AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene82943

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82943.t1 MTR_8g072210 94.492 817 35 3 1 814 1 810 0.0 1525
MS.gene82943.t1 MTR_5g025650 73.317 817 197 7 6 814 26 829 0.0 1202
MS.gene82943.t1 MTR_4g080890 43.005 772 381 14 64 814 19 752 0.0 580
MS.gene82943.t1 MTR_4g080823 41.729 798 392 15 48 812 2 759 0.0 577
MS.gene82943.t1 MTR_7g097210 42.384 755 380 12 71 813 26 737 0.0 550
MS.gene82943.t1 MTR_0651s0010 42.795 687 326 13 50 718 14 651 7.00e-166 496
MS.gene82943.t1 MTR_7g097210 45.922 564 281 8 257 813 21 567 1.56e-154 463
MS.gene82943.t1 MTR_1g075650 41.167 617 275 13 204 813 3 538 4.36e-151 453
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene82943.t1 AT4G19380 59.091 770 291 7 49 814 19 768 0.0 886
MS.gene82943.t1 AT4G19380 60.054 746 275 6 72 814 1 726 0.0 872
MS.gene82943.t1 AT3G23410 41.524 761 377 14 71 806 19 736 3.78e-180 536
MS.gene82943.t1 AT4G28570 38.918 776 414 13 54 813 14 745 7.11e-176 525
MS.gene82943.t1 AT4G28570 38.918 776 414 13 54 813 14 745 7.11e-176 525
MS.gene82943.t1 AT1G03990 38.243 774 411 15 65 814 26 756 2.17e-172 516
MS.gene82943.t1 AT3G23410 43.208 692 335 13 130 806 20 668 3.45e-172 513

Find 211 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTTGAAGGTTGCAAATT+TGG 0.206653 8.1:-33303058 MS.gene82943:intron
TCTACTATTGCTTTCTCTAT+TGG 0.209299 8.1:+33304415 None:intergenic
GCAGCTGGAGCTGAAGAAAT+TGG 0.214075 8.1:-33298925 MS.gene82943:CDS
TGAGGATAGCTAAGGATAAA+TGG 0.214655 8.1:+33302919 None:intergenic
GAGGAGGGTAAGAAGCTTTA+TGG 0.231338 8.1:+33302816 None:intergenic
TCGGATTCTCTAAGACAATT+TGG 0.244555 8.1:-33300200 MS.gene82943:CDS
CTTTCATCTCATAGCTTATA+CGG 0.251078 8.1:+33299004 None:intergenic
CACCTTCTTCGCCCGAGTTC+TGG 0.256015 8.1:-33299275 MS.gene82943:CDS
GGTTATTGAAGTTGACATTA+TGG 0.266308 8.1:-33303005 MS.gene82943:CDS
AGCAACATTGTTGTCTTTGA+TGG 0.269789 8.1:+33304172 None:intergenic
GGATGCTGTGTGTGAGAAAA+TGG 0.272728 8.1:-33299769 MS.gene82943:CDS
AATTGGGACACATAATAATA+AGG 0.279145 8.1:-33298908 MS.gene82943:CDS
ATGTTCTTGAAGTTCTTAAA+AGG 0.282909 8.1:-33298603 MS.gene82943:CDS
AACAATAGTCCTACACGTTC+AGG 0.309326 8.1:+33304098 None:intergenic
ATAGTAGAAGTGGTAGTTTC+AGG 0.309691 8.1:-33304400 MS.gene82943:CDS
AGTGTATTTCCCACAGCTTT+AGG 0.320302 8.1:-33298676 MS.gene82943:CDS
TGAAAAGGTGCTGAGAATTC+TGG 0.330361 8.1:-33298950 MS.gene82943:CDS
GATGCAGTGGTTGTTGGTTC+TGG 0.333465 8.1:-33300104 MS.gene82943:CDS
GAATTTGACAAAACTGGATA+TGG 0.347478 8.1:-33299189 MS.gene82943:CDS
TACTGTGGTTGGTGTTGCTT+GGG 0.347561 8.1:-33299633 MS.gene82943:CDS
GTTCTAATGCCGTGGAGTTC+CGG 0.362153 8.1:-33299123 MS.gene82943:CDS
GTTGCGGAATTTGACAAAAC+TGG 0.364771 8.1:-33299195 MS.gene82943:CDS
TCGGGCGAAGAAGGTGCATC+TGG 0.371436 8.1:+33299282 None:intergenic
AAGAAAAGGGTGTCAAGAAA+TGG 0.372300 8.1:-33299700 MS.gene82943:CDS
TCATCCAGTGACAATGGCTT+GGG 0.373004 8.1:-33299313 MS.gene82943:CDS
GAATCCAATGGTCACTGTTC+AGG 0.375492 8.1:-33298650 MS.gene82943:CDS
CACTCCTTGCATACATGGTT+AGG 0.383867 8.1:+33299846 None:intergenic
TGGTTATAAGGTGTTGGTAT+TGG 0.386603 8.1:-33300042 MS.gene82943:CDS
GGTAGTTTCAGGTTGGGGTT+GGG 0.388333 8.1:-33304389 MS.gene82943:CDS
AGAAAAGGGTGTCAAGAAAT+GGG 0.388619 8.1:-33299699 MS.gene82943:CDS
CTCAGGAGGTGGCGTGGTAG+CGG 0.392160 8.1:-33300081 MS.gene82943:CDS
GGGAAGGAGCTTAAATGTTA+AGG 0.395009 8.1:-33298887 MS.gene82943:CDS
TCAGGAGGTGGCGTGGTAGC+GGG 0.397109 8.1:-33300080 MS.gene82943:CDS
ATGTCCCTCCGGCCAGAACT+CGG 0.399598 8.1:+33299263 None:intergenic
CTACTGTGGTTGGTGTTGCT+TGG 0.402290 8.1:-33299634 MS.gene82943:CDS
AGAGATAGAAAGATAGCAAA+AGG 0.410434 8.1:-33299486 MS.gene82943:CDS
AACAATCTTTCCCTTCTTGA+AGG 0.413844 8.1:-33299996 MS.gene82943:CDS
GTGGTTGTTGGTTCTGGCTC+AGG 0.414475 8.1:-33300098 MS.gene82943:CDS
CATTATGGCTACTATCTACA+TGG 0.415165 8.1:-33302990 MS.gene82943:CDS
TTGAAGTTCTTAAAAGGAAA+AGG 0.415643 8.1:-33298597 MS.gene82943:CDS
GGAAGTAGAGGGTCTTTATC+TGG 0.416143 8.1:-33298707 MS.gene82943:CDS
CTGAGAATTCTGGCAGCAGC+TGG 0.418540 8.1:-33298940 MS.gene82943:CDS
AGAAGTGGTAGTTTCAGGTT+GGG 0.418547 8.1:-33304395 MS.gene82943:CDS
CTTCCTCTTCAAACTCAGAT+TGG 0.418825 8.1:+33299742 None:intergenic
CGCACCACTCCTTGCATACA+TGG 0.419226 8.1:+33299841 None:intergenic
AGAAACATGGCTTGTGGACT+TGG 0.419946 8.1:-33299580 MS.gene82943:CDS
CAATGTGATGCAGTGGTTGT+TGG 0.422728 8.1:-33300110 MS.gene82943:CDS
TATCCAATTGCCTTCCATGA+TGG 0.425514 8.1:+33300389 None:intergenic
AATAATGCAATACTAAGAAA+AGG 0.426947 8.1:-33299714 MS.gene82943:CDS
AACCCATCATGGAAGGCAAT+TGG 0.428464 8.1:-33300392 MS.gene82943:CDS
TGGTAGTTTCAGGTTGGGGT+TGG 0.428722 8.1:-33304390 MS.gene82943:CDS
GAATCGGTTGTGAACCAAAC+GGG 0.429172 8.1:-33298739 MS.gene82943:CDS
TGGCTACTATCTACATGGTT+TGG 0.430755 8.1:-33302985 MS.gene82943:CDS
CCACCCGCGTGATATCATTT+CGG 0.432345 8.1:-33300219 MS.gene82943:CDS
ATGGTAGAAGCTTTATTCGT+TGG 0.432524 8.1:+33300155 None:intergenic
AACTAGAGAAGGAGATGAGA+TGG 0.434343 8.1:+33300136 None:intergenic
TGCGCTTTGAACTCTTGATC+AGG 0.440677 8.1:+33300359 None:intergenic
TGGCGAGGTACATTTGATCC+AGG 0.443371 8.1:+33299967 None:intergenic
TGGAAGGCAATTGGATATAG+TGG 0.444983 8.1:-33300383 MS.gene82943:CDS
TAGAAGTGGTAGTTTCAGGT+TGG 0.446349 8.1:-33304396 MS.gene82943:CDS
CCTTCTTGAAGGACCAACCC+TGG 0.448591 8.1:-33299985 MS.gene82943:CDS
GTTGGTTCTGGCTCAGGAGG+TGG 0.449619 8.1:-33300092 MS.gene82943:CDS
GAAGTGGTAGTTTCAGGTTG+GGG 0.454786 8.1:-33304394 MS.gene82943:CDS
GAGGATAGCTAAGGATAAAT+GGG 0.455437 8.1:+33302920 None:intergenic
CAGCTGGAGCTGAAGAAATT+GGG 0.456175 8.1:-33298924 MS.gene82943:CDS
AACTTCAATAACCATGTACT+TGG 0.457432 8.1:+33303015 None:intergenic
CTTGTGGACTTGGTGAAATC+AGG 0.457492 8.1:-33299570 MS.gene82943:CDS
GTGGAGGGTCTGCAATAAAC+TGG 0.457726 8.1:-33299887 MS.gene82943:CDS
CATACTGTTGTTGAGCTTGG+TGG 0.460496 8.1:-33304347 MS.gene82943:CDS
TTCATCCAGTGACAATGGCT+TGG 0.462973 8.1:-33299314 MS.gene82943:CDS
ATCCAATTGCCTTCCATGAT+GGG 0.464391 8.1:+33300390 None:intergenic
CTACCGTACTTCAGCTTCCA+TGG 0.465884 8.1:-33304129 MS.gene82943:CDS
ACTCCTTGCATACATGGTTA+GGG 0.466919 8.1:+33299847 None:intergenic
ATTGGGACACATAATAATAA+GGG 0.471711 8.1:-33298907 MS.gene82943:CDS
AAGGTGTTGGTATTGGAGAA+AGG 0.473055 8.1:-33300035 MS.gene82943:CDS
TTCTTCGCCCGAGTTCTGGC+CGG 0.477493 8.1:-33299271 MS.gene82943:CDS
GGCCAGAACTCGGGCGAAGA+AGG 0.482002 8.1:+33299273 None:intergenic
CTGGATGCAATGAAGGTGTT+TGG 0.484294 8.1:+33299157 None:intergenic
TTTGCACTGGCAAGGGATCA+AGG 0.487949 8.1:-33299051 MS.gene82943:CDS
GTAGAAGCTTTATTCGTTGG+AGG 0.491315 8.1:+33300158 None:intergenic
TAGCCCCAAGCCATTGTCAC+TGG 0.491774 8.1:+33299309 None:intergenic
CAATCTGAGTTTGAAGAGGA+AGG 0.499308 8.1:-33299741 MS.gene82943:CDS
TGATCTGGTGGAGCATTCCT+AGG 0.500404 8.1:+33299657 None:intergenic
CGTACTTCAGCTTCCATGGC+TGG 0.500563 8.1:-33304125 MS.gene82943:CDS
ATACTGTTGTTGAGCTTGGT+GGG 0.500801 8.1:-33304346 MS.gene82943:CDS
TTTACACAAAGGAATTGAAA+AGG 0.502716 8.1:-33298965 MS.gene82943:CDS
ACTAGTGATTTCATTTGTCT+AGG 0.502970 8.1:+33304221 None:intergenic
GGGTACTAATCTGAAGGAAT+CGG 0.503417 8.1:-33298755 MS.gene82943:CDS
TCAGATGGGGAGCTGTCGTA+TGG 0.503781 8.1:-33298776 MS.gene82943:CDS
CTCATGTATTTGCACTGGCA+AGG 0.504199 8.1:-33299059 MS.gene82943:CDS
AGTATGCTCGGCACATCAGA+TGG 0.504269 8.1:-33298791 MS.gene82943:CDS
CACCAACCACAGTAGTGATC+TGG 0.504753 8.1:+33299642 None:intergenic
CTGGCAAGGGATCAAGGATC+AGG 0.506455 8.1:-33299045 MS.gene82943:CDS
AGAGAAAGCAATAGTAGAAG+TGG 0.506559 8.1:-33304410 MS.gene82943:CDS
GTTGGAGGAGTGACCGAGAC+AGG 0.508311 8.1:+33300173 None:intergenic
TTACATAAAACATCCAAAGA+TGG 0.509830 8.1:-33300320 MS.gene82943:CDS
TTCGCCCGAGTTCTGGCCGG+AGG 0.510863 8.1:-33299268 MS.gene82943:CDS
ATTAGAACTGAGAATAAGCC+TGG 0.512540 8.1:+33299138 None:intergenic
GAAAGAGAGTTTCTAAGAGG+TGG 0.517417 8.1:+33304245 None:intergenic
ACAGGCTACAATTGTGACCT+TGG 0.521919 8.1:+33299410 None:intergenic
GTTCATACTGTTGTTGAGCT+TGG 0.522586 8.1:-33304350 MS.gene82943:CDS
ATAATGCAATACTAAGAAAA+GGG 0.523685 8.1:-33299713 MS.gene82943:CDS
TTGGTGTTGCTTGGGATGCA+AGG 0.525017 8.1:-33299625 MS.gene82943:CDS
TGTCCCTCCGGCCAGAACTC+GGG 0.526499 8.1:+33299264 None:intergenic
GCAGGATCCACCGTTGGTGG+AGG 0.528745 8.1:-33299903 MS.gene82943:CDS
ATCCTGTCAGTAACATTCCT+AGG 0.531208 8.1:-33299674 MS.gene82943:CDS
CCTCCTCGTCTTCTTTACTC+AGG 0.531374 8.1:-33302800 MS.gene82943:intron
ATCGGTTGCAATCAAACCAT+TGG 0.533167 8.1:+33299947 None:intergenic
ACATTGTTGTCTTTGATGGA+AGG 0.533660 8.1:+33304176 None:intergenic
TTCCTAGGAATGTTACTGAC+AGG 0.535737 8.1:+33299672 None:intergenic
TTTCATCTCATAGCTTATAC+GGG 0.535836 8.1:+33299005 None:intergenic
ACAATAGTCCTACACGTTCA+GGG 0.537506 8.1:+33304099 None:intergenic
ACGTTCAGGGGTGCCAGCCA+TGG 0.537591 8.1:+33304112 None:intergenic
CGGAGTGCTTAGTGCTCCAC+AGG 0.538565 8.1:+33299392 None:intergenic
CAAACACCTTCATTGCATCC+AGG 0.540232 8.1:-33299156 MS.gene82943:CDS
GTTGTTGGTTCTGGCTCAGG+AGG 0.540695 8.1:-33300095 MS.gene82943:CDS
GTTCTGAACAACATTCTAAG+AGG 0.541393 8.1:+33302838 None:intergenic
CCAGGGTTGGTCCTTCAAGA+AGG 0.541785 8.1:+33299985 None:intergenic
GTTTGAGAAATGAAAACATA+GGG 0.541786 8.1:-33299350 MS.gene82943:CDS
GATGCTGTGTGTGAGAAAAT+GGG 0.543385 8.1:-33299768 MS.gene82943:CDS
CTCCTTGCATACATGGTTAG+GGG 0.543474 8.1:+33299848 None:intergenic
CACCAGATCACTACTGTGGT+TGG 0.545600 8.1:-33299644 MS.gene82943:CDS
ATCTGATGTGCCGAGCATAC+TGG 0.545705 8.1:+33298793 None:intergenic
AATCTGAGTTTGAAGAGGAA+GGG 0.551448 8.1:-33299740 MS.gene82943:CDS
TATTCTCAGTTCTAATGCCG+TGG 0.552495 8.1:-33299131 MS.gene82943:CDS
AACTGAAACATCCAAGTACA+TGG 0.554156 8.1:-33303026 MS.gene82943:CDS
GGCGAGGTACATTTGATCCA+GGG 0.555637 8.1:+33299968 None:intergenic
CATTTGCGTGGTCGAGTCCA+AGG 0.557765 8.1:-33299427 MS.gene82943:CDS
AACAGCTCATGTATTTGCAC+TGG 0.559247 8.1:-33299064 MS.gene82943:CDS
TGTGGGAAATACACTTGTAT+CGG 0.560127 8.1:+33298684 None:intergenic
TAAACTATACAAGGAAGCAA+TGG 0.561191 8.1:-33299790 MS.gene82943:CDS
TCATGTATTTGCACTGGCAA+GGG 0.565920 8.1:-33299058 MS.gene82943:CDS
CTTATCGACACCAGTATGCT+CGG 0.566360 8.1:-33298803 MS.gene82943:CDS
CAGGATCCACCGTTGGTGGA+GGG 0.567300 8.1:-33299902 MS.gene82943:CDS
TTCTTAAAAGGAAAAGGTGA+AGG 0.568235 8.1:-33298591 None:intergenic
GTATGCTCGGCACATCAGAT+GGG 0.570276 8.1:-33298790 MS.gene82943:CDS
AATAAGCCTGGATGCAATGA+AGG 0.570558 8.1:+33299150 None:intergenic
TGAGTTTGAGAAATTTGTGA+AGG 0.570877 8.1:-33298851 MS.gene82943:CDS
ACTTGTATAGCCTCGCAACT+AGG 0.571604 8.1:+33299531 None:intergenic
CGGGCGAAGAAGGTGCATCT+GGG 0.572435 8.1:+33299283 None:intergenic
TGCAAGGATGGAAAGAAGAA+AGG 0.573723 8.1:-33299609 MS.gene82943:CDS
TGTTGCTTGGGATGCAAGGA+TGG 0.573943 8.1:-33299621 MS.gene82943:CDS
CAACAACCACTGCATCACAT+TGG 0.574100 8.1:+33300111 None:intergenic
CAGCCATGGAAGCTGAAGTA+CGG 0.578396 8.1:+33304126 None:intergenic
ATGTCCGTACTAGTACTAGC+AGG 0.580651 8.1:-33299921 MS.gene82943:CDS
GGAGAAAGAGAGTTTCTAAG+AGG 0.581405 8.1:+33304242 None:intergenic
ATAGCCTGAACAGTGACCAT+TGG 0.582109 8.1:+33298646 None:intergenic
CCGTCGTTACTCAAAAGAAG+TGG 0.584024 8.1:-33299372 MS.gene82943:CDS
GTCTTTGATGGAAGGTAACA+TGG 0.585196 8.1:+33304184 None:intergenic
AGCAATGTCTACAGTTGTTG+CGG 0.585596 8.1:-33299211 MS.gene82943:CDS
AACCCCTAACCATGTATGCA+AGG 0.586886 8.1:-33299850 MS.gene82943:CDS
ACAATTTGGATTCCCTGTCT+CGG 0.586923 8.1:-33300186 MS.gene82943:CDS
GCATCTTCATCCAGTGACAA+TGG 0.587150 8.1:-33299319 MS.gene82943:CDS
TCGTATGGGTACTAATCTGA+AGG 0.587179 8.1:-33298761 MS.gene82943:CDS
TGGATTCACACCTAAAGCTG+TGG 0.587307 8.1:+33298666 None:intergenic
GATCAAATGTACCTCGCCAA+TGG 0.588775 8.1:-33299963 MS.gene82943:CDS
CAGATGGGGAGCTGTCGTAT+GGG 0.592762 8.1:-33298775 MS.gene82943:CDS
ATCTCATAGCTTATACGGGT+AGG 0.593523 8.1:+33299009 None:intergenic
TTGACTAGGCCTTTGTAAAG+CGG 0.595553 8.1:+33300248 None:intergenic
TACATCAGAAACATGGCTTG+TGG 0.597161 8.1:-33299586 MS.gene82943:CDS
GGATCCTGCTAGTACTAGTA+CGG 0.597485 8.1:+33299917 None:intergenic
TTCTGGCTCAGGAGGTGGCG+TGG 0.597994 8.1:-33300087 MS.gene82943:CDS
TACTAGTACGGACATATCAT+CGG 0.599678 8.1:+33299929 None:intergenic
AATGCCGTGGAGTTCCGGAA+TGG 0.600005 8.1:-33299118 MS.gene82943:CDS
TATTGCAGACCCTCCACCAA+CGG 0.603102 8.1:+33299893 None:intergenic
TCGCCCGAGTTCTGGCCGGA+GGG 0.606306 8.1:-33299267 MS.gene82943:CDS
GGAATCGGTTGTGAACCAAA+CGG 0.608085 8.1:-33298740 MS.gene82943:CDS
GGTTTGAGAAATGAAAACAT+AGG 0.608300 8.1:-33299351 MS.gene82943:CDS
CAGGGTTGGTCCTTCAAGAA+GGG 0.610197 8.1:+33299986 None:intergenic
CAACCACAGTAGTGATCTGG+TGG 0.612532 8.1:+33299645 None:intergenic
ATATCCATTCCGGAACTCCA+CGG 0.612674 8.1:+33299114 None:intergenic
GGGGAAACATGGGAAGTAGA+GGG 0.613045 8.1:-33298718 MS.gene82943:CDS
AGGTACATTTGATCCAGGGT+TGG 0.613166 8.1:+33299972 None:intergenic
TCACATTGGATAACTAGAGA+AGG 0.615554 8.1:+33300125 None:intergenic
TGCAATTCTTCCTAGTTGCG+AGG 0.617342 8.1:-33299541 MS.gene82943:CDS
CGTTTCTCTGGTGACAACTG+AGG 0.617537 8.1:+33302901 None:intergenic
AAGGTCACAATTGTAGCCTG+TGG 0.618398 8.1:-33299408 MS.gene82943:CDS
GGATTCACACCTAAAGCTGT+GGG 0.618899 8.1:+33298667 None:intergenic
AGCTTTAGGTGTGAATCCAA+TGG 0.620013 8.1:-33298662 MS.gene82943:CDS
GTACTAGCAGGATCCACCGT+TGG 0.621327 8.1:-33299909 MS.gene82943:CDS
CTAGCAGGATCCACCGTTGG+TGG 0.624167 8.1:-33299906 MS.gene82943:CDS
GACTTGGTGAAATCAGGTAA+TGG 0.624349 8.1:-33299564 MS.gene82943:CDS
TAGAAAGATAGCAAAAGGAG+TGG 0.625803 8.1:-33299481 MS.gene82943:CDS
GTGACAACTGAGGATAGCTA+AGG 0.626621 8.1:+33302911 None:intergenic
AATCGGTTGTGAACCAAACG+GGG 0.631519 8.1:-33298738 MS.gene82943:CDS
TTGGAGGAGTGACCGAGACA+GGG 0.637379 8.1:+33300174 None:intergenic
GGACACATAATAATAAGGGA+AGG 0.638917 8.1:-33298903 MS.gene82943:CDS
CATCCAGTGACAATGGCTTG+GGG 0.639899 8.1:-33299312 MS.gene82943:CDS
AGTCCAATCTGAGTTTGAAG+AGG 0.641653 8.1:-33299745 MS.gene82943:CDS
CAATAGTCCTACACGTTCAG+GGG 0.641900 8.1:+33304100 None:intergenic
TGCAGACCCTCCACCAACGG+TGG 0.647508 8.1:+33299896 None:intergenic
GAAAAGGGTGTCAAGAAATG+GGG 0.649723 8.1:-33299698 MS.gene82943:CDS
AGAAAGGTACATCAGAAACA+TGG 0.654329 8.1:-33299593 MS.gene82943:CDS
GCGGGTGGTTCAGATTGACT+AGG 0.655205 8.1:+33300234 None:intergenic
AGTTATCCAATGTGATGCAG+TGG 0.659208 8.1:-33300117 MS.gene82943:CDS
GGATCAAGGATCAGGAACTG+TGG 0.660579 8.1:-33299037 MS.gene82943:CDS
TATGCTCGGCACATCAGATG+GGG 0.660900 8.1:-33298789 MS.gene82943:CDS
GTCTTGTATAGAGAAAAGAA+AGG 0.661456 8.1:-33299510 MS.gene82943:CDS
CTGAGTAAAGAAGACGAGGA+GGG 0.665117 8.1:+33302801 None:intergenic
TTGCAATCAAACCATTGGCG+AGG 0.674160 8.1:+33299952 None:intergenic
TGACAAAACTGGATATGGCG+CGG 0.679287 8.1:-33299184 MS.gene82943:CDS
CCGAAATGATATCACGCGGG+TGG 0.685282 8.1:+33300219 None:intergenic
CTAACCATGTATGCAAGGAG+TGG 0.690444 8.1:-33299845 MS.gene82943:CDS
GACAAAGAGAATTTACACAA+AGG 0.692193 8.1:-33298976 MS.gene82943:CDS
TTACCTGAGTAAAGAAGACG+AGG 0.695379 8.1:+33302797 None:intergenic
GAATCCGAAATGATATCACG+CGG 0.700868 8.1:+33300215 None:intergenic
CCTGAGTAAAGAAGACGAGG+AGG 0.705618 8.1:+33302800 None:intergenic
ACAACATTCTAAGAGGACGA+TGG 0.711563 8.1:+33302845 None:intergenic
GCTCCACCAGATCACTACTG+TGG 0.730143 8.1:-33299648 MS.gene82943:CDS
ATCGGTTGTGAACCAAACGG+GGG 0.736378 8.1:-33298737 MS.gene82943:CDS
AATCCGAAATGATATCACGC+GGG 0.737950 8.1:+33300216 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTATTATATTTTTAAAT+AGG + chr8.1:33300583-33300602 None:intergenic 0.0%
!!! AATTATTATATTTTTAAATA+GGG + chr8.1:33300582-33300601 None:intergenic 0.0%
!! TATAATAGTACTAATTATTA+AGG + chr8.1:33299911-33299930 None:intergenic 10.0%
!!! AAAAAAAGTCTTTTAAAAAT+TGG - chr8.1:33300719-33300738 MS.gene82943:intron 10.0%
!!! AATCAAATTATTTTTATGAT+TGG + chr8.1:33301322-33301341 None:intergenic 10.0%
!!! ATCAAATTATTTTTATGATT+GGG + chr8.1:33301321-33301340 None:intergenic 10.0%
!!! ATGATTTTTTTTTTTTTTTG+GGG + chr8.1:33301862-33301881 None:intergenic 10.0%
!!! ATTTTAATTTTAAAGAAAGA+AGG - chr8.1:33299565-33299584 MS.gene82943:CDS 10.0%
!!! GTTTTAAATGAAAATTTTTA+AGG + chr8.1:33301056-33301075 None:intergenic 10.0%
!!! TTACATTTTATAAATAGTTT+TGG + chr8.1:33301349-33301368 None:intergenic 10.0%
!!! TTGATCTATATTTTAAAATT+AGG - chr8.1:33299524-33299543 MS.gene82943:CDS 10.0%
!!! TTTTTTTGTAATTATCTTTT+AGG + chr8.1:33301196-33301215 None:intergenic 10.0%
!! AAATGAAATAATAAGGAAAA+TGG - chr8.1:33301954-33301973 MS.gene82943:intron 15.0%
!! ACAATGATTAACATAAATTT+AGG + chr8.1:33299865-33299884 None:intergenic 15.0%
!! ACATAAAATTGTTCTTAATT+TGG + chr8.1:33302383-33302402 None:intergenic 15.0%
!! CAATGATTAACATAAATTTA+GGG + chr8.1:33299864-33299883 None:intergenic 15.0%
!! GTTAAAAAATGTATGATTAA+AGG + chr8.1:33300610-33300629 None:intergenic 15.0%
!!! AATTAACTTTCCTTATTTAA+TGG - chr8.1:33299018-33299037 MS.gene82943:CDS 15.0%
!!! ACTATATTTTTTTTATCAAG+AGG - chr8.1:33302013-33302032 MS.gene82943:intron 15.0%
!!! AGTATATTTTAGAAACTATA+AGG - chr8.1:33299623-33299642 MS.gene82943:CDS 15.0%
!!! TATTCTTCATTTTACAAAAT+TGG + chr8.1:33301152-33301171 None:intergenic 15.0%
!!! TCATACATTTTTTAACTAAA+AGG - chr8.1:33300614-33300633 MS.gene82943:intron 15.0%
!!! TGTTTTATAATTTTGTTCAT+AGG + chr8.1:33302318-33302337 None:intergenic 15.0%
!!! TTTAAAATTTAGTCTACATA+CGG + chr8.1:33301994-33302013 None:intergenic 15.0%
!!! TTTTCCTTATTATTTCATTT+CGG + chr8.1:33301954-33301973 None:intergenic 15.0%
!! AAAACAAACTGAAAATAGAA+TGG - chr8.1:33302332-33302351 MS.gene82943:intron 20.0%
!! AAATAGAATAAAGTGGAATA+TGG - chr8.1:33301719-33301738 MS.gene82943:intron 20.0%
!! AAATGTTCATCTTACAAAAA+TGG + chr8.1:33301685-33301704 None:intergenic 20.0%
!! AATAATGCAATACTAAGAAA+AGG - chr8.1:33303305-33303324 MS.gene82943:intron 20.0%
!! ATAATCAATCTTAAACTTCA+TGG + chr8.1:33299209-33299228 None:intergenic 20.0%
!! ATAATGCAATACTAAGAAAA+GGG - chr8.1:33303306-33303325 MS.gene82943:intron 20.0%
!! ATATTAAATACATATAGCCA+AGG - chr8.1:33298990-33299009 MS.gene82943:CDS 20.0%
!! CACAAAATTGTGAAAATATA+TGG + chr8.1:33300550-33300569 None:intergenic 20.0%
!! CACTTTATTCTATTTAGTAA+AGG + chr8.1:33301714-33301733 None:intergenic 20.0%
!! CTTTACTAAATAGAATAAAG+TGG - chr8.1:33301712-33301731 MS.gene82943:intron 20.0%
!! GTAAAAAAAATAATAACACG+TGG - chr8.1:33300867-33300886 MS.gene82943:intron 20.0%
!! GTAAAAAGTAACTTTGTATT+AGG + chr8.1:33302189-33302208 None:intergenic 20.0%
!! GTTGATATAAAGGATATAAT+TGG + chr8.1:33299667-33299686 None:intergenic 20.0%
!! TATTATATTACTGATGTGTA+TGG - chr8.1:33299924-33299943 MS.gene82943:CDS 20.0%
!! TTAAGGCTATAATTGTAATA+CGG + chr8.1:33299894-33299913 None:intergenic 20.0%
!! TTTGTAAAATGAAGAATAAG+AGG - chr8.1:33301154-33301173 MS.gene82943:intron 20.0%
!!! AATGATCAAAAAGTTATTTC+TGG - chr8.1:33299151-33299170 MS.gene82943:CDS 20.0%
!!! AATTTTTTGCTTGAATTTGA+AGG - chr8.1:33299949-33299968 MS.gene82943:CDS 20.0%
!!! ATTTTCAAATTTGTTCGTTT+TGG + chr8.1:33301122-33301141 None:intergenic 20.0%
!!! CAATAAGTTTGTTGATATAA+AGG + chr8.1:33299677-33299696 None:intergenic 20.0%
!!! CATATATTTTCACAATTTTG+TGG - chr8.1:33300548-33300567 MS.gene82943:intron 20.0%
!!! GTAATTTTGACCATTAAATA+AGG + chr8.1:33299031-33299050 None:intergenic 20.0%
!!! TTACAGTTTTTTTTCTTAGA+GGG - chr8.1:33300982-33301001 MS.gene82943:intron 20.0%
!!! TTTACAGTTTTTTTTCTTAG+AGG - chr8.1:33300981-33301000 MS.gene82943:intron 20.0%
!!! TTTTACTTAAAATTGGTCTT+GGG + chr8.1:33300853-33300872 None:intergenic 20.0%
!!! TTTTGAAAGTAAACTATACA+AGG - chr8.1:33303220-33303239 MS.gene82943:intron 20.0%
!!! TTTTTACTTAAAATTGGTCT+TGG + chr8.1:33300854-33300873 None:intergenic 20.0%
! AAAAATAAATGCATGTGAAG+AGG + chr8.1:33300468-33300487 None:intergenic 25.0%
! AAACAGTGAAAAGATGTAAA+AGG + chr8.1:33300350-33300369 None:intergenic 25.0%
! AAACCCATGTGAAAAAAAAT+TGG - chr8.1:33299746-33299765 MS.gene82943:CDS 25.0%
! AATTGGGACACATAATAATA+AGG - chr8.1:33304111-33304130 MS.gene82943:intron 25.0%
! ATAATCAATAAATGTTGCTG+TGG - chr8.1:33300317-33300336 MS.gene82943:CDS 25.0%
! ATATGGACCAACATATATAT+GGG + chr8.1:33300533-33300552 None:intergenic 25.0%
! ATGTTCTTGAAGTTCTTAAA+AGG - chr8.1:33304416-33304435 MS.gene82943:CDS 25.0%
! ATTGGGACACATAATAATAA+GGG - chr8.1:33304112-33304131 MS.gene82943:CDS 25.0%
! CAAATTAAGGTTTACTTTAG+AGG - chr8.1:33302219-33302238 MS.gene82943:intron 25.0%
! CTATGAGATTAATCTTTAAG+TGG + chr8.1:33299784-33299803 None:intergenic 25.0%
! GGAATGTATATACTAATGTT+TGG + chr8.1:33302266-33302285 None:intergenic 25.0%
! GTATCAAAATTAACCTGTTA+AGG - chr8.1:33301410-33301429 MS.gene82943:intron 25.0%
! GTTTGAGAAATGAAAACATA+GGG - chr8.1:33303669-33303688 MS.gene82943:intron 25.0%
! TACATAGTAGTCAATTTGAA+AGG - chr8.1:33299717-33299736 MS.gene82943:CDS 25.0%
! TATATGGACCAACATATATA+TGG + chr8.1:33300534-33300553 None:intergenic 25.0%
! TTACAAGAAATGTGTATGTT+TGG + chr8.1:33299439-33299458 None:intergenic 25.0%
! TTACATAAAACATCCAAAGA+TGG - chr8.1:33302699-33302718 MS.gene82943:intron 25.0%
! TTGAAGTTCTTAAAAGGAAA+AGG - chr8.1:33304422-33304441 MS.gene82943:CDS 25.0%
! TTTACACAAAGGAATTGAAA+AGG - chr8.1:33304054-33304073 MS.gene82943:intron 25.0%
!! AACCTTAATTTGAGTAAAAG+TGG + chr8.1:33302211-33302230 None:intergenic 25.0%
!! AAGAGTCTTCTTTTAGATAT+TGG - chr8.1:33298705-33298724 MS.gene82943:CDS 25.0%
!! ATAACTTTTTGATCATTCCA+TGG + chr8.1:33299148-33299167 None:intergenic 25.0%
!!! AAAAGTCTGTGTCTTTTTTT+TGG - chr8.1:33301214-33301233 MS.gene82943:intron 25.0%
!!! AAAGTCTGTGTCTTTTTTTT+GGG - chr8.1:33301215-33301234 MS.gene82943:intron 25.0%
!!! AAATATAGATCAACTTGCTA+TGG + chr8.1:33299517-33299536 None:intergenic 25.0%
!!! AAGTTTTATGTGTTCATTGA+AGG - chr8.1:33301253-33301272 MS.gene82943:intron 25.0%
!!! AATTTTTTTTCACATGGGTT+TGG + chr8.1:33299747-33299766 None:intergenic 25.0%
!!! AGTTTTATGTGTTCATTGAA+GGG - chr8.1:33301254-33301273 MS.gene82943:intron 25.0%
!!! CATCCAATTTTTTTTCACAT+GGG + chr8.1:33299752-33299771 None:intergenic 25.0%
!!! CGGTTTTGTAGTTTTTTTTA+GGG + chr8.1:33300795-33300814 None:intergenic 25.0%
!!! GGTTTTGTAGTTTTTTTTAG+GGG + chr8.1:33300794-33300813 None:intergenic 25.0%
!!! GTGATATGTTTTAAATGATG+TGG - chr8.1:33300640-33300659 MS.gene82943:intron 25.0%
!!! TACCACTTTTACTCAAATTA+AGG - chr8.1:33302206-33302225 MS.gene82943:intron 25.0%
!!! TTTACTTAAAATTGGTCTTG+GGG + chr8.1:33300852-33300871 None:intergenic 25.0%
!!! TTTTAAAGAAAGAAGGTTGT+TGG - chr8.1:33299572-33299591 MS.gene82943:CDS 25.0%
AAAAAGTGGTTATAAGGTGT+TGG - chr8.1:33302971-33302990 MS.gene82943:CDS 30.0%
AAAGATACACATTACGATGT+TGG - chr8.1:33300504-33300523 MS.gene82943:intron 30.0%
AAATGATGATCTGATGCAAA+GGG + chr8.1:33299267-33299286 None:intergenic 30.0%
AACTTCAATAACCATGTACT+TGG + chr8.1:33300007-33300026 None:intergenic 30.0%
AAGAAAAAAACAACCCATCA+TGG - chr8.1:33302616-33302635 MS.gene82943:intron 30.0%
AAGAAATGTGTATGTTTGGA+TGG + chr8.1:33299435-33299454 None:intergenic 30.0%
AATCAAGTCATACCTTAACA+GGG + chr8.1:33301521-33301540 None:intergenic 30.0%
ACATTCACTTAATTCTCTCT+TGG - chr8.1:33301611-33301630 MS.gene82943:intron 30.0%
ACTAGTGATTTCATTTGTCT+AGG + chr8.1:33298801-33298820 None:intergenic 30.0%
AGAATTAAGTGAATGTCTGT+GGG + chr8.1:33301607-33301626 None:intergenic 30.0%
AGAGATAGAAAGATAGCAAA+AGG - chr8.1:33303533-33303552 MS.gene82943:intron 30.0%
ATAGTTAAGCTGTGAAAAGT+TGG + chr8.1:33300254-33300273 None:intergenic 30.0%
ATATGTGAGTTGTAAAGTGT+AGG + chr8.1:33301576-33301595 None:intergenic 30.0%
CACAAAATCTTTGTACCTAA+AGG - chr8.1:33302495-33302514 MS.gene82943:intron 30.0%
CCTTATTATTTCATTTCGGA+AGG + chr8.1:33301950-33301969 None:intergenic 30.0%
CCTTCCGAAATGAAATAATA+AGG - chr8.1:33301947-33301966 MS.gene82943:intron 30.0%
CTTTCATCTCATAGCTTATA+CGG + chr8.1:33304018-33304037 None:intergenic 30.0%
GAATTTGAAGGTTGCAAATT+TGG - chr8.1:33299961-33299980 MS.gene82943:CDS 30.0%
GAATTTGACAAAACTGGATA+TGG - chr8.1:33303830-33303849 MS.gene82943:intron 30.0%
GACAAAGAGAATTTACACAA+AGG - chr8.1:33304043-33304062 MS.gene82943:intron 30.0%
GAGAGTTAAGTGTACAAATT+TGG + chr8.1:33302287-33302306 None:intergenic 30.0%
GAGATTAATCTTTAAGTGGA+TGG + chr8.1:33299780-33299799 None:intergenic 30.0%
GCATAATGAGTACATTGTTA+TGG + chr8.1:33302569-33302588 None:intergenic 30.0%
GGAAAGTTAATTAACATCCT+TGG + chr8.1:33299010-33299029 None:intergenic 30.0%
GGTTATTGAAGTTGACATTA+TGG - chr8.1:33300014-33300033 MS.gene82943:CDS 30.0%
GGTTTGAGAAATGAAAACAT+AGG - chr8.1:33303668-33303687 MS.gene82943:intron 30.0%
GTATGAGAATGACATATGTA+TGG + chr8.1:33301663-33301682 None:intergenic 30.0%
GTCTTGTATAGAGAAAAGAA+AGG - chr8.1:33303509-33303528 MS.gene82943:intron 30.0%
GTGTGTTGTGTATTCAAATT+TGG - chr8.1:33302520-33302539 MS.gene82943:intron 30.0%
TAAACTATACAAGGAAGCAA+TGG - chr8.1:33303229-33303248 MS.gene82943:intron 30.0%
TAAATGATGATCTGATGCAA+AGG + chr8.1:33299268-33299287 None:intergenic 30.0%
TATGGACCAACATATATATG+GGG + chr8.1:33300532-33300551 None:intergenic 30.0%
TATGTGAGTTGTAAAGTGTA+GGG + chr8.1:33301575-33301594 None:intergenic 30.0%
TCAAAATGAAACCCAAAAGA+GGG - chr8.1:33301486-33301505 MS.gene82943:intron 30.0%
TCTACTATTGCTTTCTCTAT+TGG + chr8.1:33298607-33298626 None:intergenic 30.0%
TCTAGCAAAAAGTGGTTATA+AGG - chr8.1:33302965-33302984 MS.gene82943:CDS 30.0%
TGAGTTTGAGAAATTTGTGA+AGG - chr8.1:33304168-33304187 MS.gene82943:CDS 30.0%
TTATACTACTATGCCTTAAC+AGG + chr8.1:33301426-33301445 None:intergenic 30.0%
TTTCATCTCATAGCTTATAC+GGG + chr8.1:33304017-33304036 None:intergenic 30.0%
! ACGATCTTTTATATCCATTC+CGG + chr8.1:33303918-33303937 None:intergenic 30.0%
! AGAAAGGAAACTATTTTGCT+AGG - chr8.1:33303000-33303019 MS.gene82943:CDS 30.0%
! CTTTAGGTACAAAGATTTTG+TGG + chr8.1:33302497-33302516 None:intergenic 30.0%
! GTTTTATGTGTTCATTGAAG+GGG - chr8.1:33301255-33301274 MS.gene82943:intron 30.0%
! TAAGAGGTGGTAATTGTTTT+TGG + chr8.1:33298764-33298783 None:intergenic 30.0%
!! CATGATGATGAAGAAGTTTT+AGG - chr8.1:33302747-33302766 MS.gene82943:intron 30.0%
!! GATTGTTGAAAAGTTGATGT+AGG + chr8.1:33302076-33302095 None:intergenic 30.0%
!! GCGGTTTTGTAGTTTTTTTT+AGG + chr8.1:33300796-33300815 None:intergenic 30.0%
!! TCAACTTGCTATGGTATATA+CGG + chr8.1:33299508-33299527 None:intergenic 30.0%
!! TTACTTAAAATTGGTCTTGG+GGG + chr8.1:33300851-33300870 None:intergenic 30.0%
!! TTCCAAGAGTGTTACATTTA+TGG + chr8.1:33300414-33300433 None:intergenic 30.0%
!! TTTCAAAAAGTTCTAGCTCA+TGG + chr8.1:33303208-33303227 None:intergenic 30.0%
!!! GCATCCAATTTTTTTTCACA+TGG + chr8.1:33299753-33299772 None:intergenic 30.0%
!!! GCTTTTGAAATTGACTACAA+TGG - chr8.1:33303560-33303579 MS.gene82943:intron 30.0%
!!! TGGGTTTCATTTTGACTATT+TGG + chr8.1:33301481-33301500 None:intergenic 30.0%
AAAAAACAACCCATCATGGA+AGG - chr8.1:33302620-33302639 MS.gene82943:intron 35.0%
AACAATCTTTCCCTTCTTGA+AGG - chr8.1:33303023-33303042 MS.gene82943:CDS 35.0%
AACTGAAACATCCAAGTACA+TGG - chr8.1:33299993-33300012 MS.gene82943:CDS 35.0%
AATCTCATAGCGAGCTTAAA+AGG - chr8.1:33299794-33299813 MS.gene82943:CDS 35.0%
AATCTGAGTTTGAAGAGGAA+GGG - chr8.1:33303279-33303298 MS.gene82943:intron 35.0%
AATGTGTATGTTTGGATGGA+AGG + chr8.1:33299431-33299450 None:intergenic 35.0%
ACATTGTTGTCTTTGATGGA+AGG + chr8.1:33298846-33298865 None:intergenic 35.0%
ACTTAATTCTCTCTTGGATG+GGG - chr8.1:33301617-33301636 MS.gene82943:intron 35.0%
AGAGAAAGCAATAGTAGAAG+TGG - chr8.1:33298609-33298628 MS.gene82943:CDS 35.0%
AGCAACATTGTTGTCTTTGA+TGG + chr8.1:33298850-33298869 None:intergenic 35.0%
ATACACAACACACATCCTTT+AGG + chr8.1:33302513-33302532 None:intergenic 35.0%
ATAGTAGAAGTGGTAGTTTC+AGG - chr8.1:33298619-33298638 MS.gene82943:CDS 35.0%
ATCAAGTCATACCTTAACAG+GGG + chr8.1:33301520-33301539 None:intergenic 35.0%
ATGGACCAACATATATATGG+GGG + chr8.1:33300531-33300550 None:intergenic 35.0%
ATTAGAACTGAGAATAAGCC+TGG + chr8.1:33303884-33303903 None:intergenic 35.0%
ATTGCAACTTCGTGAAAGTT+AGG + chr8.1:33300765-33300784 None:intergenic 35.0%
CAATCAAGTCATACCTTAAC+AGG + chr8.1:33301522-33301541 None:intergenic 35.0%
CACTTAATTCTCTCTTGGAT+GGG - chr8.1:33301616-33301635 MS.gene82943:intron 35.0%
CATAAAAAAAGCTACGAAGG+AGG - chr8.1:33303776-33303795 MS.gene82943:intron 35.0%
CATTATGGCTACTATCTACA+TGG - chr8.1:33300029-33300048 MS.gene82943:CDS 35.0%
CGCAAAAGAAAAAACTTCCA+TGG - chr8.1:33299128-33299147 MS.gene82943:CDS 35.0%
CTGTTAAGGTATGACTTGAT+TGG - chr8.1:33301520-33301539 MS.gene82943:intron 35.0%
GAGAATTAAGTGAATGTCTG+TGG + chr8.1:33301608-33301627 None:intergenic 35.0%
GAGGATAGCTAAGGATAAAT+GGG + chr8.1:33300102-33300121 None:intergenic 35.0%
GGACACATAATAATAAGGGA+AGG - chr8.1:33304116-33304135 MS.gene82943:CDS 35.0%
GGACATAAAAAAAGCTACGA+AGG - chr8.1:33303773-33303792 MS.gene82943:intron 35.0%
GTCAAAATGAAACCCAAAAG+AGG - chr8.1:33301485-33301504 MS.gene82943:intron 35.0%
GTCCATAAATGTAACACTCT+TGG - chr8.1:33300409-33300428 MS.gene82943:CDS 35.0%
TACTAGTACGGACATATCAT+CGG + chr8.1:33303093-33303112 None:intergenic 35.0%
TAGAAAGATAGCAAAAGGAG+TGG - chr8.1:33303538-33303557 MS.gene82943:intron 35.0%
TATCTCGTGCATGTTTGAAT+TGG - chr8.1:33299328-33299347 MS.gene82943:CDS 35.0%
TATGGTATATACGGCCAATA+AGG + chr8.1:33299499-33299518 None:intergenic 35.0%
TCACATTGGATAACTAGAGA+AGG + chr8.1:33302897-33302916 None:intergenic 35.0%
TCACTTAATTCTCTCTTGGA+TGG - chr8.1:33301615-33301634 MS.gene82943:intron 35.0%
TGAAAAGTCACGTTATCTTC+AGG - chr8.1:33299175-33299194 MS.gene82943:CDS 35.0%
TGAGGATAGCTAAGGATAAA+TGG + chr8.1:33300103-33300122 None:intergenic 35.0%
TGCTACAGTTGCAAAACTTA+GGG + chr8.1:33300820-33300839 None:intergenic 35.0%
TGGTAAAAAAGACATTTGCG+TGG - chr8.1:33303580-33303599 MS.gene82943:intron 35.0%
TGTGGGAAATACACTTGTAT+CGG + chr8.1:33304338-33304357 None:intergenic 35.0%
TTCATTTGTGTCATAGTAGC+AGG + chr8.1:33302471-33302490 None:intergenic 35.0%
TTGCAACTTCGTGAAAGTTA+GGG + chr8.1:33300764-33300783 None:intergenic 35.0%
! AAACTGACTTTCCACCTTAT+TGG - chr8.1:33299482-33299501 MS.gene82943:CDS 35.0%
! AGAAAGGTACATCAGAAACA+TGG - chr8.1:33303426-33303445 MS.gene82943:intron 35.0%
! CTTTCACGAAGTTGCAATTT+TGG - chr8.1:33300767-33300786 MS.gene82943:intron 35.0%
! CTTTTCCAAAGTTGCGATTT+TGG + chr8.1:33301008-33301027 None:intergenic 35.0%
! GCAACTTTGGAAAAGTTAGA+GGG - chr8.1:33301013-33301032 MS.gene82943:intron 35.0%
! GCAAGAACACTTTCATTTTC+AGG - chr8.1:33302587-33302606 MS.gene82943:intron 35.0%
! GTTCTGAACAACATTCTAAG+AGG + chr8.1:33300184-33300203 None:intergenic 35.0%
! TTTTGCAACTGTAGCAGTTT+TGG - chr8.1:33300824-33300843 MS.gene82943:intron 35.0%
! TTTTTCTTGTCGTCCATCTT+TGG + chr8.1:33302715-33302734 None:intergenic 35.0%
!! AAAGTTGATGTAGGCATCTT+TGG + chr8.1:33302067-33302086 None:intergenic 35.0%
!! AAGAAAAGGGTGTCAAGAAA+TGG - chr8.1:33303319-33303338 MS.gene82943:intron 35.0%
!! ACCAAGACAACATCACTTTT+TGG + chr8.1:33300144-33300163 None:intergenic 35.0%
!! ACTTCGTTTTGTTAGAGTTG+AGG - chr8.1:33301793-33301812 MS.gene82943:intron 35.0%
!! AGAAAAGGGTGTCAAGAAAT+GGG - chr8.1:33303320-33303339 MS.gene82943:intron 35.0%
!! ATGGTAGAAGCTTTATTCGT+TGG + chr8.1:33302867-33302886 None:intergenic 35.0%
!! TACTTAAAATTGGTCTTGGG+GGG + chr8.1:33300850-33300869 None:intergenic 35.0%
!! TCGGATTCTCTAAGACAATT+TGG - chr8.1:33302819-33302838 MS.gene82943:CDS 35.0%
!! TGGTTATAAGGTGTTGGTAT+TGG - chr8.1:33302977-33302996 MS.gene82943:CDS 35.0%
!!! TAGCTTTTTTTATGTCCCTC+CGG + chr8.1:33303770-33303789 None:intergenic 35.0%
!!! TTTGGCACATTGATTTTGTG+TGG - chr8.1:33300052-33300071 MS.gene82943:CDS 35.0%
AACAATAGTCCTACACGTTC+AGG + chr8.1:33298924-33298943 None:intergenic 40.0%
AACAGCTCATGTATTTGCAC+TGG - chr8.1:33303955-33303974 MS.gene82943:intron 40.0%
AACGTAGACCGAGTCAAAAT+TGG - chr8.1:33300913-33300932 MS.gene82943:intron 40.0%
AATAAGCCTGGATGCAATGA+AGG + chr8.1:33303872-33303891 None:intergenic 40.0%
AATCCGAAATGATATCACGC+GGG + chr8.1:33302806-33302825 None:intergenic 40.0%
ACAATAGTCCTACACGTTCA+GGG + chr8.1:33298923-33298942 None:intergenic 40.0%
ACAATTTGGATTCCCTGTCT+CGG - chr8.1:33302833-33302852 MS.gene82943:CDS 40.0%
ACTCCTTGCATACATGGTTA+GGG + chr8.1:33303175-33303194 None:intergenic 40.0%
AGCAATGTCTACAGTTGTTG+CGG - chr8.1:33303808-33303827 MS.gene82943:intron 40.0%
AGTCCAATCTGAGTTTGAAG+AGG - chr8.1:33303274-33303293 MS.gene82943:intron 40.0%
AGTGCACCTATTACATGTCA+AGG - chr8.1:33299837-33299856 MS.gene82943:CDS 40.0%
AGTGTATTTCCCACAGCTTT+AGG - chr8.1:33304343-33304362 MS.gene82943:CDS 40.0%
AGTTATCCAATGTGATGCAG+TGG - chr8.1:33302902-33302921 MS.gene82943:CDS 40.0%
ATACTGTTGTTGAGCTTGGT+GGG - chr8.1:33298673-33298692 MS.gene82943:CDS 40.0%
ATCCAATTGCCTTCCATGAT+GGG + chr8.1:33302632-33302651 None:intergenic 40.0%
ATCCTGTCAGTAACATTCCT+AGG - chr8.1:33303345-33303364 MS.gene82943:intron 40.0%
ATCGGTTGCAATCAAACCAT+TGG + chr8.1:33303075-33303094 None:intergenic 40.0%
ATCTCATAGCTTATACGGGT+AGG + chr8.1:33304013-33304032 None:intergenic 40.0%
CAATCTGAGTTTGAAGAGGA+AGG - chr8.1:33303278-33303297 MS.gene82943:intron 40.0%
CTACAGTTGCAAAACTTAGG+GGG + chr8.1:33300818-33300837 None:intergenic 40.0%
CTGCTACAGTTGCAAAACTT+AGG + chr8.1:33300821-33300840 None:intergenic 40.0%
CTTCCTCTTCAAACTCAGAT+TGG + chr8.1:33303280-33303299 None:intergenic 40.0%
GAATCCGAAATGATATCACG+CGG + chr8.1:33302807-33302826 None:intergenic 40.0%
GACATGTAATAGGTGCACTA+AGG + chr8.1:33299836-33299855 None:intergenic 40.0%
GATGCTGTGTGTGAGAAAAT+GGG - chr8.1:33303251-33303270 MS.gene82943:intron 40.0%
GCCAAAAAGTGATGTTGTCT+TGG - chr8.1:33300140-33300159 MS.gene82943:CDS 40.0%
GCTACAGTTGCAAAACTTAG+GGG + chr8.1:33300819-33300838 None:intergenic 40.0%
GGACGACAAGAAAAAGAAGA+TGG - chr8.1:33302720-33302739 MS.gene82943:intron 40.0%
GGACGTACAAACTACAACAT+AGG + chr8.1:33302362-33302381 None:intergenic 40.0%
GGAGAAAGAGAGTTTCTAAG+AGG + chr8.1:33298780-33298799 None:intergenic 40.0%
GGGAAGGAGCTTAAATGTTA+AGG - chr8.1:33304132-33304151 MS.gene82943:CDS 40.0%
GGGTACTAATCTGAAGGAAT+CGG - chr8.1:33304264-33304283 MS.gene82943:CDS 40.0%
GGTATGACTTGATTGGCATT+TGG - chr8.1:33301527-33301546 MS.gene82943:intron 40.0%
GTCTTTGATGGAAGGTAACA+TGG + chr8.1:33298838-33298857 None:intergenic 40.0%
GTGAAGAGGATGACTAAGTA+AGG + chr8.1:33300454-33300473 None:intergenic 40.0%
GTTCATACTGTTGTTGAGCT+TGG - chr8.1:33298669-33298688 MS.gene82943:CDS 40.0%
GTTGCGGAATTTGACAAAAC+TGG - chr8.1:33303824-33303843 MS.gene82943:intron 40.0%
GTTTATCTAGCAAGAGTAGC+AGG + chr8.1:33302449-33302468 None:intergenic 40.0%
TACATCAGAAACATGGCTTG+TGG - chr8.1:33303433-33303452 MS.gene82943:intron 40.0%
TAGGGTCCTTGACATGTAAT+AGG + chr8.1:33299846-33299865 None:intergenic 40.0%
TATCCAATTGCCTTCCATGA+TGG + chr8.1:33302633-33302652 None:intergenic 40.0%
TCGTATGGGTACTAATCTGA+AGG - chr8.1:33304258-33304277 MS.gene82943:CDS 40.0%
TGACATATGTATGGCCAATG+TGG + chr8.1:33301654-33301673 None:intergenic 40.0%
TGCAACTTCGTGAAAGTTAG+GGG + chr8.1:33300763-33300782 None:intergenic 40.0%
TGCAAGGATGGAAAGAAGAA+AGG - chr8.1:33303410-33303429 MS.gene82943:intron 40.0%
TGGAAGGCAATTGGATATAG+TGG - chr8.1:33302636-33302655 MS.gene82943:intron 40.0%
TGGCTACTATCTACATGGTT+TGG - chr8.1:33300034-33300053 MS.gene82943:CDS 40.0%
TTACCTGAGTAAAGAAGACG+AGG + chr8.1:33300225-33300244 None:intergenic 40.0%
TTCCTAGGAATGTTACTGAC+AGG + chr8.1:33303350-33303369 None:intergenic 40.0%
TTGACTAGGCCTTTGTAAAG+CGG + chr8.1:33302774-33302793 None:intergenic 40.0%
TTGGTCCCCCATATATATGT+TGG - chr8.1:33300523-33300542 MS.gene82943:intron 40.0%
! ACAACATTCTAAGAGGACGA+TGG + chr8.1:33300177-33300196 None:intergenic 40.0%
! CGCAACTTTGGAAAAGTTAG+AGG - chr8.1:33301012-33301031 MS.gene82943:intron 40.0%
! GAAAGAGAGTTTCTAAGAGG+TGG + chr8.1:33298777-33298796 None:intergenic 40.0%
! TAGAAGTGGTAGTTTCAGGT+TGG - chr8.1:33298623-33298642 MS.gene82943:CDS 40.0%
! TATTCTCAGTTCTAATGCCG+TGG - chr8.1:33303888-33303907 MS.gene82943:intron 40.0%
! TCATGTATTTGCACTGGCAA+GGG - chr8.1:33303961-33303980 MS.gene82943:intron 40.0%
!! AAGGTGTTGGTATTGGAGAA+AGG - chr8.1:33302984-33303003 MS.gene82943:CDS 40.0%
!! AGAAGTGGTAGTTTCAGGTT+GGG - chr8.1:33298624-33298643 MS.gene82943:CDS 40.0%
!! AGCTTTAGGTGTGAATCCAA+TGG - chr8.1:33304357-33304376 MS.gene82943:CDS 40.0%
!! CCACTTCTTTTGAGTAACGA+CGG + chr8.1:33303650-33303669 None:intergenic 40.0%
!! GAAAAGGGTGTCAAGAAATG+GGG - chr8.1:33303321-33303340 MS.gene82943:intron 40.0%
!! GACTTGGTGAAATCAGGTAA+TGG - chr8.1:33303455-33303474 MS.gene82943:intron 40.0%
!! GCATGTTTGAATTGGTGTTG+AGG - chr8.1:33299336-33299355 MS.gene82943:CDS 40.0%
!! GTAGAAGCTTTATTCGTTGG+AGG + chr8.1:33302864-33302883 None:intergenic 40.0%
!! TGAAAAGGTGCTGAGAATTC+TGG - chr8.1:33304069-33304088 MS.gene82943:intron 40.0%
!!! ATCACTTTTTGGCGTTTCTC+TGG + chr8.1:33300133-33300152 None:intergenic 40.0%
!!! GTTTTAGGACCGCTTTACAA+AGG - chr8.1:33302762-33302781 MS.gene82943:intron 40.0%
AACCCATCATGGAAGGCAAT+TGG - chr8.1:33302627-33302646 MS.gene82943:intron 45.0%
AACCCCTAACCATGTATGCA+AGG - chr8.1:33303169-33303188 MS.gene82943:intron 45.0%
AAGGTCACAATTGTAGCCTG+TGG - chr8.1:33303611-33303630 MS.gene82943:intron 45.0%
AATCGGTTGTGAACCAAACG+GGG - chr8.1:33304281-33304300 MS.gene82943:CDS 45.0%
ACAGGCTACAATTGTGACCT+TGG + chr8.1:33303612-33303631 None:intergenic 45.0%
ACTTGTATAGCCTCGCAACT+AGG + chr8.1:33303491-33303510 None:intergenic 45.0%
AGCAGGTCTATGATGATCCA+GGG + chr8.1:33302432-33302451 None:intergenic 45.0%
AGGTACATTTGATCCAGGGT+TGG + chr8.1:33303050-33303069 None:intergenic 45.0%
ATAGCCTGAACAGTGACCAT+TGG + chr8.1:33304376-33304395 None:intergenic 45.0%
ATATCCATTCCGGAACTCCA+CGG + chr8.1:33303908-33303927 None:intergenic 45.0%
ATGATGATCCAGGGTTCGAT+AGG + chr8.1:33302423-33302442 None:intergenic 45.0%
ATGTCCGTACTAGTACTAGC+AGG - chr8.1:33303098-33303117 MS.gene82943:intron 45.0%
CAAACACCTTCATTGCATCC+AGG - chr8.1:33303863-33303882 MS.gene82943:intron 45.0%
CAACAACCACTGCATCACAT+TGG + chr8.1:33302911-33302930 None:intergenic 45.0%
CAATAGTCCTACACGTTCAG+GGG + chr8.1:33298922-33298941 None:intergenic 45.0%
CAATGTGATGCAGTGGTTGT+TGG - chr8.1:33302909-33302928 MS.gene82943:CDS 45.0%
CACTCCTTGCATACATGGTT+AGG + chr8.1:33303176-33303195 None:intergenic 45.0%
CAGCTGGAGCTGAAGAAATT+GGG - chr8.1:33304095-33304114 MS.gene82943:intron 45.0%
CATACTGTTGTTGAGCTTGG+TGG - chr8.1:33298672-33298691 MS.gene82943:CDS 45.0%
CCGTCGTTACTCAAAAGAAG+TGG - chr8.1:33303647-33303666 MS.gene82943:intron 45.0%
CTAACCATGTATGCAAGGAG+TGG - chr8.1:33303174-33303193 MS.gene82943:intron 45.0%
CTCCTTGCATACATGGTTAG+GGG + chr8.1:33303174-33303193 None:intergenic 45.0%
CTGAGTAAAGAAGACGAGGA+GGG + chr8.1:33300221-33300240 None:intergenic 45.0%
CTTATCGACACCAGTATGCT+CGG - chr8.1:33304216-33304235 MS.gene82943:CDS 45.0%
GAATCCAATGGTCACTGTTC+AGG - chr8.1:33304369-33304388 MS.gene82943:CDS 45.0%
GAATCGGTTGTGAACCAAAC+GGG - chr8.1:33304280-33304299 MS.gene82943:CDS 45.0%
GAGGAGGGTAAGAAGCTTTA+TGG + chr8.1:33300206-33300225 None:intergenic 45.0%
GATCAAATGTACCTCGCCAA+TGG - chr8.1:33303056-33303075 MS.gene82943:intron 45.0%
GCAACTTCGTGAAAGTTAGG+GGG + chr8.1:33300762-33300781 None:intergenic 45.0%
GCATCTTCATCCAGTGACAA+TGG - chr8.1:33303700-33303719 MS.gene82943:intron 45.0%
GGAAGTAGAGGGTCTTTATC+TGG - chr8.1:33304312-33304331 MS.gene82943:CDS 45.0%
GGAATCGGTTGTGAACCAAA+CGG - chr8.1:33304279-33304298 MS.gene82943:CDS 45.0%
GGATCCTGCTAGTACTAGTA+CGG + chr8.1:33303105-33303124 None:intergenic 45.0%
GGATGCTGTGTGTGAGAAAA+TGG - chr8.1:33303250-33303269 MS.gene82943:intron 45.0%
GGATTCACACCTAAAGCTGT+GGG + chr8.1:33304355-33304374 None:intergenic 45.0%
GGTATATACGGCCAATAAGG+TGG + chr8.1:33299496-33299515 None:intergenic 45.0%
GTGACAACTGAGGATAGCTA+AGG + chr8.1:33300111-33300130 None:intergenic 45.0%
TAGCAGGTCTATGATGATCC+AGG + chr8.1:33302433-33302452 None:intergenic 45.0%
TCATCCAGTGACAATGGCTT+GGG - chr8.1:33303706-33303725 MS.gene82943:intron 45.0%
TGACAAAACTGGATATGGCG+CGG - chr8.1:33303835-33303854 MS.gene82943:intron 45.0%
TGATGATCCAGGGTTCGATA+GGG + chr8.1:33302422-33302441 None:intergenic 45.0%
TGCAATTCTTCCTAGTTGCG+AGG - chr8.1:33303478-33303497 MS.gene82943:intron 45.0%
TGCCACAGGTGCAAAACTTA+GGG - chr8.1:33300952-33300971 MS.gene82943:intron 45.0%
TGGATTCACACCTAAAGCTG+TGG + chr8.1:33304356-33304375 None:intergenic 45.0%
TTCATCCAGTGACAATGGCT+TGG - chr8.1:33303705-33303724 MS.gene82943:intron 45.0%
TTGCAATCAAACCATTGGCG+AGG + chr8.1:33303070-33303089 None:intergenic 45.0%
TTTATCTCCCTATCGAACCC+TGG - chr8.1:33302412-33302431 MS.gene82943:intron 45.0%
! ACTAAGGTATCCTCTGGTGT+AGG + chr8.1:33299820-33299839 None:intergenic 45.0%
! AGAAACATGGCTTGTGGACT+TGG - chr8.1:33303439-33303458 MS.gene82943:intron 45.0%
! CTCATGTATTTGCACTGGCA+AGG - chr8.1:33303960-33303979 MS.gene82943:intron 45.0%
! GGGCACTTATACCCTCTTTT+GGG + chr8.1:33301500-33301519 None:intergenic 45.0%
! TGCGCTTTGAACTCTTGATC+AGG + chr8.1:33302663-33302682 None:intergenic 45.0%
! TTTTGCACCTGTGGCAGTTT+TGG + chr8.1:33300948-33300967 None:intergenic 45.0%
!! ACCGAGTCAAAATTGGCCTT+GGG - chr8.1:33300920-33300939 MS.gene82943:intron 45.0%
!! ATGGTTAGGGGTTTTGATGC+TGG + chr8.1:33303162-33303181 None:intergenic 45.0%
!! CTGGATGCAATGAAGGTGTT+TGG + chr8.1:33303865-33303884 None:intergenic 45.0%
!! CTTGTGGACTTGGTGAAATC+AGG - chr8.1:33303449-33303468 MS.gene82943:intron 45.0%
!! GAAGTGGTAGTTTCAGGTTG+GGG - chr8.1:33298625-33298644 MS.gene82943:CDS 45.0%
!! TACTGTGGTTGGTGTTGCTT+GGG - chr8.1:33303386-33303405 MS.gene82943:intron 45.0%
!!! ATTATTATATTTTTAAATAG+GGG + chr8.1:33300581-33300600 None:intergenic 5.0%
!!! TATGATTTTTTTTTTTTTTT+GGG + chr8.1:33301863-33301882 None:intergenic 5.0%
!!! TTATGATTTTTTTTTTTTTT+TGG + chr8.1:33301864-33301883 None:intergenic 5.0%
!!! TTATTTTTTTTACTTAAAAT+TGG + chr8.1:33300860-33300879 None:intergenic 5.0%
AACACGTGGCACCTCACTTA+GGG - chr8.1:33300881-33300900 MS.gene82943:intron 50.0%
AGTATGCTCGGCACATCAGA+TGG - chr8.1:33304228-33304247 MS.gene82943:CDS 50.0%
ATCGGTTGTGAACCAAACGG+GGG - chr8.1:33304282-33304301 MS.gene82943:CDS 50.0%
ATCTGATGTGCCGAGCATAC+TGG + chr8.1:33304229-33304248 None:intergenic 50.0%
CAACCACAGTAGTGATCTGG+TGG + chr8.1:33303377-33303396 None:intergenic 50.0%
CACCAACCACAGTAGTGATC+TGG + chr8.1:33303380-33303399 None:intergenic 50.0%
CACCAGATCACTACTGTGGT+TGG - chr8.1:33303375-33303394 MS.gene82943:intron 50.0%
CAGCCATGGAAGCTGAAGTA+CGG + chr8.1:33298896-33298915 None:intergenic 50.0%
CAGTTGCAAAACTTAGGGGG+CGG + chr8.1:33300815-33300834 None:intergenic 50.0%
CATCCAGTGACAATGGCTTG+GGG - chr8.1:33303707-33303726 MS.gene82943:intron 50.0%
CCACAGGTGCAAAACTTAGG+GGG - chr8.1:33300954-33300973 MS.gene82943:intron 50.0%
CCACCCGCGTGATATCATTT+CGG - chr8.1:33302800-33302819 MS.gene82943:intron 50.0%
CCTCCTCGTCTTCTTTACTC+AGG - chr8.1:33300219-33300238 MS.gene82943:CDS 50.0%
CCTGAGTAAAGAAGACGAGG+AGG + chr8.1:33300222-33300241 None:intergenic 50.0%
CGTTTCTCTGGTGACAACTG+AGG + chr8.1:33300121-33300140 None:intergenic 50.0%
CTACCGTACTTCAGCTTCCA+TGG - chr8.1:33298890-33298909 MS.gene82943:CDS 50.0%
CTGCCACAGGTGCAAAACTT+AGG - chr8.1:33300951-33300970 MS.gene82943:intron 50.0%
GAACCAAACGGGGGAAACAT+GGG - chr8.1:33304291-33304310 MS.gene82943:CDS 50.0%
GAGGGCCAAAATCGCAACTT+TGG - chr8.1:33301000-33301019 MS.gene82943:intron 50.0%
GCAGCTGGAGCTGAAGAAAT+TGG - chr8.1:33304094-33304113 MS.gene82943:intron 50.0%
GCCACAGGTGCAAAACTTAG+GGG - chr8.1:33300953-33300972 MS.gene82943:intron 50.0%
GCTTAAAAGGCCTACACCAG+AGG - chr8.1:33299807-33299826 MS.gene82943:CDS 50.0%
GGATCAAGGATCAGGAACTG+TGG - chr8.1:33303982-33304001 MS.gene82943:intron 50.0%
GGCGAGGTACATTTGATCCA+GGG + chr8.1:33303054-33303073 None:intergenic 50.0%
GGGATACCAACTCTCCACAT+TGG - chr8.1:33301637-33301656 MS.gene82943:intron 50.0%
GGGGAAACATGGGAAGTAGA+GGG - chr8.1:33304301-33304320 MS.gene82943:CDS 50.0%
GGGTATAAGTGCCCCTGTTA+AGG - chr8.1:33301506-33301525 MS.gene82943:intron 50.0%
GTATGCTCGGCACATCAGAT+GGG - chr8.1:33304229-33304248 MS.gene82943:CDS 50.0%
GTATGGCCAATGTGGAGAGT+TGG + chr8.1:33301646-33301665 None:intergenic 50.0%
GTGGAGGGTCTGCAATAAAC+TGG - chr8.1:33303132-33303151 MS.gene82943:intron 50.0%
GTTCTAATGCCGTGGAGTTC+CGG - chr8.1:33303896-33303915 MS.gene82943:intron 50.0%
TAACACGTGGCACCTCACTT+AGG - chr8.1:33300880-33300899 MS.gene82943:intron 50.0%
TATGCTCGGCACATCAGATG+GGG - chr8.1:33304230-33304249 MS.gene82943:CDS 50.0%
TATTGCAGACCCTCCACCAA+CGG + chr8.1:33303129-33303148 None:intergenic 50.0%
TGAACCAAACGGGGGAAACA+TGG - chr8.1:33304290-33304309 MS.gene82943:CDS 50.0%
TGGCGAGGTACATTTGATCC+AGG + chr8.1:33303055-33303074 None:intergenic 50.0%
TTGATGTGGCACCCTAAGTG+AGG + chr8.1:33300895-33300914 None:intergenic 50.0%
! AGGTGCACTAAGGTATCCTC+TGG + chr8.1:33299826-33299845 None:intergenic 50.0%
! GACCGAGTCAAAATTGGCCT+TGG - chr8.1:33300919-33300938 MS.gene82943:intron 50.0%
! GCGGGAGTTCTAGCAAAAAG+TGG - chr8.1:33302957-33302976 MS.gene82943:CDS 50.0%
! TGATCTGGTGGAGCATTCCT+AGG + chr8.1:33303365-33303384 None:intergenic 50.0%
! TGTTGCTTGGGATGCAAGGA+TGG - chr8.1:33303398-33303417 MS.gene82943:intron 50.0%
! TTTGCACTGGCAAGGGATCA+AGG - chr8.1:33303968-33303987 MS.gene82943:intron 50.0%
!! CAGGGTTGGTCCTTCAAGAA+GGG + chr8.1:33303036-33303055 None:intergenic 50.0%
!! CCGAGTCAAAATTGGCCTTG+GGG - chr8.1:33300921-33300940 MS.gene82943:intron 50.0%
!! CGAGTCAAAATTGGCCTTGG+GGG - chr8.1:33300922-33300941 MS.gene82943:intron 50.0%
!! CTACTGTGGTTGGTGTTGCT+TGG - chr8.1:33303385-33303404 MS.gene82943:intron 50.0%
!! GATGCAGTGGTTGTTGGTTC+TGG - chr8.1:33302915-33302934 MS.gene82943:CDS 50.0%
!! GGGGCACTTATACCCTCTTT+TGG + chr8.1:33301501-33301520 None:intergenic 50.0%
!! GGTAGTTTCAGGTTGGGGTT+GGG - chr8.1:33298630-33298649 MS.gene82943:CDS 50.0%
!! TGACTCGGTCTACGTTGATG+TGG + chr8.1:33300909-33300928 None:intergenic 50.0%
!! TGGTAGTTTCAGGTTGGGGT+TGG - chr8.1:33298629-33298648 MS.gene82943:CDS 50.0%
!! TTGGTGTTGCTTGGGATGCA+AGG - chr8.1:33303394-33303413 MS.gene82943:intron 50.0%
!!! CCCCAAGGCCAATTTTGACT+CGG + chr8.1:33300924-33300943 None:intergenic 50.0%
AATGCCGTGGAGTTCCGGAA+TGG - chr8.1:33303901-33303920 MS.gene82943:intron 55.0%
CAGATGGGGAGCTGTCGTAT+GGG - chr8.1:33304244-33304263 MS.gene82943:CDS 55.0%
CAGGTGCAAAACTTAGGGGG+CGG - chr8.1:33300957-33300976 MS.gene82943:intron 55.0%
CATTTGCGTGGTCGAGTCCA+AGG - chr8.1:33303592-33303611 MS.gene82943:intron 55.0%
CCGAAATGATATCACGCGGG+TGG + chr8.1:33302803-33302822 None:intergenic 55.0%
CCTTCTTGAAGGACCAACCC+TGG - chr8.1:33303034-33303053 MS.gene82943:CDS 55.0%
CGCACCACTCCTTGCATACA+TGG + chr8.1:33303181-33303200 None:intergenic 55.0%
CGTACTTCAGCTTCCATGGC+TGG - chr8.1:33298894-33298913 MS.gene82943:CDS 55.0%
CTGAGAATTCTGGCAGCAGC+TGG - chr8.1:33304079-33304098 MS.gene82943:intron 55.0%
CTGGCAAGGGATCAAGGATC+AGG - chr8.1:33303974-33303993 MS.gene82943:intron 55.0%
CTTCCCATGTTTCCCCCGTT+TGG + chr8.1:33304297-33304316 None:intergenic 55.0%
GCGGGTGGTTCAGATTGACT+AGG + chr8.1:33302788-33302807 None:intergenic 55.0%
GCTCCACCAGATCACTACTG+TGG - chr8.1:33303371-33303390 MS.gene82943:intron 55.0%
GGGGGAAACATGGGAAGTAG+AGG - chr8.1:33304300-33304319 MS.gene82943:CDS 55.0%
GTACTAGCAGGATCCACCGT+TGG - chr8.1:33303110-33303129 MS.gene82943:intron 55.0%
TAGCCCCAAGCCATTGTCAC+TGG + chr8.1:33303713-33303732 None:intergenic 55.0%
TCAGATGGGGAGCTGTCGTA+TGG - chr8.1:33304243-33304262 MS.gene82943:CDS 55.0%
TTGGAGGAGTGACCGAGACA+GGG + chr8.1:33302848-33302867 None:intergenic 55.0%
! CCCCCTAAGTTTTGCACCTG+TGG + chr8.1:33300957-33300976 None:intergenic 55.0%
!! CCAGGGTTGGTCCTTCAAGA+AGG + chr8.1:33303037-33303056 None:intergenic 55.0%
!! GTGGTTGTTGGTTCTGGCTC+AGG - chr8.1:33302921-33302940 MS.gene82943:CDS 55.0%
!! GTTGTTGGTTCTGGCTCAGG+AGG - chr8.1:33302924-33302943 MS.gene82943:CDS 55.0%
ATGTCCCTCCGGCCAGAACT+CGG + chr8.1:33303759-33303778 None:intergenic 60.0%
CACCTTCTTCGCCCGAGTTC+TGG - chr8.1:33303744-33303763 MS.gene82943:intron 60.0%
CTAGCAGGATCCACCGTTGG+TGG - chr8.1:33303113-33303132 MS.gene82943:intron 60.0%
GTTGGAGGAGTGACCGAGAC+AGG + chr8.1:33302849-33302868 None:intergenic 60.0%
TTGGGGGCCAAAACTGCCAC+AGG - chr8.1:33300938-33300957 MS.gene82943:intron 60.0%
! CAGGATCCACCGTTGGTGGA+GGG - chr8.1:33303117-33303136 MS.gene82943:intron 60.0%
! CGGAGTGCTTAGTGCTCCAC+AGG + chr8.1:33303630-33303649 None:intergenic 60.0%
! CGGGCGAAGAAGGTGCATCT+GGG + chr8.1:33303739-33303758 None:intergenic 60.0%
! TCGGGCGAAGAAGGTGCATC+TGG + chr8.1:33303740-33303759 None:intergenic 60.0%
! TTCTTCGCCCGAGTTCTGGC+CGG - chr8.1:33303748-33303767 MS.gene82943:intron 60.0%
!! GTTGGTTCTGGCTCAGGAGG+TGG - chr8.1:33302927-33302946 MS.gene82943:CDS 60.0%
!! TGTGGCAGTTTTGGCCCCCA+AGG + chr8.1:33300939-33300958 None:intergenic 60.0%
CTCAGGAGGTGGCGTGGTAG+CGG - chr8.1:33302938-33302957 MS.gene82943:CDS 65.0%
GCTGGCACCCCTGAACGTGT+AGG - chr8.1:33298912-33298931 MS.gene82943:CDS 65.0%
GGCCAGAACTCGGGCGAAGA+AGG + chr8.1:33303749-33303768 None:intergenic 65.0%
TCAGGAGGTGGCGTGGTAGC+GGG - chr8.1:33302939-33302958 MS.gene82943:CDS 65.0%
TGCAGACCCTCCACCAACGG+TGG + chr8.1:33303126-33303145 None:intergenic 65.0%
TGTCCCTCCGGCCAGAACTC+GGG + chr8.1:33303758-33303777 None:intergenic 65.0%
! GCAGGATCCACCGTTGGTGG+AGG - chr8.1:33303116-33303135 MS.gene82943:intron 65.0%
!! ACGTTCAGGGGTGCCAGCCA+TGG + chr8.1:33298910-33298929 None:intergenic 65.0%
!! TTCTGGCTCAGGAGGTGGCG+TGG - chr8.1:33302932-33302951 MS.gene82943:CDS 65.0%
! TCGCCCGAGTTCTGGCCGGA+GGG - chr8.1:33303752-33303771 MS.gene82943:intron 70.0%
! TTCGCCCGAGTTCTGGCCGG+AGG - chr8.1:33303751-33303770 MS.gene82943:intron 70.0%


Chromosome Type Strat End Strand Name
chr8.1 gene 33298594 33304447 33298594 ID=MS.gene82943
chr8.1 mRNA 33298594 33304447 33298594 ID=MS.gene82943.t1;Parent=MS.gene82943
chr8.1 exon 33304112 33304447 33304112 ID=MS.gene82943.t1.exon1;Parent=MS.gene82943.t1
chr8.1 CDS 33304112 33304447 33304112 ID=cds.MS.gene82943.t1;Parent=MS.gene82943.t1
chr8.1 exon 33302801 33303070 33302801 ID=MS.gene82943.t1.exon2;Parent=MS.gene82943.t1
chr8.1 CDS 33302801 33303070 33302801 ID=cds.MS.gene82943.t1;Parent=MS.gene82943.t1
chr8.1 exon 33298594 33300432 33298594 ID=MS.gene82943.t1.exon3;Parent=MS.gene82943.t1
chr8.1 CDS 33298594 33300432 33298594 ID=cds.MS.gene82943.t1;Parent=MS.gene82943.t1
Gene Sequence

>MS.gene82943

ATGGAGAACACCAATAGAGAAAGCAATAGTAGAAGTGGTAGTTTCAGGTTGGGGTTGGGAATGAACGAAGCAAAAGTTCATACTGTTGTTGAGCTTGGTGGGTTTGATACAAAGAGTCTTCTTTTAGATATTGGTCATGATAGCATTGAAGATAGTGAAATTAAACACCAAAAACAATTACCACCTCTTAGAAACTCTCTTTCTCCTAGACAAATGAAATCACTAGTTGCTCTTTGTGATACCATGTTACCTTCCATCAAAGACAACAATGTTGCTGATGAATCTGTCAACAATTTCTACCGTACTTCAGCTTCCATGGCTGGCACCCCTGAACGTGTAGGACTATTGTTATTCTCTCTCTCTCTGATTTTCTTTGTTATTTTTTATTATTATATTATATTAAATACATATAGCCAAGGATGTTAATTAACTTTCCTTATTTAATGGTCAAAATTACTACTTTTTTGATAAAAGAAAACGTGTAGTGATTTTCAATTTTTTATTATGCTTAGTATTTTGATATGCAAGTTCATACGCAAAAGAAAAAACTTCCATGGAATGATCAAAAAGTTATTTCTGGCTGAAAAGTCACGTTATCTTCAGGTTGTACTTCCATGAAGTTTAAGATTGATTATTTTTTTTAATTTAAAATTAAATAAATTTATTAATTCCCTTTGCATCAGATCATCATTTATTCTATTTGTTGCTTGAAAGATAAAAAATCGTGTGAAATATATCTCGTGCATGTTTGAATTGGTGTTGAGGTTGTCAAATTATGATGAGTTATCACAATTTTGACAAAAGTTATATTTTAGAGTGATTTTGACGAACATACCTTCCATCCAAACATACACATTTCTTGTAATCGTTGATATTGATGATGTTTGAAAACTGACTTTCCACCTTATTGGCCGTATATACCATAGCAAGTTGATCTATATTTTAAAATTAGGTTGTTGATTTTTATTTTTATTTTAATTTTAAAGAAAGAAGGTTGTTGGTTTTTGTATTTTTATTTTGTTTCAAATTAGTATATTTTAGAAACTATAAGGTATAATTTATCTTTGTTTCCAATTATATCCTTTATATCAACAAACTTATTGTTTGTGTTTATGAAATGATTTACATAGTAGTCAATTTGAAAGGCAATCCAAACCCATGTGAAAAAAAATTGGATGCTCAACCATCCACTTAAAGATTAATCTCATAGCGAGCTTAAAAGGCCTACACCAGAGGATACCTTAGTGCACCTATTACATGTCAAGGACCCTAAATTTATGTTAATCATTGTATTTGTCCGTATTACAATTATAGCCTTAATAATTAGTACTATTATATTACTGATGTGTATGGTTAATTTTTTGCTTGAATTTGAAGGTTGCAAATTTGGTGAGTGAGAAACTGAAACATCCAAGTACATGGTTATTGAAGTTGACATTATGGCTACTATCTACATGGTTTGGCACATTGATTTTGTGTGGTATTGCAAGTATCTCAACAAAATTCCCATTTATCCTTAGCTATCCTCAGTTGTCACCAGAGAAACGCCAAAAAGTGATGTTGTCTTGGTCTGTAAGTTACCATCGTCCTCTTAGAATGTTGTTCAGAACCATAAAGCTTCTTACCCTCCTCGTCTTCTTTACTCAGGTAAATTATACCAACTTTTCACAGCTTAACTATACTATAAGCATATATGCATTTAATGTCTTCTGTTTCTTTCAGTATAATCAATAAATGTTGCTGTGGTCAACAACCTTTTACATCTTTTCACTGTTTAGTTATATGTACTATATAAAAGTATACATGTACTACTATGTCCATAAATGTAACACTCTTGGAAAAAAAATTGTACACACTCCTTACTTAGTCATCCTCTTCACATGCATTTATTTTTATGCATGAAGATTTTAAAAGATACACATTACGATGTTGGTCCCCCATATATATGTTGGTCCATATATTTTCACAATTTTGTGGATTTGATCCCCTATTTAAAAATATAATAATTTTTGTCCTTTAATCATACATTTTTTAACTAAAAGGAATGTGATATGTTTTAAATGATGTGGTAATATGATTTGTTTATAAAATTATCAATATCGATGAAAAACATAGATGAAATTGTAAAAAAAGTCTTTTAAAAATTGGCTTAATAGCAGTTTTCGCCCCCTAACTTTCACGAAGTTGCAATTTTGGTCCCCTAAAAAAAACTACAAAACCGCCCCCTAAGTTTTGCAACTGTAGCAGTTTTGGCCCCCCAAGACCAATTTTAAGTAAAAAAAATAATAACACGTGGCACCTCACTTAGGGTGCCACATCAACGTAGACCGAGTCAAAATTGGCCTTGGGGGCCAAAACTGCCACAGGTGCAAAACTTAGGGGGCGGTTTTACAGTTTTTTTTCTTAGAGGGCCAAAATCGCAACTTTGGAAAAGTTAGAGGGCTAAAACTGCTATTAAACCTTAAAAATTTTCATTTAAAACATGTCAAATCATCATATTTTAGATCAAATATTTGATGAAGAGACCAAAACGAACAAATTTGAAAATCGTATGACCAATTTTGTAAAATGAAGAATAAGAGGATAAAATACAATTAGACCTAAAAGATAATTACAAAAAAAAAGTCTGTGTCTTTTTTTTGGGTACAAGTATATGTGTAAGTTTTATGTGTTCATTGAAGGGGTTTCAACATGCGTGAAGTATGATATGAATCATATTAATAGCCCAATCATAAAAATAATTTGATTTTAACCAAAACTATTTATAAAATGTAAAATAAAATGTGATTTGTTCACAATGTAAATGTTTATACAGTGTATCAAAATTAACCTGTTAAGGCATAGTAGTATAATTTAGTCTAATAATAATGAGAGCATTAATGTGCCAAATAGTCAAAATGAAACCCAAAAGAGGGTATAAGTGCCCCTGTTAAGGTATGACTTGATTGGCATTTGGTTTCAAATTAAAAAACTGTGTGCCCTACACTTTACAACTCACATATCACAGTCACCCACAGACATTCACTTAATTCTCTCTTGGATGGGGATACCAACTCTCCACATTGGCCATACATATGTCATTCTCATACCATTTTTGTAAGATGAACATTTTTTTTTCCTTTACTAAATAGAATAAAGTGGAATATGGTTGAGTTATAATTTATAAATGTAATTTTAAAATTTCAACTTAATTTCATAAACTTCGTTTTGTTAGAGTTGAGGTTGAAGTGATTTTTTTTTTTTAATATGCATTTCATCTGTCTTTCCCCAAAAAAAAAAAAAAATCATAAACTTCAATTTGTTAGAGTTGAGTTTGAATTGATTTATTTGTCAAAATGAAAATAATTTATACTCCTTCCGAAATGAAATAATAAGGAAAATGGTAGTTAAAAAATTGCCGTATGTAGACTAAATTTTAAACTATATTTTTTTTATCAAGAGGAAAATAAAAGACAATAAAAACAAACTAGCCAAAGATGCCTACATCAACTTTTCAACAATCATTTTTTTTATATTTTATTTCGCAGAGTATTTAAGTATATTTACTATGAAAACAAAATTTTATAGTAAATCTTAAATGTCATTTTTTTAACCTAATACAAAGTTACTTTTTACCACTTTTACTCAAATTAAGGTTTACTTTAGAGGTAAATCAATTTTGTGTTATAACCAAACATTAGTATATACATTCCAAATTTGTACACTTAACTCTCACTTCAGTCCTATGAACAAAATTATAAAACAAACTGAAAATAGAATGGAAAACCTATGTTGTAGTTTGTACGTCCAAATTAAGAACAATTTTATGTCATGCATTGTTTATCTCCCTATCGAACCCTGGATCATCATAGACCTGCTACTCTTGCTAGATAAACCTGCTACTATGACACAAATGAAACACCACAAAATCTTTGTACCTAAAGGATGTGTGTTGTGTATTCAAATTTGGTGTGTCTTTCTGATTGCTTAGAACCATAACAATGTACTCATTATGCAAGAACACTTTCATTTTCAGGTAGATGAAGAAAAAAACAACCCATCATGGAAGGCAATTGGATATAGTGGACCTGATCAAGAGTTCAAAGCGCAGCGAAAGAACAAAATTTTACATAAAACATCCAAAGATGGACGACAAGAAAAAGAAGATGGTGATCATGATGATGAAGAAGTTTTAGGACCGCTTTACAAAGGCCTAGTCAATCTGAACCACCCGCGTGATATCATTTCGGATTCTCTAAGACAATTTGGATTCCCTGTCTCGGTCACTCCTCCAACGAATAAAGCTTCTACCATCTCATCTCCTTCTCTAGTTATCCAATGTGATGCAGTGGTTGTTGGTTCTGGCTCAGGAGGTGGCGTGGTAGCGGGAGTTCTAGCAAAAAGTGGTTATAAGGTGTTGGTATTGGAGAAAGGAAACTATTTTGCTAGGAACAATCTTTCCCTTCTTGAAGGACCAACCCTGGATCAAATGTACCTCGCCAATGGTTTGATTGCAACCGATGATATGTCCGTACTAGTACTAGCAGGATCCACCGTTGGTGGAGGGTCTGCAATAAACTGGTCAGCCAGCATCAAAACCCCTAACCATGTATGCAAGGAGTGGTGCGATCGCCATGAGCTAGAACTTTTTGAAAGTAAACTATACAAGGAAGCAATGGATGCTGTGTGTGAGAAAATGGGAGTCCAATCTGAGTTTGAAGAGGAAGGGTTTAATAATGCAATACTAAGAAAAGGGTGTCAAGAAATGGGGTATCCTGTCAGTAACATTCCTAGGAATGCTCCACCAGATCACTACTGTGGTTGGTGTTGCTTGGGATGCAAGGATGGAAAGAAGAAAGGTACATCAGAAACATGGCTTGTGGACTTGGTGAAATCAGGTAATGGTGCAATTCTTCCTAGTTGCGAGGCTATACAAGTCTTGTATAGAGAAAAGAAAGGAAGAGATAGAAAGATAGCAAAAGGAGTGGCTTTTGAAATTGACTACAATGGTAAAAAAGACATTTGCGTGGTCGAGTCCAAGGTCACAATTGTAGCCTGTGGAGCACTAAGCACTCCGTCGTTACTCAAAAGAAGTGGTTTGAGAAATGAAAACATAGGGAGAAACTTGCATCTTCATCCAGTGACAATGGCTTGGGGCTACTTCCCAGATGCACCTTCTTCGCCCGAGTTCTGGCCGGAGGGACATAAAAAAAGCTACGAAGGAGGAATTATGACAGCAATGTCTACAGTTGTTGCGGAATTTGACAAAACTGGATATGGCGCGGTGATCCAAACACCTTCATTGCATCCAGGCTTATTCTCAGTTCTAATGCCGTGGAGTTCCGGAATGGATATAAAAGATCGTATGCGCAAGTTTTCAAGAACAGCTCATGTATTTGCACTGGCAAGGGATCAAGGATCAGGAACTGTGGATTCACCTACCCGTATAAGCTATGAGATGAAAGATGTAGACAAAGAGAATTTACACAAAGGAATTGAAAAGGTGCTGAGAATTCTGGCAGCAGCTGGAGCTGAAGAAATTGGGACACATAATAATAAGGGAAGGAGCTTAAATGTTAAGGAAGTGAGCTATCATGAGTTTGAGAAATTTGTGAAGGAAGAAAGTTCAATGCTGTTAACTGACTTATCGACACCAGTATGCTCGGCACATCAGATGGGGAGCTGTCGTATGGGTACTAATCTGAAGGAATCGGTTGTGAACCAAACGGGGGAAACATGGGAAGTAGAGGGTCTTTATCTGGCCGATACAAGTGTATTTCCCACAGCTTTAGGTGTGAATCCAATGGTCACTGTTCAGGCTATTGCATATTGCACAGCACAACATGTTCTTGAAGTTCTTAAAAGGAAAAGGTGA
Protein sequence

>MS.gene82943.t1

MENTNRESNSRSGSFRLGLGMNEAKVHTVVELGGFDTKSLLLDIGHDSIEDSEIKHQKQLPPLRNSLSPRQMKSLVALCDTMLPSIKDNNVADESVNNFYRTSASMAGTPERVANLVSEKLKHPSTWLLKLTLWLLSTWFGTLILCGIASISTKFPFILSYPQLSPEKRQKVMLSWSVSYHRPLRMLFRTIKLLTLLVFFTQVDEEKNNPSWKAIGYSGPDQEFKAQRKNKILHKTSKDGRQEKEDGDHDDEEVLGPLYKGLVNLNHPRDIISDSLRQFGFPVSVTPPTNKASTISSPSLVIQCDAVVVGSGSGGGVVAGVLAKSGYKVLVLEKGNYFARNNLSLLEGPTLDQMYLANGLIATDDMSVLVLAGSTVGGGSAINWSASIKTPNHVCKEWCDRHELELFESKLYKEAMDAVCEKMGVQSEFEEEGFNNAILRKGCQEMGYPVSNIPRNAPPDHYCGWCCLGCKDGKKKGTSETWLVDLVKSGNGAILPSCEAIQVLYREKKGRDRKIAKGVAFEIDYNGKKDICVVESKVTIVACGALSTPSLLKRSGLRNENIGRNLHLHPVTMAWGYFPDAPSSPEFWPEGHKKSYEGGIMTAMSTVVAEFDKTGYGAVIQTPSLHPGLFSVLMPWSSGMDIKDRMRKFSRTAHVFALARDQGSGTVDSPTRISYEMKDVDKENLHKGIEKVLRILAAAGAEEIGTHNNKGRSLNVKEVSYHEFEKFVKEESSMLLTDLSTPVCSAHQMGSCRMGTNLKESVVNQTGETWEVEGLYLADTSVFPTALGVNPMVTVQAIAYCTAQHVLEVLKRKR