Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82942.t1 | XP_003629014.1 | 91.2 | 617 | 34 | 1 | 4 | 600 | 194 | 810 | 0.00E+00 | 1125.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82942.t1 | O65709 | 58.4 | 618 | 216 | 6 | 4 | 600 | 129 | 726 | 3.2e-200 | 699.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82942.t1 | G7L7T8 | 91.2 | 617 | 34 | 1 | 4 | 600 | 194 | 810 | 0.0e+00 | 1125.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene96835 | MS.gene82942 | PPI |
| MS.gene82942 | MS.gene031564 | PPI |
| MS.gene82942 | MS.gene006743 | PPI |
| MS.gene82942 | MS.gene045420 | PPI |
| MS.gene71426 | MS.gene82942 | PPI |
| MS.gene82942 | MS.gene004828 | PPI |
| MS.gene82942 | MS.gene045422 | PPI |
| MS.gene82942 | MS.gene006744 | PPI |
| MS.gene82942 | MS.gene031565 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82942.t1 | MTR_8g072210 | 91.248 | 617 | 34 | 1 | 4 | 600 | 194 | 810 | 0.0 | 1121 |
| MS.gene82942.t1 | MTR_5g025650 | 74.116 | 622 | 135 | 4 | 4 | 600 | 209 | 829 | 0.0 | 913 |
| MS.gene82942.t1 | MTR_4g080890 | 42.496 | 633 | 288 | 13 | 4 | 600 | 160 | 752 | 1.75e-148 | 447 |
| MS.gene82942.t1 | MTR_4g080823 | 41.864 | 633 | 288 | 13 | 4 | 598 | 169 | 759 | 6.83e-147 | 443 |
| MS.gene82942.t1 | MTR_7g097210 | 43.440 | 564 | 275 | 9 | 63 | 599 | 21 | 567 | 2.71e-142 | 424 |
| MS.gene82942.t1 | MTR_7g097210 | 41.519 | 619 | 292 | 11 | 8 | 599 | 162 | 737 | 9.87e-141 | 426 |
| MS.gene82942.t1 | MTR_1g075650 | 39.384 | 617 | 266 | 14 | 10 | 599 | 3 | 538 | 2.83e-139 | 416 |
| MS.gene82942.t1 | MTR_0651s0010 | 42.293 | 532 | 236 | 10 | 4 | 504 | 160 | 651 | 1.37e-116 | 361 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82942.t1 | AT4G19380 | 58.252 | 618 | 217 | 6 | 4 | 600 | 171 | 768 | 0.0 | 674 |
| MS.gene82942.t1 | AT4G19380 | 58.252 | 618 | 217 | 6 | 4 | 600 | 129 | 726 | 0.0 | 674 |
| MS.gene82942.t1 | AT3G23410 | 42.165 | 619 | 287 | 13 | 5 | 592 | 90 | 668 | 8.29e-141 | 424 |
| MS.gene82942.t1 | AT3G23410 | 42.742 | 620 | 282 | 15 | 5 | 592 | 158 | 736 | 6.59e-140 | 424 |
| MS.gene82942.t1 | AT1G03990 | 39.365 | 630 | 307 | 14 | 4 | 600 | 169 | 756 | 1.33e-136 | 416 |
| MS.gene82942.t1 | AT4G28570 | 40.095 | 631 | 302 | 14 | 4 | 599 | 156 | 745 | 1.38e-132 | 405 |
| MS.gene82942.t1 | AT4G28570 | 40.095 | 631 | 302 | 14 | 4 | 599 | 156 | 745 | 1.38e-132 | 405 |
Find 147 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCGGAACACATAATAATA+AGG | 0.255612 | 8.1:-33259594 | MS.gene82942:CDS |
| GGATGCTGTGTGTGAGAAAA+TGG | 0.272728 | 8.1:-33260455 | MS.gene82942:CDS |
| ATGTTCTTGAAGTTCTTAAA+AGG | 0.282909 | 8.1:-33259289 | MS.gene82942:CDS |
| GTTCTAATGCCGTGGAGTTC+TGG | 0.291629 | 8.1:-33259809 | MS.gene82942:CDS |
| TCAGGAGGTGGCGTGGTTGC+GGG | 0.319997 | 8.1:-33261271 | MS.gene82942:CDS |
| CGAGAAGGTGCTGAGAATTC+TGG | 0.331675 | 8.1:-33259636 | MS.gene82942:CDS |
| TCAGATTCTCTAAGACGATT+TGG | 0.344758 | 8.1:-33261391 | MS.gene82942:CDS |
| CTCAGGAGGTGGCGTGGTTG+CGG | 0.346816 | 8.1:-33261272 | MS.gene82942:CDS |
| CACTCTTTGCATACATGGTT+AGG | 0.349087 | 8.1:+33261037 | None:intergenic |
| AGTGTATTTCCCACAGCATT+AGG | 0.352280 | 8.1:-33259362 | MS.gene82942:CDS |
| GACTTTGACAAAACTGGATA+TGG | 0.354453 | 8.1:-33259875 | MS.gene82942:CDS |
| ACCTGAAAATGAAAGAGTTC+TGG | 0.365992 | 8.1:+33261622 | None:intergenic |
| TCAATTGATGAAGGTGCATC+AGG | 0.366322 | 8.1:+33259968 | None:intergenic |
| GTCGCAGACTTTGACAAAAC+TGG | 0.368116 | 8.1:-33259881 | MS.gene82942:CDS |
| AAGAAAAGGGTGTCAAGAAA+TGG | 0.372300 | 8.1:-33260386 | MS.gene82942:CDS |
| GAATCCAATGGTCACTGTTC+AGG | 0.375492 | 8.1:-33259336 | MS.gene82942:CDS |
| AACCCATCGTGGAAGGCATT+TGG | 0.378690 | 8.1:-33261583 | MS.gene82942:CDS |
| AGAAAAGGGTGTCAAGAAAT+GGG | 0.388619 | 8.1:-33260385 | MS.gene82942:CDS |
| TCATCCAGTGACAATGGCTT+GGG | 0.400822 | 8.1:-33259999 | MS.gene82942:CDS |
| CGGTGATCATGTTGATGAAA+AGG | 0.405268 | 8.1:-33261470 | MS.gene82942:CDS |
| CATTTGCGTGGTCGAGTCTA+AGG | 0.410730 | 8.1:-33260113 | MS.gene82942:CDS |
| AACAATCTTTCCCTTCTTGA+AGG | 0.413844 | 8.1:-33261187 | MS.gene82942:CDS |
| GGAAGTAGAGGGTCTTTATC+TGG | 0.416143 | 8.1:-33259393 | MS.gene82942:CDS |
| CTTCCTCTTCAAACTCAGAT+TGG | 0.418825 | 8.1:+33260428 | None:intergenic |
| AGAAACATGGCTTGTGGACT+TGG | 0.419946 | 8.1:-33260266 | MS.gene82942:CDS |
| CTATTGTGGTTGGTGTTGCT+TGG | 0.420913 | 8.1:-33260320 | MS.gene82942:CDS |
| TATTGTGGTTGGTGTTGCTT+GGG | 0.421364 | 8.1:-33260319 | MS.gene82942:CDS |
| CAATGTGATGCAGTGGTTGT+TGG | 0.422728 | 8.1:-33261301 | MS.gene82942:CDS |
| GCAGCTGAAGCTGAAGAAAT+CGG | 0.426578 | 8.1:-33259611 | MS.gene82942:CDS |
| AATAATGCAATACTAAGAAA+AGG | 0.426947 | 8.1:-33260400 | MS.gene82942:CDS |
| GAATCGGTTGTGAACCAAAC+GGG | 0.429172 | 8.1:-33259425 | MS.gene82942:CDS |
| ATGGTAGAAGCTTTATTCGT+TGG | 0.432524 | 8.1:+33261346 | None:intergenic |
| AACTAGAGAAGGAGATGAGA+TGG | 0.434343 | 8.1:+33261327 | None:intergenic |
| CCTTCTTGAAGGACCAACCT+TGG | 0.435759 | 8.1:-33261176 | MS.gene82942:CDS |
| GTGGTTGTTGGTTCTAGCTC+AGG | 0.436727 | 8.1:-33261289 | MS.gene82942:CDS |
| CTGGATGCAATGAAGGTGTT+TGG | 0.441209 | 8.1:+33259843 | None:intergenic |
| ATCGGAACACATAATAATAA+GGG | 0.446761 | 8.1:-33259593 | MS.gene82942:CDS |
| ACTCTTTGCATACATGGTTA+GGG | 0.446800 | 8.1:+33261038 | None:intergenic |
| TTTGCATTGGCTAGGGATCA+AGG | 0.450441 | 8.1:-33259737 | MS.gene82942:CDS |
| TGGTTATAAAGTGTTGGTAT+TGG | 0.455743 | 8.1:-33261233 | MS.gene82942:CDS |
| TGGAAGGCATTTGGATATAG+TGG | 0.456982 | 8.1:-33261574 | MS.gene82942:CDS |
| CTTGTGGACTTGGTGAAATC+AGG | 0.457492 | 8.1:-33260256 | MS.gene82942:CDS |
| GTGGAGGGTCTGCAATAAAC+TGG | 0.457726 | 8.1:-33261078 | MS.gene82942:CDS |
| TTTCATATGATAGCTTATAC+AGG | 0.458640 | 8.1:+33259691 | None:intergenic |
| TGGTTCACAACCGATTCCTT+CGG | 0.458693 | 8.1:+33259431 | None:intergenic |
| TGTGCTTTGAACTCTTGATC+AGG | 0.466681 | 8.1:+33261550 | None:intergenic |
| TTCATCCAGTGACAATGGCT+TGG | 0.466748 | 8.1:-33260000 | MS.gene82942:CDS |
| AAAGTGTTGGTATTGGAGAA+AGG | 0.473055 | 8.1:-33261226 | MS.gene82942:CDS |
| AGATATAGAAACATAGCAAA+AGG | 0.479005 | 8.1:-33260172 | MS.gene82942:CDS |
| TTGACTAGGCCTTTGTAAAG+AGG | 0.486817 | 8.1:+33261439 | None:intergenic |
| CAAACACCTTCATTGCATCC+AGG | 0.489019 | 8.1:-33259842 | MS.gene82942:CDS |
| GTAGAAGCTTTATTCGTTGG+AGG | 0.491315 | 8.1:+33261349 | None:intergenic |
| GGGTACTAATCCGAAGGAAT+CGG | 0.494393 | 8.1:-33259441 | MS.gene82942:CDS |
| TATCCCCAAGCCATTGTCAC+TGG | 0.495100 | 8.1:+33259995 | None:intergenic |
| AACAGCTCATGTATTTGCAT+TGG | 0.498744 | 8.1:-33259750 | MS.gene82942:CDS |
| CAATCTGAGTTTGAAGAGGA+AGG | 0.499308 | 8.1:-33260427 | MS.gene82942:CDS |
| TGATCTGGTGGAGCATTCCT+AGG | 0.500404 | 8.1:+33260343 | None:intergenic |
| GGGAAGGAGATTAAATGTAA+AGG | 0.500406 | 8.1:-33259573 | MS.gene82942:CDS |
| TCAGATGTGGAGCTGTCGTA+TGG | 0.503781 | 8.1:-33259462 | MS.gene82942:CDS |
| ATCCAAATGCCTTCCACGAT+GGG | 0.504500 | 8.1:+33261581 | None:intergenic |
| GGTGTCGATATGTCAGTTAA+CGG | 0.506509 | 8.1:+33259500 | None:intergenic |
| TTACATAGAACATACAAAGA+AGG | 0.506642 | 8.1:-33261511 | MS.gene82942:CDS |
| TTGGCTAGGGATCAAGGATC+AGG | 0.507895 | 8.1:-33259731 | MS.gene82942:CDS |
| GTTGGAGGAGTGACCGAGAC+AGG | 0.508311 | 8.1:+33261364 | None:intergenic |
| ACTTGTATCGCCTCGCAACT+AGG | 0.508642 | 8.1:+33260217 | None:intergenic |
| CACCAACCACAATAGTGATC+TGG | 0.511208 | 8.1:+33260328 | None:intergenic |
| ATCTGATGTGCTGAGCATAC+TGG | 0.514120 | 8.1:+33259479 | None:intergenic |
| TTCATCAATTGAGTTGTGGC+CGG | 0.523068 | 8.1:-33259957 | MS.gene82942:CDS |
| ATAATGCAATACTAAGAAAA+GGG | 0.523685 | 8.1:-33260399 | MS.gene82942:CDS |
| GCAGGTTCCACAGTTGGTGG+AGG | 0.524523 | 8.1:-33261094 | MS.gene82942:CDS |
| TTGGTGTTGCTTGGGATGCA+AGG | 0.525017 | 8.1:-33260311 | MS.gene82942:CDS |
| TCATGTATTTGCATTGGCTA+GGG | 0.529333 | 8.1:-33259744 | MS.gene82942:CDS |
| ATCGGTTGCAATCAAACCAT+TGG | 0.533167 | 8.1:+33261138 | None:intergenic |
| ATCATGTTAGTAACATTCCT+AGG | 0.534560 | 8.1:-33260360 | MS.gene82942:CDS |
| CCAAGGTTGGTCCTTCAAGA+AGG | 0.535524 | 8.1:+33261176 | None:intergenic |
| CGGAGTGCTTAGTGCTCCAC+AGG | 0.538565 | 8.1:+33260078 | None:intergenic |
| TGAATTATATAAGGAAGCAA+TGG | 0.538722 | 8.1:-33260476 | MS.gene82942:intron |
| GGCGAGGTACATTTGATCCA+AGG | 0.540144 | 8.1:+33261159 | None:intergenic |
| ATCAATTGAGTTGTGGCCGG+AGG | 0.540920 | 8.1:-33259954 | MS.gene82942:CDS |
| CACCAGATCACTATTGTGGT+TGG | 0.542919 | 8.1:-33260330 | MS.gene82942:CDS |
| GATGCTGTGTGTGAGAAAAT+GGG | 0.543385 | 8.1:-33260454 | MS.gene82942:CDS |
| CACCTTCATCAATTGAGTTG+TGG | 0.545552 | 8.1:-33259961 | MS.gene82942:CDS |
| CTCATGTATTTGCATTGGCT+AGG | 0.550837 | 8.1:-33259745 | MS.gene82942:CDS |
| AATCTGAGTTTGAAGAGGAA+GGG | 0.551448 | 8.1:-33260426 | MS.gene82942:CDS |
| GATCAAATGTACCTCGCCAA+TGG | 0.558212 | 8.1:-33261154 | MS.gene82942:CDS |
| CTCTTTGCATACATGGTTAG+GGG | 0.561003 | 8.1:+33261039 | None:intergenic |
| AATAAACCTGGATGCAATGA+AGG | 0.563738 | 8.1:+33259836 | None:intergenic |
| CAGGTTCCACAGTTGGTGGA+GGG | 0.563931 | 8.1:-33261093 | MS.gene82942:CDS |
| TGAATTTGAGAAATTTGTGA+AGG | 0.564056 | 8.1:-33259537 | MS.gene82942:CDS |
| GTACTAGCAGGTTCCACAGT+TGG | 0.564707 | 8.1:-33261100 | MS.gene82942:CDS |
| ATGTCTGTACTAGTACTAGC+AGG | 0.570617 | 8.1:-33261112 | MS.gene82942:CDS |
| GGCCACAACTCAATTGATGA+AGG | 0.571973 | 8.1:+33259959 | None:intergenic |
| ATTAGAACTGAGAATAAACC+TGG | 0.573777 | 8.1:+33259824 | None:intergenic |
| TGTTGCTTGGGATGCAAGGA+TGG | 0.573943 | 8.1:-33260307 | MS.gene82942:CDS |
| CAACAACCACTGCATCACAT+TGG | 0.574100 | 8.1:+33261302 | None:intergenic |
| GTTGGTTCTAGCTCAGGAGG+TGG | 0.574449 | 8.1:-33261283 | MS.gene82942:CDS |
| TGTGGGAAATACACTTGTAT+CGG | 0.576139 | 8.1:+33259370 | None:intergenic |
| TGGATTCACACCTAATGCTG+TGG | 0.577081 | 8.1:+33259352 | None:intergenic |
| GTTGTTGGTTCTAGCTCAGG+AGG | 0.577575 | 8.1:-33261286 | MS.gene82942:CDS |
| ATAGCCTGAACAGTGACCAT+TGG | 0.582109 | 8.1:+33259332 | None:intergenic |
| TATTCTCAGTTCTAATGCCG+TGG | 0.582977 | 8.1:-33259817 | MS.gene82942:CDS |
| CCGTCGTTACTCAAAAGAAG+TGG | 0.584024 | 8.1:-33260058 | MS.gene82942:CDS |
| TATCCAAATGCCTTCCACGA+TGG | 0.584082 | 8.1:+33261580 | None:intergenic |
| ACGATTTGGATTCCCTGTCT+CGG | 0.584903 | 8.1:-33261377 | MS.gene82942:CDS |
| GCATCTTCATCCAGTGACAA+TGG | 0.587150 | 8.1:-33260005 | MS.gene82942:CDS |
| TTCTAGCTCAGGAGGTGGCG+TGG | 0.588906 | 8.1:-33261278 | MS.gene82942:CDS |
| CAGATGTGGAGCTGTCGTAT+GGG | 0.592762 | 8.1:-33259461 | MS.gene82942:CDS |
| TCAATTGAGTTGTGGCCGGA+GGG | 0.595265 | 8.1:-33259953 | MS.gene82942:CDS |
| AATGCCGTGGAGTTCTGGAA+TGG | 0.595718 | 8.1:-33259804 | MS.gene82942:CDS |
| TACATCAGAAACATGGCTTG+TGG | 0.597161 | 8.1:-33260272 | MS.gene82942:CDS |
| TGCAGACCCTCCACCAACTG+TGG | 0.598403 | 8.1:+33261087 | None:intergenic |
| CAACCACAATAGTGATCTGG+TGG | 0.603094 | 8.1:+33260331 | None:intergenic |
| CAAGGTTGGTCCTTCAAGAA+GGG | 0.603377 | 8.1:+33261177 | None:intergenic |
| TATGCTCAGCACATCAGATG+TGG | 0.603706 | 8.1:-33259475 | MS.gene82942:CDS |
| GGGGAAACATGGGAAGTAGA+GGG | 0.613045 | 8.1:-33259404 | MS.gene82942:CDS |
| TCACATTGGATAACTAGAGA+AGG | 0.615554 | 8.1:+33261316 | None:intergenic |
| CTAGCAGGTTCCACAGTTGG+TGG | 0.615647 | 8.1:-33261097 | MS.gene82942:CDS |
| AAGGTCACAATTGTAGCCTG+TGG | 0.615915 | 8.1:-33260094 | MS.gene82942:CDS |
| GGATTCACACCTAATGCTGT+GGG | 0.618899 | 8.1:+33259353 | None:intergenic |
| ATATCCATTCCAGAACTCCA+CGG | 0.619262 | 8.1:+33259800 | None:intergenic |
| TGCAATTCTTCCTAGTTGCG+AGG | 0.619514 | 8.1:-33260227 | MS.gene82942:CDS |
| ATATGATAGCTTATACAGGT+AGG | 0.620131 | 8.1:+33259695 | None:intergenic |
| CAATTGATGAAGGTGCATCA+GGG | 0.621264 | 8.1:+33259969 | None:intergenic |
| AGGTACATTTGATCCAAGGT+TGG | 0.622264 | 8.1:+33261163 | None:intergenic |
| GACTTGGTGAAATCAGGTAA+TGG | 0.624349 | 8.1:-33260250 | MS.gene82942:CDS |
| GGAATCGGTTGTGAACCAAA+CGG | 0.627505 | 8.1:-33259426 | MS.gene82942:CDS |
| TCGTATGGGTACTAATCCGA+AGG | 0.628349 | 8.1:-33259447 | MS.gene82942:CDS |
| GCTCCACCAGATCACTATTG+TGG | 0.629994 | 8.1:-33260334 | MS.gene82942:CDS |
| AATCGGTTGTGAACCAAACG+GGG | 0.631519 | 8.1:-33259424 | MS.gene82942:CDS |
| GAACACATAATAATAAGGGA+AGG | 0.632097 | 8.1:-33259589 | MS.gene82942:CDS |
| TTGGAGGAGTGACCGAGACA+GGG | 0.637379 | 8.1:+33261365 | None:intergenic |
| AGCATTAGGTGTGAATCCAA+TGG | 0.640847 | 8.1:-33259348 | MS.gene82942:CDS |
| AGTCCAATCTGAGTTTGAAG+AGG | 0.641653 | 8.1:-33260431 | MS.gene82942:CDS |
| TACTAGTACAGACATATCAT+CGG | 0.642757 | 8.1:+33261120 | None:intergenic |
| GAAAAGGGTGTCAAGAAATG+GGG | 0.649723 | 8.1:-33260384 | MS.gene82942:CDS |
| TTTACACAAAGGAATCGAGA+AGG | 0.653548 | 8.1:-33259651 | MS.gene82942:CDS |
| TAGAAACATAGCAAAAGGAG+TGG | 0.655693 | 8.1:-33260167 | MS.gene82942:CDS |
| GCGGATAGTTCAGATTGACT+AGG | 0.656808 | 8.1:+33261425 | None:intergenic |
| CATCCAGTGACAATGGCTTG+GGG | 0.658174 | 8.1:-33259998 | MS.gene82942:CDS |
| AGTTATCCAATGTGATGCAG+TGG | 0.659208 | 8.1:-33261308 | MS.gene82942:CDS |
| GTCTTGTATAGAGAAAAGAA+AGG | 0.661456 | 8.1:-33260196 | MS.gene82942:CDS |
| GAATCTGAAATGATATCATG+CGG | 0.669463 | 8.1:+33261406 | None:intergenic |
| GGATCAAGGATCAGGAACTG+TGG | 0.671162 | 8.1:-33259723 | MS.gene82942:CDS |
| TTGCAATCAAACCATTGGCG+AGG | 0.674160 | 8.1:+33261143 | None:intergenic |
| AGAAAAGTACATCAGAAACA+TGG | 0.675819 | 8.1:-33260279 | MS.gene82942:CDS |
| GACAGAGAGAATTTACACAA+AGG | 0.699013 | 8.1:-33259662 | MS.gene82942:CDS |
| ATCGGTTGTGAACCAAACGG+GGG | 0.736378 | 8.1:-33259423 | MS.gene82942:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAATTTAATTATTCGA+CGG | + | chr8.1:33259948-33259967 | None:intergenic | 10.0% |
| !! | TAAAAGAAATTAAAAACAAT+TGG | - | chr8.1:33260321-33260340 | MS.gene82942:CDS | 10.0% |
| !!! | TTGAAATTGATTTTAGTTTT+AGG | + | chr8.1:33259996-33260015 | None:intergenic | 15.0% |
| !! | AATAATGCAATACTAAGAAA+AGG | - | chr8.1:33260505-33260524 | MS.gene82942:intron | 20.0% |
| !! | ATAATGCAATACTAAGAAAA+GGG | - | chr8.1:33260506-33260525 | MS.gene82942:intron | 20.0% |
| !! | ATTGAATACAATGGTAAAAA+AGG | - | chr8.1:33260769-33260788 | MS.gene82942:intron | 20.0% |
| !! | GTTTGAAAAATGAAAACATA+GGG | - | chr8.1:33260869-33260888 | MS.gene82942:intron | 20.0% |
| !! | GTTTGAAAGTGAATTATATA+AGG | - | chr8.1:33260420-33260439 | MS.gene82942:CDS | 20.0% |
| !!! | AATTGATTTTAGTTTTAGGT+TGG | + | chr8.1:33259992-33260011 | None:intergenic | 20.0% |
| ! | AAAAAGTGGTTATAAAGTGT+TGG | - | chr8.1:33259666-33259685 | MS.gene82942:CDS | 25.0% |
| ! | AATCGGAACACATAATAATA+AGG | - | chr8.1:33261311-33261330 | MS.gene82942:CDS | 25.0% |
| ! | AGATATAGAAACATAGCAAA+AGG | - | chr8.1:33260733-33260752 | MS.gene82942:intron | 25.0% |
| ! | ATAAAAAAAGCTATGAAGGA+GGG | - | chr8.1:33260977-33260996 | MS.gene82942:intron | 25.0% |
| ! | ATCGGAACACATAATAATAA+GGG | - | chr8.1:33261312-33261331 | MS.gene82942:CDS | 25.0% |
| ! | ATGTTCTTGAAGTTCTTAAA+AGG | - | chr8.1:33261616-33261635 | MS.gene82942:CDS | 25.0% |
| ! | GGTTTGAAAAATGAAAACAT+AGG | - | chr8.1:33260868-33260887 | MS.gene82942:intron | 25.0% |
| ! | TGAATTATATAAGGAAGCAA+TGG | - | chr8.1:33260429-33260448 | MS.gene82942:CDS | 25.0% |
| ! | TGAATTTGAGAAATTTGTGA+AGG | - | chr8.1:33261368-33261387 | MS.gene82942:CDS | 25.0% |
| ! | TTACATAGAACATACAAAGA+AGG | - | chr8.1:33259394-33259413 | MS.gene82942:CDS | 25.0% |
| ! | TTTCATATGATAGCTTATAC+AGG | + | chr8.1:33261217-33261236 | None:intergenic | 25.0% |
| !!! | GCTTTTGAAATTGAATACAA+TGG | - | chr8.1:33260760-33260779 | MS.gene82942:intron | 25.0% |
| AAATCAGAAAAGGAAAGTGA+TGG | - | chr8.1:33260284-33260303 | MS.gene82942:CDS | 30.0% | |
| AATCAGAAAAGGAAAGTGAT+GGG | - | chr8.1:33260285-33260304 | MS.gene82942:CDS | 30.0% | |
| ATATGATAGCTTATACAGGT+AGG | + | chr8.1:33261213-33261232 | None:intergenic | 30.0% | |
| ATCATGTTAGTAACATTCCT+AGG | - | chr8.1:33260545-33260564 | MS.gene82942:intron | 30.0% | |
| ATTAGAACTGAGAATAAACC+TGG | + | chr8.1:33261084-33261103 | None:intergenic | 30.0% | |
| CATAAAAAAAGCTATGAAGG+AGG | - | chr8.1:33260976-33260995 | MS.gene82942:intron | 30.0% | |
| GAACACATAATAATAAGGGA+AGG | - | chr8.1:33261316-33261335 | MS.gene82942:CDS | 30.0% | |
| GGACATAAAAAAAGCTATGA+AGG | - | chr8.1:33260973-33260992 | MS.gene82942:intron | 30.0% | |
| GGTTAGAAAAGAAGAAAGAA+AGG | - | chr8.1:33260244-33260263 | MS.gene82942:CDS | 30.0% | |
| GTCTTGTATAGAGAAAAGAA+AGG | - | chr8.1:33260709-33260728 | MS.gene82942:intron | 30.0% | |
| TACTAGTACAGACATATCAT+CGG | + | chr8.1:33259788-33259807 | None:intergenic | 30.0% | |
| ! | AGAAAAGTACATCAGAAACA+TGG | - | chr8.1:33260626-33260645 | MS.gene82942:intron | 30.0% |
| ! | GAATCTGAAATGATATCATG+CGG | + | chr8.1:33259502-33259521 | None:intergenic | 30.0% |
| ! | TTCCTTTTCTGATTTCTATC+AGG | + | chr8.1:33260279-33260298 | None:intergenic | 30.0% |
| !! | CATGTTGATGAAAAGGTTTT+AGG | - | chr8.1:33259442-33259461 | MS.gene82942:CDS | 30.0% |
| !! | TGGTTATAAAGTGTTGGTAT+TGG | - | chr8.1:33259672-33259691 | MS.gene82942:CDS | 30.0% |
| AACAATCTTTCCCTTCTTGA+AGG | - | chr8.1:33259718-33259737 | MS.gene82942:CDS | 35.0% | |
| AACAGCTCATGTATTTGCAT+TGG | - | chr8.1:33261155-33261174 | MS.gene82942:CDS | 35.0% | |
| AAGAAAAAAACAACCCATCG+TGG | - | chr8.1:33259311-33259330 | MS.gene82942:CDS | 35.0% | |
| AAGAAGAAAGAAAGGAAACG+TGG | - | chr8.1:33260252-33260271 | MS.gene82942:CDS | 35.0% | |
| AATAAACCTGGATGCAATGA+AGG | + | chr8.1:33261072-33261091 | None:intergenic | 35.0% | |
| AATCTGAGTTTGAAGAGGAA+GGG | - | chr8.1:33260479-33260498 | MS.gene82942:intron | 35.0% | |
| ACCTGAAAATGAAAGAGTTC+TGG | + | chr8.1:33259286-33259305 | None:intergenic | 35.0% | |
| ACTCTTTGCATACATGGTTA+GGG | + | chr8.1:33259870-33259889 | None:intergenic | 35.0% | |
| AGAAGAAAGAAAGGAAACGT+GGG | - | chr8.1:33260253-33260272 | MS.gene82942:CDS | 35.0% | |
| GACAGAGAGAATTTACACAA+AGG | - | chr8.1:33261243-33261262 | MS.gene82942:CDS | 35.0% | |
| GACTTTGACAAAACTGGATA+TGG | - | chr8.1:33261030-33261049 | MS.gene82942:intron | 35.0% | |
| GGGAAGGAGATTAAATGTAA+AGG | - | chr8.1:33261332-33261351 | MS.gene82942:CDS | 35.0% | |
| TAGAAACATAGCAAAAGGAG+TGG | - | chr8.1:33260738-33260757 | MS.gene82942:intron | 35.0% | |
| TCACATTGGATAACTAGAGA+AGG | + | chr8.1:33259592-33259611 | None:intergenic | 35.0% | |
| TGAGAAATCAGAAGGAAAAC+AGG | - | chr8.1:33260215-33260234 | MS.gene82942:CDS | 35.0% | |
| TGTGGGAAATACACTTGTAT+CGG | + | chr8.1:33261538-33261557 | None:intergenic | 35.0% | |
| TGTTGATGTGAGAAATCAGA+AGG | - | chr8.1:33260207-33260226 | MS.gene82942:CDS | 35.0% | |
| TTCAAAACTGACCTGAAAAG+AGG | - | chr8.1:33260109-33260128 | MS.gene82942:CDS | 35.0% | |
| TTTACACAAAGGAATCGAGA+AGG | - | chr8.1:33261254-33261273 | MS.gene82942:CDS | 35.0% | |
| !! | AAAGTGTTGGTATTGGAGAA+AGG | - | chr8.1:33259679-33259698 | MS.gene82942:CDS | 35.0% |
| !! | AAGAAAAGGGTGTCAAGAAA+TGG | - | chr8.1:33260519-33260538 | MS.gene82942:intron | 35.0% |
| !! | AGAAAAGGGTGTCAAGAAAT+GGG | - | chr8.1:33260520-33260539 | MS.gene82942:intron | 35.0% |
| !! | AGAAAGGAAGCTATTTTGCT+AGG | - | chr8.1:33259695-33259714 | MS.gene82942:CDS | 35.0% |
| !! | ATGGTAGAAGCTTTATTCGT+TGG | + | chr8.1:33259562-33259581 | None:intergenic | 35.0% |
| !! | TCAGATTCTCTAAGACGATT+TGG | - | chr8.1:33259514-33259533 | MS.gene82942:CDS | 35.0% |
| !! | TCATGTATTTGCATTGGCTA+GGG | - | chr8.1:33261161-33261180 | MS.gene82942:CDS | 35.0% |
| !! | TTTCAAACAGTTCTAGCTCA+TGG | + | chr8.1:33260408-33260427 | None:intergenic | 35.0% |
| !!! | GTTTTAGGACCTCTTTACAA+AGG | - | chr8.1:33259457-33259476 | MS.gene82942:CDS | 35.0% |
| !!! | TAGCTTTTTTTATGTCCCTC+CGG | + | chr8.1:33260970-33260989 | None:intergenic | 35.0% |
| AAAAAACAACCCATCGTGGA+AGG | - | chr8.1:33259315-33259334 | MS.gene82942:CDS | 40.0% | |
| AAAAACAATTGGACCTGAGC+TGG | - | chr8.1:33260332-33260351 | MS.gene82942:CDS | 40.0% | |
| AAAGAGGAGAGGAGATGAAA+TGG | - | chr8.1:33260125-33260144 | MS.gene82942:CDS | 40.0% | |
| AACTAGAGAAGGAGATGAGA+TGG | + | chr8.1:33259581-33259600 | None:intergenic | 40.0% | |
| AAGAGGAGAGGAGATGAAAT+GGG | - | chr8.1:33260126-33260145 | MS.gene82942:CDS | 40.0% | |
| AGCATTAGGTGTGAATCCAA+TGG | - | chr8.1:33261557-33261576 | MS.gene82942:CDS | 40.0% | |
| AGGTACATTTGATCCAAGGT+TGG | + | chr8.1:33259745-33259764 | None:intergenic | 40.0% | |
| AGTCCAATCTGAGTTTGAAG+AGG | - | chr8.1:33260474-33260493 | MS.gene82942:intron | 40.0% | |
| AGTGTATTTCCCACAGCATT+AGG | - | chr8.1:33261543-33261562 | MS.gene82942:CDS | 40.0% | |
| AGTTATCCAATGTGATGCAG+TGG | - | chr8.1:33259597-33259616 | MS.gene82942:CDS | 40.0% | |
| ATATCCATTCCAGAACTCCA+CGG | + | chr8.1:33261108-33261127 | None:intergenic | 40.0% | |
| ATCGGTTGCAATCAAACCAT+TGG | + | chr8.1:33259770-33259789 | None:intergenic | 40.0% | |
| ATGTCTGTACTAGTACTAGC+AGG | - | chr8.1:33259793-33259812 | MS.gene82942:CDS | 40.0% | |
| CAATCTGAGTTTGAAGAGGA+AGG | - | chr8.1:33260478-33260497 | MS.gene82942:intron | 40.0% | |
| CACTCTTTGCATACATGGTT+AGG | + | chr8.1:33259871-33259890 | None:intergenic | 40.0% | |
| CTAACCATGTATGCAAAGAG+TGG | - | chr8.1:33259869-33259888 | MS.gene82942:CDS | 40.0% | |
| CTCTTTGCATACATGGTTAG+GGG | + | chr8.1:33259869-33259888 | None:intergenic | 40.0% | |
| CTTCCTCTTCAAACTCAGAT+TGG | + | chr8.1:33260480-33260499 | None:intergenic | 40.0% | |
| GAAATCAGAAGGAAAACAGG+TGG | - | chr8.1:33260218-33260237 | MS.gene82942:CDS | 40.0% | |
| GATGCTGTGTGTGAGAAAAT+GGG | - | chr8.1:33260451-33260470 | MS.gene82942:CDS | 40.0% | |
| GGACGACAAGAAAAAGAAGA+CGG | - | chr8.1:33259415-33259434 | MS.gene82942:CDS | 40.0% | |
| GGCCTGATAGAAATCAGAAA+AGG | - | chr8.1:33260274-33260293 | MS.gene82942:CDS | 40.0% | |
| TACATCAGAAACATGGCTTG+TGG | - | chr8.1:33260633-33260652 | MS.gene82942:intron | 40.0% | |
| TTGACTAGGCCTTTGTAAAG+AGG | + | chr8.1:33259469-33259488 | None:intergenic | 40.0% | |
| ! | AGAAAAGGAAAGTGATGGGA+TGG | - | chr8.1:33260289-33260308 | MS.gene82942:CDS | 40.0% |
| ! | CAATTGATGAAGGTGCATCA+GGG | + | chr8.1:33260939-33260958 | None:intergenic | 40.0% |
| ! | CACCTTCATCAATTGAGTTG+TGG | - | chr8.1:33260944-33260963 | MS.gene82942:intron | 40.0% |
| ! | CGGTGATCATGTTGATGAAA+AGG | - | chr8.1:33259435-33259454 | MS.gene82942:CDS | 40.0% |
| ! | GAAAAGGAAAGTGATGGGAT+GGG | - | chr8.1:33260290-33260309 | MS.gene82942:CDS | 40.0% |
| ! | GCCAGAACTCTTTCATTTTC+AGG | - | chr8.1:33259282-33259301 | MS.gene82942:CDS | 40.0% |
| ! | TATTCTCAGTTCTAATGCCG+TGG | - | chr8.1:33261088-33261107 | MS.gene82942:CDS | 40.0% |
| ! | TCAATTGATGAAGGTGCATC+AGG | + | chr8.1:33260940-33260959 | None:intergenic | 40.0% |
| ! | TGTGCTTTGAACTCTTGATC+AGG | + | chr8.1:33259358-33259377 | None:intergenic | 40.0% |
| ! | TTCATCAATTGAGTTGTGGC+CGG | - | chr8.1:33260948-33260967 | MS.gene82942:intron | 40.0% |
| !! | CCACTTCTTTTGAGTAACGA+CGG | + | chr8.1:33260850-33260869 | None:intergenic | 40.0% |
| !! | CTCATGTATTTGCATTGGCT+AGG | - | chr8.1:33261160-33261179 | MS.gene82942:CDS | 40.0% |
| !! | GAAAAGGGTGTCAAGAAATG+GGG | - | chr8.1:33260521-33260540 | MS.gene82942:intron | 40.0% |
| !! | GACTTGGTGAAATCAGGTAA+TGG | - | chr8.1:33260655-33260674 | MS.gene82942:intron | 40.0% |
| !! | GGTGTCGATATGTCAGTTAA+CGG | + | chr8.1:33261408-33261427 | None:intergenic | 40.0% |
| !! | GTAGAAGCTTTATTCGTTGG+AGG | + | chr8.1:33259559-33259578 | None:intergenic | 40.0% |
| !! | TATTGTGGTTGGTGTTGCTT+GGG | - | chr8.1:33260586-33260605 | MS.gene82942:intron | 40.0% |
| !! | TGGAAGGCATTTGGATATAG+TGG | - | chr8.1:33259331-33259350 | MS.gene82942:CDS | 40.0% |
| !! | TGGTAAAAAAGGCATTTGCG+TGG | - | chr8.1:33260780-33260799 | MS.gene82942:intron | 40.0% |
| AACTGACCTGAAAAGAGGAG+AGG | - | chr8.1:33260114-33260133 | MS.gene82942:CDS | 45.0% | |
| AAGGTCACAATTGTAGCCTG+TGG | - | chr8.1:33260811-33260830 | MS.gene82942:intron | 45.0% | |
| AATCGGTTGTGAACCAAACG+GGG | - | chr8.1:33261481-33261500 | MS.gene82942:CDS | 45.0% | |
| AGAGAGAGAGTAACGGTTCA+TGG | - | chr8.1:33260173-33260192 | MS.gene82942:CDS | 45.0% | |
| AGAGAGTAACGGTTCATGGT+TGG | - | chr8.1:33260177-33260196 | MS.gene82942:CDS | 45.0% | |
| AGGAGAGAGAGAGAGAGTAA+CGG | - | chr8.1:33260166-33260185 | MS.gene82942:CDS | 45.0% | |
| AGTAACGGTTCATGGTTGGT+TGG | - | chr8.1:33260181-33260200 | MS.gene82942:CDS | 45.0% | |
| ATAGCCTGAACAGTGACCAT+TGG | + | chr8.1:33261576-33261595 | None:intergenic | 45.0% | |
| ATCCAAATGCCTTCCACGAT+GGG | + | chr8.1:33259327-33259346 | None:intergenic | 45.0% | |
| ATCTGATGTGCTGAGCATAC+TGG | + | chr8.1:33261429-33261448 | None:intergenic | 45.0% | |
| CAAACACCTTCATTGCATCC+AGG | - | chr8.1:33261063-33261082 | MS.gene82942:CDS | 45.0% | |
| CAACAACCACTGCATCACAT+TGG | + | chr8.1:33259606-33259625 | None:intergenic | 45.0% | |
| CAACCACAATAGTGATCTGG+TGG | + | chr8.1:33260577-33260596 | None:intergenic | 45.0% | |
| CAATGTGATGCAGTGGTTGT+TGG | - | chr8.1:33259604-33259623 | MS.gene82942:CDS | 45.0% | |
| CACAGTGATATTGCAAGTCC+AGG | + | chr8.1:33259913-33259932 | None:intergenic | 45.0% | |
| CACCAACCACAATAGTGATC+TGG | + | chr8.1:33260580-33260599 | None:intergenic | 45.0% | |
| CACCAGATCACTATTGTGGT+TGG | - | chr8.1:33260575-33260594 | MS.gene82942:intron | 45.0% | |
| CCGTCGTTACTCAAAAGAAG+TGG | - | chr8.1:33260847-33260866 | MS.gene82942:intron | 45.0% | |
| CTGGACTTGCAATATCACTG+TGG | - | chr8.1:33259911-33259930 | MS.gene82942:CDS | 45.0% | |
| GAATCCAATGGTCACTGTTC+AGG | - | chr8.1:33261569-33261588 | MS.gene82942:CDS | 45.0% | |
| GAATCGGTTGTGAACCAAAC+GGG | - | chr8.1:33261480-33261499 | MS.gene82942:CDS | 45.0% | |
| GATCAAATGTACCTCGCCAA+TGG | - | chr8.1:33259751-33259770 | MS.gene82942:CDS | 45.0% | |
| GCAGCTGAAGCTGAAGAAAT+CGG | - | chr8.1:33261294-33261313 | MS.gene82942:CDS | 45.0% | |
| GCATCTTCATCCAGTGACAA+TGG | - | chr8.1:33260900-33260919 | MS.gene82942:intron | 45.0% | |
| GCGGATAGTTCAGATTGACT+AGG | + | chr8.1:33259483-33259502 | None:intergenic | 45.0% | |
| GGAAGTAGAGGGTCTTTATC+TGG | - | chr8.1:33261512-33261531 | MS.gene82942:CDS | 45.0% | |
| GGAATCGGTTGTGAACCAAA+CGG | - | chr8.1:33261479-33261498 | MS.gene82942:CDS | 45.0% | |
| GGATGCTGTGTGTGAGAAAA+TGG | - | chr8.1:33260450-33260469 | MS.gene82942:CDS | 45.0% | |
| GGATTCACACCTAATGCTGT+GGG | + | chr8.1:33261555-33261574 | None:intergenic | 45.0% | |
| GGCCACAACTCAATTGATGA+AGG | + | chr8.1:33260949-33260968 | None:intergenic | 45.0% | |
| GGGTACTAATCCGAAGGAAT+CGG | - | chr8.1:33261464-33261483 | MS.gene82942:CDS | 45.0% | |
| GTCGCAGACTTTGACAAAAC+TGG | - | chr8.1:33261024-33261043 | MS.gene82942:intron | 45.0% | |
| TATCCAAATGCCTTCCACGA+TGG | + | chr8.1:33259328-33259347 | None:intergenic | 45.0% | |
| TATGCTCAGCACATCAGATG+TGG | - | chr8.1:33261430-33261449 | MS.gene82942:CDS | 45.0% | |
| TCATCCAGTGACAATGGCTT+GGG | - | chr8.1:33260906-33260925 | MS.gene82942:intron | 45.0% | |
| TCGTATGGGTACTAATCCGA+AGG | - | chr8.1:33261458-33261477 | MS.gene82942:CDS | 45.0% | |
| TGCAATTCTTCCTAGTTGCG+AGG | - | chr8.1:33260678-33260697 | MS.gene82942:intron | 45.0% | |
| TGGATTCACACCTAATGCTG+TGG | + | chr8.1:33261556-33261575 | None:intergenic | 45.0% | |
| TTCATCCAGTGACAATGGCT+TGG | - | chr8.1:33260905-33260924 | MS.gene82942:intron | 45.0% | |
| TTGCAATCAAACCATTGGCG+AGG | + | chr8.1:33259765-33259784 | None:intergenic | 45.0% | |
| ! | ACGATTTGGATTCCCTGTCT+CGG | - | chr8.1:33259528-33259547 | MS.gene82942:CDS | 45.0% |
| ! | AGAAACATGGCTTGTGGACT+TGG | - | chr8.1:33260639-33260658 | MS.gene82942:intron | 45.0% |
| ! | CAAGGTTGGTCCTTCAAGAA+GGG | + | chr8.1:33259731-33259750 | None:intergenic | 45.0% |
| ! | TCATCTCCTCTCCTCTTTTC+AGG | + | chr8.1:33260123-33260142 | None:intergenic | 45.0% |
| ! | TGGTTCACAACCGATTCCTT+CGG | + | chr8.1:33261477-33261496 | None:intergenic | 45.0% |
| !! | ATGGTTAGGGGTTTTGATGC+TGG | + | chr8.1:33259857-33259876 | None:intergenic | 45.0% |
| !! | CTATTGTGGTTGGTGTTGCT+TGG | - | chr8.1:33260585-33260604 | MS.gene82942:intron | 45.0% |
| !! | CTGGATGCAATGAAGGTGTT+TGG | + | chr8.1:33261065-33261084 | None:intergenic | 45.0% |
| !! | CTTGTGGACTTGGTGAAATC+AGG | - | chr8.1:33260649-33260668 | MS.gene82942:intron | 45.0% |
| !! | TTTGCATTGGCTAGGGATCA+AGG | - | chr8.1:33261168-33261187 | MS.gene82942:CDS | 45.0% |
| ACTTGTATCGCCTCGCAACT+AGG | + | chr8.1:33260691-33260710 | None:intergenic | 50.0% | |
| ATCGGTTGTGAACCAAACGG+GGG | - | chr8.1:33261482-33261501 | MS.gene82942:CDS | 50.0% | |
| CAGAAGGAAAACAGGTGGTG+CGG | - | chr8.1:33260223-33260242 | MS.gene82942:CDS | 50.0% | |
| CAGATGTGGAGCTGTCGTAT+GGG | - | chr8.1:33261444-33261463 | MS.gene82942:CDS | 50.0% | |
| CATCCAGTGACAATGGCTTG+GGG | - | chr8.1:33260907-33260926 | MS.gene82942:intron | 50.0% | |
| CATTTGCGTGGTCGAGTCTA+AGG | - | chr8.1:33260792-33260811 | MS.gene82942:intron | 50.0% | |
| CCTTCTTGAAGGACCAACCT+TGG | - | chr8.1:33259729-33259748 | MS.gene82942:CDS | 50.0% | |
| CGCACCACTCTTTGCATACA+TGG | + | chr8.1:33259876-33259895 | None:intergenic | 50.0% | |
| GAACCAAACGGGGGAAACAT+GGG | - | chr8.1:33261491-33261510 | MS.gene82942:CDS | 50.0% | |
| GCTCCACCAGATCACTATTG+TGG | - | chr8.1:33260571-33260590 | MS.gene82942:intron | 50.0% | |
| GGATCAAGGATCAGGAACTG+TGG | - | chr8.1:33261182-33261201 | MS.gene82942:CDS | 50.0% | |
| GGCGAGGTACATTTGATCCA+AGG | + | chr8.1:33259749-33259768 | None:intergenic | 50.0% | |
| GGGGAAACATGGGAAGTAGA+GGG | - | chr8.1:33261501-33261520 | MS.gene82942:CDS | 50.0% | |
| GTACTAGCAGGTTCCACAGT+TGG | - | chr8.1:33259805-33259824 | MS.gene82942:CDS | 50.0% | |
| GTGGAGGGTCTGCAATAAAC+TGG | - | chr8.1:33259827-33259846 | MS.gene82942:CDS | 50.0% | |
| GTTCTAATGCCGTGGAGTTC+TGG | - | chr8.1:33261096-33261115 | MS.gene82942:CDS | 50.0% | |
| TATCCCCAAGCCATTGTCAC+TGG | + | chr8.1:33260913-33260932 | None:intergenic | 50.0% | |
| TCAGATGTGGAGCTGTCGTA+TGG | - | chr8.1:33261443-33261462 | MS.gene82942:CDS | 50.0% | |
| TGAACCAAACGGGGGAAACA+TGG | - | chr8.1:33261490-33261509 | MS.gene82942:CDS | 50.0% | |
| TTGGCTAGGGATCAAGGATC+AGG | - | chr8.1:33261174-33261193 | MS.gene82942:CDS | 50.0% | |
| ! | AACGGTTCATGGTTGGTTGG+TGG | - | chr8.1:33260184-33260203 | MS.gene82942:CDS | 50.0% |
| ! | ATCAATTGAGTTGTGGCCGG+AGG | - | chr8.1:33260951-33260970 | MS.gene82942:intron | 50.0% |
| ! | CCAAGGTTGGTCCTTCAAGA+AGG | + | chr8.1:33259732-33259751 | None:intergenic | 50.0% |
| ! | GCGGGAGTTCTAGCAAAAAG+TGG | - | chr8.1:33259652-33259671 | MS.gene82942:CDS | 50.0% |
| ! | TCAATTGAGTTGTGGCCGGA+GGG | - | chr8.1:33260952-33260971 | MS.gene82942:intron | 50.0% |
| ! | TGATCTGGTGGAGCATTCCT+AGG | + | chr8.1:33260565-33260584 | None:intergenic | 50.0% |
| ! | TGTTGCTTGGGATGCAAGGA+TGG | - | chr8.1:33260598-33260617 | MS.gene82942:intron | 50.0% |
| !! | AACCCATCGTGGAAGGCATT+TGG | - | chr8.1:33259322-33259341 | MS.gene82942:CDS | 50.0% |
| !! | AATGCCGTGGAGTTCTGGAA+TGG | - | chr8.1:33261101-33261120 | MS.gene82942:CDS | 50.0% |
| !! | CGAGAAGGTGCTGAGAATTC+TGG | - | chr8.1:33261269-33261288 | MS.gene82942:CDS | 50.0% |
| !! | GAGATGAAATGGGCTGAGAG+AGG | - | chr8.1:33260136-33260155 | MS.gene82942:CDS | 50.0% |
| !! | GTGGTTGTTGGTTCTAGCTC+AGG | - | chr8.1:33259616-33259635 | MS.gene82942:CDS | 50.0% |
| !! | GTTGTTGGTTCTAGCTCAGG+AGG | - | chr8.1:33259619-33259638 | MS.gene82942:CDS | 50.0% |
| !! | TTGGTGTTGCTTGGGATGCA+AGG | - | chr8.1:33260594-33260613 | MS.gene82942:intron | 50.0% |
| AAAGAGTGGTGCGATCGCAG+GGG | - | chr8.1:33259883-33259902 | MS.gene82942:CDS | 55.0% | |
| CAAAGAGTGGTGCGATCGCA+GGG | - | chr8.1:33259882-33259901 | MS.gene82942:CDS | 55.0% | |
| CAATTGGACCTGAGCTGGTG+TGG | - | chr8.1:33260337-33260356 | MS.gene82942:CDS | 55.0% | |
| CTAGCAGGTTCCACAGTTGG+TGG | - | chr8.1:33259808-33259827 | MS.gene82942:CDS | 55.0% | |
| CTTCCCATGTTTCCCCCGTT+TGG | + | chr8.1:33261497-33261516 | None:intergenic | 55.0% | |
| GGGGGAAACATGGGAAGTAG+AGG | - | chr8.1:33261500-33261519 | MS.gene82942:CDS | 55.0% | |
| TAGCTCATGGCGATCGCACA+GGG | + | chr8.1:33260395-33260414 | None:intergenic | 55.0% | |
| TTGGAGGAGTGACCGAGACA+GGG | + | chr8.1:33259543-33259562 | None:intergenic | 55.0% | |
| ! | GGAAAGTGATGGGATGGGCT+AGG | - | chr8.1:33260295-33260314 | MS.gene82942:CDS | 55.0% |
| !! | CAGGTTCCACAGTTGGTGGA+GGG | - | chr8.1:33259812-33259831 | MS.gene82942:CDS | 55.0% |
| !! | GTTGGTTCTAGCTCAGGAGG+TGG | - | chr8.1:33259622-33259641 | MS.gene82942:CDS | 55.0% |
| AGCTCATGGCGATCGCACAG+GGG | + | chr8.1:33260394-33260413 | None:intergenic | 60.0% | |
| CTAGCTCATGGCGATCGCAC+AGG | + | chr8.1:33260396-33260415 | None:intergenic | 60.0% | |
| GCAAAGAGTGGTGCGATCGC+AGG | - | chr8.1:33259881-33259900 | MS.gene82942:CDS | 60.0% | |
| GGCAATAGCCACACCAGCTC+AGG | + | chr8.1:33260348-33260367 | None:intergenic | 60.0% | |
| GGGCTGAGAGAGGAGAGAGA+AGG | - | chr8.1:33260146-33260165 | MS.gene82942:CDS | 60.0% | |
| GTTGGAGGAGTGACCGAGAC+AGG | + | chr8.1:33259544-33259563 | None:intergenic | 60.0% | |
| TGCAGACCCTCCACCAACTG+TGG | + | chr8.1:33259821-33259840 | None:intergenic | 60.0% | |
| ! | CGGAGTGCTTAGTGCTCCAC+AGG | + | chr8.1:33260830-33260849 | None:intergenic | 60.0% |
| !! | GCAGGTTCCACAGTTGGTGG+AGG | - | chr8.1:33259811-33259830 | MS.gene82942:CDS | 60.0% |
| !! | TTCTAGCTCAGGAGGTGGCG+TGG | - | chr8.1:33259627-33259646 | MS.gene82942:CDS | 60.0% |
| CTCAGGAGGTGGCGTGGTTG+CGG | - | chr8.1:33259633-33259652 | MS.gene82942:CDS | 65.0% | |
| GACCTGAGCAAGGCAGGGTG+TGG | + | chr8.1:33260369-33260388 | None:intergenic | 65.0% | |
| TCAGGAGGTGGCGTGGTTGC+GGG | - | chr8.1:33259634-33259653 | MS.gene82942:CDS | 65.0% | |
| TCATGGCGATCGCACAGGGG+CGG | + | chr8.1:33260391-33260410 | None:intergenic | 65.0% | |
| TGCCACACCCTGCCTTGCTC+AGG | - | chr8.1:33260364-33260383 | MS.gene82942:CDS | 65.0% | |
| CACAGGGGCGGACCTGAGCA+AGG | + | chr8.1:33260379-33260398 | None:intergenic | 70.0% | |
| GAGTGGTGCGATCGCAGGGG+CGG | - | chr8.1:33259886-33259905 | MS.gene82942:CDS | 70.0% | |
| GGGCGGACCTGAGCAAGGCA+GGG | + | chr8.1:33260374-33260393 | None:intergenic | 70.0% | |
| GGGGCGGACCTGAGCAAGGC+AGG | + | chr8.1:33260375-33260394 | None:intergenic | 75.0% | |
| TGCGATCGCAGGGGCGGACC+TGG | - | chr8.1:33259892-33259911 | MS.gene82942:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 33259280 | 33261647 | 33259280 | ID=MS.gene82942 |
| chr8.1 | mRNA | 33259280 | 33261647 | 33259280 | ID=MS.gene82942.t1;Parent=MS.gene82942 |
| chr8.1 | exon | 33261051 | 33261647 | 33261051 | ID=MS.gene82942.t1.exon1;Parent=MS.gene82942.t1 |
| chr8.1 | CDS | 33261051 | 33261647 | 33261051 | ID=cds.MS.gene82942.t1;Parent=MS.gene82942.t1 |
| chr8.1 | exon | 33259280 | 33260485 | 33259280 | ID=MS.gene82942.t1.exon2;Parent=MS.gene82942.t1 |
| chr8.1 | CDS | 33259280 | 33260485 | 33259280 | ID=cds.MS.gene82942.t1;Parent=MS.gene82942.t1 |
| Gene Sequence |
| Protein sequence |
