048921-63048940 | MS.gene005379:intron | 40.0% | |
| TACCTTATCTTCACTATCCC+CGG | + | chr1.1:63047349-63047368 | None:intergenic | 40.0% | |
| TTAATACTGCCTATGACTCG+TGG | - | chr1.1:63048570-63048589 | MS.gene005379:intron | 40.0% | |
| TTACACTGCGATGAATTTCG+AGG | - | chr1.1:63047868-63047887 | MS.gene005379:intron | 40.0% | |
| ! | ACTTCACTTTGGTAGTCCTT+GGG | + | chr1.1:63047900-63047919 | None:intergenic | 40.0% |
| ! | ATCACTAAGGCACTTCACTT+TGG | + | chr1.1:63047911-63047930 | None:intergenic | 40.0% |
| ! | TATTCCCAATGCTACTTCCT+TGG | - | chr1.1:63046990-63047009 | MS.gene005379:intron | 40.0% |
| !! | AGCACTTGTTTTCACCAACT+GGG | - | chr1.1:63046095-63046114 | MS.gene005379:CDS | 40.0% |
| !! | ATAGTGTTGATGTAGCTGGT+GGG | - | chr1.1:63048056-63048075 | MS.gene005379:intron | 40.0% |
| !! | CAGCTGGCTTGTTAATTTAG+AGG | - | chr1.1:63046757-63046776 | MS.gene005379:intron | 40.0% |
| !! | CCTGCTTATCATTTTGATCG+CGG | - | chr1.1:63046716-63046735 | MS.gene005379:intron | 40.0% |
| !! | GGAAAGAAGCACTGAAACAA+AGG | + | chr1.1:63048509-63048528 | None:intergenic | 40.0% |
| !! | TAGCACTTGTTTTCACCAAC+TGG | - | chr1.1:63046094-63046113 | MS.gene005379:CDS | 40.0% |
| !! | TATAGTGTTGATGTAGCTGG+TGG | - | chr1.1:63048055-63048074 | MS.gene005379:intron | 40.0% |
| !! | TTTTTGGCAGTCTGTTTGGA+TGG | - | chr1.1:63046686-63046705 | MS.gene005379:CDS | 40.0% |
| AATCTGAGAGGCAAGACACA+TGG | - | chr1.1:63049016-63049035 | MS.gene005379:intron | 45.0% | |
| AATTTCGAGGTCGTTTCCCA+AGG | - | chr1.1:63047881-63047900 | MS.gene005379:intron | 45.0% | |
| ACAGCCAAACAAAGCTGAGT+TGG | + | chr1.1:63046582-63046601 | None:intergenic | 45.0% | |
| ATCCAGAAAGAAGAGCCTGA+AGG | + | chr1.1:63047822-63047841 | None:intergenic | 45.0% | |
| ATGAAGGAGCTAAGCTTGAC+TGG | + | chr1.1:63048723-63048742 | None:intergenic | 45.0% | |
| ATGGTGATTCCAACCATGTG+AGG | + | chr1.1:63046213-63046232 | None:intergenic | 45.0% | |
| ATGTGTCTTGCCTCTCAGAT+TGG | + | chr1.1:63049017-63049036 | None:intergenic | 45.0% | |
| ATGTTTGTATAGCACCGCCA+AGG | + | chr1.1:63047010-63047029 | None:intergenic | 45.0% | |
| ATTTACCTGCCACGAGTCAT+AGG | + | chr1.1:63048582-63048601 | None:intergenic | 45.0% | |
| CACATGGTGAATGTTGTGAG+AGG | - | chr1.1:63048937-63048956 | MS.gene005379:intron | 45.0% | |
| CATGTGCTATCACAAGGGTA+AGG | + | chr1.1:63049528-63049547 | None:intergenic | 45.0% | |
| CCGCGATCAAAATGATAAGC+AGG | + | chr1.1:63046719-63046738 | None:intergenic | 45.0% | |
| CTAACAGCTAACACCAACAG+AGG | + | chr1.1:63047427-63047446 | None:intergenic | 45.0% | |
| CTCTCCTGTCATAGGAAACA+AGG | - | chr1.1:63049050-63049069 | MS.gene005379:intron | 45.0% | |
| GTCAAGCTTAGCTCCTTCAT+CGG | - | chr1.1:63048723-63048742 | MS.gene005379:intron | 45.0% | |
| GTGTATGTGTACAACCTGCT+TGG | + | chr1.1:63047739-63047758 | None:intergenic | 45.0% | |
| TACCGGGGATAGTGAAGATA+AGG | - | chr1.1:63047344-63047363 | MS.gene005379:intron | 45.0% | |
| TCAACCCACCTTGCAGAAAT+TGG | + | chr1.1:63048813-63048832 | None:intergenic | 45.0% | |
| TGATAGCACATGCCACCATT+TGG | - | chr1.1:63049536-63049555 | MS.gene005379:CDS | 45.0% | |
| TGCATTTGCATCAACCCAGT+TGG | + | chr1.1:63046112-63046131 | None:intergenic | 45.0% | |
| TGCGATAGACGCAAGTTCTA+CGG | + | chr1.1:63047084-63047103 | None:intergenic | 45.0% | |
| TTCACTATCCCCGGTAAAAG+AGG | + | chr1.1:63047340-63047359 | None:intergenic | 45.0% | |
| TTCCTTCAGGCTCTTCTTTC+TGG | - | chr1.1:63047817-63047836 | MS.gene005379:intron | 45.0% | |
| TTTGATCGCGGATATGGATC+CGG | - | chr1.1:63046728-63046747 | MS.gene005379:intron | 45.0% | |
| ! | CACTTCACTTTGGTAGTCCT+TGG | + | chr1.1:63047901-63047920 | None:intergenic | 45.0% |
| ! | CTCACCTTGTTTCCTATGAC+AGG | + | chr1.1:63049057-63049076 | None:intergenic | 45.0% |
| ! | TGAAGTGCCTTAGTGATGCT+GGG | - | chr1.1:63047914-63047933 | MS.gene005379:CDS | 45.0% |
| !! | GATCATTCCCGTTTTGACCA+TGG | - | chr1.1:63048142-63048161 | MS.gene005379:intron | 45.0% |
| !! | GTGACCAACTCAGCTTTGTT+TGG | - | chr1.1:63046575-63046594 | MS.gene005379:CDS | 45.0% |
| !! | TAGATTTCCGTGCTGGTTTG+CGG | - | chr1.1:63049114-63049133 | MS.gene005379:intron | 45.0% |
| !! | TGTGATGGTGCCTCTTTTAC+CGG | - | chr1.1:63047327-63047346 | MS.gene005379:intron | 45.0% |
| !! | TTTTGATGATCCACGTCGTG+TGG | + | chr1.1:63047110-63047129 | None:intergenic | 45.0% |
| !!! | GGGGACACACTTTTTTGTGA+AGG | - | chr1.1:63046920-63046939 | MS.gene005379:intron | 45.0% |
| AACAAGCCAGCTGTTTGCAC+CGG | + | chr1.1:63046750-63046769 | None:intergenic | 50.0% | |
| ACCGCCAAGGAAGTAGCATT+GGG | + | chr1.1:63046997-63047016 | None:intergenic | 50.0% | |
| AGTGAAATACTGTGGCAGGG+AGG | - | chr1.1:63047043-63047062 | MS.gene005379:CDS | 50.0% | |
| CAATGTCCTTAACAGCGGCT+CGG | + | chr1.1:63049500-63049519 | None:intergenic | 50.0% | |
| CAGAGGACAACGCATTTGGT+TGG | - | chr1.1:63047674-63047693 | MS.gene005379:intron | 50.0% | |
| CTTCTTTCTGGATGCTCAGC+TGG | - | chr1.1:63047829-63047848 | MS.gene005379:intron | 50.0% | |
| GCTGACAACTCTCCTGTCAT+AGG | - | chr1.1:63049042-63049061 | MS.gene005379:intron | 50.0% | |
| GCTGCACAGTTGCAATTCAG+AGG | - | chr1.1:63047657-63047676 | MS.gene005379:intron | 50.0% | |
| GGTGGCATGTGCTATCACAA+GGG | + | chr1.1:63049533-63049552 | None:intergenic | 50.0% | |
| GTGAGAGGCTTCTCAAGATC+AGG | - | chr1.1:63048952-63048971 | MS.gene005379:intron | 50.0% | |
| TAGGCAATTGCTCTGGCTGT+TGG | - | chr1.1:63049459-63049478 | MS.gene005379:CDS | 50.0% | |
| TGGTGGCATGTGCTATCACA+AGG | + | chr1.1:63049534-63049553 | None:intergenic | 50.0% | |
| TTGCTCACTGCCAATCTGAG+AGG | - | chr1.1:63049004-63049023 | MS.gene005379:intron | 50.0% | |
| ! | AGGAATGCGTTTTGCCAAGC+AGG | - | chr1.1:63047722-63047741 | MS.gene005379:CDS | 50.0% |
| ! | GTGAAGTGCCTTAGTGATGC+TGG | - | chr1.1:63047913-63047932 | MS.gene005379:CDS | 50.0% |
| ! | TCCCAATGCTACTTCCTTGG+CGG | - | chr1.1:63046993-63047012 | MS.gene005379:intron | 50.0% |
| ! | TTTTGACCGAGCCGCTGTTA+AGG | - | chr1.1:63049491-63049510 | MS.gene005379:CDS | 50.0% |
| !! | GTGATGGTGCCTCTTTTACC+GGG | - | chr1.1:63047328-63047347 | MS.gene005379:intron | 50.0% |
| !! | TGATGGTGCCTCTTTTACCG+GGG | - | chr1.1:63047329-63047348 | MS.gene005379:intron | 50.0% |
| ACTTGTGGCTCAGCCTCACA+TGG | - | chr1.1:63046197-63046216 | MS.gene005379:intron | 55.0% | |
| ATGGATCCGGTGCAAACAGC+TGG | - | chr1.1:63046741-63046760 | MS.gene005379:intron | 55.0% | |
| CAATCACGCCAATTGCCGTG+GGG | + | chr1.1:63048754-63048773 | None:intergenic | 55.0% | |
| CACCGCCAAGGAAGTAGCAT+TGG | + | chr1.1:63046998-63047017 | None:intergenic | 55.0% | |
| CTTTCTGGATGCTCAGCTGG+TGG | - | chr1.1:63047832-63047851 | MS.gene005379:intron | 55.0% | |
| GAAATACTGTGGCAGGGAGG+TGG | - | chr1.1:63047046-63047065 | MS.gene005379:CDS | 55.0% | |
| GCAATCACGCCAATTGCCGT+GGG | + | chr1.1:63048755-63048774 | None:intergenic | 55.0% | |
| TACTGCCTATGACTCGTGGC+AGG | - | chr1.1:63048574-63048593 | MS.gene005379:intron | 55.0% | |
| TATCGCAAGACCACACGACG+TGG | - | chr1.1:63047097-63047116 | MS.gene005379:intron | 55.0% | |
| TCTGCTGCTGCTAAAGGAGC+TGG | - | chr1.1:63046240-63046259 | MS.gene005379:intron | 55.0% | |
| TGCAATCACGCCAATTGCCG+TGG | + | chr1.1:63048756-63048775 | None:intergenic | 55.0% | |
| TTGCTCTGGCTGTTGGAGAC+TGG | - | chr1.1:63049466-63049485 | MS.gene005379:CDS | 55.0% | |
| TTTGCGCTCCCTGCAATGAG+TGG | + | chr1.1:63048317-63048336 | None:intergenic | 55.0% | |
| ! | ACGCATTTGGTTGGCTGCAG+TGG | - | chr1.1:63047683-63047702 | MS.gene005379:CDS | 55.0% |
| ! | CATTTGGTTGGCTGCAGTGG+AGG | - | chr1.1:63047686-63047705 | MS.gene005379:CDS | 55.0% |
| !! | CAACGGTGTTGTCACCCTAC+AGG | - | chr1.1:63048099-63048118 | MS.gene005379:intron | 55.0% |
| ACGCCAATTGCCGTGGGGAT+CGG | + | chr1.1:63048749-63048768 | None:intergenic | 60.0% | |
| ATACACGCGCGCGTGCACAT+TGG | - | chr1.1:63047753-63047772 | MS.gene005379:CDS | 60.0% | |
| GTGGCTCAGCCTCACATGGT+TGG | - | chr1.1:63046201-63046220 | MS.gene005379:intron | 60.0% | |
| TACTGTGGCAGGGAGGTGGT+TGG | - | chr1.1:63047050-63047069 | MS.gene005379:CDS | 60.0% | |
| ! | TAGCTGGTGGGCATACCCTC+AGG | - | chr1.1:63048068-63048087 | MS.gene005379:intron | 60.0% |
| CCTTCATCGGCCGATCCCCA+CGG | - | chr1.1:63048736-63048755 | MS.gene005379:intron | 65.0% | |
| CCGTGGGGATCGGCCGATGA+AGG | + | chr1.1:63048739-63048758 | None:intergenic | 70.0% | |
| CGGCCGATCCCCACGGCAAT+TGG | - | chr1.1:63048743-63048762 | MS.gene005379:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 63046063 | 63049569 | 63046063 | ID=MS.gene005379 |
| chr1.1 | mRNA | 63046063 | 63049569 | 63046063 | ID=MS.gene005379.t1;Parent=MS.gene005379 |
| chr1.1 | exon | 63049371 | 63049569 | 63049371 | ID=MS.gene005379.t1.exon1;Parent=MS.gene005379.t1 |
| chr1.1 | CDS | 63049371 | 63049569 | 63049371 | ID=cds.MS.gene005379.t1;Parent=MS.gene005379.t1 |
| chr1.1 | exon | 63048854 | 63048936 | 63048854 | ID=MS.gene005379.t1.exon2;Parent=MS.gene005379.t1 |
| chr1.1 | CDS | 63048854 | 63048936 | 63048854 | ID=cds.MS.gene005379.t1;Parent=MS.gene005379.t1 |
| chr1.1 | exon | 63048442 | 63048571 | 63048442 | ID=MS.gene005379.t1.exon3;Parent=MS.gene005379.t1 |
| chr1.1 | CDS | 63048442 | 63048571 | 63048442 | ID=cds.MS.gene005379.t1;Parent=MS.gene005379.t1 |
| chr1.1 | exon | 63048267 | 63048340 | 63048267 | ID=MS.gene005379.t1.exon4;Parent=MS.gene005379.t1 |
| chr1.1 | CDS | 63048267 | 63048340 | 63048267 | ID=cds.MS.gene005379.t1;Parent=MS.gene005379.t1 |
| chr1.1 | exon | 63047889 | 63047975 | 63047889 | ID=MS.gene005379.t1.exon5;Parent=MS.gene005379.t1 |
| chr1.1 | CDS | 63047889 | 63047975 | 63047889 | ID=cds.MS.gene005379.t1;Parent=MS.gene005379.t1 |
| chr1.1 | exon | 63047682 | 63047806 | 63047682 | ID=MS.gene005379.t1.exon6;Parent=MS.gene005379.t1 |
| chr1.1 | CDS | 63047682 | 63047806 | 63047682 | ID=cds.MS.gene005379.t1;Parent=MS.gene005379.t1 |
| chr1.1 | exon | 63047512 | 63047572 | 63047512 | ID=MS.gene005379.t1.exon7;Parent=MS.gene005379.t1 |
| chr1.1 | CDS | 63047512 | 63047572 | 63047512 | ID=cds.MS.gene005379.t1;Parent=MS.gene005379.t1 |
| chr1.1 | exon | 63047252 | 63047305 | 63047252 | ID=MS.gene005379.t1.exon8;Parent=MS.gene005379.t1 |
| chr1.1 | CDS | 63047252 | 63047305 | 63047252 | ID=cds.MS.gene005379.t1;Parent=MS.gene005379.t1 |
| chr1.1 | exon | 63047037 | 63047114 | 63047037 | ID=MS.gene005379.t1.exon9;Parent=MS.gene005379.t1 |
| chr1.1 | CDS | 63047037 | 63047114 | 63047037 | ID=cds.MS.gene005379.t1;Parent=MS.gene005379.t1 |
| chr1.1 | exon | 63046809 | 63046914 | 63046809 | ID=MS.gene005379.t1.exon10;Parent=MS.gene005379.t1 |
| chr1.1 | CDS | 63046809 | 63046914 | 63046809 | ID=cds.MS.gene005379.t1;Parent=MS.gene005379.t1 |
| chr1.1 | exon | 63046561 | 63046706 | 63046561 | ID=MS.gene005379.t1.exon11;Parent=MS.gene005379.t1 |
| chr1.1 | CDS | 63046561 | 63046706 | 63046561 | ID=cds.MS.gene005379.t1;Parent=MS.gene005379.t1 |
| chr1.1 | exon | 63046063 | 63046170 | 63046063 | ID=MS.gene005379.t1.exon12;Parent=MS.gene005379.t1 |
| chr1.1 | CDS | 63046063 | 63046170 | 63046063 | ID=cds.MS.gene005379.t1;Parent=MS.gene005379.t1 |
| Gene Sequence |
| Protein sequence |
