Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72746.t1 | XP_003612495.2 | 97.4 | 618 | 16 | 0 | 2 | 619 | 214 | 831 | 0.00E+00 | 1234.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72746.t1 | O65709 | 61.8 | 617 | 211 | 6 | 2 | 617 | 134 | 726 | 2.0e-213 | 743.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72746.t1 | G7K421 | 97.4 | 618 | 16 | 0 | 2 | 619 | 214 | 831 | 0.0e+00 | 1234.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056511 | MS.gene72746 | 0.808825 | 2.56E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene72746 | 0.812899 | 3.36E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene96835 | MS.gene72746 | PPI |
| MS.gene72746 | MS.gene045422 | PPI |
| MS.gene72746 | MS.gene006744 | PPI |
| MS.gene72746 | MS.gene031565 | PPI |
| MS.gene71426 | MS.gene72746 | PPI |
| MS.gene72746 | MS.gene031564 | PPI |
| MS.gene72746 | MS.gene006743 | PPI |
| MS.gene72746 | MS.gene045420 | PPI |
| MS.gene72746 | MS.gene004828 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72746.t1 | MTR_5g025650 | 97.411 | 618 | 16 | 0 | 2 | 619 | 214 | 831 | 0.0 | 1261 |
| MS.gene72746.t1 | MTR_8g072210 | 78.930 | 617 | 124 | 3 | 2 | 617 | 199 | 810 | 0.0 | 991 |
| MS.gene72746.t1 | MTR_7g097210 | 45.261 | 612 | 279 | 11 | 11 | 614 | 2 | 565 | 1.94e-161 | 474 |
| MS.gene72746.t1 | MTR_7g097210 | 45.000 | 620 | 285 | 11 | 3 | 614 | 164 | 735 | 1.28e-158 | 473 |
| MS.gene72746.t1 | MTR_4g080890 | 44.462 | 632 | 291 | 12 | 2 | 617 | 165 | 752 | 8.61e-158 | 471 |
| MS.gene72746.t1 | MTR_4g080823 | 43.810 | 630 | 294 | 12 | 2 | 615 | 174 | 759 | 6.03e-156 | 467 |
| MS.gene72746.t1 | MTR_1g075650 | 40.770 | 623 | 277 | 13 | 1 | 616 | 1 | 538 | 6.52e-152 | 449 |
| MS.gene72746.t1 | MTR_0651s0010 | 44.000 | 525 | 243 | 9 | 2 | 517 | 165 | 647 | 2.71e-125 | 384 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72746.t1 | AT4G19380 | 61.750 | 617 | 211 | 6 | 2 | 617 | 176 | 768 | 0.0 | 716 |
| MS.gene72746.t1 | AT4G19380 | 61.750 | 617 | 211 | 6 | 2 | 617 | 134 | 726 | 0.0 | 715 |
| MS.gene72746.t1 | AT3G23410 | 43.274 | 617 | 299 | 11 | 2 | 609 | 94 | 668 | 2.27e-152 | 455 |
| MS.gene72746.t1 | AT3G23410 | 43.248 | 622 | 300 | 13 | 2 | 613 | 162 | 740 | 1.41e-151 | 455 |
| MS.gene72746.t1 | AT1G03990 | 42.784 | 582 | 301 | 9 | 46 | 617 | 197 | 756 | 1.17e-150 | 453 |
| MS.gene72746.t1 | AT4G28570 | 41.546 | 621 | 317 | 9 | 3 | 616 | 164 | 745 | 5.78e-146 | 441 |
| MS.gene72746.t1 | AT4G28570 | 41.546 | 621 | 317 | 9 | 3 | 616 | 164 | 745 | 5.78e-146 | 441 |
Find 162 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGTCATGCCGTGGGTTTC+TGG | 0.086839 | 5.3:-15238607 | MS.gene72746:CDS |
| ACTCGCGTTCTTTACATTTA+AGG | 0.132660 | 5.3:+15238363 | None:intergenic |
| TTTAACTGAGCTTTGAATTC+TGG | 0.175339 | 5.3:+15239849 | None:intergenic |
| GGAAGCTGTTTGCGAGAAAA+TGG | 0.231686 | 5.3:-15239265 | MS.gene72746:CDS |
| TACTGTGGATGGTGCTGTTT+GGG | 0.273785 | 5.3:-15239129 | MS.gene72746:CDS |
| TAACAAATTGCTCAAATTCA+TGG | 0.278370 | 5.3:+15238338 | None:intergenic |
| AACTTTCATCGCTGTACAAC+CGG | 0.293717 | 5.3:+15239026 | None:intergenic |
| GGCAATGGGGCGATTCTTCC+CGG | 0.304802 | 5.3:-15239045 | MS.gene72746:CDS |
| ATGAATATCTTCATATTATC+AGG | 0.322533 | 5.3:-15239417 | MS.gene72746:CDS |
| TGGAGTTGTAGCCGGAATTC+TGG | 0.330538 | 5.3:-15239568 | MS.gene72746:CDS |
| GTAGGTTCTGCAGGTGCATC+AGG | 0.336259 | 5.3:+15238778 | None:intergenic |
| ACCGGCATTTGCCAGAATTC+CGG | 0.343046 | 5.3:+15239557 | None:intergenic |
| GCGAAAAGGGTGTCAAGAAA+TGG | 0.352000 | 5.3:-15239196 | MS.gene72746:CDS |
| GTTGCAGAGTTTGAGAAATC+AGG | 0.360781 | 5.3:-15238679 | MS.gene72746:CDS |
| GTCGACACTCTAAGACGATT+TGG | 0.360914 | 5.3:-15239699 | MS.gene72746:CDS |
| ATTGATTGAACAGTGATCAT+TGG | 0.361825 | 5.3:+15238130 | None:intergenic |
| TTCATCCAGTGGTAATGGCC+TGG | 0.367497 | 5.3:-15238810 | MS.gene72746:CDS |
| CTACTGTGGATGGTGCTGTT+TGG | 0.368930 | 5.3:-15239130 | MS.gene72746:CDS |
| TCATCCAGTGGTAATGGCCT+GGG | 0.372030 | 5.3:-15238809 | MS.gene72746:CDS |
| TTTCGACGGGTAACCGAGAC+AGG | 0.374753 | 5.3:+15239672 | None:intergenic |
| GAATCGGTGGTGAAGGAGAC+AGG | 0.376187 | 5.3:-15238223 | MS.gene72746:CDS |
| CACTGCACAATCAGTTCTTC+AGG | 0.380888 | 5.3:-15238098 | MS.gene72746:CDS |
| TGATAAGGTACTGAGAATTC+TGG | 0.393118 | 5.3:-15238434 | MS.gene72746:CDS |
| AATCAGAAGACAATTGTTCA+TGG | 0.394390 | 5.3:-15239899 | MS.gene72746:CDS |
| TTTGTGCTCGGCACATCAGA+TGG | 0.395922 | 5.3:-15238275 | MS.gene72746:CDS |
| TCCTTCACCACCGATTCCTT+CGG | 0.397068 | 5.3:+15238229 | None:intergenic |
| AACAATCTTTCTCTTCTTGA+AGG | 0.398166 | 5.3:-15239492 | MS.gene72746:CDS |
| AATTGTTCATGGAAAGCAAT+TGG | 0.401562 | 5.3:-15239888 | MS.gene72746:CDS |
| ATTTGAGCAATTTGTTAAAG+AGG | 0.404396 | 5.3:-15238332 | MS.gene72746:CDS |
| TTCTCAAACTCTGCAACAAC+AGG | 0.414686 | 5.3:+15238685 | None:intergenic |
| GCAGCCGGCGCTGAAGAGAT+TGG | 0.415903 | 5.3:-15238409 | MS.gene72746:CDS |
| GTGGTAGTTGGTTCCGGCTC+AGG | 0.417463 | 5.3:-15239594 | MS.gene72746:CDS |
| CAAAACCAACACTTTGTAAC+CGG | 0.424473 | 5.3:+15239539 | None:intergenic |
| CGGTTACAAAGTGTTGGTTT+TGG | 0.424634 | 5.3:-15239538 | MS.gene72746:CDS |
| CGGGATGCAATGCAGGTGTT+TGG | 0.425205 | 5.3:+15238641 | None:intergenic |
| GACGCTGTGGTAGTTGGTTC+CGG | 0.429362 | 5.3:-15239600 | MS.gene72746:CDS |
| AAGTCGTATAAGTTATGAAA+TGG | 0.433596 | 5.3:-15238491 | MS.gene72746:CDS |
| CACATCAGATGGGGTCTTGT+CGG | 0.437145 | 5.3:-15238264 | MS.gene72746:CDS |
| ATGGTGCTGTTTGGGATGTA+AGG | 0.442606 | 5.3:-15239121 | MS.gene72746:CDS |
| AATGTACCAATCTGGCGGTT+TGG | 0.443491 | 5.3:-15239454 | MS.gene72746:CDS |
| GGAAACATGGTTGGTGGACT+TGG | 0.443920 | 5.3:-15239076 | MS.gene72746:CDS |
| GTGGAGGGTCTGCAATCAAT+TGG | 0.448779 | 5.3:-15239383 | MS.gene72746:CDS |
| TTTACAGAAGGGAATTGATA+AGG | 0.449122 | 5.3:-15238449 | MS.gene72746:CDS |
| AGTGTCTTTCCTACAGCGTT+GGG | 0.451621 | 5.3:-15238160 | MS.gene72746:CDS |
| CGAAAAGGGTGTCAAGAAAT+GGG | 0.454222 | 5.3:-15239195 | MS.gene72746:CDS |
| GACAGGGGAGACATGGGAAG+TGG | 0.458715 | 5.3:-15238206 | MS.gene72746:CDS |
| GATGCATCTGTAGGTTCTGC+AGG | 0.459293 | 5.3:+15238769 | None:intergenic |
| TAGCCCCAGGCCATTACCAC+TGG | 0.460579 | 5.3:+15238805 | None:intergenic |
| CCCTTTGTAAAGAGGTCCTA+TGG | 0.460808 | 5.3:+15239755 | None:intergenic |
| GTTGGTTCCGGCTCAGGAGG+TGG | 0.462813 | 5.3:-15239588 | MS.gene72746:CDS |
| ACAAGCTACAATTGTGACCT+TGG | 0.466676 | 5.3:+15238906 | None:intergenic |
| TTGGTGGACTTGGTGAAATC+TGG | 0.468212 | 5.3:-15239066 | MS.gene72746:CDS |
| TGAAGGAGACAGGGGAGACA+TGG | 0.471232 | 5.3:-15238213 | MS.gene72746:CDS |
| ACTTGGTGAAATCTGGCAAT+GGG | 0.471710 | 5.3:-15239059 | MS.gene72746:CDS |
| GCATCTTCATCCAGTGGTAA+TGG | 0.475705 | 5.3:-15238815 | MS.gene72746:CDS |
| CAGTTCTTCAGGTTCTGAAA+AGG | 0.477971 | 5.3:-15238087 | MS.gene72746:CDS |
| GAAACCTTCCTCTTCTATCT+CGG | 0.481514 | 5.3:+15239233 | None:intergenic |
| GTGTCAAGAAATGGGATATC+CGG | 0.481751 | 5.3:-15239187 | MS.gene72746:CDS |
| TGCATCAGGGAAGTAGCCCC+AGG | 0.482828 | 5.3:+15238792 | None:intergenic |
| TGAGCTTTGAATTCTGGATC+AGG | 0.482943 | 5.3:+15239855 | None:intergenic |
| TTCCTTGGAATGTTATTCAC+CGG | 0.482990 | 5.3:+15239168 | None:intergenic |
| ATGGATCAAATGTACCAATC+TGG | 0.485800 | 5.3:-15239462 | MS.gene72746:CDS |
| CTCATATATTTGCACTAGCA+AGG | 0.487990 | 5.3:-15238543 | MS.gene72746:CDS |
| TTGTGCTCGGCACATCAGAT+GGG | 0.494296 | 5.3:-15238274 | MS.gene72746:CDS |
| CCATAGGACCTCTTTACAAA+GGG | 0.499145 | 5.3:-15239755 | MS.gene72746:CDS |
| CATTCTCGATTGTCATGCCG+TGG | 0.499519 | 5.3:-15238615 | MS.gene72746:CDS |
| TGATCAGACGAAGCATTCCT+TGG | 0.500152 | 5.3:+15239153 | None:intergenic |
| GGGATCTAATCCGAAGGAAT+CGG | 0.502365 | 5.3:-15238239 | MS.gene72746:CDS |
| GACTTGGTGAAATCTGGCAA+TGG | 0.502806 | 5.3:-15239060 | MS.gene72746:CDS |
| CTGAGGTGTGGCCCGAGACA+TGG | 0.502920 | 5.3:-15238747 | MS.gene72746:CDS |
| AATGTACCGGGATGCAATGC+AGG | 0.504077 | 5.3:+15238634 | None:intergenic |
| CGAATTGTATCAAGAAGCTA+TGG | 0.505419 | 5.3:-15239286 | MS.gene72746:CDS |
| ATATTATCAGGATCAACTGT+TGG | 0.505490 | 5.3:-15239405 | MS.gene72746:CDS |
| TCACATTGTATAACTAAAGA+AGG | 0.507906 | 5.3:+15239621 | None:intergenic |
| TCAGATGGGGTCTTGTCGGA+TGG | 0.510460 | 5.3:-15238260 | MS.gene72746:CDS |
| TGGTACATTTGATCCATTGT+TGG | 0.511444 | 5.3:+15239468 | None:intergenic |
| AAGTGTCTTTCCTACAGCGT+TGG | 0.513668 | 5.3:-15238161 | MS.gene72746:CDS |
| AAAGAAGGAGATGATAAGCT+TGG | 0.514270 | 5.3:+15239636 | None:intergenic |
| TCTTCTTGAAGGACCAACAA+TGG | 0.515800 | 5.3:-15239481 | MS.gene72746:CDS |
| TCCGAAGGAATCGGTGGTGA+AGG | 0.516816 | 5.3:-15238230 | MS.gene72746:CDS |
| TACAACTCCACCTCCTGAGC+CGG | 0.517239 | 5.3:+15239581 | None:intergenic |
| CCTTTCGACGCCTTTGTGCT+CGG | 0.518797 | 5.3:-15238287 | MS.gene72746:CDS |
| TTGCAACCAAACCGCCAGAT+TGG | 0.521706 | 5.3:+15239448 | None:intergenic |
| ATGTAAGGATGGAAAGAAGA+AGG | 0.521921 | 5.3:-15239106 | MS.gene72746:CDS |
| CCATCATTGCTTAAAAGAAG+CGG | 0.529615 | 5.3:-15238868 | MS.gene72746:CDS |
| GAAGCTGTTTGCGAGAAAAT+GGG | 0.530053 | 5.3:-15239264 | MS.gene72746:CDS |
| TTTGCACTAGCAAGGGATCA+AGG | 0.531399 | 5.3:-15238535 | MS.gene72746:CDS |
| ATTTCATAACTTATACGACT+TGG | 0.533418 | 5.3:+15238493 | None:intergenic |
| CTGAGAATTCTGGCTGCAGC+CGG | 0.533445 | 5.3:-15238424 | MS.gene72746:CDS |
| TGCTGTTTGGGATGTAAGGA+TGG | 0.534914 | 5.3:-15239117 | MS.gene72746:CDS |
| CTAGCAAGGGATCAAGGATC+GGG | 0.535447 | 5.3:-15238529 | MS.gene72746:CDS |
| GCCGGAATTCTGGCAAATGC+CGG | 0.537102 | 5.3:-15239558 | MS.gene72746:CDS |
| ATGACAATCGAGAATGTACC+GGG | 0.538959 | 5.3:+15238622 | None:intergenic |
| AAATGCCGGTTACAAAGTGT+TGG | 0.540631 | 5.3:-15239544 | MS.gene72746:CDS |
| TCAGGAGGTGGAGTTGTAGC+CGG | 0.545470 | 5.3:-15239576 | MS.gene72746:CDS |
| GAAGGAGACAGGGGAGACAT+GGG | 0.547527 | 5.3:-15238212 | MS.gene72746:CDS |
| TCAGGATCAACTGTTGGTGG+AGG | 0.550654 | 5.3:-15239399 | MS.gene72746:CDS |
| CAATGTGACGCTGTGGTAGT+TGG | 0.551132 | 5.3:-15239606 | MS.gene72746:CDS |
| TGGACAAGCCCTTTGTAAAG+AGG | 0.551242 | 5.3:+15239747 | None:intergenic |
| CAGATGGGGTCTTGTCGGAT+GGG | 0.552514 | 5.3:-15238259 | MS.gene72746:CDS |
| ACGATTTGGATTCCCTGTCT+CGG | 0.555886 | 5.3:-15239685 | MS.gene72746:CDS |
| CACTCTTTGCACACATGCTG+AGG | 0.558971 | 5.3:+15239342 | None:intergenic |
| ATCCGGTGAATAACATTCCA+AGG | 0.560229 | 5.3:-15239170 | MS.gene72746:CDS |
| CATTTGCGTGGTCGAATCCA+AGG | 0.560871 | 5.3:-15238923 | MS.gene72746:CDS |
| GATGAAGAGAATTTACAGAA+GGG | 0.562115 | 5.3:-15238460 | MS.gene72746:CDS |
| TGATGAAGAGAATTTACAGA+AGG | 0.564493 | 5.3:-15238461 | MS.gene72746:CDS |
| AGGGGAGACATGGGAAGTGG+AGG | 0.564528 | 5.3:-15238203 | MS.gene72746:CDS |
| CATCCAGTGGTAATGGCCTG+GGG | 0.571311 | 5.3:-15238808 | MS.gene72746:CDS |
| CGTCTGATCACTACTGTGGA+TGG | 0.572747 | 5.3:-15239140 | MS.gene72746:CDS |
| AATCGGTGGTGAAGGAGACA+GGG | 0.576864 | 5.3:-15238222 | MS.gene72746:CDS |
| GTGTCGACAGTGATGTCTCT+CGG | 0.579082 | 5.3:+15239714 | None:intergenic |
| GGATTCACGCCCAACGCTGT+AGG | 0.579907 | 5.3:+15238151 | None:intergenic |
| AGAAAGGAGGGTATTCAGCT+AGG | 0.580570 | 5.3:-15239515 | MS.gene72746:CDS |
| ACTAGCAAGGGATCAAGGAT+CGG | 0.582652 | 5.3:-15238530 | MS.gene72746:CDS |
| GCCATAGGACCTCTTTACAA+AGG | 0.583066 | 5.3:-15239756 | MS.gene72746:CDS |
| TGTAAGGATGGAAAGAAGAA+GGG | 0.584589 | 5.3:-15239105 | MS.gene72746:CDS |
| CATGACAATCGAGAATGTAC+CGG | 0.588067 | 5.3:+15238621 | None:intergenic |
| TGTCTCTCGGATAGTTGAGA+TGG | 0.589798 | 5.3:+15239727 | None:intergenic |
| CAAACACCTGCATTGCATCC+CGG | 0.593582 | 5.3:-15238640 | MS.gene72746:CDS |
| GAGTTTGAGAAATCAGGATA+CGG | 0.596660 | 5.3:-15238673 | MS.gene72746:CDS |
| AGAAGGGTACGTCGGAAACA+TGG | 0.597277 | 5.3:-15239089 | MS.gene72746:CDS |
| CCGAGCACAAAGGCGTCGAA+AGG | 0.598910 | 5.3:+15238287 | None:intergenic |
| TACGTCGGAAACATGGTTGG+TGG | 0.599597 | 5.3:-15239082 | MS.gene72746:CDS |
| TCATATATTTGCACTAGCAA+GGG | 0.601119 | 5.3:-15238542 | MS.gene72746:CDS |
| CAGGATCAACTGTTGGTGGA+GGG | 0.603150 | 5.3:-15239398 | MS.gene72746:CDS |
| GTAGTTGGTTCCGGCTCAGG+AGG | 0.605970 | 5.3:-15239591 | MS.gene72746:CDS |
| ATTCTCGATTGTCATGCCGT+GGG | 0.607267 | 5.3:-15238614 | MS.gene72746:CDS |
| ATATCGCTTCCAGAAACCCA+CGG | 0.609845 | 5.3:+15238598 | None:intergenic |
| TGAAAAGACTGCGCGAGGAG+TGG | 0.613133 | 5.3:-15238977 | MS.gene72746:CDS |
| CAGTCCGAGATAGAAGAGGA+AGG | 0.614726 | 5.3:-15239237 | MS.gene72746:CDS |
| ACTTTCATCGCTGTACAACC+GGG | 0.614738 | 5.3:+15239027 | None:intergenic |
| TTATCAGGATCAACTGTTGG+TGG | 0.614893 | 5.3:-15239402 | MS.gene72746:CDS |
| GATTGGAACTCATCATAACA+AGG | 0.615247 | 5.3:-15238392 | MS.gene72746:CDS |
| ATCTAATCCGAAGGAATCGG+TGG | 0.618083 | 5.3:-15238236 | MS.gene72746:CDS |
| AGAACCTACAGATGCATCTG+AGG | 0.620936 | 5.3:-15238764 | MS.gene72746:CDS |
| TGTGCTCGGCACATCAGATG+GGG | 0.623299 | 5.3:-15238273 | MS.gene72746:CDS |
| TAGGTTCTGCAGGTGCATCA+GGG | 0.624788 | 5.3:+15238779 | None:intergenic |
| AGTTCCAATCTCTTCAGCGC+CGG | 0.626568 | 5.3:+15238405 | None:intergenic |
| TGGAAAGCAATTGGATACTG+TGG | 0.629782 | 5.3:-15239879 | MS.gene72746:CDS |
| AGTTCAGTCCGAGATAGAAG+AGG | 0.634786 | 5.3:-15239241 | MS.gene72746:CDS |
| CTACAGATGCATCTGAGGTG+TGG | 0.635428 | 5.3:-15238759 | MS.gene72746:CDS |
| AAGGTCACAATTGTAGCTTG+TGG | 0.638940 | 5.3:-15238904 | MS.gene72746:CDS |
| AGTGGTGAAAAGACTGCGCG+AGG | 0.639721 | 5.3:-15238982 | MS.gene72746:CDS |
| GCATTTGAATTTGAATACAG+AGG | 0.641551 | 5.3:-15238955 | MS.gene72746:CDS |
| GGGTACGTCGGAAACATGGT+TGG | 0.644062 | 5.3:-15239085 | MS.gene72746:CDS |
| TTGTTAAAGAGGAAAGCTCA+AGG | 0.645315 | 5.3:-15238321 | MS.gene72746:CDS |
| TCGGATGGGATCTAATCCGA+AGG | 0.649402 | 5.3:-15238245 | MS.gene72746:CDS |
| TTCGACGGGTAACCGAGACA+GGG | 0.655689 | 5.3:+15239673 | None:intergenic |
| AGTTATACAATGTGACGCTG+TGG | 0.659608 | 5.3:-15239613 | MS.gene72746:CDS |
| AAACTTGCATCTTCATCCAG+TGG | 0.660254 | 5.3:-15238821 | MS.gene72746:CDS |
| CACACCTCAGATGCATCTGT+AGG | 0.661003 | 5.3:+15238760 | None:intergenic |
| CTCAGCATGTGTGCAAAGAG+TGG | 0.664906 | 5.3:-15239341 | MS.gene72746:CDS |
| ATTGGAACTCATCATAACAA+GGG | 0.666601 | 5.3:-15238391 | MS.gene72746:CDS |
| ATCGGTGGTGAAGGAGACAG+GGG | 0.669474 | 5.3:-15238221 | MS.gene72746:CDS |
| GATGATGCTGAACAAGCCAT+AGG | 0.683975 | 5.3:-15239771 | MS.gene72746:CDS |
| CTTGGTGAAATCTGGCAATG+GGG | 0.686289 | 5.3:-15239058 | MS.gene72746:CDS |
| ATCTGATGTGCCGAGCACAA+AGG | 0.687383 | 5.3:+15238277 | None:intergenic |
| GATCAAATGTACCAATCTGG+CGG | 0.687871 | 5.3:-15239459 | MS.gene72746:CDS |
| TGGAAAGAAGAAGGGTACGT+CGG | 0.696204 | 5.3:-15239097 | MS.gene72746:CDS |
| GCTTCGTCTGATCACTACTG+TGG | 0.711953 | 5.3:-15239144 | MS.gene72746:CDS |
| AGGAAGTAAAGACATTTGCG+TGG | 0.724982 | 5.3:-15238935 | MS.gene72746:CDS |
| TGAGAAATCAGGATACGGTG+CGG | 0.743954 | 5.3:-15238668 | MS.gene72746:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATTAAAAAATAACAACATA+GGG | - | chr5.3:15239647-15239666 | MS.gene72746:CDS | 15.0% |
| !!! | ACAAGATTTTATTTTTTGTT+AGG | - | chr5.3:15238521-15238540 | MS.gene72746:CDS | 15.0% |
| !! | AAAAATTTAAATGACCCTAT+TGG | - | chr5.3:15238461-15238480 | MS.gene72746:CDS | 20.0% |
| !! | AAAATTTAAATGACCCTATT+GGG | - | chr5.3:15238462-15238481 | MS.gene72746:CDS | 20.0% |
| !! | ATGAATATCTTCATATTATC+AGG | - | chr5.3:15239076-15239095 | MS.gene72746:CDS | 20.0% |
| !! | GGATTAAAAAATAACAACAT+AGG | - | chr5.3:15239646-15239665 | MS.gene72746:CDS | 20.0% |
| !!! | TTAAAGAACCATTTTTTACA+TGG | - | chr5.3:15238662-15238681 | MS.gene72746:CDS | 20.0% |
| ! | AAGTCGTATAAGTTATGAAA+TGG | - | chr5.3:15240002-15240021 | MS.gene72746:intron | 25.0% |
| ! | ATTTAAATATTCCAGTGACT+TGG | - | chr5.3:15238390-15238409 | MS.gene72746:CDS | 25.0% |
| ! | ATTTCATAACTTATACGACT+TGG | + | chr5.3:15240003-15240022 | None:intergenic | 25.0% |
| ! | TAAAGAAAAACAAGATTCTG+AGG | - | chr5.3:15238691-15238710 | MS.gene72746:CDS | 25.0% |
| ! | TAAATATCAGCATGTTATGT+TGG | + | chr5.3:15238282-15238301 | None:intergenic | 25.0% |
| ! | TAACAAATTGCTCAAATTCA+TGG | + | chr5.3:15240158-15240177 | None:intergenic | 25.0% |
| ! | TACATGTTCCATGTAAAAAA+TGG | + | chr5.3:15238673-15238692 | None:intergenic | 25.0% |
| ! | TCACATTGTATAACTAAAGA+AGG | + | chr5.3:15238875-15238894 | None:intergenic | 25.0% |
| !! | AGTTCTATGATTTTATGACT+TGG | - | chr5.3:15238341-15238360 | MS.gene72746:CDS | 25.0% |
| !! | GTTTTGCATAAGAAAAAGAA+AGG | - | chr5.3:15239487-15239506 | MS.gene72746:CDS | 25.0% |
| !!! | ACAAAAGCACATTTTGTTTT+TGG | - | chr5.3:15238178-15238197 | MS.gene72746:CDS | 25.0% |
| !!! | ACATCATGTGTTTTGATATA+CGG | + | chr5.3:15238148-15238167 | None:intergenic | 25.0% |
| !!! | ATTTGAGCAATTTGTTAAAG+AGG | - | chr5.3:15240161-15240180 | MS.gene72746:intron | 25.0% |
| AACAATCTTTCTCTTCTTGA+AGG | - | chr5.3:15239001-15239020 | MS.gene72746:CDS | 30.0% | |
| AATCAGAAGACAATTGTTCA+TGG | - | chr5.3:15238594-15238613 | MS.gene72746:CDS | 30.0% | |
| AATTGTTCATGGAAAGCAAT+TGG | - | chr5.3:15238605-15238624 | MS.gene72746:CDS | 30.0% | |
| AGAGTTAAAGCTTATGTTTG+TGG | + | chr5.3:15238103-15238122 | None:intergenic | 30.0% | |
| ATATTATCAGGATCAACTGT+TGG | - | chr5.3:15239088-15239107 | MS.gene72746:CDS | 30.0% | |
| ATTGATTGAACAGTGATCAT+TGG | + | chr5.3:15240366-15240385 | None:intergenic | 30.0% | |
| ATTGGAACTCATCATAACAA+GGG | - | chr5.3:15240102-15240121 | MS.gene72746:intron | 30.0% | |
| CATAAGAAAAAGAAAGGAAG+TGG | - | chr5.3:15239493-15239512 | MS.gene72746:CDS | 30.0% | |
| GATGAAGAGAATTTACAGAA+GGG | - | chr5.3:15240033-15240052 | MS.gene72746:intron | 30.0% | |
| GCATTTGAATTTGAATACAG+AGG | - | chr5.3:15239538-15239557 | MS.gene72746:CDS | 30.0% | |
| TAAATCTTGTAAGCCCAATA+GGG | + | chr5.3:15238478-15238497 | None:intergenic | 30.0% | |
| TCATATATTTGCACTAGCAA+GGG | - | chr5.3:15239951-15239970 | MS.gene72746:intron | 30.0% | |
| TCATTACTTGAACCATAACT+TGG | - | chr5.3:15238429-15238448 | MS.gene72746:CDS | 30.0% | |
| TGATGAAGAGAATTTACAGA+AGG | - | chr5.3:15240032-15240051 | MS.gene72746:intron | 30.0% | |
| TTTACAGAAGGGAATTGATA+AGG | - | chr5.3:15240044-15240063 | MS.gene72746:intron | 30.0% | |
| TTTCTTGCATAACCAAGTTA+TGG | + | chr5.3:15238444-15238463 | None:intergenic | 30.0% | |
| ! | AAACATAAGCTTTAACTCTC+CGG | - | chr5.3:15238104-15238123 | MS.gene72746:CDS | 30.0% |
| !! | TTGGTTCGAAAAAACACTTT+TGG | - | chr5.3:15238197-15238216 | MS.gene72746:CDS | 30.0% |
| !! | TTTAACTGAGCTTTGAATTC+TGG | + | chr5.3:15238647-15238666 | None:intergenic | 30.0% |
| AAAGAAGGAGATGATAAGCT+TGG | + | chr5.3:15238860-15238879 | None:intergenic | 35.0% | |
| AAAGCTTATGTTTGTGGCTT+TGG | + | chr5.3:15238097-15238116 | None:intergenic | 35.0% | |
| ACTCGCGTTCTTTACATTTA+AGG | + | chr5.3:15240133-15240152 | None:intergenic | 35.0% | |
| ATGGATCAAATGTACCAATC+TGG | - | chr5.3:15239031-15239050 | MS.gene72746:CDS | 35.0% | |
| ATGTAAGGATGGAAAGAAGA+AGG | - | chr5.3:15239387-15239406 | MS.gene72746:CDS | 35.0% | |
| ATTGCATGACACTTACTTTC+AGG | - | chr5.3:15238565-15238584 | MS.gene72746:CDS | 35.0% | |
| CAAAACCAACACTTTGTAAC+CGG | + | chr5.3:15238957-15238976 | None:intergenic | 35.0% | |
| CATGCAATGATGAGTACAAT+AGG | + | chr5.3:15238553-15238572 | None:intergenic | 35.0% | |
| CCATCATTGCTTAAAAGAAG+CGG | - | chr5.3:15239625-15239644 | MS.gene72746:CDS | 35.0% | |
| CGAATTGTATCAAGAAGCTA+TGG | - | chr5.3:15239207-15239226 | MS.gene72746:CDS | 35.0% | |
| CTAAATCTTGTAAGCCCAAT+AGG | + | chr5.3:15238479-15238498 | None:intergenic | 35.0% | |
| CTCATATATTTGCACTAGCA+AGG | - | chr5.3:15239950-15239969 | MS.gene72746:intron | 35.0% | |
| GAGTTTGAGAAATCAGGATA+CGG | - | chr5.3:15239820-15239839 | MS.gene72746:CDS | 35.0% | |
| GATTGGAACTCATCATAACA+AGG | - | chr5.3:15240101-15240120 | MS.gene72746:intron | 35.0% | |
| TGGTACATTTGATCCATTGT+TGG | + | chr5.3:15239028-15239047 | None:intergenic | 35.0% | |
| TGTAAGGATGGAAAGAAGAA+GGG | - | chr5.3:15239388-15239407 | MS.gene72746:CDS | 35.0% | |
| TTCCTTGGAATGTTATTCAC+CGG | + | chr5.3:15239328-15239347 | None:intergenic | 35.0% | |
| TTGTTAAAGAGGAAAGCTCA+AGG | - | chr5.3:15240172-15240191 | MS.gene72746:intron | 35.0% | |
| ! | AACAACGCAATTTTGCGAAA+AGG | - | chr5.3:15239283-15239302 | MS.gene72746:CDS | 35.0% |
| ! | AACATAAGCTTTAACTCTCC+GGG | - | chr5.3:15238105-15238124 | MS.gene72746:CDS | 35.0% |
| ! | ACAACGCAATTTTGCGAAAA+GGG | - | chr5.3:15239284-15239303 | MS.gene72746:CDS | 35.0% |
| ! | GAAAAACAAGATTCTGAGGA+AGG | - | chr5.3:15238695-15238714 | MS.gene72746:CDS | 35.0% |
| !! | TGATAAGGTACTGAGAATTC+TGG | - | chr5.3:15240059-15240078 | MS.gene72746:intron | 35.0% |
| !!! | AAAGTGTTGGTTTTGGAGAA+AGG | - | chr5.3:15238962-15238981 | MS.gene72746:CDS | 35.0% |
| !!! | AACACTTTTGGAATCATGCA+TGG | - | chr5.3:15238209-15238228 | MS.gene72746:CDS | 35.0% |
| AAACTTGCATCTTCATCCAG+TGG | - | chr5.3:15239672-15239691 | MS.gene72746:CDS | 40.0% | |
| AAAGAGTGGTGCGAAAAACA+CGG | - | chr5.3:15239166-15239185 | MS.gene72746:CDS | 40.0% | |
| AACTTTCATCGCTGTACAAC+CGG | + | chr5.3:15239470-15239489 | None:intergenic | 40.0% | |
| AAGGTCACAATTGTAGCTTG+TGG | - | chr5.3:15239589-15239608 | MS.gene72746:CDS | 40.0% | |
| ACAAGCTACAATTGTGACCT+TGG | + | chr5.3:15239590-15239609 | None:intergenic | 40.0% | |
| ACATGGAAAAAGAGCTACGA+AGG | - | chr5.3:15239763-15239782 | MS.gene72746:CDS | 40.0% | |
| AGGAAGTAAAGACATTTGCG+TGG | - | chr5.3:15239558-15239577 | MS.gene72746:CDS | 40.0% | |
| AGTTATACAATGTGACGCTG+TGG | - | chr5.3:15238880-15238899 | MS.gene72746:CDS | 40.0% | |
| ATCCGGTGAATAACATTCCA+AGG | - | chr5.3:15239323-15239342 | MS.gene72746:CDS | 40.0% | |
| ATGACAATCGAGAATGTACC+GGG | + | chr5.3:15239874-15239893 | None:intergenic | 40.0% | |
| CATGACAATCGAGAATGTAC+CGG | + | chr5.3:15239875-15239894 | None:intergenic | 40.0% | |
| CCATAGGACCTCTTTACAAA+GGG | - | chr5.3:15238738-15238757 | MS.gene72746:CDS | 40.0% | |
| GAAACCTTCCTCTTCTATCT+CGG | + | chr5.3:15239263-15239282 | None:intergenic | 40.0% | |
| GAAGCTGTTTGCGAGAAAAT+GGG | - | chr5.3:15239229-15239248 | MS.gene72746:CDS | 40.0% | |
| GATCAAATGTACCAATCTGG+CGG | - | chr5.3:15239034-15239053 | MS.gene72746:CDS | 40.0% | |
| GTGTCAAGAAATGGGATATC+CGG | - | chr5.3:15239306-15239325 | MS.gene72746:CDS | 40.0% | |
| GTTGCAGAGTTTGAGAAATC+AGG | - | chr5.3:15239814-15239833 | MS.gene72746:CDS | 40.0% | |
| TCTTCTTGAAGGACCAACAA+TGG | - | chr5.3:15239012-15239031 | MS.gene72746:CDS | 40.0% | |
| TGGAAAGCAATTGGATACTG+TGG | - | chr5.3:15238614-15238633 | MS.gene72746:CDS | 40.0% | |
| TTATCAGGATCAACTGTTGG+TGG | - | chr5.3:15239091-15239110 | MS.gene72746:CDS | 40.0% | |
| TTCTCAAACTCTGCAACAAC+AGG | + | chr5.3:15239811-15239830 | None:intergenic | 40.0% | |
| ! | AAATGCCGGTTACAAAGTGT+TGG | - | chr5.3:15238949-15238968 | MS.gene72746:CDS | 40.0% |
| ! | ACTTGGTGAAATCTGGCAAT+GGG | - | chr5.3:15239434-15239453 | MS.gene72746:CDS | 40.0% |
| ! | AGCAGTTTTCTGTTTTCGAC+GGG | + | chr5.3:15238837-15238856 | None:intergenic | 40.0% |
| ! | CCGCTTCTTTTAAGCAATGA+TGG | + | chr5.3:15239628-15239647 | None:intergenic | 40.0% |
| ! | GAGCAGTTTTCTGTTTTCGA+CGG | + | chr5.3:15238838-15238857 | None:intergenic | 40.0% |
| ! | GTAGCTCTTTTTCCATGTCT+CGG | + | chr5.3:15239761-15239780 | None:intergenic | 40.0% |
| ! | TAGCTCTTTTTCCATGTCTC+GGG | + | chr5.3:15239760-15239779 | None:intergenic | 40.0% |
| !! | CAGTTCTTCAGGTTCTGAAA+AGG | - | chr5.3:15240406-15240425 | MS.gene72746:intron | 40.0% |
| !! | CGAAAAGGGTGTCAAGAAAT+GGG | - | chr5.3:15239298-15239317 | MS.gene72746:CDS | 40.0% |
| !! | TGAGCTTTGAATTCTGGATC+AGG | + | chr5.3:15238641-15238660 | None:intergenic | 40.0% |
| !!! | CGGTTACAAAGTGTTGGTTT+TGG | - | chr5.3:15238955-15238974 | MS.gene72746:CDS | 40.0% |
| !!! | TGTTGGTTTTGGAGAAAGGA+GGG | - | chr5.3:15238966-15238985 | MS.gene72746:CDS | 40.0% |
| AAGAGTGGTGCGAAAAACAC+GGG | - | chr5.3:15239167-15239186 | MS.gene72746:CDS | 45.0% | |
| AAGTGTCTTTCCTACAGCGT+TGG | - | chr5.3:15240332-15240351 | MS.gene72746:intron | 45.0% | |
| AATGTACCAATCTGGCGGTT+TGG | - | chr5.3:15239039-15239058 | MS.gene72746:CDS | 45.0% | |
| ACTAGCAAGGGATCAAGGAT+CGG | - | chr5.3:15239963-15239982 | MS.gene72746:intron | 45.0% | |
| ACTTTCATCGCTGTACAACC+GGG | + | chr5.3:15239469-15239488 | None:intergenic | 45.0% | |
| AGAACCTACAGATGCATCTG+AGG | - | chr5.3:15239729-15239748 | MS.gene72746:CDS | 45.0% | |
| AGTGTCTTTCCTACAGCGTT+GGG | - | chr5.3:15240333-15240352 | MS.gene72746:intron | 45.0% | |
| AGTTCAGTCCGAGATAGAAG+AGG | - | chr5.3:15239252-15239271 | MS.gene72746:CDS | 45.0% | |
| ATAGACTGAGACCAAGTCAC+TGG | + | chr5.3:15238404-15238423 | None:intergenic | 45.0% | |
| ATATCGCTTCCAGAAACCCA+CGG | + | chr5.3:15239898-15239917 | None:intergenic | 45.0% | |
| ATCTAATCCGAAGGAATCGG+TGG | - | chr5.3:15240257-15240276 | MS.gene72746:intron | 45.0% | |
| ATTCTCGATTGTCATGCCGT+GGG | - | chr5.3:15239879-15239898 | MS.gene72746:CDS | 45.0% | |
| CACTGCACAATCAGTTCTTC+AGG | - | chr5.3:15240395-15240414 | MS.gene72746:intron | 45.0% | |
| CCCTTTGTAAAGAGGTCCTA+TGG | + | chr5.3:15238741-15238760 | None:intergenic | 45.0% | |
| CTTGGTGAAATCTGGCAATG+GGG | - | chr5.3:15239435-15239454 | MS.gene72746:CDS | 45.0% | |
| GATGATGCTGAACAAGCCAT+AGG | - | chr5.3:15238722-15238741 | MS.gene72746:CDS | 45.0% | |
| GCATCTTCATCCAGTGGTAA+TGG | - | chr5.3:15239678-15239697 | MS.gene72746:CDS | 45.0% | |
| GCCATAGGACCTCTTTACAA+AGG | - | chr5.3:15238737-15238756 | MS.gene72746:CDS | 45.0% | |
| GGAAAAAGAGCTACGAAGGA+GGG | - | chr5.3:15239767-15239786 | MS.gene72746:CDS | 45.0% | |
| GGAAGCTGTTTGCGAGAAAA+TGG | - | chr5.3:15239228-15239247 | MS.gene72746:CDS | 45.0% | |
| GGGATCTAATCCGAAGGAAT+CGG | - | chr5.3:15240254-15240273 | MS.gene72746:intron | 45.0% | |
| TGAGAAATCAGGATACGGTG+CGG | - | chr5.3:15239825-15239844 | MS.gene72746:CDS | 45.0% | |
| TGGAAAAAGAGCTACGAAGG+AGG | - | chr5.3:15239766-15239785 | MS.gene72746:CDS | 45.0% | |
| TGGACAAGCCCTTTGTAAAG+AGG | + | chr5.3:15238749-15238768 | None:intergenic | 45.0% | |
| TGTCTCTCGGATAGTTGAGA+TGG | + | chr5.3:15238769-15238788 | None:intergenic | 45.0% | |
| TTTGCACTAGCAAGGGATCA+AGG | - | chr5.3:15239958-15239977 | MS.gene72746:intron | 45.0% | |
| ! | ACGATTTGGATTCCCTGTCT+CGG | - | chr5.3:15238808-15238827 | MS.gene72746:CDS | 45.0% |
| ! | GGAAGTGGAGGATCTTTTTG+TGG | - | chr5.3:15240302-15240321 | MS.gene72746:intron | 45.0% |
| ! | TGATCAGACGAAGCATTCCT+TGG | + | chr5.3:15239343-15239362 | None:intergenic | 45.0% |
| ! | TGCTGTTTGGGATGTAAGGA+TGG | - | chr5.3:15239376-15239395 | MS.gene72746:CDS | 45.0% |
| ! | TGGAAAGAAGAAGGGTACGT+CGG | - | chr5.3:15239396-15239415 | MS.gene72746:CDS | 45.0% |
| !! | AGAAAGGAGGGTATTCAGCT+AGG | - | chr5.3:15238978-15238997 | MS.gene72746:CDS | 45.0% |
| !! | ATGGTGCTGTTTGGGATGTA+AGG | - | chr5.3:15239372-15239391 | MS.gene72746:CDS | 45.0% |
| !! | GACTTGGTGAAATCTGGCAA+TGG | - | chr5.3:15239433-15239452 | MS.gene72746:CDS | 45.0% |
| !! | GCGAAAAGGGTGTCAAGAAA+TGG | - | chr5.3:15239297-15239316 | MS.gene72746:CDS | 45.0% |
| !! | GTCGACACTCTAAGACGATT+TGG | - | chr5.3:15238794-15238813 | MS.gene72746:CDS | 45.0% |
| !! | TACTGTGGATGGTGCTGTTT+GGG | - | chr5.3:15239364-15239383 | MS.gene72746:CDS | 45.0% |
| !! | TTGGTGGACTTGGTGAAATC+TGG | - | chr5.3:15239427-15239446 | MS.gene72746:CDS | 45.0% |
| !!! | GTGTTGGTTTTGGAGAAAGG+AGG | - | chr5.3:15238965-15238984 | MS.gene72746:CDS | 45.0% |
| AATCGGTGGTGAAGGAGACA+GGG | - | chr5.3:15240271-15240290 | MS.gene72746:intron | 50.0% | |
| AATGTACCGGGATGCAATGC+AGG | + | chr5.3:15239862-15239881 | None:intergenic | 50.0% | |
| ACCGGCATTTGCCAGAATTC+CGG | + | chr5.3:15238939-15238958 | None:intergenic | 50.0% | |
| AGTTCCAATCTCTTCAGCGC+CGG | + | chr5.3:15240091-15240110 | None:intergenic | 50.0% | |
| ATCTGATGTGCCGAGCACAA+AGG | + | chr5.3:15240219-15240238 | None:intergenic | 50.0% | |
| ATTGTCATGCCGTGGGTTTC+TGG | - | chr5.3:15239886-15239905 | MS.gene72746:CDS | 50.0% | |
| CAAACACCTGCATTGCATCC+CGG | - | chr5.3:15239853-15239872 | MS.gene72746:CDS | 50.0% | |
| CAATGTGACGCTGTGGTAGT+TGG | - | chr5.3:15238887-15238906 | MS.gene72746:CDS | 50.0% | |
| CACACCTCAGATGCATCTGT+AGG | + | chr5.3:15239736-15239755 | None:intergenic | 50.0% | |
| CACTCTTTGCACACATGCTG+AGG | + | chr5.3:15239154-15239173 | None:intergenic | 50.0% | |
| CAGTCCGAGATAGAAGAGGA+AGG | - | chr5.3:15239256-15239275 | MS.gene72746:CDS | 50.0% | |
| CATTCTCGATTGTCATGCCG+TGG | - | chr5.3:15239878-15239897 | MS.gene72746:CDS | 50.0% | |
| CATTTGCGTGGTCGAATCCA+AGG | - | chr5.3:15239570-15239589 | MS.gene72746:CDS | 50.0% | |
| CGTCTGATCACTACTGTGGA+TGG | - | chr5.3:15239353-15239372 | MS.gene72746:CDS | 50.0% | |
| CTAGCAAGGGATCAAGGATC+GGG | - | chr5.3:15239964-15239983 | MS.gene72746:intron | 50.0% | |
| CTCAGCATGTGTGCAAAGAG+TGG | - | chr5.3:15239152-15239171 | MS.gene72746:CDS | 50.0% | |
| GATGCATCTGTAGGTTCTGC+AGG | + | chr5.3:15239727-15239746 | None:intergenic | 50.0% | |
| GCTTCGTCTGATCACTACTG+TGG | - | chr5.3:15239349-15239368 | MS.gene72746:CDS | 50.0% | |
| GTGAAATGTCCTTCAACGCC+CGG | + | chr5.3:15238126-15238145 | None:intergenic | 50.0% | |
| GTGGAGGGTCTGCAATCAAT+TGG | - | chr5.3:15239110-15239129 | MS.gene72746:CDS | 50.0% | |
| TACGTCGGAAACATGGTTGG+TGG | - | chr5.3:15239411-15239430 | MS.gene72746:CDS | 50.0% | |
| TAGGTTCTGCAGGTGCATCA+GGG | + | chr5.3:15239717-15239736 | None:intergenic | 50.0% | |
| TCGGATGGGATCTAATCCGA+AGG | - | chr5.3:15240248-15240267 | MS.gene72746:intron | 50.0% | |
| TGGAGTTGTAGCCGGAATTC+TGG | - | chr5.3:15238925-15238944 | MS.gene72746:CDS | 50.0% | |
| TTGCAACCAAACCGCCAGAT+TGG | + | chr5.3:15239048-15239067 | None:intergenic | 50.0% | |
| TTGTGCTCGGCACATCAGAT+GGG | - | chr5.3:15240219-15240238 | MS.gene72746:intron | 50.0% | |
| TTTGTGCTCGGCACATCAGA+TGG | - | chr5.3:15240218-15240237 | MS.gene72746:intron | 50.0% | |
| ! | AGAAGGGTACGTCGGAAACA+TGG | - | chr5.3:15239404-15239423 | MS.gene72746:CDS | 50.0% |
| ! | CACATCAGATGGGGTCTTGT+CGG | - | chr5.3:15240229-15240248 | MS.gene72746:intron | 50.0% |
| ! | CAGGATCAACTGTTGGTGGA+GGG | - | chr5.3:15239095-15239114 | MS.gene72746:CDS | 50.0% |
| ! | CTACAGATGCATCTGAGGTG+TGG | - | chr5.3:15239734-15239753 | MS.gene72746:CDS | 50.0% |
| ! | GTGTCGACAGTGATGTCTCT+CGG | + | chr5.3:15238782-15238801 | None:intergenic | 50.0% |
| ! | TCAGGATCAACTGTTGGTGG+AGG | - | chr5.3:15239094-15239113 | MS.gene72746:CDS | 50.0% |
| !! | CTACTGTGGATGGTGCTGTT+TGG | - | chr5.3:15239363-15239382 | MS.gene72746:CDS | 50.0% |
| !! | GGAAACATGGTTGGTGGACT+TGG | - | chr5.3:15239417-15239436 | MS.gene72746:CDS | 50.0% |
| !! | TCATCCAGTGGTAATGGCCT+GGG | - | chr5.3:15239684-15239703 | MS.gene72746:CDS | 50.0% |
| !! | TCCTTCACCACCGATTCCTT+CGG | + | chr5.3:15240267-15240286 | None:intergenic | 50.0% |
| !! | TTCATCCAGTGGTAATGGCC+TGG | - | chr5.3:15239683-15239702 | MS.gene72746:CDS | 50.0% |
| !! | TTTAACTCTCCGGGCGTTGA+AGG | - | chr5.3:15238114-15238133 | MS.gene72746:CDS | 50.0% |
| AGTGGTGAAAAGACTGCGCG+AGG | - | chr5.3:15239511-15239530 | MS.gene72746:CDS | 55.0% | |
| ATCGGTGGTGAAGGAGACAG+GGG | - | chr5.3:15240272-15240291 | MS.gene72746:intron | 55.0% | |
| CCTTTCGACGCCTTTGTGCT+CGG | - | chr5.3:15240206-15240225 | MS.gene72746:intron | 55.0% | |
| CGGGATGCAATGCAGGTGTT+TGG | + | chr5.3:15239855-15239874 | None:intergenic | 55.0% | |
| GAAGGAGACAGGGGAGACAT+GGG | - | chr5.3:15240281-15240300 | MS.gene72746:intron | 55.0% | |
| GAATCGGTGGTGAAGGAGAC+AGG | - | chr5.3:15240270-15240289 | MS.gene72746:intron | 55.0% | |
| GCCGGAATTCTGGCAAATGC+CGG | - | chr5.3:15238935-15238954 | MS.gene72746:CDS | 55.0% | |
| GGGTACGTCGGAAACATGGT+TGG | - | chr5.3:15239408-15239427 | MS.gene72746:CDS | 55.0% | |
| GTAGGTTCTGCAGGTGCATC+AGG | + | chr5.3:15239718-15239737 | None:intergenic | 55.0% | |
| TACAACTCCACCTCCTGAGC+CGG | + | chr5.3:15238915-15238934 | None:intergenic | 55.0% | |
| TCAGGAGGTGGAGTTGTAGC+CGG | - | chr5.3:15238917-15238936 | MS.gene72746:CDS | 55.0% | |
| TCCGAAGGAATCGGTGGTGA+AGG | - | chr5.3:15240263-15240282 | MS.gene72746:intron | 55.0% | |
| TGAAAAGACTGCGCGAGGAG+TGG | - | chr5.3:15239516-15239535 | MS.gene72746:CDS | 55.0% | |
| TGAAGGAGACAGGGGAGACA+TGG | - | chr5.3:15240280-15240299 | MS.gene72746:intron | 55.0% | |
| TGTGCTCGGCACATCAGATG+GGG | - | chr5.3:15240220-15240239 | MS.gene72746:intron | 55.0% | |
| TTCGACGGGTAACCGAGACA+GGG | + | chr5.3:15238823-15238842 | None:intergenic | 55.0% | |
| TTTCGACGGGTAACCGAGAC+AGG | + | chr5.3:15238824-15238843 | None:intergenic | 55.0% | |
| ! | CAGATGGGGTCTTGTCGGAT+GGG | - | chr5.3:15240234-15240253 | MS.gene72746:intron | 55.0% |
| ! | CTGAGAATTCTGGCTGCAGC+CGG | - | chr5.3:15240069-15240088 | MS.gene72746:intron | 55.0% |
| ! | GACGCTGTGGTAGTTGGTTC+CGG | - | chr5.3:15238893-15238912 | MS.gene72746:CDS | 55.0% |
| ! | TCAGATGGGGTCTTGTCGGA+TGG | - | chr5.3:15240233-15240252 | MS.gene72746:intron | 55.0% |
| !! | CATCCAGTGGTAATGGCCTG+GGG | - | chr5.3:15239685-15239704 | MS.gene72746:CDS | 55.0% |
| AGGGGAGACATGGGAAGTGG+AGG | - | chr5.3:15240290-15240309 | MS.gene72746:intron | 60.0% | |
| GACAGGGGAGACATGGGAAG+TGG | - | chr5.3:15240287-15240306 | MS.gene72746:intron | 60.0% | |
| GGATTCACGCCCAACGCTGT+AGG | + | chr5.3:15240345-15240364 | None:intergenic | 60.0% | |
| GGCAATGGGGCGATTCTTCC+CGG | - | chr5.3:15239448-15239467 | MS.gene72746:CDS | 60.0% | |
| TAGCCCCAGGCCATTACCAC+TGG | + | chr5.3:15239691-15239710 | None:intergenic | 60.0% | |
| TGCATCAGGGAAGTAGCCCC+AGG | + | chr5.3:15239704-15239723 | None:intergenic | 60.0% | |
| ! | GTAGTTGGTTCCGGCTCAGG+AGG | - | chr5.3:15238902-15238921 | MS.gene72746:CDS | 60.0% |
| ! | GTGGTAGTTGGTTCCGGCTC+AGG | - | chr5.3:15238899-15238918 | MS.gene72746:CDS | 60.0% |
| !! | CCGAGCACAAAGGCGTCGAA+AGG | + | chr5.3:15240209-15240228 | None:intergenic | 60.0% |
| CTGAGGTGTGGCCCGAGACA+TGG | - | chr5.3:15239746-15239765 | MS.gene72746:CDS | 65.0% | |
| ! | GCAGCCGGCGCTGAAGAGAT+TGG | - | chr5.3:15240084-15240103 | MS.gene72746:intron | 65.0% |
| ! | GTTGGTTCCGGCTCAGGAGG+TGG | - | chr5.3:15238905-15238924 | MS.gene72746:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 15238072 | 15240443 | 15238072 | ID=MS.gene72746 |
| chr5.3 | mRNA | 15238072 | 15240443 | 15238072 | ID=MS.gene72746.t1;Parent=MS.gene72746 |
| chr5.3 | exon | 15240441 | 15240443 | 15240441 | ID=MS.gene72746.t1.exon1;Parent=MS.gene72746.t1 |
| chr5.3 | CDS | 15240441 | 15240443 | 15240441 | ID=cds.MS.gene72746.t1;Parent=MS.gene72746.t1 |
| chr5.3 | exon | 15238072 | 15239928 | 15238072 | ID=MS.gene72746.t1.exon2;Parent=MS.gene72746.t1 |
| chr5.3 | CDS | 15238072 | 15239928 | 15238072 | ID=cds.MS.gene72746.t1;Parent=MS.gene72746.t1 |
| Gene Sequence |
| Protein sequence |
