Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006743.t1 | RHN61912.1 | 94.5 | 757 | 37 | 1 | 1 | 757 | 10 | 761 | 0.00E+00 | 1437.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006743.t1 | B5WWZ8 | 78.9 | 757 | 150 | 7 | 1 | 756 | 1 | 748 | 0.0e+00 | 1197.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006743.t1 | A0A396I8H5 | 94.5 | 757 | 37 | 1 | 1 | 757 | 10 | 761 | 0.0e+00 | 1437.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene056569 | MS.gene006743 | PPI |
| MS.gene067993 | MS.gene006743 | PPI |
| MS.gene86456 | MS.gene006743 | PPI |
| MS.gene82943 | MS.gene006743 | PPI |
| MS.gene82942 | MS.gene006743 | PPI |
| MS.gene72746 | MS.gene006743 | PPI |
| MS.gene72745 | MS.gene006743 | PPI |
| MS.gene82452 | MS.gene006743 | PPI |
| MS.gene83396 | MS.gene006743 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006743.t1 | MTR_4g080823 | 93.307 | 762 | 45 | 2 | 1 | 761 | 10 | 766 | 0.0 | 1418 |
| MS.gene006743.t1 | MTR_4g080890 | 89.842 | 758 | 71 | 2 | 1 | 757 | 1 | 753 | 0.0 | 1362 |
| MS.gene006743.t1 | MTR_0651s0010 | 91.337 | 658 | 51 | 2 | 1 | 657 | 1 | 653 | 0.0 | 1194 |
| MS.gene006743.t1 | MTR_7g097210 | 57.257 | 751 | 296 | 11 | 6 | 752 | 5 | 734 | 0.0 | 840 |
| MS.gene006743.t1 | MTR_1g075650 | 61.235 | 583 | 175 | 9 | 171 | 752 | 3 | 535 | 0.0 | 717 |
| MS.gene006743.t1 | MTR_7g097210 | 61.565 | 575 | 208 | 7 | 179 | 752 | 2 | 564 | 0.0 | 695 |
| MS.gene006743.t1 | MTR_5g025650 | 43.583 | 787 | 377 | 17 | 12 | 754 | 64 | 827 | 0.0 | 594 |
| MS.gene006743.t1 | MTR_8g072210 | 41.774 | 778 | 385 | 13 | 19 | 754 | 57 | 808 | 0.0 | 564 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006743.t1 | AT3G23410 | 60.027 | 738 | 282 | 6 | 22 | 755 | 15 | 743 | 0.0 | 874 |
| MS.gene006743.t1 | AT4G28570 | 57.048 | 752 | 298 | 7 | 6 | 752 | 11 | 742 | 0.0 | 842 |
| MS.gene006743.t1 | AT4G28570 | 57.048 | 752 | 298 | 7 | 6 | 752 | 11 | 742 | 0.0 | 842 |
| MS.gene006743.t1 | AT3G23410 | 62.242 | 678 | 246 | 4 | 81 | 755 | 5 | 675 | 0.0 | 842 |
| MS.gene006743.t1 | AT1G03990 | 49.606 | 762 | 362 | 12 | 1 | 754 | 7 | 754 | 0.0 | 739 |
| MS.gene006743.t1 | AT4G19380 | 43.043 | 769 | 382 | 16 | 13 | 754 | 27 | 766 | 0.0 | 560 |
| MS.gene006743.t1 | AT4G19380 | 43.426 | 753 | 372 | 15 | 27 | 754 | 1 | 724 | 0.0 | 555 |
Find 150 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACATTTCTTCTTCTTTC+TGG | 0.073106 | 4.1:+25778010 | None:intergenic |
| GTCCCTTGTTTCTCTCCTTT+TGG | 0.180580 | 4.1:+25778137 | None:intergenic |
| TCTTGTTTGAAAATAATTAT+AGG | 0.260541 | 4.1:-25778043 | MS.gene006743:CDS |
| CAACTTCTCAAGCTTGTCTT+TGG | 0.271024 | 4.1:-25779097 | MS.gene006743:CDS |
| TGATTCCCTGGTGAATTTCT+TGG | 0.279412 | 4.1:+25778188 | None:intergenic |
| TTTCTTCTTCTTTCTGGTAT+TGG | 0.293147 | 4.1:+25778016 | None:intergenic |
| GTGATTAAATGTGCTGTTCT+TGG | 0.295870 | 4.1:+25777166 | None:intergenic |
| ATGGACCAACAATATGAAAA+TGG | 0.302883 | 4.1:-25778497 | MS.gene006743:CDS |
| CTTGAGAAGTTGTGGATAAA+TGG | 0.306281 | 4.1:+25779108 | None:intergenic |
| AAACCACTAGAGATCATTAA+TGG | 0.311728 | 4.1:+25777891 | None:intergenic |
| TATTGTGGTTCATGTGGTTA+TGG | 0.314221 | 4.1:-25778164 | MS.gene006743:CDS |
| TATTGATAAGGGTGATTCTA+TGG | 0.316225 | 4.1:-25779194 | MS.gene006743:CDS |
| GTTGATTGAATAGTAATCAT+AGG | 0.337491 | 4.1:+25776728 | None:intergenic |
| CAGAAAGAAGAAGAAATGTT+TGG | 0.347440 | 4.1:-25778009 | MS.gene006743:CDS |
| TAAGCGAATGCGAGTCTAAA+AGG | 0.353718 | 4.1:+25779024 | None:intergenic |
| TTCTAGTGATGAATAATCTT+CGG | 0.371885 | 4.1:+25778529 | None:intergenic |
| TCAATATATCCATGGGAATC+AGG | 0.373653 | 4.1:-25777220 | MS.gene006743:CDS |
| CATTGTCACCAGGTGAGAAT+TGG | 0.377821 | 4.1:-25776901 | MS.gene006743:CDS |
| AGAAAAGGGTGTCAAAATCT+TGG | 0.379576 | 4.1:-25778230 | MS.gene006743:CDS |
| TGGCTTATATCAACAAGGTT+GGG | 0.380283 | 4.1:-25779174 | MS.gene006743:CDS |
| GTATACTTCTGCTCATCAAA+TGG | 0.389845 | 4.1:-25776873 | MS.gene006743:CDS |
| TATACTTCTGCTCATCAAAT+GGG | 0.393187 | 4.1:-25776872 | MS.gene006743:CDS |
| TGCTCTGTCTTAGTAAGAAA+TGG | 0.394689 | 4.1:-25779131 | MS.gene006743:CDS |
| CAAAATCAAGTATTAAGAAA+AGG | 0.411212 | 4.1:-25778245 | MS.gene006743:CDS |
| TCTCTAGAACAATCACTTTG+TGG | 0.413037 | 4.1:+25778570 | None:intergenic |
| GATTCTACTGTTTAAAGTCT+TGG | 0.419421 | 4.1:+25777977 | None:intergenic |
| CAGAAGCAGTAATATTGATA+AGG | 0.422013 | 4.1:-25779206 | MS.gene006743:CDS |
| TCTAGTGATGAATAATCTTC+GGG | 0.422485 | 4.1:+25778530 | None:intergenic |
| GATGCAGTAGTTGTTGGTTC+TGG | 0.425266 | 4.1:-25778635 | MS.gene006743:CDS |
| AGAAAGAAGAAGAAATGTTT+GGG | 0.431123 | 4.1:-25778008 | MS.gene006743:CDS |
| TTAATAATGATGATACTTTG+TGG | 0.431271 | 4.1:+25777311 | None:intergenic |
| TTGGGGACTTTGTTGATTTG+TGG | 0.432818 | 4.1:-25779156 | MS.gene006743:CDS |
| TGTGGTTATGGTTGTCCAAA+AGG | 0.434505 | 4.1:-25778152 | MS.gene006743:CDS |
| GTAGTTGTTGGTTCTGGCTG+TGG | 0.438334 | 4.1:-25778629 | MS.gene006743:CDS |
| CTTGTAGATGCTGTTGAAAA+AGG | 0.445193 | 4.1:-25778101 | MS.gene006743:CDS |
| GAAGGTGCTGTTGATGAAAA+TGG | 0.445503 | 4.1:-25776821 | MS.gene006743:CDS |
| AAAGGTGCTGTGATCATAAC+AGG | 0.453948 | 4.1:-25778083 | MS.gene006743:CDS |
| GTGGTGGTTCAGCTGTTAAT+TGG | 0.455365 | 4.1:-25778418 | MS.gene006743:CDS |
| GCATCATCCATTGGCAATGA+AGG | 0.456373 | 4.1:+25780510 | None:intergenic |
| ACCTGCAGAAATTGTCACTT+TGG | 0.458514 | 4.1:+25777932 | None:intergenic |
| CAGAAATGTTGAAGAAAGAC+TGG | 0.461374 | 4.1:+25780439 | None:intergenic |
| ACTCACGTATATACCTCGTC+AGG | 0.463841 | 4.1:+25780399 | None:intergenic |
| TAATGAGAACACTAGCGAAC+AGG | 0.464546 | 4.1:-25776966 | MS.gene006743:CDS |
| TATCCGATGGCTTTCCATGC+CGG | 0.465397 | 4.1:+25778830 | None:intergenic |
| AAAATCAAGTATTAAGAAAA+GGG | 0.465765 | 4.1:-25778244 | MS.gene006743:CDS |
| TCATATTGTTGGTCCATTGA+AGG | 0.466560 | 4.1:+25778503 | None:intergenic |
| AAAGTGATTGTTCTAGAGAA+AGG | 0.469246 | 4.1:-25778566 | MS.gene006743:CDS |
| GTATATACCTCGTCAGGGAT+TGG | 0.472564 | 4.1:+25780405 | None:intergenic |
| ATGGCTTATATCAACAAGGT+TGG | 0.474407 | 4.1:-25779175 | MS.gene006743:CDS |
| GAAGAAATGTTTGGGAGTGT+TGG | 0.474637 | 4.1:-25778000 | MS.gene006743:CDS |
| TGCAGAGGGCTCTCAAGCTT+AGG | 0.477034 | 4.1:-25779056 | MS.gene006743:CDS |
| TCAAATGGGGAGTTGTAGAA+TGG | 0.477133 | 4.1:-25776858 | MS.gene006743:CDS |
| GCTTCTGTCCTTTCAAATGC+AGG | 0.481266 | 4.1:-25778593 | MS.gene006743:CDS |
| TTGCATTAAAACACCAGAAA+AGG | 0.481522 | 4.1:-25778390 | MS.gene006743:CDS |
| GTTGGTTCTGGCTGTGGAGG+AGG | 0.482681 | 4.1:-25778623 | MS.gene006743:CDS |
| CAGAAAAGGTGTTGAAAGAA+TGG | 0.485140 | 4.1:-25778376 | MS.gene006743:CDS |
| AAATGTGATGCAGTAGTTGT+TGG | 0.485936 | 4.1:-25778641 | MS.gene006743:CDS |
| GGTGACAATGCTCCTTCCAT+TGG | 0.486201 | 4.1:+25776914 | None:intergenic |
| AGAAGCAGTAATATTGATAA+GGG | 0.492373 | 4.1:-25779205 | MS.gene006743:CDS |
| CTTTGTGGCCTGCATTTGAA+AGG | 0.494540 | 4.1:+25778585 | None:intergenic |
| CACAATGAAGCTACAAATTG+AGG | 0.494663 | 4.1:-25777955 | MS.gene006743:CDS |
| TGATGAAAATGGTGAGAGTT+GGG | 0.496388 | 4.1:-25776810 | MS.gene006743:CDS |
| CATAGAGTATCTATCTGCTA+TGG | 0.499902 | 4.1:-25778321 | MS.gene006743:CDS |
| CATTTGCATCAATATATCCA+TGG | 0.503382 | 4.1:-25777228 | MS.gene006743:CDS |
| GAAGATTATTCATCACTAGA+AGG | 0.507111 | 4.1:-25778527 | MS.gene006743:CDS |
| TGTGTTGCCTTCATTGCCAA+TGG | 0.507516 | 4.1:-25780517 | MS.gene006743:CDS |
| GCTGGTTCAACAGTAGGTGG+TGG | 0.508719 | 4.1:-25778434 | MS.gene006743:CDS |
| GCAGCAGGAGCTGTTGAAGT+AGG | 0.511117 | 4.1:-25777022 | MS.gene006743:CDS |
| TATCCCCATGTCATTAGTAC+AGG | 0.513550 | 4.1:+25777831 | None:intergenic |
| ATCACTAGAAGGTCCTTCAA+TGG | 0.515670 | 4.1:-25778516 | MS.gene006743:CDS |
| AGTGTGCTTCCAACTGCTGT+TGG | 0.516894 | 4.1:-25776758 | MS.gene006743:CDS |
| TTTCTAAGAGCATCATCCAT+TGG | 0.520961 | 4.1:+25780501 | None:intergenic |
| ATAATTGAGACACCATTACT+AGG | 0.525334 | 4.1:-25777259 | MS.gene006743:CDS |
| TTGAGTCAAGTGTGACATTG+AGG | 0.526976 | 4.1:+25778684 | None:intergenic |
| ATGGAAAGCCATCGGATATG+AGG | 0.528852 | 4.1:-25778825 | MS.gene006743:CDS |
| AAAGTGACAATTTCTGCAGG+TGG | 0.529305 | 4.1:-25777930 | MS.gene006743:CDS |
| AGAAGAAAACAAAGAGGCAT+AGG | 0.530309 | 4.1:+25778992 | None:intergenic |
| AATGAAAATTGTACACAAGA+AGG | 0.531263 | 4.1:-25778272 | MS.gene006743:CDS |
| TTGATTGAATAGTAATCATA+GGG | 0.531890 | 4.1:+25776729 | None:intergenic |
| GGCTTATATCAACAAGGTTG+GGG | 0.532309 | 4.1:-25779173 | MS.gene006743:CDS |
| AAGACAAGCTTGAGAAGTTG+TGG | 0.536089 | 4.1:+25779100 | None:intergenic |
| CTGAGAATTCTAATAGCAGC+AGG | 0.537001 | 4.1:-25777037 | MS.gene006743:CDS |
| TATCGATAGTGTTTATCCAA+TGG | 0.545025 | 4.1:-25776930 | MS.gene006743:CDS |
| GCCAAAGTGACAATTTCTGC+AGG | 0.549592 | 4.1:-25777933 | MS.gene006743:CDS |
| TTGATGAAAATGGTGAGAGT+TGG | 0.551525 | 4.1:-25776811 | MS.gene006743:CDS |
| AAGAGAAAAGATTGTGCAGA+GGG | 0.551533 | 4.1:-25779070 | MS.gene006743:CDS |
| TTTGTCATCCATTGTTGAGT+GGG | 0.551643 | 4.1:-25780614 | MS.gene006743:CDS |
| CAAATGGGGAGTTGTAGAAT+GGG | 0.552016 | 4.1:-25776857 | MS.gene006743:CDS |
| TGTCACAGGTAAAATCTATG+AGG | 0.552231 | 4.1:-25777353 | MS.gene006743:intron |
| GGGTTAACACCAACAGCAGT+TGG | 0.556806 | 4.1:+25776749 | None:intergenic |
| GAACCACAATAATGATTCCC+TGG | 0.558303 | 4.1:+25778176 | None:intergenic |
| TTTGCTGGTTCAACAGTAGG+TGG | 0.559029 | 4.1:-25778437 | MS.gene006743:CDS |
| AATCATTATTGTGGTTCATG+TGG | 0.563673 | 4.1:-25778170 | MS.gene006743:CDS |
| TATATTGATGCAAATGATGA+TGG | 0.566974 | 4.1:+25777235 | None:intergenic |
| TCCATCCTGTACTAATGACA+TGG | 0.567525 | 4.1:-25777836 | MS.gene006743:CDS |
| GGTGAGAGTTGGGAAGCTGA+AGG | 0.571561 | 4.1:-25776800 | MS.gene006743:CDS |
| GTGAGAGTTGGGAAGCTGAA+GGG | 0.574364 | 4.1:-25776799 | MS.gene006743:CDS |
| AAGTGACAATTTCTGCAGGT+GGG | 0.574604 | 4.1:-25777929 | MS.gene006743:CDS |
| TCTCTCACCCCACTCAACAA+TGG | 0.575157 | 4.1:+25780606 | None:intergenic |
| AAGTCAAGTCCTGATTCCCA+TGG | 0.575765 | 4.1:+25777211 | None:intergenic |
| AGTGACAATTTCTGCAGGTG+GGG | 0.576018 | 4.1:-25777928 | MS.gene006743:CDS |
| ATAATAAGAGACAAAGCAAG+TGG | 0.576779 | 4.1:-25777142 | MS.gene006743:CDS |
| GATAGAGAGAATATGAGAGC+TGG | 0.578200 | 4.1:-25777073 | MS.gene006743:CDS |
| ATTGTTGAGTGGGGTGAGAG+AGG | 0.578457 | 4.1:-25780604 | MS.gene006743:CDS |
| CCCATGTCATTAGTACAGGA+TGG | 0.579090 | 4.1:+25777835 | None:intergenic |
| GTTGTTGGTTCTGGCTGTGG+AGG | 0.580402 | 4.1:-25778626 | MS.gene006743:CDS |
| ATTTGCATCAATATATCCAT+GGG | 0.581262 | 4.1:-25777227 | MS.gene006743:CDS |
| TAGAATGGGAGTGAATGAAA+AGG | 0.583569 | 4.1:-25776843 | MS.gene006743:CDS |
| TCACCAGGGAATCATTATTG+TGG | 0.584122 | 4.1:-25778179 | MS.gene006743:CDS |
| GTTTGTCATCCATTGTTGAG+TGG | 0.586629 | 4.1:-25780615 | MS.gene006743:CDS |
| AACAAGGGACTCAAGTTACA+TGG | 0.588903 | 4.1:-25778124 | MS.gene006743:CDS |
| GATAGTGTTTATCCAATGGA+AGG | 0.598350 | 4.1:-25776926 | MS.gene006743:CDS |
| AGTTGTGTCATGTTCATGCA+TGG | 0.599087 | 4.1:+25778733 | None:intergenic |
| GAAACTGTGTGTGAGAGGAT+TGG | 0.599841 | 4.1:-25778299 | MS.gene006743:CDS |
| TACAAATTCCAATTCTCACC+TGG | 0.600068 | 4.1:+25776893 | None:intergenic |
| CTATGGAAACTGTGTGTGAG+AGG | 0.600732 | 4.1:-25778304 | MS.gene006743:CDS |
| TTGTCATCCATTGTTGAGTG+GGG | 0.601389 | 4.1:-25780613 | MS.gene006743:CDS |
| ATGGAAGGAGCATTGTCACC+AGG | 0.601599 | 4.1:-25776911 | MS.gene006743:CDS |
| CAACAATCTCTATCTAACAA+AGG | 0.604364 | 4.1:-25778707 | MS.gene006743:CDS |
| GTAGGAACACACAGAAGTGA+TGG | 0.615648 | 4.1:-25777004 | MS.gene006743:CDS |
| GTCACAGGTAAAATCTATGA+GGG | 0.616658 | 4.1:-25777352 | MS.gene006743:intron |
| TTCTATGGCTTATATCAACA+AGG | 0.617366 | 4.1:-25779179 | MS.gene006743:CDS |
| CCATCCTGTACTAATGACAT+GGG | 0.618479 | 4.1:-25777835 | MS.gene006743:CDS |
| TGTCCAAAAGGAGAGAAACA+AGG | 0.624436 | 4.1:-25778140 | MS.gene006743:CDS |
| TGTTGATACCTCATATCCGA+TGG | 0.624751 | 4.1:+25778817 | None:intergenic |
| AAAATGGTGATAATCCGGCA+TGG | 0.627391 | 4.1:-25778844 | MS.gene006743:CDS |
| GCTGAGATGTTAGTGAAGAG+TGG | 0.628102 | 4.1:-25779234 | MS.gene006743:CDS |
| AATCCGGCATGGAAAGCCAT+CGG | 0.629555 | 4.1:-25778833 | MS.gene006743:CDS |
| CCACCATTAATGATCTCTAG+TGG | 0.630098 | 4.1:-25777894 | MS.gene006743:CDS |
| GAATCAAAATCAGATCTCAA+AGG | 0.635229 | 4.1:-25777801 | MS.gene006743:intron |
| CTCACGTATATACCTCGTCA+GGG | 0.638165 | 4.1:+25780400 | None:intergenic |
| ATGGGAGTGAATGAAAAGGA+AGG | 0.638461 | 4.1:-25776839 | MS.gene006743:CDS |
| CCCAAGAGAAGAAAACAAAG+AGG | 0.641068 | 4.1:+25778986 | None:intergenic |
| ATGAGAGCTGGTTTACAACA+AGG | 0.645336 | 4.1:-25777061 | MS.gene006743:CDS |
| GACCAACAATATGAAAATGG+AGG | 0.646970 | 4.1:-25778494 | MS.gene006743:CDS |
| AATGATGATGGTCCTAGTAA+TGG | 0.648405 | 4.1:+25777247 | None:intergenic |
| GTCACTAACAAGCATATGTG+AGG | 0.652709 | 4.1:-25780541 | MS.gene006743:CDS |
| GGTGTTGAAAGAATGGTCAG+AGG | 0.659062 | 4.1:-25778369 | MS.gene006743:CDS |
| GTCCAAAAGGAGAGAAACAA+GGG | 0.659274 | 4.1:-25778139 | MS.gene006743:CDS |
| TATGTGCCAAGAAATTCACC+AGG | 0.661064 | 4.1:-25778194 | MS.gene006743:CDS |
| ATACTTCTGCTCATCAAATG+GGG | 0.665706 | 4.1:-25776871 | MS.gene006743:CDS |
| AAAGAGAAAAGATTGTGCAG+AGG | 0.669869 | 4.1:-25779071 | MS.gene006743:CDS |
| GAGGATAGCAAATACAAACA+TGG | 0.673701 | 4.1:-25780585 | MS.gene006743:CDS |
| TATGTATCCAATCCCTGACG+AGG | 0.674932 | 4.1:-25780412 | MS.gene006743:intron |
| ACAGGTAAAATCTATGAGGG+AGG | 0.676529 | 4.1:-25777349 | MS.gene006743:intron |
| CCACTAGAGATCATTAATGG+TGG | 0.685061 | 4.1:+25777894 | None:intergenic |
| TGATTATGATGAATCAAGCA+AGG | 0.685314 | 4.1:-25780466 | MS.gene006743:CDS |
| ATGCGAGTCTAAAAGGAGTG+AGG | 0.691376 | 4.1:+25779031 | None:intergenic |
| CATCCTGTACTAATGACATG+GGG | 0.691532 | 4.1:-25777834 | MS.gene006743:CDS |
| ATGTGCCAAGAAATTCACCA+GGG | 0.759136 | 4.1:-25778193 | MS.gene006743:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTAAAATAACAACAT+CGG | - | chr4.1:25777415-25777434 | MS.gene006743:intron | 10.0% |
| !!! | ACTTCTTATAAATTTATTTT+AGG | + | chr4.1:25777650-25777669 | None:intergenic | 10.0% |
| !!! | CTTCTTATAAATTTATTTTA+GGG | + | chr4.1:25777649-25777668 | None:intergenic | 10.0% |
| !! | AAAATCAAGTATTAAGAAAA+GGG | - | chr4.1:25779041-25779060 | MS.gene006743:CDS | 15.0% |
| !! | ACTCTTTATAAAATTATGTA+AGG | + | chr4.1:25777861-25777880 | None:intergenic | 15.0% |
| !! | ATAATGTAAAGATCTAATAT+GGG | - | chr4.1:25777714-25777733 | MS.gene006743:intron | 15.0% |
| !!! | AATAGTTGACAAATTTTAAT+TGG | - | chr4.1:25777160-25777179 | MS.gene006743:CDS | 15.0% |
| !!! | ATGAAAAATTTTAGAGTAAA+GGG | + | chr4.1:25777603-25777622 | None:intergenic | 15.0% |
| !!! | TATGAAAAATTTTAGAGTAA+AGG | + | chr4.1:25777604-25777623 | None:intergenic | 15.0% |
| !!! | TCTTGTTTGAAAATAATTAT+AGG | - | chr4.1:25779242-25779261 | MS.gene006743:intron | 15.0% |
| !! | AAATTGAACTTTAAACTTTC+AGG | + | chr4.1:25777487-25777506 | None:intergenic | 20.0% |
| !! | ATAACTTTGTACCAATAATA+TGG | + | chr4.1:25779553-25779572 | None:intergenic | 20.0% |
| !! | ATATAAGTTTGTAAGATAAG+AGG | + | chr4.1:25777888-25777907 | None:intergenic | 20.0% |
| !! | CAAAATCAAGTATTAAGAAA+AGG | - | chr4.1:25779040-25779059 | MS.gene006743:CDS | 20.0% |
| !! | CAAATAAGATATATTAGATG+AGG | + | chr4.1:25777956-25777975 | None:intergenic | 20.0% |
| !! | CAATTAAAATTGAACAGTTA+TGG | - | chr4.1:25777357-25777376 | MS.gene006743:intron | 20.0% |
| !! | CATAATGTAAAGATCTAATA+TGG | - | chr4.1:25777713-25777732 | MS.gene006743:intron | 20.0% |
| !! | GGTTTAAAGAATAAAAACAT+TGG | - | chr4.1:25779412-25779431 | MS.gene006743:intron | 20.0% |
| !! | TAAAGAATAAAAACATTGGT+AGG | - | chr4.1:25779416-25779435 | MS.gene006743:intron | 20.0% |
| !! | TAACGTTAAATCATATTAGT+CGG | + | chr4.1:25777316-25777335 | None:intergenic | 20.0% |
| !! | TTAATAATGATGATACTTTG+TGG | + | chr4.1:25779977-25779996 | None:intergenic | 20.0% |
| !! | TTGATTGAATAGTAATCATA+GGG | + | chr4.1:25780559-25780578 | None:intergenic | 20.0% |
| !!! | ATTTTGTAGGTTGATAAAAA+TGG | - | chr4.1:25778425-25778444 | MS.gene006743:CDS | 20.0% |
| !!! | CTTTTCTTAATACTTGATTT+TGG | + | chr4.1:25779042-25779061 | None:intergenic | 20.0% |
| !!! | GTTTTGTTTAACCATATTAT+TGG | - | chr4.1:25779539-25779558 | MS.gene006743:intron | 20.0% |
| ! | AATGAAAATTGTACACAAGA+AGG | - | chr4.1:25779013-25779032 | MS.gene006743:CDS | 25.0% |
| ! | AGAAAGAAGAAGAAATGTTT+GGG | - | chr4.1:25779277-25779296 | MS.gene006743:intron | 25.0% |
| ! | AGAAGCAGTAATATTGATAA+GGG | - | chr4.1:25778080-25778099 | MS.gene006743:CDS | 25.0% |
| ! | ATCTTAACTAGTTACATGTT+TGG | - | chr4.1:25779775-25779794 | MS.gene006743:intron | 25.0% |
| ! | ATTTGCATCAATATATCCAT+GGG | - | chr4.1:25780058-25780077 | MS.gene006743:intron | 25.0% |
| ! | GTTGATTGAATAGTAATCAT+AGG | + | chr4.1:25780560-25780579 | None:intergenic | 25.0% |
| ! | TATATTGATGCAAATGATGA+TGG | + | chr4.1:25780053-25780072 | None:intergenic | 25.0% |
| ! | TGATAAAAATGGTGATAATC+CGG | - | chr4.1:25778436-25778455 | MS.gene006743:CDS | 25.0% |
| ! | TGGTGTGTAATATAAAAAGT+TGG | + | chr4.1:25777765-25777784 | None:intergenic | 25.0% |
| ! | TTCTAGTGATGAATAATCTT+CGG | + | chr4.1:25778759-25778778 | None:intergenic | 25.0% |
| ! | TTTGTGTTTGTTTGATATCA+CGG | + | chr4.1:25779857-25779876 | None:intergenic | 25.0% |
| !! | AATAGGATTGTAGATTTTCT+TGG | - | chr4.1:25780596-25780615 | MS.gene006743:CDS | 25.0% |
| !! | ATTGTAGATTTTCTTGGAAA+GGG | - | chr4.1:25780602-25780621 | MS.gene006743:CDS | 25.0% |
| !! | CAAAGTTATCACTAATTTTC+CGG | - | chr4.1:25779564-25779583 | MS.gene006743:intron | 25.0% |
| !! | CTGCATTTTGTATTTCAAAT+AGG | - | chr4.1:25780579-25780598 | MS.gene006743:CDS | 25.0% |
| !! | TTAAGAAAGTGACATTTTGT+AGG | - | chr4.1:25778412-25778431 | MS.gene006743:CDS | 25.0% |
| !! | TTCTATAATTCCCTTTTCAA+GGG | + | chr4.1:25778531-25778550 | None:intergenic | 25.0% |
| !! | TTGCATTTAGGAATTTCTTT+TGG | + | chr4.1:25776969-25776988 | None:intergenic | 25.0% |
| !! | TTTCTATAATTCCCTTTTCA+AGG | + | chr4.1:25778532-25778551 | None:intergenic | 25.0% |
| !!! | TCAAGAATAGTTATTTTTGC+TGG | - | chr4.1:25778833-25778852 | MS.gene006743:CDS | 25.0% |
| AAACCACTAGAGATCATTAA+TGG | + | chr4.1:25779397-25779416 | None:intergenic | 30.0% | |
| AATCATTATTGTGGTTCATG+TGG | - | chr4.1:25779115-25779134 | MS.gene006743:CDS | 30.0% | |
| ACTCAAAATGTTTGGTATAG+TGG | - | chr4.1:25777442-25777461 | MS.gene006743:intron | 30.0% | |
| ACTCGTACCAATATAAAGTT+GGG | - | chr4.1:25779702-25779721 | MS.gene006743:intron | 30.0% | |
| ATAATAAGAGACAAAGCAAG+TGG | - | chr4.1:25780143-25780162 | MS.gene006743:intron | 30.0% | |
| ATAATTGAGACACCATTACT+AGG | - | chr4.1:25780026-25780045 | MS.gene006743:intron | 30.0% | |
| ATGGACCAACAATATGAAAA+TGG | - | chr4.1:25778788-25778807 | MS.gene006743:CDS | 30.0% | |
| ATTATTGTGAGTGTACGAAA+TGG | + | chr4.1:25778358-25778377 | None:intergenic | 30.0% | |
| ATTCAGCTCATAGGAAAAAT+AGG | + | chr4.1:25779896-25779915 | None:intergenic | 30.0% | |
| ATTTGAACACATGCAAACTA+TGG | - | chr4.1:25777926-25777945 | MS.gene006743:CDS | 30.0% | |
| CAAACATTTCTTCTTCTTTC+TGG | + | chr4.1:25779278-25779297 | None:intergenic | 30.0% | |
| CAACAATCTCTATCTAACAA+AGG | - | chr4.1:25778578-25778597 | MS.gene006743:CDS | 30.0% | |
| CAGAAAGAAGAAGAAATGTT+TGG | - | chr4.1:25779276-25779295 | MS.gene006743:intron | 30.0% | |
| CAGAAGCAGTAATATTGATA+AGG | - | chr4.1:25778079-25778098 | MS.gene006743:CDS | 30.0% | |
| CATTTGCATCAATATATCCA+TGG | - | chr4.1:25780057-25780076 | MS.gene006743:intron | 30.0% | |
| CCTGTCCAAAATTGTTAATT+TGG | + | chr4.1:25777790-25777809 | None:intergenic | 30.0% | |
| GAAGATTATTCATCACTAGA+AGG | - | chr4.1:25778758-25778777 | MS.gene006743:CDS | 30.0% | |
| GAATCAAAATCAGATCTCAA+AGG | - | chr4.1:25779484-25779503 | MS.gene006743:intron | 30.0% | |
| GTTCAACATAGAAATAGTGT+TGG | - | chr4.1:25777829-25777848 | MS.gene006743:CDS | 30.0% | |
| TACTCTACCCAACTTTATAT+TGG | + | chr4.1:25779712-25779731 | None:intergenic | 30.0% | |
| TAGATGTAAATTCAGCTCAT+AGG | + | chr4.1:25779905-25779924 | None:intergenic | 30.0% | |
| TATACTTCTGCTCATCAAAT+GGG | - | chr4.1:25780413-25780432 | MS.gene006743:CDS | 30.0% | |
| TATCGATAGTGTTTATCCAA+TGG | - | chr4.1:25780355-25780374 | MS.gene006743:intron | 30.0% | |
| TATTGATAAGGGTGATTCTA+TGG | - | chr4.1:25778091-25778110 | MS.gene006743:CDS | 30.0% | |
| TCGGAAAAACTCAAAATGTT+TGG | - | chr4.1:25777434-25777453 | MS.gene006743:intron | 30.0% | |
| TCTAGTGATGAATAATCTTC+GGG | + | chr4.1:25778758-25778777 | None:intergenic | 30.0% | |
| TGATTATGATGAATCAAGCA+AGG | - | chr4.1:25776819-25776838 | MS.gene006743:CDS | 30.0% | |
| TTCTATGGCTTATATCAACA+AGG | - | chr4.1:25778106-25778125 | MS.gene006743:CDS | 30.0% | |
| TTGCATTAAAACACCAGAAA+AGG | - | chr4.1:25778895-25778914 | MS.gene006743:intron | 30.0% | |
| TTTGAACACATGCAAACTAT+GGG | - | chr4.1:25777927-25777946 | MS.gene006743:CDS | 30.0% | |
| ! | AATTAACAATTTTGGACAGG+AGG | - | chr4.1:25777790-25777809 | MS.gene006743:intron | 30.0% |
| ! | ACATCTATATGATTTGTCAC+AGG | - | chr4.1:25779918-25779937 | MS.gene006743:intron | 30.0% |
| ! | ATACAAACATGGATTTTCTG+TGG | - | chr4.1:25776711-25776730 | MS.gene006743:CDS | 30.0% |
| ! | ATTAACAATTTTGGACAGGA+GGG | - | chr4.1:25777791-25777810 | MS.gene006743:intron | 30.0% |
| ! | CAATTTCTGCTTGTGTTTTT+AGG | - | chr4.1:25777501-25777520 | MS.gene006743:intron | 30.0% |
| ! | CCAAAATTGTTAATTTGGCT+TGG | + | chr4.1:25777785-25777804 | None:intergenic | 30.0% |
| ! | CCAAATTAACAATTTTGGAC+AGG | - | chr4.1:25777787-25777806 | MS.gene006743:intron | 30.0% |
| ! | CCAAGCCAAATTAACAATTT+TGG | - | chr4.1:25777782-25777801 | MS.gene006743:intron | 30.0% |
| ! | CCTTGCAAGTCAATTTTATA+TGG | - | chr4.1:25777680-25777699 | MS.gene006743:intron | 30.0% |
| ! | GATTCTACTGTTTAAAGTCT+TGG | + | chr4.1:25779311-25779330 | None:intergenic | 30.0% |
| ! | GATTGTAGATTTTCTTGGAA+AGG | - | chr4.1:25780601-25780620 | MS.gene006743:CDS | 30.0% |
| ! | TACCTCCATTTTCATATTGT+TGG | + | chr4.1:25778796-25778815 | None:intergenic | 30.0% |
| ! | TTTCTTCTTCTTTCTGGTAT+TGG | + | chr4.1:25779272-25779291 | None:intergenic | 30.0% |
| !! | AAAATTGACTTGCAAGGTAA+GGG | + | chr4.1:25777677-25777696 | None:intergenic | 30.0% |
| !! | AAAGTGATTGTTCTAGAGAA+AGG | - | chr4.1:25778719-25778738 | MS.gene006743:CDS | 30.0% |
| !! | CACTATTTCTATGTTGAACT+TGG | + | chr4.1:25777828-25777847 | None:intergenic | 30.0% |
| !! | CCATATAAAATTGACTTGCA+AGG | + | chr4.1:25777683-25777702 | None:intergenic | 30.0% |
| !! | TAAAATTGACTTGCAAGGTA+AGG | + | chr4.1:25777678-25777697 | None:intergenic | 30.0% |
| !! | TCTATAATTCCCTTTTCAAG+GGG | + | chr4.1:25778530-25778549 | None:intergenic | 30.0% |
| !!! | TGAGATCTGATTTTGATTCT+GGG | + | chr4.1:25779483-25779502 | None:intergenic | 30.0% |
| !!! | TTGAGATCTGATTTTGATTC+TGG | + | chr4.1:25779484-25779503 | None:intergenic | 30.0% |
| AAAAAGAGACCCCTTGAAAA+GGG | - | chr4.1:25778518-25778537 | MS.gene006743:CDS | 35.0% | |
| AAAGAGAAAAGATTGTGCAG+AGG | - | chr4.1:25778214-25778233 | MS.gene006743:CDS | 35.0% | |
| AAATGTGATGCAGTAGTTGT+TGG | - | chr4.1:25778644-25778663 | MS.gene006743:CDS | 35.0% | |
| AACTTTAAACTTTCAGGCTC+TGG | + | chr4.1:25777481-25777500 | None:intergenic | 35.0% | |
| AAGAGAAAAGATTGTGCAGA+GGG | - | chr4.1:25778215-25778234 | MS.gene006743:CDS | 35.0% | |
| AAGTGGACAAGTAAAAACTG+AGG | - | chr4.1:25780160-25780179 | MS.gene006743:intron | 35.0% | |
| AGTGGACAAGTAAAAACTGA+GGG | - | chr4.1:25780161-25780180 | MS.gene006743:intron | 35.0% | |
| ATACTTCTGCTCATCAAATG+GGG | - | chr4.1:25780414-25780433 | MS.gene006743:CDS | 35.0% | |
| ATCTTGTCTGTCTTAGACTA+GGG | - | chr4.1:25777571-25777590 | MS.gene006743:intron | 35.0% | |
| ATGGCTTATATCAACAAGGT+TGG | - | chr4.1:25778110-25778129 | MS.gene006743:CDS | 35.0% | |
| CAACTTTATATTGGTACGAG+TGG | + | chr4.1:25779703-25779722 | None:intergenic | 35.0% | |
| CACAATGAAGCTACAAATTG+AGG | - | chr4.1:25779330-25779349 | MS.gene006743:intron | 35.0% | |
| CACTCGTACCAATATAAAGT+TGG | - | chr4.1:25779701-25779720 | MS.gene006743:intron | 35.0% | |
| CAGAAATGTTGAAGAAAGAC+TGG | + | chr4.1:25776849-25776868 | None:intergenic | 35.0% | |
| CTAGTTACATGTTTGGTACA+CGG | - | chr4.1:25779782-25779801 | MS.gene006743:intron | 35.0% | |
| CTTGAGAAGTTGTGGATAAA+TGG | + | chr4.1:25778180-25778199 | None:intergenic | 35.0% | |
| CTTGTAGATGCTGTTGAAAA+AGG | - | chr4.1:25779184-25779203 | MS.gene006743:CDS | 35.0% | |
| GACCAACAATATGAAAATGG+AGG | - | chr4.1:25778791-25778810 | MS.gene006743:CDS | 35.0% | |
| GAGGATAGCAAATACAAACA+TGG | - | chr4.1:25776700-25776719 | MS.gene006743:CDS | 35.0% | |
| GATAGTGTTTATCCAATGGA+AGG | - | chr4.1:25780359-25780378 | MS.gene006743:intron | 35.0% | |
| GTATACTTCTGCTCATCAAA+TGG | - | chr4.1:25780412-25780431 | MS.gene006743:intron | 35.0% | |
| GTCACAGGTAAAATCTATGA+GGG | - | chr4.1:25779933-25779952 | MS.gene006743:intron | 35.0% | |
| TACAAATTCCAATTCTCACC+TGG | + | chr4.1:25780395-25780414 | None:intergenic | 35.0% | |
| TAGAATGGGAGTGAATGAAA+AGG | - | chr4.1:25780442-25780461 | MS.gene006743:CDS | 35.0% | |
| TATCTTGTCTGTCTTAGACT+AGG | - | chr4.1:25777570-25777589 | MS.gene006743:intron | 35.0% | |
| TATTGTGGTTCATGTGGTTA+TGG | - | chr4.1:25779121-25779140 | MS.gene006743:CDS | 35.0% | |
| TCAATATATCCATGGGAATC+AGG | - | chr4.1:25780065-25780084 | MS.gene006743:intron | 35.0% | |
| TCATATTGTTGGTCCATTGA+AGG | + | chr4.1:25778785-25778804 | None:intergenic | 35.0% | |
| TCTAAATGTTCAATGCCAAC+AGG | - | chr4.1:25778026-25778045 | MS.gene006743:CDS | 35.0% | |
| TGATGAAAATGGTGAGAGTT+GGG | - | chr4.1:25780475-25780494 | MS.gene006743:CDS | 35.0% | |
| TGCTCTGTCTTAGTAAGAAA+TGG | - | chr4.1:25778154-25778173 | MS.gene006743:CDS | 35.0% | |
| TGGATCTCTTAAACAAGTCT+CGG | + | chr4.1:25779671-25779690 | None:intergenic | 35.0% | |
| TGGCTTATATCAACAAGGTT+GGG | - | chr4.1:25778111-25778130 | MS.gene006743:CDS | 35.0% | |
| TGTCACAGGTAAAATCTATG+AGG | - | chr4.1:25779932-25779951 | MS.gene006743:intron | 35.0% | |
| TTGATGAAAATGGTGAGAGT+TGG | - | chr4.1:25780474-25780493 | MS.gene006743:CDS | 35.0% | |
| TTTGTCATCCATTGTTGAGT+GGG | - | chr4.1:25776671-25776690 | MS.gene006743:CDS | 35.0% | |
| ! | AGAAGAAAACAAAGAGGCAT+AGG | + | chr4.1:25778296-25778315 | None:intergenic | 35.0% |
| ! | CATAGAGTATCTATCTGCTA+TGG | - | chr4.1:25778964-25778983 | MS.gene006743:intron | 35.0% |
| ! | CATTCTTTCAACACCTTTTC+TGG | + | chr4.1:25778911-25778930 | None:intergenic | 35.0% |
| ! | CATTTTCCTATTAGTCGAGT+TGG | + | chr4.1:25777101-25777120 | None:intergenic | 35.0% |
| ! | GTGATTAAATGTGCTGTTCT+TGG | + | chr4.1:25780122-25780141 | None:intergenic | 35.0% |
| ! | TATGACAGAGATTAGTCATC+CGG | + | chr4.1:25779586-25779605 | None:intergenic | 35.0% |
| ! | TTAACAATTTTGGACAGGAG+GGG | - | chr4.1:25777792-25777811 | MS.gene006743:intron | 35.0% |
| !! | AAAAAGTTGGTGACCCTAAA+CGG | + | chr4.1:25777752-25777771 | None:intergenic | 35.0% |
| !! | AATGATGATGGTCCTAGTAA+TGG | + | chr4.1:25780041-25780060 | None:intergenic | 35.0% |
| !! | AGAAAAGGGTGTCAAAATCT+TGG | - | chr4.1:25779055-25779074 | MS.gene006743:CDS | 35.0% |
| !! | CAGAAAAGGTGTTGAAAGAA+TGG | - | chr4.1:25778909-25778928 | MS.gene006743:intron | 35.0% |
| !! | CTGCATCACATTTGATTTTG+AGG | + | chr4.1:25778637-25778656 | None:intergenic | 35.0% |
| !! | TCTCTAGAACAATCACTTTG+TGG | + | chr4.1:25778718-25778737 | None:intergenic | 35.0% |
| !! | TTTCTAAGAGCATCATCCAT+TGG | + | chr4.1:25776787-25776806 | None:intergenic | 35.0% |
| !!! | ATTTTTGCTGGTTCAACAGT+AGG | - | chr4.1:25778845-25778864 | MS.gene006743:CDS | 35.0% |
| !!! | CCTCTTTGTTTTCTTCTCTT+GGG | - | chr4.1:25778299-25778318 | MS.gene006743:CDS | 35.0% |
| !!! | TGCTTGTGTTTTTAGGAAAG+AGG | - | chr4.1:25777508-25777527 | MS.gene006743:intron | 35.0% |
| AAAATGGTGATAATCCGGCA+TGG | - | chr4.1:25778441-25778460 | MS.gene006743:CDS | 40.0% | |
| AAAGTGACAATTTCTGCAGG+TGG | - | chr4.1:25779355-25779374 | MS.gene006743:intron | 40.0% | |
| AACAAGGGACTCAAGTTACA+TGG | - | chr4.1:25779161-25779180 | MS.gene006743:CDS | 40.0% | |
| AAGACAAGCTTGAGAAGTTG+TGG | + | chr4.1:25778188-25778207 | None:intergenic | 40.0% | |
| AAGTGACAATTTCTGCAGGT+GGG | - | chr4.1:25779356-25779375 | MS.gene006743:intron | 40.0% | |
| ACAGGTAAAATCTATGAGGG+AGG | - | chr4.1:25779936-25779955 | MS.gene006743:intron | 40.0% | |
| AGTTGTGTCATGTTCATGCA+TGG | + | chr4.1:25778555-25778574 | None:intergenic | 40.0% | |
| ATCACTAGAAGGTCCTTCAA+TGG | - | chr4.1:25778769-25778788 | MS.gene006743:CDS | 40.0% | |
| ATGGGAGTGAATGAAAAGGA+AGG | - | chr4.1:25780446-25780465 | MS.gene006743:CDS | 40.0% | |
| ATGTGCCAAGAAATTCACCA+GGG | - | chr4.1:25779092-25779111 | MS.gene006743:CDS | 40.0% | |
| ATGTTTGGTACACGGTGTAT+TGG | - | chr4.1:25779790-25779809 | MS.gene006743:intron | 40.0% | |
| CAAAAAGAGACCCCTTGAAA+AGG | - | chr4.1:25778517-25778536 | MS.gene006743:CDS | 40.0% | |
| CAAATGGGGAGTTGTAGAAT+GGG | - | chr4.1:25780428-25780447 | MS.gene006743:CDS | 40.0% | |
| CAACTTCTCAAGCTTGTCTT+TGG | - | chr4.1:25778188-25778207 | MS.gene006743:CDS | 40.0% | |
| CATCCTGTACTAATGACATG+GGG | - | chr4.1:25779451-25779470 | MS.gene006743:intron | 40.0% | |
| CCACCATTAATGATCTCTAG+TGG | - | chr4.1:25779391-25779410 | MS.gene006743:intron | 40.0% | |
| CCACTAGAGATCATTAATGG+TGG | + | chr4.1:25779394-25779413 | None:intergenic | 40.0% | |
| CCATCCTGTACTAATGACAT+GGG | - | chr4.1:25779450-25779469 | MS.gene006743:intron | 40.0% | |
| CCCAAGAGAAGAAAACAAAG+AGG | + | chr4.1:25778302-25778321 | None:intergenic | 40.0% | |
| CGTAGCAGTTTCTTGCATTT+AGG | + | chr4.1:25776981-25777000 | None:intergenic | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | + | chr4.1:25777222-25777241 | None:intergenic | 40.0% | |
| CTGAGAATTCTAATAGCAGC+AGG | - | chr4.1:25780248-25780267 | MS.gene006743:intron | 40.0% | |
| GAACCACAATAATGATTCCC+TGG | + | chr4.1:25779112-25779131 | None:intergenic | 40.0% | |
| GAGTGATATTTGAGAGTGAG+GGG | - | chr4.1:25779812-25779831 | MS.gene006743:intron | 40.0% | |
| GATAGAGAGAATATGAGAGC+TGG | - | chr4.1:25780212-25780231 | MS.gene006743:intron | 40.0% | |
| GATTAGAGTCGATCCGTTTA+GGG | - | chr4.1:25777736-25777755 | MS.gene006743:intron | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | + | chr4.1:25777225-25777244 | None:intergenic | 40.0% | |
| GCTCATAGGAAAAATAGGCT+TGG | + | chr4.1:25779891-25779910 | None:intergenic | 40.0% | |
| GGAGTGATATTTGAGAGTGA+GGG | - | chr4.1:25779811-25779830 | MS.gene006743:intron | 40.0% | |
| GGATCTCTTAAACAAGTCTC+GGG | + | chr4.1:25779670-25779689 | None:intergenic | 40.0% | |
| GGCTTATATCAACAAGGTTG+GGG | - | chr4.1:25778112-25778131 | MS.gene006743:CDS | 40.0% | |
| GTCACTAACAAGCATATGTG+AGG | - | chr4.1:25776744-25776763 | MS.gene006743:CDS | 40.0% | |
| GTCCAAAAGGAGAGAAACAA+GGG | - | chr4.1:25779146-25779165 | MS.gene006743:CDS | 40.0% | |
| GTTTGATATCACGGTGAGTT+TGG | + | chr4.1:25779848-25779867 | None:intergenic | 40.0% | |
| GTTTGTCATCCATTGTTGAG+TGG | - | chr4.1:25776670-25776689 | MS.gene006743:CDS | 40.0% | |
| TAAGCGAATGCGAGTCTAAA+AGG | + | chr4.1:25778264-25778283 | None:intergenic | 40.0% | |
| TAATGAGAACACTAGCGAAC+AGG | - | chr4.1:25780319-25780338 | MS.gene006743:intron | 40.0% | |
| TATCCCCATGTCATTAGTAC+AGG | + | chr4.1:25779457-25779476 | None:intergenic | 40.0% | |
| TATGTGCCAAGAAATTCACC+AGG | - | chr4.1:25779091-25779110 | MS.gene006743:CDS | 40.0% | |
| TCAAATGGGGAGTTGTAGAA+TGG | - | chr4.1:25780427-25780446 | MS.gene006743:CDS | 40.0% | |
| TCACCAGGGAATCATTATTG+TGG | - | chr4.1:25779106-25779125 | MS.gene006743:CDS | 40.0% | |
| TCCATCCTGTACTAATGACA+TGG | - | chr4.1:25779449-25779468 | MS.gene006743:intron | 40.0% | |
| TGATTCCCTGGTGAATTTCT+TGG | + | chr4.1:25779100-25779119 | None:intergenic | 40.0% | |
| TGGAGTGATATTTGAGAGTG+AGG | - | chr4.1:25779810-25779829 | MS.gene006743:intron | 40.0% | |
| TGTCCAAAAGGAGAGAAACA+AGG | - | chr4.1:25779145-25779164 | MS.gene006743:CDS | 40.0% | |
| TGTGGCTGAAAAATAGGAAG+TGG | + | chr4.1:25777199-25777218 | None:intergenic | 40.0% | |
| TGTGGTTATGGTTGTCCAAA+AGG | - | chr4.1:25779133-25779152 | MS.gene006743:CDS | 40.0% | |
| TGTTGATACCTCATATCCGA+TGG | + | chr4.1:25778471-25778490 | None:intergenic | 40.0% | |
| TTGAGTCAAGTGTGACATTG+AGG | + | chr4.1:25778604-25778623 | None:intergenic | 40.0% | |
| TTGTCATCCATTGTTGAGTG+GGG | - | chr4.1:25776672-25776691 | MS.gene006743:CDS | 40.0% | |
| ! | ACCTGCAGAAATTGTCACTT+TGG | + | chr4.1:25779356-25779375 | None:intergenic | 40.0% |
| ! | ATGAGAGCTGGTTTACAACA+AGG | - | chr4.1:25780224-25780243 | MS.gene006743:intron | 40.0% |
| ! | GAAGAAATGTTTGGGAGTGT+TGG | - | chr4.1:25779285-25779304 | MS.gene006743:intron | 40.0% |
| !! | AAAGGTGCTGTGATCATAAC+AGG | - | chr4.1:25779202-25779221 | MS.gene006743:CDS | 40.0% |
| !! | ACCTGACTACTCACTTTTAG+TGG | - | chr4.1:25779608-25779627 | MS.gene006743:intron | 40.0% |
| !! | CCTGACTACTCACTTTTAGT+GGG | - | chr4.1:25779609-25779628 | MS.gene006743:intron | 40.0% |
| !! | CTTTTCAAGGGGTCTCTTTT+TGG | + | chr4.1:25778519-25778538 | None:intergenic | 40.0% |
| !! | GAAGGTGCTGTTGATGAAAA+TGG | - | chr4.1:25780464-25780483 | MS.gene006743:CDS | 40.0% |
| !! | TTGGGGACTTTGTTGATTTG+TGG | - | chr4.1:25778129-25778148 | MS.gene006743:CDS | 40.0% |
| !!! | GCCTCTTTGTTTTCTTCTCT+TGG | - | chr4.1:25778298-25778317 | MS.gene006743:CDS | 40.0% |
| AAACTGCTACGATGTGCAAG+TGG | - | chr4.1:25776990-25777009 | MS.gene006743:CDS | 45.0% | |
| AACTGCTACGATGTGCAAGT+GGG | - | chr4.1:25776991-25777010 | MS.gene006743:CDS | 45.0% | |
| AAGTCAAGTCCTGATTCCCA+TGG | + | chr4.1:25780077-25780096 | None:intergenic | 45.0% | |
| ACCCACAATTAGGTTCCATG+TGG | - | chr4.1:25777018-25777037 | MS.gene006743:CDS | 45.0% | |
| ACTCACGTATATACCTCGTC+AGG | + | chr4.1:25776889-25776908 | None:intergenic | 45.0% | |
| AGCCACATGGAACCTAATTG+TGG | + | chr4.1:25777023-25777042 | None:intergenic | 45.0% | |
| AGTGACAATTTCTGCAGGTG+GGG | - | chr4.1:25779357-25779376 | MS.gene006743:intron | 45.0% | |
| ATGCGAGTCTAAAAGGAGTG+AGG | + | chr4.1:25778257-25778276 | None:intergenic | 45.0% | |
| ATGGAAAGCCATCGGATATG+AGG | - | chr4.1:25778460-25778479 | MS.gene006743:CDS | 45.0% | |
| CATTGTCACCAGGTGAGAAT+TGG | - | chr4.1:25780384-25780403 | MS.gene006743:intron | 45.0% | |
| CCCACTAAAAGTGAGTAGTC+AGG | + | chr4.1:25779612-25779631 | None:intergenic | 45.0% | |
| CCCATGTCATTAGTACAGGA+TGG | + | chr4.1:25779453-25779472 | None:intergenic | 45.0% | |
| CTAACATCTCAGCAACCTGT+TGG | + | chr4.1:25778044-25778063 | None:intergenic | 45.0% | |
| CTATGGAAACTGTGTGTGAG+AGG | - | chr4.1:25778981-25779000 | MS.gene006743:intron | 45.0% | |
| CTCACGTATATACCTCGTCA+GGG | + | chr4.1:25776888-25776907 | None:intergenic | 45.0% | |
| CTTTGTGGCCTGCATTTGAA+AGG | + | chr4.1:25778703-25778722 | None:intergenic | 45.0% | |
| GAAACTGTGTGTGAGAGGAT+TGG | - | chr4.1:25778986-25779005 | MS.gene006743:intron | 45.0% | |
| GCATCATCCATTGGCAATGA+AGG | + | chr4.1:25776778-25776797 | None:intergenic | 45.0% | |
| GCCAAAGTGACAATTTCTGC+AGG | - | chr4.1:25779352-25779371 | MS.gene006743:intron | 45.0% | |
| GCCACATGGAACCTAATTGT+GGG | + | chr4.1:25777022-25777041 | None:intergenic | 45.0% | |
| GCTGAGATGTTAGTGAAGAG+TGG | - | chr4.1:25778051-25778070 | MS.gene006743:CDS | 45.0% | |
| GCTTCTGTCCTTTCAAATGC+AGG | - | chr4.1:25778692-25778711 | MS.gene006743:CDS | 45.0% | |
| GGATTAGAGTCGATCCGTTT+AGG | - | chr4.1:25777735-25777754 | MS.gene006743:intron | 45.0% | |
| GGCAAATAGTGCGTTGTGAT+TGG | - | chr4.1:25777233-25777252 | MS.gene006743:CDS | 45.0% | |
| GGTACGAGTGGAAATGAACT+TGG | + | chr4.1:25779691-25779710 | None:intergenic | 45.0% | |
| GTAGGAACACACAGAAGTGA+TGG | - | chr4.1:25780281-25780300 | MS.gene006743:intron | 45.0% | |
| GTATATACCTCGTCAGGGAT+TGG | + | chr4.1:25776883-25776902 | None:intergenic | 45.0% | |
| GTGGTGGTTCAGCTGTTAAT+TGG | - | chr4.1:25778867-25778886 | MS.gene006743:intron | 45.0% | |
| TACGCACCAACTCGACTAAT+AGG | - | chr4.1:25777092-25777111 | MS.gene006743:CDS | 45.0% | |
| TATGTATCCAATCCCTGACG+AGG | - | chr4.1:25776873-25776892 | MS.gene006743:CDS | 45.0% | |
| TGTGTTGCCTTCATTGCCAA+TGG | - | chr4.1:25776768-25776787 | MS.gene006743:CDS | 45.0% | |
| ! | AGGAGGTGTGGCTGAAAAAT+AGG | + | chr4.1:25777205-25777224 | None:intergenic | 45.0% |
| ! | GGTGTTGAAAGAATGGTCAG+AGG | - | chr4.1:25778916-25778935 | MS.gene006743:intron | 45.0% |
| !! | GATGCAGTAGTTGTTGGTTC+TGG | - | chr4.1:25778650-25778669 | MS.gene006743:CDS | 45.0% |
| !! | GTCCCTTGTTTCTCTCCTTT+TGG | + | chr4.1:25779151-25779170 | None:intergenic | 45.0% |
| !! | TTTGCTGGTTCAACAGTAGG+TGG | - | chr4.1:25778848-25778867 | MS.gene006743:CDS | 45.0% |
| !!! | GGGTCTCTTTTTGGTGTCAT+TGG | + | chr4.1:25778510-25778529 | None:intergenic | 45.0% |
| !!! | TTTAATTTTTATAATCATAT+TGG | + | chr4.1:25777405-25777424 | None:intergenic | 5.0% |
| AATCCGGCATGGAAAGCCAT+CGG | - | chr4.1:25778452-25778471 | MS.gene006743:CDS | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | - | chr4.1:25777212-25777231 | MS.gene006743:CDS | 50.0% | |
| AGTGTGCTTCCAACTGCTGT+TGG | - | chr4.1:25780527-25780546 | MS.gene006743:CDS | 50.0% | |
| ATGTGGCTGCGTTGTGCATT+CGG | - | chr4.1:25777035-25777054 | MS.gene006743:CDS | 50.0% | |
| ATTGTTGAGTGGGGTGAGAG+AGG | - | chr4.1:25776681-25776700 | MS.gene006743:CDS | 50.0% | |
| CTTGTGAATGGTGGTTGGGA+GGG | + | chr4.1:25779640-25779659 | None:intergenic | 50.0% | |
| GGGTTAACACCAACAGCAGT+TGG | + | chr4.1:25780539-25780558 | None:intergenic | 50.0% | |
| GGTGACAATGCTCCTTCCAT+TGG | + | chr4.1:25780374-25780393 | None:intergenic | 50.0% | |
| GTGAGAGTTGGGAAGCTGAA+GGG | - | chr4.1:25780486-25780505 | MS.gene006743:CDS | 50.0% | |
| TATCCGATGGCTTTCCATGC+CGG | + | chr4.1:25778458-25778477 | None:intergenic | 50.0% | |
| TCTCTCACCCCACTCAACAA+TGG | + | chr4.1:25776682-25776701 | None:intergenic | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | + | chr4.1:25777217-25777236 | None:intergenic | 50.0% | |
| ! | CGTTGTGCATTCGGTGAAGT+TGG | - | chr4.1:25777044-25777063 | MS.gene006743:CDS | 50.0% |
| ! | GAGCCTTGTGAATGGTGGTT+GGG | + | chr4.1:25779644-25779663 | None:intergenic | 50.0% |
| ! | GGTTTGAGCCTTGTGAATGG+TGG | + | chr4.1:25779649-25779668 | None:intergenic | 50.0% |
| ! | TCGGGTTTGAGCCTTGTGAA+TGG | + | chr4.1:25779652-25779671 | None:intergenic | 50.0% |
| ! | TGAGCCTTGTGAATGGTGGT+TGG | + | chr4.1:25779645-25779664 | None:intergenic | 50.0% |
| !! | ATGGAAGGAGCATTGTCACC+AGG | - | chr4.1:25780374-25780393 | MS.gene006743:intron | 50.0% |
| !! | GTAGTTGTTGGTTCTGGCTG+TGG | - | chr4.1:25778656-25778675 | MS.gene006743:CDS | 50.0% |
| AGTGGGTGGGACCCACAATT+AGG | - | chr4.1:25777008-25777027 | MS.gene006743:CDS | 55.0% | |
| CCTCCCAACCACCATTCACA+AGG | - | chr4.1:25779638-25779657 | MS.gene006743:intron | 55.0% | |
| CCTTGTGAATGGTGGTTGGG+AGG | + | chr4.1:25779641-25779660 | None:intergenic | 55.0% | |
| CGAAATGGCACGTTGCAGCA+AGG | + | chr4.1:25778343-25778362 | None:intergenic | 55.0% | |
| GAATGCACAACGCAGCCACA+TGG | + | chr4.1:25777036-25777055 | None:intergenic | 55.0% | |
| GCAGCAGGAGCTGTTGAAGT+AGG | - | chr4.1:25780263-25780282 | MS.gene006743:intron | 55.0% | |
| GCTACGATGTGCAAGTGGGT+GGG | - | chr4.1:25776995-25777014 | MS.gene006743:CDS | 55.0% | |
| GGTGAGAGTTGGGAAGCTGA+AGG | - | chr4.1:25780485-25780504 | MS.gene006743:CDS | 55.0% | |
| TGCAGAGGGCTCTCAAGCTT+AGG | - | chr4.1:25778229-25778248 | MS.gene006743:CDS | 55.0% | |
| TGCTACGATGTGCAAGTGGG+TGG | - | chr4.1:25776994-25777013 | MS.gene006743:CDS | 55.0% | |
| ! | GCTGGTTCAACAGTAGGTGG+TGG | - | chr4.1:25778851-25778870 | MS.gene006743:CDS | 55.0% |
| !! | GTTGTTGGTTCTGGCTGTGG+AGG | - | chr4.1:25778659-25778678 | MS.gene006743:CDS | 55.0% |
| !! | GTTGGTTCTGGCTGTGGAGG+AGG | - | chr4.1:25778662-25778681 | MS.gene006743:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 25776661 | 25780646 | 25776661 | ID=MS.gene006743 |
| chr4.1 | mRNA | 25776661 | 25780646 | 25776661 | ID=MS.gene006743.t1;Parent=MS.gene006743 |
| chr4.1 | exon | 25780413 | 25780646 | 25780413 | ID=MS.gene006743.t1.exon1;Parent=MS.gene006743.t1 |
| chr4.1 | CDS | 25780413 | 25780646 | 25780413 | ID=cds.MS.gene006743.t1;Parent=MS.gene006743.t1 |
| chr4.1 | exon | 25778987 | 25779259 | 25778987 | ID=MS.gene006743.t1.exon2;Parent=MS.gene006743.t1 |
| chr4.1 | CDS | 25778987 | 25779259 | 25778987 | ID=cds.MS.gene006743.t1;Parent=MS.gene006743.t1 |
| chr4.1 | exon | 25777802 | 25778873 | 25777802 | ID=MS.gene006743.t1.exon3;Parent=MS.gene006743.t1 |
| chr4.1 | CDS | 25777802 | 25778873 | 25777802 | ID=cds.MS.gene006743.t1;Parent=MS.gene006743.t1 |
| chr4.1 | exon | 25776661 | 25777367 | 25776661 | ID=MS.gene006743.t1.exon4;Parent=MS.gene006743.t1 |
| chr4.1 | CDS | 25776661 | 25777367 | 25776661 | ID=cds.MS.gene006743.t1;Parent=MS.gene006743.t1 |
| Gene Sequence |
| Protein sequence |
