Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006744.t1 | XP_003607656.2 | 92.3 | 754 | 34 | 4 | 1 | 730 | 1 | 754 | 0.00E+00 | 1382.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006744.t1 | B5WWZ8 | 77.4 | 748 | 141 | 6 | 1 | 724 | 1 | 744 | 0.0e+00 | 1164.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006744.t1 | G7JDV8 | 92.3 | 754 | 34 | 4 | 1 | 730 | 1 | 754 | 0.0e+00 | 1382.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72746 | MS.gene006744 | PPI |
| MS.gene72745 | MS.gene006744 | PPI |
| MS.gene82452 | MS.gene006744 | PPI |
| MS.gene86456 | MS.gene006744 | PPI |
| MS.gene83396 | MS.gene006744 | PPI |
| MS.gene056569 | MS.gene006744 | PPI |
| MS.gene067993 | MS.gene006744 | PPI |
| MS.gene82943 | MS.gene006744 | PPI |
| MS.gene82942 | MS.gene006744 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006744.t1 | MTR_4g080890 | 92.308 | 754 | 34 | 4 | 1 | 730 | 1 | 754 | 0.0 | 1368 |
| MS.gene006744.t1 | MTR_4g080823 | 88.579 | 753 | 62 | 4 | 1 | 729 | 10 | 762 | 0.0 | 1323 |
| MS.gene006744.t1 | MTR_0651s0010 | 90.812 | 653 | 36 | 4 | 1 | 629 | 1 | 653 | 0.0 | 1156 |
| MS.gene006744.t1 | MTR_7g097210 | 55.585 | 743 | 297 | 10 | 4 | 724 | 3 | 734 | 0.0 | 802 |
| MS.gene006744.t1 | MTR_1g075650 | 61.684 | 582 | 173 | 8 | 144 | 724 | 3 | 535 | 0.0 | 716 |
| MS.gene006744.t1 | MTR_7g097210 | 59.756 | 574 | 219 | 7 | 152 | 724 | 2 | 564 | 0.0 | 671 |
| MS.gene006744.t1 | MTR_5g025650 | 42.894 | 781 | 367 | 16 | 12 | 728 | 64 | 829 | 0.0 | 572 |
| MS.gene006744.t1 | MTR_8g072210 | 41.753 | 776 | 364 | 15 | 19 | 728 | 57 | 810 | 0.0 | 550 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene006744.t1 | AT3G23410 | 57.959 | 735 | 274 | 4 | 22 | 727 | 15 | 743 | 0.0 | 843 |
| MS.gene006744.t1 | AT3G23410 | 61.004 | 677 | 255 | 3 | 54 | 727 | 5 | 675 | 0.0 | 832 |
| MS.gene006744.t1 | AT4G28570 | 55.526 | 742 | 305 | 5 | 2 | 724 | 7 | 742 | 0.0 | 817 |
| MS.gene006744.t1 | AT4G28570 | 55.526 | 742 | 305 | 5 | 2 | 724 | 7 | 742 | 0.0 | 817 |
| MS.gene006744.t1 | AT1G03990 | 49.669 | 755 | 338 | 11 | 7 | 729 | 13 | 757 | 0.0 | 731 |
| MS.gene006744.t1 | AT4G19380 | 42.042 | 754 | 375 | 16 | 18 | 728 | 34 | 768 | 0.0 | 536 |
| MS.gene006744.t1 | AT4G19380 | 42.282 | 745 | 368 | 16 | 27 | 728 | 1 | 726 | 3.43e-180 | 532 |
Find 144 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCCCTTGTTTCTCTCCTTT+TGG | 0.180580 | 4.1:+25769655 | None:intergenic |
| GAAGAAATGTTTGGGAGTTT+TGG | 0.193859 | 4.1:-25769521 | MS.gene006744:CDS |
| TGATTCAAGAATACTTATTT+TGG | 0.221568 | 4.1:-25769974 | MS.gene006744:CDS |
| CAACTTCTCAAGCTTGTCTT+TGG | 0.272508 | 4.1:-25770612 | MS.gene006744:CDS |
| TGATTCCCTGGTGAATTTCT+TGG | 0.279412 | 4.1:+25769706 | None:intergenic |
| GCTTGAGAAGTTGCTGATAA+AGG | 0.301467 | 4.1:+25770622 | None:intergenic |
| ATGGACCAACAATATGAAAA+TGG | 0.302883 | 4.1:-25770015 | MS.gene006744:CDS |
| TAAACGAATGCAATTCTAAA+AGG | 0.317923 | 4.1:+25770539 | None:intergenic |
| GTTGATTGAATAGTAATCAT+AGG | 0.337491 | 4.1:+25768264 | None:intergenic |
| CAACAGAAAGAAGAAATGTT+TGG | 0.349734 | 4.1:-25769530 | MS.gene006744:CDS |
| CATTGTTACCAGGTGAGAAT+TGG | 0.351996 | 4.1:-25768437 | MS.gene006744:CDS |
| GTTATGAAGTGTGCTGTTCT+TGG | 0.357460 | 4.1:+25768702 | None:intergenic |
| GCACTATATCCATGGGAATC+AGG | 0.366958 | 4.1:-25768756 | MS.gene006744:CDS |
| TTCTAGTGATGAATAATCTT+CGG | 0.371885 | 4.1:+25770047 | None:intergenic |
| TATTGCGGTTCATGTGGTTA+TGG | 0.374019 | 4.1:-25769682 | MS.gene006744:CDS |
| AGAAAAGGGTGTCAAAATCT+TGG | 0.379576 | 4.1:-25769748 | MS.gene006744:CDS |
| TTGGGCACTTTCTTGATTTG+TGG | 0.380021 | 4.1:-25770671 | MS.gene006744:CDS |
| GTATACTTCTGCTCATCAAA+TGG | 0.389845 | 4.1:-25768409 | MS.gene006744:CDS |
| TATACTTCTGCTCATCAAAT+GGG | 0.393187 | 4.1:-25768408 | MS.gene006744:CDS |
| TATCCAATGGCTTTCCATGC+TGG | 0.395200 | 4.1:+25770348 | None:intergenic |
| AACAGAAAGAAGAAATGTTT+GGG | 0.405430 | 4.1:-25769529 | MS.gene006744:CDS |
| CAAAATCAAGTATTAAGAAA+AGG | 0.411212 | 4.1:-25769763 | MS.gene006744:CDS |
| TTTGAAAATAGCTACAAGAA+TGG | 0.416910 | 4.1:-25769556 | MS.gene006744:CDS |
| TCTAGTGATGAATAATCTTC+GGG | 0.422485 | 4.1:+25770048 | None:intergenic |
| TGTGGTTATGGTTGTCCAAA+AGG | 0.434505 | 4.1:-25769670 | MS.gene006744:CDS |
| CTTGAGAAGTTGCTGATAAA+GGG | 0.437565 | 4.1:+25770623 | None:intergenic |
| TTCAATTATTGCTCTTGTAT+CGG | 0.438986 | 4.1:+25768809 | None:intergenic |
| CTTGTAGATGCTGTTGAAAA+AGG | 0.445193 | 4.1:-25769619 | MS.gene006744:CDS |
| GAAGGTGCTGTTGATGAAAA+TGG | 0.445503 | 4.1:-25768357 | MS.gene006744:CDS |
| TTGATGATGATGGTACTCTA+TGG | 0.447920 | 4.1:+25768847 | None:intergenic |
| GTAATTGTTGGTTCTGGCTG+TGG | 0.452941 | 4.1:-25770147 | MS.gene006744:CDS |
| GTGGTGGTTCAGCTGTTAAT+TGG | 0.455365 | 4.1:-25769936 | MS.gene006744:CDS |
| TGGCTTCTAGCAACGAGGTT+GGG | 0.458420 | 4.1:-25770689 | MS.gene006744:CDS |
| TGCTATGTCTCAGTAAGAAA+TGG | 0.464395 | 4.1:-25770646 | MS.gene006744:CDS |
| AAAATCAAGTATTAAGAAAA+GGG | 0.465765 | 4.1:-25769762 | MS.gene006744:CDS |
| TCATATTGTTGGTCCATTGA+AGG | 0.466560 | 4.1:+25770021 | None:intergenic |
| AAAGGTGCTGTGATAATAAC+AGG | 0.471872 | 4.1:-25769601 | MS.gene006744:CDS |
| CATATTCAGCACTATATCCA+TGG | 0.471948 | 4.1:-25768764 | MS.gene006744:CDS |
| TATGTTTCCTTCACTGCCAA+TGG | 0.474427 | 4.1:-25771741 | MS.gene006744:CDS |
| GATGCGGTAATTGTTGGTTC+TGG | 0.474625 | 4.1:-25770153 | MS.gene006744:CDS |
| TCAAATGGGGAGTTGTAGAA+TGG | 0.477133 | 4.1:-25768394 | MS.gene006744:CDS |
| TTGCATTAAAACACCAGAAA+AGG | 0.481522 | 4.1:-25769908 | MS.gene006744:CDS |
| GTTGGTTCTGGCTGTGGAGG+AGG | 0.482681 | 4.1:-25770141 | MS.gene006744:CDS |
| GGTAACAATGCTCCTTCCAT+TGG | 0.483905 | 4.1:+25768450 | None:intergenic |
| CAGAAAAGGTGTTGAAAGAA+TGG | 0.485140 | 4.1:-25769894 | MS.gene006744:CDS |
| CTTGATTCATCATCATCCAT+TGG | 0.494921 | 4.1:+25771725 | None:intergenic |
| TGATGAAAATGGTGAGAGTT+GGG | 0.496388 | 4.1:-25768346 | MS.gene006744:CDS |
| CCTAACAGGTAAAGCGAATG+AGG | 0.496951 | 4.1:-25768889 | MS.gene006744:intron |
| CATAGAGTATCTATCTGCTA+TGG | 0.499902 | 4.1:-25769839 | MS.gene006744:CDS |
| GCAGGTTCAACAGTAGGTGG+TGG | 0.500248 | 4.1:-25769952 | MS.gene006744:CDS |
| AAATGTGATGCGGTAATTGT+TGG | 0.502713 | 4.1:-25770159 | MS.gene006744:CDS |
| ATTGTTGGTTCTGGCTGTGG+AGG | 0.505457 | 4.1:-25770144 | MS.gene006744:CDS |
| GAAGATTATTCATCACTAGA+AGG | 0.507111 | 4.1:-25770045 | MS.gene006744:CDS |
| AAAGTGGTTGTTCTAGAGAA+AGG | 0.509206 | 4.1:-25770084 | MS.gene006744:CDS |
| GAATCATCATTTGATGATGA+TGG | 0.513986 | 4.1:+25768837 | None:intergenic |
| ATCACTAGAAGGTCCTTCAA+TGG | 0.515670 | 4.1:-25770034 | MS.gene006744:CDS |
| AGTGTGCTTCCAACTGCTGT+TGG | 0.516894 | 4.1:-25768294 | MS.gene006744:CDS |
| TAATGAGAACACTAGCGAAA+AGG | 0.517011 | 4.1:-25768502 | MS.gene006744:CDS |
| TGCTGAGATGTTAGCAAAGA+GGG | 0.518378 | 4.1:-25770750 | MS.gene006744:CDS |
| AGAAGAAAACAAAGAGGCAT+AGG | 0.523278 | 4.1:+25770507 | None:intergenic |
| AGAAGGAAAGAAAGATGAGA+AGG | 0.523803 | 4.1:-25771862 | None:intergenic |
| GCAGCAGGAGCAGTTGAAGT+AGG | 0.525512 | 4.1:-25768558 | MS.gene006744:CDS |
| CTGAGAATTCTAATAGCAGC+AGG | 0.529888 | 4.1:-25768573 | MS.gene006744:CDS |
| AATGAAAATTGTACACAAGA+AGG | 0.531263 | 4.1:-25769790 | MS.gene006744:CDS |
| TCATCATCCATTGGCAGTGA+AGG | 0.531597 | 4.1:+25771734 | None:intergenic |
| TTGATTGAATAGTAATCATA+GGG | 0.531890 | 4.1:+25768265 | None:intergenic |
| TGGAGTCTAGTGTGACATTG+AGG | 0.534001 | 4.1:+25770202 | None:intergenic |
| TGTTGATACTTCATATCCAA+TGG | 0.534466 | 4.1:+25770335 | None:intergenic |
| AATCCAGCATGGAAAGCCAT+TGG | 0.536851 | 4.1:-25770351 | MS.gene006744:CDS |
| ATAATTGAAACACCATTACT+AGG | 0.540718 | 4.1:-25768795 | MS.gene006744:CDS |
| TATAGATAGTGTTTATCCAA+TGG | 0.540962 | 4.1:-25768466 | MS.gene006744:CDS |
| ATGGCTTCTAGCAACGAGGT+TGG | 0.542866 | 4.1:-25770690 | MS.gene006744:CDS |
| TTGATGAAAATGGTGAGAGT+TGG | 0.551525 | 4.1:-25768347 | MS.gene006744:CDS |
| AAGAGAAAAGATTGTGCAGA+GGG | 0.551533 | 4.1:-25770585 | MS.gene006744:CDS |
| CAAATGGGGAGTTGTAGAAT+GGG | 0.552016 | 4.1:-25768393 | MS.gene006744:CDS |
| TTCATCCCGTGCTAATGACA+TGG | 0.554731 | 4.1:-25769357 | MS.gene006744:CDS |
| GGGTTAACACCAACAGCAGT+TGG | 0.556806 | 4.1:+25768285 | None:intergenic |
| GCTTCTGTCCTATCAAAAGC+TGG | 0.558239 | 4.1:-25770111 | MS.gene006744:CDS |
| AAACCGCTAGAAATCATCAA+TGG | 0.561746 | 4.1:+25769412 | None:intergenic |
| TATCCCCATGTCATTAGCAC+GGG | 0.567787 | 4.1:+25769352 | None:intergenic |
| GACAAAGAGAATATGAGAGC+TGG | 0.568725 | 4.1:-25768609 | MS.gene006744:CDS |
| GCAAAAGTAACAATTTCAGC+AGG | 0.569600 | 4.1:-25769454 | MS.gene006744:CDS |
| TTAGCACGGGATGAAGATGA+AGG | 0.570366 | 4.1:+25769365 | None:intergenic |
| TAGTCTAGTCCTGATTCCCA+TGG | 0.571034 | 4.1:+25768747 | None:intergenic |
| GGTGAGAGTTGGGAAGCTGA+AGG | 0.571561 | 4.1:-25768336 | MS.gene006744:CDS |
| GAACCGCAATAATGATTCCC+TGG | 0.572649 | 4.1:+25769694 | None:intergenic |
| GTGAGAGTTGGGAAGCTGAA+GGG | 0.574364 | 4.1:-25768335 | MS.gene006744:CDS |
| ATGGAAGGAGCATTGTTACC+AGG | 0.577349 | 4.1:-25768447 | MS.gene006744:CDS |
| GACCAACAATATGAAAATGG+AGG | 0.578079 | 4.1:-25770012 | MS.gene006744:CDS |
| TCATCCCGTGCTAATGACAT+GGG | 0.581174 | 4.1:-25769356 | MS.gene006744:CDS |
| GGGAGTGTCATCCATTGTTG+AGG | 0.581648 | 4.1:-25771841 | MS.gene006744:CDS |
| TAGAATGGGAGTGAATGAAA+AGG | 0.583569 | 4.1:-25768379 | MS.gene006744:CDS |
| TCTCTCACACCCCTCAACAA+TGG | 0.586246 | 4.1:+25771830 | None:intergenic |
| CGATTGAATTCAATTTGTAG+CGG | 0.586554 | 4.1:+25768631 | None:intergenic |
| AACAAGGGACTCAAGTTACA+TGG | 0.588903 | 4.1:-25769642 | MS.gene006744:CDS |
| GATAGTGTTTATCCAATGGA+AGG | 0.590334 | 4.1:-25768462 | MS.gene006744:CDS |
| TACAAATTCCAATTCTCACC+TGG | 0.591010 | 4.1:+25768429 | None:intergenic |
| TTGGCAGGTTCAACAGTAGG+TGG | 0.592216 | 4.1:-25769955 | MS.gene006744:CDS |
| GGAGTGTCATCCATTGTTGA+GGG | 0.596554 | 4.1:-25771840 | MS.gene006744:CDS |
| AAAGTAACAATTTCAGCAGG+TGG | 0.598692 | 4.1:-25769451 | MS.gene006744:CDS |
| AGTTGTGTCATGTTCATGCA+TGG | 0.599087 | 4.1:+25770251 | None:intergenic |
| GAAACTGTGTGTGAGAGGAT+TGG | 0.599841 | 4.1:-25769817 | MS.gene006744:CDS |
| CTATGGAAACTGTGTGTGAG+AGG | 0.600732 | 4.1:-25769822 | MS.gene006744:CDS |
| TTCTTGAATCAATAGAAGCT+AGG | 0.600875 | 4.1:+25769986 | None:intergenic |
| GAAGGAAAGAAAGATGAGAA+GGG | 0.601594 | 4.1:-25771861 | None:intergenic |
| AATCATTATTGCGGTTCATG+TGG | 0.601601 | 4.1:-25769688 | MS.gene006744:CDS |
| GTATCCCCATGTCATTAGCA+CGG | 0.602417 | 4.1:+25769351 | None:intergenic |
| ACCAACAATATGAAAATGGA+GGG | 0.602438 | 4.1:-25770011 | MS.gene006744:CDS |
| ATATTCAGCACTATATCCAT+GGG | 0.603766 | 4.1:-25768763 | MS.gene006744:CDS |
| CAACAATCTCTATCTAACAA+AGG | 0.604364 | 4.1:-25770225 | MS.gene006744:CDS |
| TTGGCAAAGACTTTAAGTAG+TGG | 0.611941 | 4.1:-25769502 | MS.gene006744:CDS |
| GGTGGAAAAGTAACAACAGA+GGG | 0.613491 | 4.1:-25768660 | MS.gene006744:CDS |
| TATAGTGCTGAATATGATGA+TGG | 0.622796 | 4.1:+25768771 | None:intergenic |
| TGTCCAAAAGGAGAGAAACA+AGG | 0.624436 | 4.1:-25769658 | MS.gene006744:CDS |
| ACAATAATAAGAGACAAAGC+AGG | 0.625178 | 4.1:-25768681 | MS.gene006744:CDS |
| ATCAAAAGCTGGCTACAAAG+TGG | 0.627865 | 4.1:-25770100 | MS.gene006744:CDS |
| TCACCAGGGAATCATTATTG+CGG | 0.628148 | 4.1:-25769697 | MS.gene006744:CDS |
| CTAACAGGTAAAGCGAATGA+GGG | 0.633458 | 4.1:-25768888 | MS.gene006744:intron |
| GAATCAAAATCAGATCTCAA+AGG | 0.635229 | 4.1:-25769322 | MS.gene006744:intron |
| ATGGGAGTGAATGAAAAGGA+AGG | 0.638461 | 4.1:-25768375 | MS.gene006744:CDS |
| GAAGTAGGAACACACAGAAG+TGG | 0.639178 | 4.1:-25768543 | MS.gene006744:CDS |
| CCCAAGAGAAGAAAACAAAG+AGG | 0.641068 | 4.1:+25770501 | None:intergenic |
| TTGCTGAGATGTTAGCAAAG+AGG | 0.642160 | 4.1:-25770751 | MS.gene006744:CDS |
| AAAATGGTGATAATCCAGCA+TGG | 0.647627 | 4.1:-25770362 | MS.gene006744:CDS |
| TATGATGATGGTCCTAGTAA+TGG | 0.648405 | 4.1:+25768783 | None:intergenic |
| CCTCAAAATCAAATGTGATG+CGG | 0.648723 | 4.1:-25770169 | MS.gene006744:CDS |
| ATAATAAGAGACAAAGCAGG+TGG | 0.649057 | 4.1:-25768678 | MS.gene006744:CDS |
| CCGCTAGAAATCATCAATGG+AGG | 0.650624 | 4.1:+25769415 | None:intergenic |
| ACAGGTAAAGCGAATGAGGG+AGG | 0.655166 | 4.1:-25768885 | MS.gene006744:intron |
| CCTCCATTGATGATTTCTAG+CGG | 0.656669 | 4.1:-25769415 | MS.gene006744:CDS |
| GAGAATCGCAAATACAAACA+TGG | 0.657233 | 4.1:-25771809 | MS.gene006744:CDS |
| ATCGCTCACAAGCATATGTG+AGG | 0.657257 | 4.1:-25771765 | MS.gene006744:CDS |
| GGTGTTGAAAGAATGGTCAG+AGG | 0.659062 | 4.1:-25769887 | MS.gene006744:CDS |
| GTCCAAAAGGAGAGAAACAA+GGG | 0.659274 | 4.1:-25769657 | MS.gene006744:CDS |
| TATGTGCCAAGAAATTCACC+AGG | 0.661064 | 4.1:-25769712 | MS.gene006744:CDS |
| GTAGGAACACACAGAAGTGG+TGG | 0.662276 | 4.1:-25768540 | MS.gene006744:CDS |
| ATACTTCTGCTCATCAAATG+GGG | 0.665706 | 4.1:-25768407 | MS.gene006744:CDS |
| GGATGATGATGAATCAAGCA+AGG | 0.668966 | 4.1:-25771720 | MS.gene006744:CDS |
| AAAGAGAAAAGATTGTGCAG+AGG | 0.669869 | 4.1:-25770586 | MS.gene006744:CDS |
| GAGTGTCATCCATTGTTGAG+GGG | 0.685569 | 4.1:-25771839 | MS.gene006744:CDS |
| TAACAGGATGCAAAGCTGAG+AGG | 0.688213 | 4.1:-25769585 | MS.gene006744:CDS |
| CATCCCGTGCTAATGACATG+GGG | 0.693536 | 4.1:-25769355 | MS.gene006744:CDS |
| AGGTGGAAAAGTAACAACAG+AGG | 0.719048 | 4.1:-25768661 | MS.gene006744:CDS |
| ATGTGCCAAGAAATTCACCA+GGG | 0.759136 | 4.1:-25769711 | MS.gene006744:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAACTATTTTTTTTTGTT+AGG | + | chr4.1:25768647-25768666 | None:intergenic | 10.0% |
| !! | AAAATCAAGTATTAAGAAAA+GGG | - | chr4.1:25770292-25770311 | MS.gene006744:CDS | 15.0% |
| !! | ATAATTAATCATTATTGAGT+TGG | - | chr4.1:25768996-25769015 | MS.gene006744:intron | 15.0% |
| !! | TAATTAATCATTATTGAGTT+GGG | - | chr4.1:25768997-25769016 | MS.gene006744:intron | 15.0% |
| !! | TGTCATAAAGTTTATAAATT+TGG | - | chr4.1:25769030-25769049 | MS.gene006744:intron | 15.0% |
| !!! | AAGTGTTTTTTCTAAATATT+TGG | + | chr4.1:25768945-25768964 | None:intergenic | 15.0% |
| !!! | ATCATGTTATAAATTTTGAA+TGG | - | chr4.1:25769273-25769292 | MS.gene006744:intron | 15.0% |
| !!! | TAATTTTTTTTTTTCTTCCT+AGG | - | chr4.1:25771110-25771129 | MS.gene006744:intron | 15.0% |
| !!! | TTTTTTTATAAACATGGTAT+TGG | - | chr4.1:25770803-25770822 | MS.gene006744:intron | 15.0% |
| !! | CAAAATCAAGTATTAAGAAA+AGG | - | chr4.1:25770291-25770310 | MS.gene006744:CDS | 20.0% |
| !! | GGTTTAAAGAATAAAAACAT+TGG | - | chr4.1:25770660-25770679 | MS.gene006744:CDS | 20.0% |
| !! | TTATAAACTTTATGACAACT+TGG | + | chr4.1:25769027-25769046 | None:intergenic | 20.0% |
| !! | TTGATTGAATAGTAATCATA+GGG | + | chr4.1:25771792-25771811 | None:intergenic | 20.0% |
| !!! | ATTTTCCAACCTTATTTTTA+AGG | - | chr4.1:25769138-25769157 | MS.gene006744:intron | 20.0% |
| !!! | CTTTTCTTAATACTTGATTT+TGG | + | chr4.1:25770293-25770312 | None:intergenic | 20.0% |
| !!! | GTTTAATTTTGATGAATTGT+TGG | + | chr4.1:25769619-25769638 | None:intergenic | 20.0% |
| !!! | TATTGATTAGAGTGATTTTA+TGG | - | chr4.1:25769345-25769364 | MS.gene006744:CDS | 20.0% |
| !!! | TGATTCAAGAATACTTATTT+TGG | - | chr4.1:25770080-25770099 | MS.gene006744:CDS | 20.0% |
| !!! | TTCTATAATTCCTTTTTCAA+GGG | + | chr4.1:25769782-25769801 | None:intergenic | 20.0% |
| !!! | TTTCTATAATTCCTTTTTCA+AGG | + | chr4.1:25769783-25769802 | None:intergenic | 20.0% |
| ! | AAATAAGGTTGGAAAATGAT+TGG | + | chr4.1:25769135-25769154 | None:intergenic | 25.0% |
| ! | AACAGAAAGAAGAAATGTTT+GGG | - | chr4.1:25770525-25770544 | MS.gene006744:CDS | 25.0% |
| ! | AACATATTGGAACATAAATG+TGG | + | chr4.1:25768548-25768567 | None:intergenic | 25.0% |
| ! | AATGAAAATTGTACACAAGA+AGG | - | chr4.1:25770264-25770283 | MS.gene006744:CDS | 25.0% |
| ! | ACATATTGGAACATAAATGT+GGG | + | chr4.1:25768547-25768566 | None:intergenic | 25.0% |
| ! | ATAATTGAAACACCATTACT+AGG | - | chr4.1:25771259-25771278 | MS.gene006744:intron | 25.0% |
| ! | CAATACCTTAAAAATAAGGT+TGG | + | chr4.1:25769146-25769165 | None:intergenic | 25.0% |
| ! | CCAACAATACCTTAAAAATA+AGG | + | chr4.1:25769150-25769169 | None:intergenic | 25.0% |
| ! | GTATGTATGTATGTATTCAT+CGG | - | chr4.1:25768414-25768433 | MS.gene006744:CDS | 25.0% |
| ! | GTTGATTGAATAGTAATCAT+AGG | + | chr4.1:25771793-25771812 | None:intergenic | 25.0% |
| ! | TAAACGAATGCAATTCTAAA+AGG | + | chr4.1:25769518-25769537 | None:intergenic | 25.0% |
| ! | TATACCAATACTTAAGAAAG+TGG | - | chr4.1:25769651-25769670 | MS.gene006744:CDS | 25.0% |
| ! | TATAGATAGTGTTTATCCAA+TGG | - | chr4.1:25771588-25771607 | MS.gene006744:intron | 25.0% |
| ! | TTCAATTATTGCTCTTGTAT+CGG | + | chr4.1:25771248-25771267 | None:intergenic | 25.0% |
| ! | TTCTAGTGATGAATAATCTT+CGG | + | chr4.1:25770010-25770029 | None:intergenic | 25.0% |
| ! | TTTGAAAATAGCTACAAGAA+TGG | - | chr4.1:25770498-25770517 | MS.gene006744:intron | 25.0% |
| !! | AATAGGATTGTAGATTTTCT+TGG | - | chr4.1:25771829-25771848 | MS.gene006744:CDS | 25.0% |
| !! | ATTGTAGATTTTCTTGGAAA+GGG | - | chr4.1:25771835-25771854 | MS.gene006744:CDS | 25.0% |
| !! | CTGCATTTTGTATTTCAAAT+AGG | - | chr4.1:25771812-25771831 | MS.gene006744:CDS | 25.0% |
| !! | GTGTAAATTCTTTTATAGCA+AGG | + | chr4.1:25769597-25769616 | None:intergenic | 25.0% |
| !! | TATAAATTTTGAATGGCAAC+AGG | - | chr4.1:25769280-25769299 | MS.gene006744:intron | 25.0% |
| !!! | ATTTTGTAGGTTGATGAAAA+TGG | - | chr4.1:25769676-25769695 | MS.gene006744:CDS | 25.0% |
| !!! | CCTTATTTTTAAGGTATTGT+TGG | - | chr4.1:25769147-25769166 | MS.gene006744:intron | 25.0% |
| !!! | TCTATAATTCCTTTTTCAAG+GGG | + | chr4.1:25769781-25769800 | None:intergenic | 25.0% |
| !!! | TGTAACACATAAGTTTTTTG+TGG | - | chr4.1:25768740-25768759 | MS.gene006744:CDS | 25.0% |
| !!! | TTTTAGGTGCATATTTTGTT+AGG | - | chr4.1:25768705-25768724 | MS.gene006744:CDS | 25.0% |
| ACAATAATAAGAGACAAAGC+AGG | - | chr4.1:25771373-25771392 | MS.gene006744:intron | 30.0% | |
| ACCAACAATATGAAAATGGA+GGG | - | chr4.1:25770043-25770062 | MS.gene006744:CDS | 30.0% | |
| ATATTCAGCACTATATCCAT+GGG | - | chr4.1:25771291-25771310 | MS.gene006744:intron | 30.0% | |
| ATGGACCAACAATATGAAAA+TGG | - | chr4.1:25770039-25770058 | MS.gene006744:CDS | 30.0% | |
| ATGTCCACTTTCTTAAGTAT+TGG | + | chr4.1:25769658-25769677 | None:intergenic | 30.0% | |
| CAACAATCTCTATCTAACAA+AGG | - | chr4.1:25769829-25769848 | MS.gene006744:CDS | 30.0% | |
| CAACAGAAAGAAGAAATGTT+TGG | - | chr4.1:25770524-25770543 | MS.gene006744:CDS | 30.0% | |
| CGATTGAATTCAATTTGTAG+CGG | + | chr4.1:25771426-25771445 | None:intergenic | 30.0% | |
| GAAGATTATTCATCACTAGA+AGG | - | chr4.1:25770009-25770028 | MS.gene006744:CDS | 30.0% | |
| GAATCAAAATCAGATCTCAA+AGG | - | chr4.1:25770732-25770751 | MS.gene006744:CDS | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | + | chr4.1:25768788-25768807 | None:intergenic | 30.0% | |
| TATACTTCTGCTCATCAAAT+GGG | - | chr4.1:25771646-25771665 | MS.gene006744:intron | 30.0% | |
| TCTAGTGATGAATAATCTTC+GGG | + | chr4.1:25770009-25770028 | None:intergenic | 30.0% | |
| TGTTGATACTTCATATCCAA+TGG | + | chr4.1:25769722-25769741 | None:intergenic | 30.0% | |
| TTCTTGAATCAATAGAAGCT+AGG | + | chr4.1:25770071-25770090 | None:intergenic | 30.0% | |
| TTGCATTAAAACACCAGAAA+AGG | - | chr4.1:25770146-25770165 | MS.gene006744:CDS | 30.0% | |
| ! | ATACAAACATGGATTTTCTG+TGG | - | chr4.1:25768256-25768275 | MS.gene006744:CDS | 30.0% |
| ! | GATTGTAGATTTTCTTGGAA+AGG | - | chr4.1:25771834-25771853 | MS.gene006744:CDS | 30.0% |
| ! | TAAGAAAGTGGACATTTTGT+AGG | - | chr4.1:25769663-25769682 | MS.gene006744:CDS | 30.0% |
| ! | TATAGTGCTGAATATGATGA+TGG | + | chr4.1:25771286-25771305 | None:intergenic | 30.0% |
| !! | GAATCATCATTTGATGATGA+TGG | + | chr4.1:25771220-25771239 | None:intergenic | 30.0% |
| !! | GCTATATTTGTTTTCAGTCA+AGG | - | chr4.1:25768589-25768608 | MS.gene006744:CDS | 30.0% |
| !!! | AACACATAAGTTTTTTGTGG+TGG | - | chr4.1:25768743-25768762 | MS.gene006744:CDS | 30.0% |
| !!! | TCAAGAATACTTATTTTGGC+AGG | - | chr4.1:25770084-25770103 | MS.gene006744:CDS | 30.0% |
| !!! | TTGAGATCTGATTTTGATTC+TGG | + | chr4.1:25770732-25770751 | None:intergenic | 30.0% |
| AAAAAGAGACCCCTTGAAAA+AGG | - | chr4.1:25769769-25769788 | MS.gene006744:CDS | 35.0% | |
| AAAATGGTGATAATCCAGCA+TGG | - | chr4.1:25769692-25769711 | MS.gene006744:CDS | 35.0% | |
| AAACCGCTAGAAATCATCAA+TGG | + | chr4.1:25770645-25770664 | None:intergenic | 35.0% | |
| AAAGAGAAAAGATTGTGCAG+AGG | - | chr4.1:25769468-25769487 | MS.gene006744:CDS | 35.0% | |
| AAAGTAACAATTTCAGCAGG+TGG | - | chr4.1:25770603-25770622 | MS.gene006744:CDS | 35.0% | |
| AAATGTGATGCGGTAATTGT+TGG | - | chr4.1:25769895-25769914 | MS.gene006744:CDS | 35.0% | |
| AAGAGAAAAGATTGTGCAGA+GGG | - | chr4.1:25769469-25769488 | MS.gene006744:CDS | 35.0% | |
| AATCATTATTGCGGTTCATG+TGG | - | chr4.1:25770366-25770385 | MS.gene006744:CDS | 35.0% | |
| AATCCAGTAAACAATGTCTC+AGG | + | chr4.1:25770885-25770904 | None:intergenic | 35.0% | |
| ATAATAAGAGACAAAGCAGG+TGG | - | chr4.1:25771376-25771395 | MS.gene006744:intron | 35.0% | |
| ATACTTCTGCTCATCAAATG+GGG | - | chr4.1:25771647-25771666 | MS.gene006744:intron | 35.0% | |
| CATAAAATATGCAAGGTCTG+AGG | + | chr4.1:25768781-25768800 | None:intergenic | 35.0% | |
| CATATTCAGCACTATATCCA+TGG | - | chr4.1:25771290-25771309 | MS.gene006744:intron | 35.0% | |
| CATGTATCGCTAAATCATGT+AGG | - | chr4.1:25771023-25771042 | MS.gene006744:intron | 35.0% | |
| CCTCAAAATCAAATGTGATG+CGG | - | chr4.1:25769885-25769904 | MS.gene006744:CDS | 35.0% | |
| CTTGAGAAGTTGCTGATAAA+GGG | + | chr4.1:25769434-25769453 | None:intergenic | 35.0% | |
| CTTGATTCATCATCATCCAT+TGG | + | chr4.1:25768332-25768351 | None:intergenic | 35.0% | |
| CTTGTAGATGCTGTTGAAAA+AGG | - | chr4.1:25770435-25770454 | MS.gene006744:intron | 35.0% | |
| GACCAACAATATGAAAATGG+AGG | - | chr4.1:25770042-25770061 | MS.gene006744:CDS | 35.0% | |
| GAGAATCGCAAATACAAACA+TGG | - | chr4.1:25768245-25768264 | MS.gene006744:CDS | 35.0% | |
| GATAGTGTTTATCCAATGGA+AGG | - | chr4.1:25771592-25771611 | MS.gene006744:intron | 35.0% | |
| GCAAAAGTAACAATTTCAGC+AGG | - | chr4.1:25770600-25770619 | MS.gene006744:CDS | 35.0% | |
| GTATACTTCTGCTCATCAAA+TGG | - | chr4.1:25771645-25771664 | MS.gene006744:intron | 35.0% | |
| TAATGAGAACACTAGCGAAA+AGG | - | chr4.1:25771552-25771571 | MS.gene006744:intron | 35.0% | |
| TACAAATTCCAATTCTCACC+TGG | + | chr4.1:25771628-25771647 | None:intergenic | 35.0% | |
| TAGAATGGGAGTGAATGAAA+AGG | - | chr4.1:25771675-25771694 | MS.gene006744:intron | 35.0% | |
| TCATATTGTTGGTCCATTGA+AGG | + | chr4.1:25770036-25770055 | None:intergenic | 35.0% | |
| TGATGAAAATGGTGAGAGTT+GGG | - | chr4.1:25771708-25771727 | MS.gene006744:intron | 35.0% | |
| TGCTATGTCTCAGTAAGAAA+TGG | - | chr4.1:25769408-25769427 | MS.gene006744:CDS | 35.0% | |
| TTCCATTCAGGAACTTCTTT+CGG | + | chr4.1:25768492-25768511 | None:intergenic | 35.0% | |
| TTGATGAAAATGGTGAGAGT+TGG | - | chr4.1:25771707-25771726 | MS.gene006744:intron | 35.0% | |
| TTGGCAAAGACTTTAAGTAG+TGG | - | chr4.1:25770552-25770571 | MS.gene006744:CDS | 35.0% | |
| ! | AGAAGAAAACAAAGAGGCAT+AGG | + | chr4.1:25769550-25769569 | None:intergenic | 35.0% |
| ! | AGTTCAGCTAAAAGGTTTTC+TGG | + | chr4.1:25769180-25769199 | None:intergenic | 35.0% |
| ! | CATAGAGTATCTATCTGCTA+TGG | - | chr4.1:25770215-25770234 | MS.gene006744:CDS | 35.0% |
| ! | CATTCTTTCAACACCTTTTC+TGG | + | chr4.1:25770162-25770181 | None:intergenic | 35.0% |
| ! | GAAGAAATGTTTGGGAGTTT+TGG | - | chr4.1:25770533-25770552 | MS.gene006744:CDS | 35.0% |
| ! | GCGAGCTAATCTATAGTTTT+AGG | - | chr4.1:25768689-25768708 | MS.gene006744:CDS | 35.0% |
| ! | GTTGTTCAAGTTCAGCTAAA+AGG | + | chr4.1:25769188-25769207 | None:intergenic | 35.0% |
| ! | TCCCTCCATTTTCATATTGT+TGG | + | chr4.1:25770047-25770066 | None:intergenic | 35.0% |
| !! | AAAGGTGCTGTGATAATAAC+AGG | - | chr4.1:25770453-25770472 | MS.gene006744:intron | 35.0% |
| !! | AAAGTGGTTGTTCTAGAGAA+AGG | - | chr4.1:25769970-25769989 | MS.gene006744:CDS | 35.0% |
| !! | AGAAAAGGGTGTCAAAATCT+TGG | - | chr4.1:25770306-25770325 | MS.gene006744:CDS | 35.0% |
| !! | CAGAAAAGGTGTTGAAAGAA+TGG | - | chr4.1:25770160-25770179 | MS.gene006744:CDS | 35.0% |
| !! | TATGATGATGGTCCTAGTAA+TGG | + | chr4.1:25771274-25771293 | None:intergenic | 35.0% |
| !! | TTGATGATGATGGTACTCTA+TGG | + | chr4.1:25771210-25771229 | None:intergenic | 35.0% |
| !!! | ATAAGTTTTTTGTGGTGGTC+GGG | - | chr4.1:25768748-25768767 | MS.gene006744:CDS | 35.0% |
| !!! | CATAAGTTTTTTGTGGTGGT+CGG | - | chr4.1:25768747-25768766 | MS.gene006744:CDS | 35.0% |
| !!! | CCTCTTTGTTTTCTTCTCTT+GGG | - | chr4.1:25769553-25769572 | MS.gene006744:CDS | 35.0% |
| !!! | GATTTTGAGGATGTTGCTTT+TGG | + | chr4.1:25769875-25769894 | None:intergenic | 35.0% |
| !!! | TTTTTCAAGGGGTCTCTTTT+TGG | + | chr4.1:25769770-25769789 | None:intergenic | 35.0% |
| AACAAGGGACTCAAGTTACA+TGG | - | chr4.1:25770412-25770431 | MS.gene006744:intron | 40.0% | |
| AAGTTCCTGAATGGAATGCA+AGG | - | chr4.1:25768496-25768515 | MS.gene006744:CDS | 40.0% | |
| ACATACATACATACCTCGTC+AGG | + | chr4.1:25768404-25768423 | None:intergenic | 40.0% | |
| AGCAGCTACGTGTAACATAT+TGG | + | chr4.1:25768561-25768580 | None:intergenic | 40.0% | |
| AGGTGGAAAAGTAACAACAG+AGG | - | chr4.1:25771393-25771412 | MS.gene006744:intron | 40.0% | |
| AGTTGTGTCATGTTCATGCA+TGG | + | chr4.1:25769806-25769825 | None:intergenic | 40.0% | |
| ATCAAAAGCTGGCTACAAAG+TGG | - | chr4.1:25769954-25769973 | MS.gene006744:CDS | 40.0% | |
| ATCACTAGAAGGTCCTTCAA+TGG | - | chr4.1:25770020-25770039 | MS.gene006744:CDS | 40.0% | |
| ATCCGAAAGAAGTTCCTGAA+TGG | - | chr4.1:25768487-25768506 | MS.gene006744:CDS | 40.0% | |
| ATGGGAGTGAATGAAAAGGA+AGG | - | chr4.1:25771679-25771698 | MS.gene006744:intron | 40.0% | |
| ATGTGCCAAGAAATTCACCA+GGG | - | chr4.1:25770343-25770362 | MS.gene006744:CDS | 40.0% | |
| CAAATGGGGAGTTGTAGAAT+GGG | - | chr4.1:25771661-25771680 | MS.gene006744:intron | 40.0% | |
| CAACTTCTCAAGCTTGTCTT+TGG | - | chr4.1:25769442-25769461 | MS.gene006744:CDS | 40.0% | |
| CATACATACATACCTCGTCA+GGG | + | chr4.1:25768403-25768422 | None:intergenic | 40.0% | |
| CATTGTTACCAGGTGAGAAT+TGG | - | chr4.1:25771617-25771636 | MS.gene006744:intron | 40.0% | |
| CCCAAGAGAAGAAAACAAAG+AGG | + | chr4.1:25769556-25769575 | None:intergenic | 40.0% | |
| CTAACAGGTAAAGCGAATGA+GGG | - | chr4.1:25771166-25771185 | MS.gene006744:intron | 40.0% | |
| CTGAGAATTCTAATAGCAGC+AGG | - | chr4.1:25771481-25771500 | MS.gene006744:intron | 40.0% | |
| CTTTACCTGTTAGGAATCAC+AGG | + | chr4.1:25771159-25771178 | None:intergenic | 40.0% | |
| CTTTCCCGATAATTAGTGTC+TGG | - | chr4.1:25770843-25770862 | MS.gene006744:intron | 40.0% | |
| GAACCTGAGACATTGTTTAC+TGG | - | chr4.1:25770879-25770898 | MS.gene006744:intron | 40.0% | |
| GACAAAGAGAATATGAGAGC+TGG | - | chr4.1:25771445-25771464 | MS.gene006744:intron | 40.0% | |
| GAGACCAGACACTAATTATC+GGG | + | chr4.1:25770850-25770869 | None:intergenic | 40.0% | |
| GCTTGAGAAGTTGCTGATAA+AGG | + | chr4.1:25769435-25769454 | None:intergenic | 40.0% | |
| GGAGACCAGACACTAATTAT+CGG | + | chr4.1:25770851-25770870 | None:intergenic | 40.0% | |
| GGTGGAAAAGTAACAACAGA+GGG | - | chr4.1:25771394-25771413 | MS.gene006744:intron | 40.0% | |
| GTCCAAAAGGAGAGAAACAA+GGG | - | chr4.1:25770397-25770416 | MS.gene006744:intron | 40.0% | |
| TAAACAATGTCTCAGGTTCG+AGG | + | chr4.1:25770878-25770897 | None:intergenic | 40.0% | |
| TAGATGAAGATTCAGCTCCT+AGG | + | chr4.1:25771130-25771149 | None:intergenic | 40.0% | |
| TATGTGCCAAGAAATTCACC+AGG | - | chr4.1:25770342-25770361 | MS.gene006744:CDS | 40.0% | |
| TATGTTTCCTTCACTGCCAA+TGG | - | chr4.1:25768313-25768332 | MS.gene006744:CDS | 40.0% | |
| TATTGCGGTTCATGTGGTTA+TGG | - | chr4.1:25770372-25770391 | MS.gene006744:CDS | 40.0% | |
| TCAAATGGGGAGTTGTAGAA+TGG | - | chr4.1:25771660-25771679 | MS.gene006744:intron | 40.0% | |
| TCACCAGGGAATCATTATTG+CGG | - | chr4.1:25770357-25770376 | MS.gene006744:CDS | 40.0% | |
| TGATTCCCTGGTGAATTTCT+TGG | + | chr4.1:25770351-25770370 | None:intergenic | 40.0% | |
| TGCTGAGATGTTAGCAAAGA+GGG | - | chr4.1:25769304-25769323 | MS.gene006744:intron | 40.0% | |
| TGTCCAAAAGGAGAGAAACA+AGG | - | chr4.1:25770396-25770415 | MS.gene006744:intron | 40.0% | |
| TGTGGTTATGGTTGTCCAAA+AGG | - | chr4.1:25770384-25770403 | MS.gene006744:intron | 40.0% | |
| TTGCTGAGATGTTAGCAAAG+AGG | - | chr4.1:25769303-25769322 | MS.gene006744:intron | 40.0% | |
| ! | CCTCCATTGATGATTTCTAG+CGG | - | chr4.1:25770639-25770658 | MS.gene006744:CDS | 40.0% |
| ! | CTTTGTAGCCAGCTTTTGAT+AGG | + | chr4.1:25769954-25769973 | None:intergenic | 40.0% |
| ! | GGATGATGATGAATCAAGCA+AGG | - | chr4.1:25768334-25768353 | MS.gene006744:CDS | 40.0% |
| ! | GTTATGAAGTGTGCTGTTCT+TGG | + | chr4.1:25771355-25771374 | None:intergenic | 40.0% |
| ! | TTGGGCACTTTCTTGATTTG+TGG | - | chr4.1:25769383-25769402 | MS.gene006744:CDS | 40.0% |
| ! | TTTTATGGCTTCTAGCAACG+AGG | - | chr4.1:25769360-25769379 | MS.gene006744:CDS | 40.0% |
| !! | ATTTTGGCAGGTTCAACAGT+AGG | - | chr4.1:25770096-25770115 | MS.gene006744:CDS | 40.0% |
| !! | CCGCATCACATTTGATTTTG+AGG | + | chr4.1:25769888-25769907 | None:intergenic | 40.0% |
| !! | GAAGGTGCTGTTGATGAAAA+TGG | - | chr4.1:25771697-25771716 | MS.gene006744:intron | 40.0% |
| !!! | GCCTCTTTGTTTTCTTCTCT+TGG | - | chr4.1:25769552-25769571 | MS.gene006744:CDS | 40.0% |
| !!! | TAAGTTTTTTGTGGTGGTCG+GGG | - | chr4.1:25768749-25768768 | MS.gene006744:CDS | 40.0% |
| !!! | TGTTTTCAGTCAAGGTACTG+AGG | - | chr4.1:25768597-25768616 | MS.gene006744:CDS | 40.0% |
| AACTTCTTTCGGATCGATCG+AGG | + | chr4.1:25768481-25768500 | None:intergenic | 45.0% | |
| AATCCAGCATGGAAAGCCAT+TGG | - | chr4.1:25769703-25769722 | MS.gene006744:CDS | 45.0% | |
| ACTTCTTTCGGATCGATCGA+GGG | + | chr4.1:25768480-25768499 | None:intergenic | 45.0% | |
| ATACATACCTCGTCAGGGAT+TGG | + | chr4.1:25768398-25768417 | None:intergenic | 45.0% | |
| ATCGCTCACAAGCATATGTG+AGG | - | chr4.1:25768289-25768308 | MS.gene006744:CDS | 45.0% | |
| CAAATATCCAATCCCTGACG+AGG | - | chr4.1:25768388-25768407 | MS.gene006744:CDS | 45.0% | |
| CCGCTAGAAATCATCAATGG+AGG | + | chr4.1:25770642-25770661 | None:intergenic | 45.0% | |
| CCTAACAGGTAAAGCGAATG+AGG | - | chr4.1:25771165-25771184 | MS.gene006744:intron | 45.0% | |
| CCTCATTCGCTTTACCTGTT+AGG | + | chr4.1:25771168-25771187 | None:intergenic | 45.0% | |
| CTATGGAAACTGTGTGTGAG+AGG | - | chr4.1:25770232-25770251 | MS.gene006744:CDS | 45.0% | |
| CTCGTCAGGGATTGGATATT+TGG | + | chr4.1:25768390-25768409 | None:intergenic | 45.0% | |
| CTGTTCCTTGCATTCCATTC+AGG | + | chr4.1:25768504-25768523 | None:intergenic | 45.0% | |
| GAAACTGTGTGTGAGAGGAT+TGG | - | chr4.1:25770237-25770256 | MS.gene006744:CDS | 45.0% | |
| GAACCGCAATAATGATTCCC+TGG | + | chr4.1:25770363-25770382 | None:intergenic | 45.0% | |
| GAAGTAGGAACACACAGAAG+TGG | - | chr4.1:25771511-25771530 | MS.gene006744:intron | 45.0% | |
| GAGTGTCATCCATTGTTGAG+GGG | - | chr4.1:25768215-25768234 | MS.gene006744:CDS | 45.0% | |
| GCACTATATCCATGGGAATC+AGG | - | chr4.1:25771298-25771317 | MS.gene006744:intron | 45.0% | |
| GCTTCTGTCCTATCAAAAGC+TGG | - | chr4.1:25769943-25769962 | MS.gene006744:CDS | 45.0% | |
| GGTAACAATGCTCCTTCCAT+TGG | + | chr4.1:25771607-25771626 | None:intergenic | 45.0% | |
| GTATCCCCATGTCATTAGCA+CGG | + | chr4.1:25770706-25770725 | None:intergenic | 45.0% | |
| GTGGTGGTTCAGCTGTTAAT+TGG | - | chr4.1:25770118-25770137 | MS.gene006744:CDS | 45.0% | |
| TAACAGGATGCAAAGCTGAG+AGG | - | chr4.1:25770469-25770488 | MS.gene006744:intron | 45.0% | |
| TAGCTCGCTATCAAGATCAG+TGG | + | chr4.1:25768677-25768696 | None:intergenic | 45.0% | |
| TAGTCTAGTCCTGATTCCCA+TGG | + | chr4.1:25771310-25771329 | None:intergenic | 45.0% | |
| TATCCAATGGCTTTCCATGC+TGG | + | chr4.1:25769709-25769728 | None:intergenic | 45.0% | |
| TATCCCCATGTCATTAGCAC+GGG | + | chr4.1:25770705-25770724 | None:intergenic | 45.0% | |
| TCATCATCCATTGGCAGTGA+AGG | + | chr4.1:25768323-25768342 | None:intergenic | 45.0% | |
| TCATCCCGTGCTAATGACAT+GGG | - | chr4.1:25770698-25770717 | MS.gene006744:CDS | 45.0% | |
| TCGATCCTGTGATTCCTAAC+AGG | - | chr4.1:25771151-25771170 | MS.gene006744:intron | 45.0% | |
| TGGAGTCTAGTGTGACATTG+AGG | + | chr4.1:25769855-25769874 | None:intergenic | 45.0% | |
| TTAGCACGGGATGAAGATGA+AGG | + | chr4.1:25770692-25770711 | None:intergenic | 45.0% | |
| TTCATCCCGTGCTAATGACA+TGG | - | chr4.1:25770697-25770716 | MS.gene006744:CDS | 45.0% | |
| ! | GGAGTGTCATCCATTGTTGA+GGG | - | chr4.1:25768214-25768233 | MS.gene006744:CDS | 45.0% |
| ! | GGTGTTGAAAGAATGGTCAG+AGG | - | chr4.1:25770167-25770186 | MS.gene006744:CDS | 45.0% |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | + | chr4.1:25768810-25768829 | None:intergenic | 45.0% |
| !! | ATGGAAGGAGCATTGTTACC+AGG | - | chr4.1:25771607-25771626 | MS.gene006744:intron | 45.0% |
| !! | GATGCGGTAATTGTTGGTTC+TGG | - | chr4.1:25769901-25769920 | MS.gene006744:CDS | 45.0% |
| !! | GTAATTGTTGGTTCTGGCTG+TGG | - | chr4.1:25769907-25769926 | MS.gene006744:CDS | 45.0% |
| !! | GTCCCTTGTTTCTCTCCTTT+TGG | + | chr4.1:25770402-25770421 | None:intergenic | 45.0% |
| !!! | GGGTCTCTTTTTGGTGTCAT+TGG | + | chr4.1:25769761-25769780 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTTTTTATAAACA+TGG | - | chr4.1:25770797-25770816 | MS.gene006744:intron | 5.0% |
| AACAGCTTCGATGTGCATGG+TGG | - | chr4.1:25768519-25768538 | MS.gene006744:CDS | 50.0% | |
| ACAGCTTCGATGTGCATGGT+GGG | - | chr4.1:25768520-25768539 | MS.gene006744:CDS | 50.0% | |
| ACAGGTAAAGCGAATGAGGG+AGG | - | chr4.1:25771169-25771188 | MS.gene006744:intron | 50.0% | |
| AGGAACAGCTTCGATGTGCA+TGG | - | chr4.1:25768516-25768535 | MS.gene006744:CDS | 50.0% | |
| AGTGTGCTTCCAACTGCTGT+TGG | - | chr4.1:25771760-25771779 | MS.gene006744:CDS | 50.0% | |
| ATGGCTTCTAGCAACGAGGT+TGG | - | chr4.1:25769364-25769383 | MS.gene006744:CDS | 50.0% | |
| CATCCCGTGCTAATGACATG+GGG | - | chr4.1:25770699-25770718 | MS.gene006744:CDS | 50.0% | |
| GGGTTAACACCAACAGCAGT+TGG | + | chr4.1:25771772-25771791 | None:intergenic | 50.0% | |
| GTAGGAACACACAGAAGTGG+TGG | - | chr4.1:25771514-25771533 | MS.gene006744:intron | 50.0% | |
| GTGAGAGTTGGGAAGCTGAA+GGG | - | chr4.1:25771719-25771738 | MS.gene006744:CDS | 50.0% | |
| TCTCTCACACCCCTCAACAA+TGG | + | chr4.1:25768227-25768246 | None:intergenic | 50.0% | |
| TGATTACGCGCTGTTACGAG+TGG | + | chr4.1:25770919-25770938 | None:intergenic | 50.0% | |
| TGGCTTCTAGCAACGAGGTT+GGG | - | chr4.1:25769365-25769384 | MS.gene006744:CDS | 50.0% | |
| TTGGCAGGTTCAACAGTAGG+TGG | - | chr4.1:25770099-25770118 | MS.gene006744:CDS | 50.0% | |
| !! | ATTGTTGGTTCTGGCTGTGG+AGG | - | chr4.1:25769910-25769929 | MS.gene006744:CDS | 50.0% |
| !! | GGGAGTGTCATCCATTGTTG+AGG | - | chr4.1:25768213-25768232 | MS.gene006744:CDS | 50.0% |
| ATGTCTCAGGTTCGAGGCAG+TGG | + | chr4.1:25770872-25770891 | None:intergenic | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr4.1:25768812-25768831 | MS.gene006744:CDS | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr4.1:25768815-25768834 | None:intergenic | 55.0% | |
| GCAGCAGGAGCAGTTGAAGT+AGG | - | chr4.1:25771496-25771515 | MS.gene006744:intron | 55.0% | |
| GCAGGTTCAACAGTAGGTGG+TGG | - | chr4.1:25770102-25770121 | MS.gene006744:CDS | 55.0% | |
| GGTGAGAGTTGGGAAGCTGA+AGG | - | chr4.1:25771718-25771737 | MS.gene006744:CDS | 55.0% | |
| TTCGGATCGATCGAGGGAGA+GGG | + | chr4.1:25768474-25768493 | None:intergenic | 55.0% | |
| TTTCGGATCGATCGAGGGAG+AGG | + | chr4.1:25768475-25768494 | None:intergenic | 55.0% | |
| ATCGATCGAGGGAGAGGGAG+AGG | + | chr4.1:25768469-25768488 | None:intergenic | 60.0% | |
| TCGATCGAGGGAGAGGGAGA+GGG | + | chr4.1:25768468-25768487 | None:intergenic | 60.0% | |
| !! | GTTGGTTCTGGCTGTGGAGG+AGG | - | chr4.1:25769913-25769932 | MS.gene006744:CDS | 60.0% |
| GAGGGAGAGGGAGAGGGAGA+GGG | + | chr4.1:25768456-25768475 | None:intergenic | 65.0% | |
| CGAGGGAGAGGGAGAGGGAG+AGG | + | chr4.1:25768463-25768482 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 25768206 | 25771870 | 25768206 | ID=MS.gene006744 |
| chr4.1 | mRNA | 25768206 | 25771870 | 25768206 | ID=MS.gene006744.t1;Parent=MS.gene006744 |
| chr4.1 | exon | 25771718 | 25771870 | 25771718 | ID=MS.gene006744.t1.exon1;Parent=MS.gene006744.t1 |
| chr4.1 | CDS | 25771718 | 25771870 | 25771718 | ID=cds.MS.gene006744.t1;Parent=MS.gene006744.t1 |
| chr4.1 | exon | 25770502 | 25770774 | 25770502 | ID=MS.gene006744.t1.exon2;Parent=MS.gene006744.t1 |
| chr4.1 | CDS | 25770502 | 25770774 | 25770502 | ID=cds.MS.gene006744.t1;Parent=MS.gene006744.t1 |
| chr4.1 | exon | 25769323 | 25770391 | 25769323 | ID=MS.gene006744.t1.exon3;Parent=MS.gene006744.t1 |
| chr4.1 | CDS | 25769323 | 25770391 | 25769323 | ID=cds.MS.gene006744.t1;Parent=MS.gene006744.t1 |
| chr4.1 | exon | 25768206 | 25768903 | 25768206 | ID=MS.gene006744.t1.exon4;Parent=MS.gene006744.t1 |
| chr4.1 | CDS | 25768206 | 25768903 | 25768206 | ID=cds.MS.gene006744.t1;Parent=MS.gene006744.t1 |
| Gene Sequence |
| Protein sequence |
