Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008590.t1 | KEH34385.1 | 80.3 | 801 | 29 | 2 | 1 | 672 | 120 | 920 | 0.00E+00 | 1158.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008590.t1 | Q1HDT2 | 40.7 | 702 | 381 | 7 | 3 | 669 | 130 | 831 | 8.7e-154 | 545.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008590.t1 | A0A072V8A9 | 80.3 | 801 | 29 | 2 | 1 | 672 | 120 | 920 | 0.0e+00 | 1158.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene008590 | MS.gene26746 | PPI |
MS.gene008590 | MS.gene006576 | PPI |
MS.gene008590 | MS.gene68584 | PPI |
MS.gene008590 | MS.gene031733 | PPI |
MS.gene008590 | MS.gene065903 | PPI |
MS.gene008590 | MS.gene030202 | PPI |
MS.gene030201 | MS.gene008590 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008590.t1 | MTR_3g465680 | 92.228 | 386 | 21 | 2 | 288 | 672 | 543 | 920 | 0.0 | 723 |
MS.gene008590.t1 | MTR_3g465680 | 91.104 | 326 | 29 | 0 | 1 | 326 | 120 | 445 | 0.0 | 607 |
MS.gene008590.t1 | MTR_8g093780 | 34.375 | 704 | 412 | 14 | 7 | 672 | 104 | 795 | 4.43e-126 | 394 |
MS.gene008590.t1 | MTR_3g096380 | 35.151 | 697 | 408 | 11 | 7 | 669 | 105 | 791 | 3.24e-125 | 391 |
MS.gene008590.t1 | MTR_3g071990 | 33.580 | 676 | 423 | 11 | 11 | 672 | 25 | 688 | 2.16e-120 | 376 |
MS.gene008590.t1 | MTR_3g071990 | 33.580 | 676 | 423 | 11 | 11 | 672 | 107 | 770 | 1.64e-119 | 376 |
MS.gene008590.t1 | MTR_5g074340 | 31.679 | 685 | 437 | 11 | 8 | 672 | 115 | 788 | 8.81e-117 | 369 |
MS.gene008590.t1 | MTR_5g074360 | 30.556 | 684 | 444 | 10 | 8 | 672 | 115 | 786 | 2.04e-115 | 365 |
MS.gene008590.t1 | MTR_5g074320 | 29.499 | 678 | 459 | 9 | 8 | 672 | 45 | 716 | 7.92e-114 | 359 |
MS.gene008590.t1 | MTR_2g011520 | 32.286 | 700 | 422 | 16 | 7 | 672 | 87 | 768 | 1.07e-112 | 358 |
MS.gene008590.t1 | MTR_5g074380 | 30.435 | 690 | 449 | 12 | 2 | 672 | 154 | 831 | 2.50e-111 | 355 |
MS.gene008590.t1 | MTR_3g031170 | 30.724 | 677 | 451 | 10 | 1 | 669 | 114 | 780 | 3.89e-110 | 351 |
MS.gene008590.t1 | MTR_6g053320 | 31.014 | 690 | 441 | 14 | 4 | 668 | 87 | 766 | 3.12e-106 | 340 |
MS.gene008590.t1 | MTR_3g498715 | 29.794 | 678 | 437 | 15 | 7 | 663 | 129 | 788 | 7.97e-99 | 321 |
MS.gene008590.t1 | MTR_5g088840 | 30.229 | 698 | 440 | 13 | 4 | 670 | 137 | 818 | 2.29e-96 | 315 |
MS.gene008590.t1 | MTR_5g088790 | 30.385 | 701 | 435 | 17 | 4 | 670 | 136 | 817 | 3.92e-94 | 309 |
MS.gene008590.t1 | MTR_6g015940 | 29.335 | 692 | 445 | 10 | 1 | 669 | 117 | 787 | 2.23e-93 | 306 |
MS.gene008590.t1 | MTR_7g053000 | 29.857 | 700 | 440 | 16 | 4 | 670 | 136 | 817 | 2.88e-93 | 306 |
MS.gene008590.t1 | MTR_5g088430 | 30.914 | 689 | 447 | 12 | 1 | 671 | 115 | 792 | 6.91e-93 | 305 |
MS.gene008590.t1 | MTR_7g052680 | 29.857 | 700 | 440 | 17 | 4 | 670 | 136 | 817 | 1.37e-92 | 305 |
MS.gene008590.t1 | MTR_7g052970 | 29.857 | 700 | 440 | 16 | 4 | 670 | 136 | 817 | 3.38e-92 | 304 |
MS.gene008590.t1 | MTR_5g088470 | 30.229 | 698 | 440 | 17 | 1 | 671 | 115 | 792 | 9.73e-90 | 297 |
MS.gene008590.t1 | MTR_5g009780 | 28.143 | 700 | 453 | 16 | 1 | 667 | 96 | 778 | 2.80e-88 | 293 |
MS.gene008590.t1 | MTR_3g031160 | 28.675 | 687 | 440 | 14 | 8 | 668 | 116 | 778 | 7.43e-87 | 289 |
MS.gene008590.t1 | MTR_5g088450 | 29.781 | 685 | 453 | 11 | 7 | 672 | 121 | 796 | 1.70e-86 | 288 |
MS.gene008590.t1 | MTR_3g083850 | 29.173 | 689 | 451 | 16 | 1 | 669 | 115 | 786 | 4.43e-86 | 287 |
MS.gene008590.t1 | MTR_8g085260 | 28.860 | 693 | 447 | 12 | 1 | 668 | 119 | 790 | 9.45e-85 | 283 |
MS.gene008590.t1 | MTR_5g009800 | 27.754 | 699 | 455 | 16 | 1 | 667 | 77 | 757 | 3.45e-82 | 276 |
MS.gene008590.t1 | MTR_5g009770 | 27.960 | 701 | 451 | 18 | 1 | 667 | 96 | 776 | 9.60e-82 | 275 |
MS.gene008590.t1 | MTR_4g078120 | 28.179 | 692 | 426 | 18 | 25 | 667 | 117 | 786 | 2.03e-80 | 272 |
MS.gene008590.t1 | MTR_3g071870 | 28.653 | 698 | 453 | 16 | 4 | 667 | 113 | 799 | 3.12e-79 | 269 |
MS.gene008590.t1 | MTR_1g043400 | 28.512 | 719 | 442 | 20 | 1 | 670 | 92 | 787 | 2.21e-78 | 266 |
MS.gene008590.t1 | MTR_2g040100 | 26.454 | 722 | 441 | 15 | 7 | 667 | 117 | 809 | 3.50e-77 | 264 |
MS.gene008590.t1 | MTR_1g045870 | 28.134 | 718 | 431 | 20 | 1 | 670 | 92 | 772 | 7.95e-77 | 262 |
MS.gene008590.t1 | MTR_3g071880 | 26.912 | 706 | 465 | 14 | 1 | 667 | 97 | 790 | 1.77e-75 | 259 |
MS.gene008590.t1 | MTR_3g037270 | 28.411 | 711 | 441 | 18 | 4 | 667 | 99 | 788 | 5.84e-74 | 254 |
MS.gene008590.t1 | MTR_5g067690 | 28.191 | 713 | 434 | 18 | 7 | 667 | 105 | 791 | 1.96e-73 | 253 |
MS.gene008590.t1 | MTR_3g037260 | 28.973 | 711 | 438 | 19 | 4 | 667 | 96 | 786 | 2.01e-73 | 253 |
MS.gene008590.t1 | MTR_5g009770 | 27.820 | 665 | 426 | 18 | 37 | 667 | 1 | 645 | 5.05e-73 | 249 |
MS.gene008590.t1 | MTR_4g123583 | 27.988 | 686 | 434 | 16 | 25 | 667 | 117 | 785 | 8.20e-72 | 248 |
MS.gene008590.t1 | MTR_0002s1180 | 26.442 | 711 | 455 | 14 | 4 | 667 | 96 | 785 | 2.41e-68 | 239 |
MS.gene008590.t1 | MTR_7g099820 | 27.222 | 720 | 456 | 23 | 1 | 670 | 85 | 786 | 4.05e-62 | 222 |
MS.gene008590.t1 | MTR_3g031030 | 25.426 | 704 | 470 | 12 | 8 | 672 | 82 | 769 | 1.44e-60 | 217 |
MS.gene008590.t1 | MTR_7g099800 | 27.184 | 721 | 438 | 21 | 21 | 668 | 109 | 815 | 5.23e-60 | 216 |
MS.gene008590.t1 | MTR_4g037755 | 25.816 | 705 | 470 | 18 | 8 | 672 | 82 | 773 | 7.43e-58 | 209 |
MS.gene008590.t1 | MTR_7g099820 | 26.635 | 627 | 404 | 18 | 1 | 585 | 85 | 697 | 1.62e-55 | 201 |
MS.gene008590.t1 | MTR_7g099750 | 25.793 | 725 | 436 | 26 | 21 | 668 | 109 | 808 | 5.52e-52 | 193 |
MS.gene008590.t1 | MTR_7g052895 | 27.945 | 433 | 280 | 9 | 4 | 415 | 136 | 557 | 1.47e-48 | 182 |
MS.gene008590.t1 | MTR_7g052895 | 31.771 | 192 | 117 | 4 | 490 | 670 | 537 | 725 | 6.00e-16 | 82.4 |
MS.gene008590.t1 | MTR_4g029520 | 22.805 | 706 | 477 | 17 | 12 | 668 | 92 | 778 | 1.57e-48 | 182 |
MS.gene008590.t1 | MTR_3g110700 | 23.197 | 707 | 473 | 17 | 12 | 668 | 89 | 775 | 9.32e-48 | 180 |
MS.gene008590.t1 | MTR_7g085870 | 25.359 | 627 | 411 | 16 | 77 | 668 | 191 | 795 | 6.07e-46 | 175 |
MS.gene008590.t1 | MTR_5g083560 | 33.660 | 306 | 183 | 6 | 376 | 668 | 1 | 299 | 3.06e-45 | 164 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene008590.t1 | AT5G37060 | 42.308 | 702 | 370 | 7 | 3 | 669 | 130 | 831 | 0.0 | 590 |
MS.gene008590.t1 | AT5G58460 | 42.571 | 700 | 369 | 7 | 3 | 669 | 130 | 829 | 0.0 | 590 |
MS.gene008590.t1 | AT2G13620 | 33.666 | 701 | 423 | 13 | 1 | 669 | 100 | 790 | 4.29e-134 | 414 |
MS.gene008590.t1 | AT1G06970 | 31.495 | 689 | 435 | 15 | 1 | 668 | 113 | 785 | 1.70e-104 | 337 |
MS.gene008590.t1 | AT3G44900 | 31.903 | 699 | 436 | 13 | 4 | 668 | 121 | 813 | 1.54e-102 | 331 |
MS.gene008590.t1 | AT5G22900 | 32.102 | 704 | 428 | 16 | 8 | 670 | 126 | 820 | 1.09e-100 | 327 |
MS.gene008590.t1 | AT2G30240 | 30.848 | 684 | 445 | 10 | 1 | 668 | 115 | 786 | 6.94e-98 | 319 |
MS.gene008590.t1 | AT2G31910 | 31.360 | 625 | 385 | 13 | 76 | 667 | 76 | 689 | 1.48e-92 | 303 |
MS.gene008590.t1 | AT2G31910 | 31.360 | 625 | 385 | 13 | 76 | 667 | 76 | 689 | 1.48e-92 | 303 |
MS.gene008590.t1 | AT2G31910 | 31.360 | 625 | 385 | 13 | 76 | 667 | 173 | 786 | 1.39e-91 | 302 |
MS.gene008590.t1 | AT1G08140 | 29.799 | 698 | 439 | 19 | 4 | 669 | 127 | 805 | 1.09e-86 | 289 |
MS.gene008590.t1 | AT1G05580 | 29.900 | 699 | 432 | 19 | 7 | 667 | 9 | 687 | 3.00e-86 | 286 |
MS.gene008590.t1 | AT1G05580 | 29.900 | 699 | 432 | 19 | 7 | 667 | 120 | 798 | 4.90e-85 | 286 |
MS.gene008590.t1 | AT1G08150 | 27.883 | 685 | 450 | 14 | 4 | 661 | 135 | 802 | 3.47e-82 | 277 |
MS.gene008590.t1 | AT3G44910 | 29.056 | 678 | 438 | 16 | 1 | 658 | 103 | 757 | 5.26e-82 | 275 |
MS.gene008590.t1 | AT2G28180 | 27.817 | 701 | 446 | 18 | 4 | 668 | 133 | 809 | 2.80e-80 | 272 |
MS.gene008590.t1 | AT3G17630 | 30.222 | 675 | 423 | 16 | 21 | 666 | 115 | 770 | 3.88e-79 | 268 |
MS.gene008590.t1 | AT3G17630 | 30.222 | 675 | 423 | 16 | 21 | 666 | 115 | 770 | 3.88e-79 | 268 |
MS.gene008590.t1 | AT4G23700 | 27.716 | 718 | 456 | 19 | 1 | 669 | 93 | 796 | 3.84e-78 | 266 |
MS.gene008590.t1 | AT4G23700 | 27.716 | 718 | 456 | 19 | 1 | 669 | 93 | 796 | 3.84e-78 | 266 |
MS.gene008590.t1 | AT5G01680 | 28.717 | 686 | 452 | 15 | 7 | 669 | 106 | 777 | 6.99e-78 | 265 |
MS.gene008590.t1 | AT1G08135 | 27.586 | 696 | 446 | 18 | 2 | 668 | 129 | 795 | 9.58e-76 | 259 |
MS.gene008590.t1 | AT5G01690 | 27.300 | 674 | 459 | 14 | 9 | 667 | 110 | 767 | 1.92e-75 | 258 |
MS.gene008590.t1 | AT3G53720 | 28.552 | 718 | 432 | 19 | 21 | 668 | 36 | 742 | 8.31e-74 | 253 |
MS.gene008590.t1 | AT5G41610 | 28.468 | 692 | 445 | 18 | 13 | 667 | 38 | 716 | 9.49e-74 | 253 |
MS.gene008590.t1 | AT3G44930 | 26.783 | 687 | 448 | 16 | 4 | 658 | 106 | 769 | 2.52e-73 | 252 |
MS.gene008590.t1 | AT5G41610 | 28.468 | 692 | 445 | 18 | 13 | 667 | 106 | 784 | 3.16e-73 | 252 |
MS.gene008590.t1 | AT5G41610 | 28.468 | 692 | 445 | 18 | 13 | 667 | 106 | 784 | 3.16e-73 | 252 |
MS.gene008590.t1 | AT3G53720 | 28.552 | 718 | 432 | 19 | 21 | 668 | 109 | 815 | 3.32e-73 | 253 |
MS.gene008590.t1 | AT2G28170 | 26.984 | 693 | 456 | 16 | 5 | 668 | 128 | 799 | 6.53e-72 | 249 |
MS.gene008590.t1 | AT3G44920 | 28.818 | 694 | 439 | 17 | 4 | 665 | 106 | 776 | 2.03e-71 | 247 |
MS.gene008590.t1 | AT5G22910 | 26.890 | 688 | 443 | 16 | 7 | 656 | 119 | 784 | 9.46e-65 | 229 |
MS.gene008590.t1 | AT1G64170 | 26.657 | 694 | 442 | 22 | 19 | 667 | 120 | 791 | 1.67e-57 | 209 |
MS.gene008590.t1 | AT3G52080 | 25.410 | 732 | 464 | 25 | 1 | 672 | 80 | 789 | 1.11e-41 | 162 |
MS.gene008590.t1 | AT1G16380 | 23.695 | 709 | 465 | 19 | 12 | 668 | 91 | 775 | 7.85e-39 | 154 |
MS.gene008590.t1 | AT1G79400 | 23.033 | 699 | 478 | 17 | 12 | 668 | 93 | 773 | 1.44e-38 | 153 |
Find 119 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATTGTTAATGGGTCTTTC+TGG | 0.170903 | 3.2:+56485945 | MS.gene008590:CDS |
CACTGATACATGCATCTTTC+CGG | 0.211838 | 3.2:-56485453 | None:intergenic |
ATTAACCCTGCTCTTCTTAC+AGG | 0.224082 | 3.2:+56487632 | MS.gene008590:CDS |
TGATCCACTTCTTGTCCTTC+TGG | 0.226689 | 3.2:-56485854 | None:intergenic |
TTGCATTGAGGGCTTCTAAT+TGG | 0.260210 | 3.2:+56486092 | MS.gene008590:CDS |
AATGAACAACCTAGGAATAA+TGG | 0.268906 | 3.2:+56485370 | None:intergenic |
TATCATGTTTGTGCATTTCA+TGG | 0.274245 | 3.2:+56486264 | MS.gene008590:CDS |
GTCCGACATCTGAGTTTATA+AGG | 0.277149 | 3.2:-56485643 | None:intergenic |
TTCATGTGATCAATGAATAA+AGG | 0.278650 | 3.2:-56486969 | None:intergenic |
TTTGGTATAGCAATTGTTAA+TGG | 0.281501 | 3.2:+56485935 | MS.gene008590:CDS |
CTAAGAGAAGAAACTGAAAT+TGG | 0.282437 | 3.2:-56486918 | None:intergenic |
ATGGAATTGTGACATGGTTT+TGG | 0.287421 | 3.2:+56487477 | MS.gene008590:CDS |
GTTTGTCTATGGTGTGAAAA+TGG | 0.295878 | 3.2:+56485409 | MS.gene008590:CDS |
ATGTTCTTTATGTTTGTCTA+TGG | 0.297707 | 3.2:+56485398 | MS.gene008590:CDS |
GTGCCAGTTCACAAATGTTT+TGG | 0.298067 | 3.2:-56487118 | None:intergenic |
TGTGTTGAATGTCCCTTCTT+TGG | 0.300646 | 3.2:-56486791 | None:intergenic |
CAACCAAGTAGCAAAGAATT+TGG | 0.310233 | 3.2:-56486161 | None:intergenic |
GCATTAATCGGCGATGCATT+TGG | 0.310560 | 3.2:+56485683 | MS.gene008590:CDS |
CTTCTTTGGTTCAACATGTA+TGG | 0.310635 | 3.2:-56486777 | None:intergenic |
CCTTGTTGGATCATATAATA+TGG | 0.313487 | 3.2:-56486754 | None:intergenic |
CCCACCATAATGAATGAAAA+TGG | 0.318482 | 3.2:-56486052 | None:intergenic |
GATTTGTGACATCAAGTATA+TGG | 0.327031 | 3.2:-56486881 | None:intergenic |
CATCCAAATTCTTTGCTACT+TGG | 0.327184 | 3.2:+56486158 | MS.gene008590:CDS |
TGGGTCTTTCTGGTTGGGTT+TGG | 0.338131 | 3.2:+56485955 | MS.gene008590:CDS |
AGCCTCATTATGAGCTTAAG+AGG | 0.352450 | 3.2:+56486229 | MS.gene008590:CDS |
GTGTTTGTCCATTGATATAT+CGG | 0.354770 | 3.2:-56487005 | None:intergenic |
GTTAATGGGTCTTTCTGGTT+GGG | 0.357955 | 3.2:+56485950 | MS.gene008590:CDS |
ACACCTGATGGACCTCGTTT+AGG | 0.368025 | 3.2:+56485980 | MS.gene008590:CDS |
GCATTATCGACCGCATTAAT+CGG | 0.369460 | 3.2:+56485671 | MS.gene008590:CDS |
ATCGGCGATGCATTTGGAAT+TGG | 0.374748 | 3.2:+56485689 | MS.gene008590:CDS |
TTATTAATCCACATCATTGT+TGG | 0.377706 | 3.2:-56485824 | None:intergenic |
TTGGTATAGCAATTGTTAAT+GGG | 0.380643 | 3.2:+56485936 | MS.gene008590:CDS |
CTTGGTTGGCTGCAATGTAT+TGG | 0.383482 | 3.2:+56486176 | MS.gene008590:CDS |
TTTAGCCACAATTTCATCAA+TGG | 0.384888 | 3.2:+56485553 | MS.gene008590:CDS |
AACGACAAATTTACAAGTGT+TGG | 0.389355 | 3.2:+56487211 | MS.gene008590:CDS |
AACACAAATACTAATGTTGT+TGG | 0.395477 | 3.2:-56485497 | None:intergenic |
ATGAACAACCTAGGAATAAT+GGG | 0.395956 | 3.2:+56485371 | MS.gene008590:CDS |
GCATTTATAACTGACATGTT+TGG | 0.405973 | 3.2:+56485917 | MS.gene008590:CDS |
GTTCCAAAACATTTGTGAAC+TGG | 0.408852 | 3.2:+56487115 | MS.gene008590:CDS |
TTCAACATGTATGGCCTTGT+TGG | 0.412788 | 3.2:-56486768 | None:intergenic |
TCATGTGATCAATGAATAAA+GGG | 0.414821 | 3.2:-56486968 | None:intergenic |
CAAATTCTTTGCTACTTGGT+TGG | 0.416227 | 3.2:+56486162 | MS.gene008590:CDS |
TGTTAATGGGTCTTTCTGGT+TGG | 0.418466 | 3.2:+56485949 | MS.gene008590:CDS |
GAAATTGGATTGTTTGAGGT+TGG | 0.424370 | 3.2:-56486903 | None:intergenic |
TTGTGCATTTCATGGACAAA+AGG | 0.427385 | 3.2:+56486272 | MS.gene008590:CDS |
CAATGAAGGGGATAATGTTT+CGG | 0.434634 | 3.2:+56487439 | MS.gene008590:CDS |
TTCTTACAGGGTTATCTGAA+TGG | 0.435105 | 3.2:+56487645 | MS.gene008590:CDS |
AAACTCATTCATAATAGTCT+TGG | 0.438404 | 3.2:-56486023 | None:intergenic |
TTTCTTTCTCACAACAATGA+AGG | 0.445822 | 3.2:+56487425 | MS.gene008590:CDS |
TTAGCCACAATTTCATCAAT+GGG | 0.449256 | 3.2:+56485554 | MS.gene008590:CDS |
CTTAGACTATTCGAGCTTGA+GGG | 0.452212 | 3.2:+56486936 | MS.gene008590:CDS |
GGCGATGCATTTGGAATTGG+TGG | 0.461544 | 3.2:+56485692 | MS.gene008590:CDS |
ATGAACCACAAAGAATTCTC+TGG | 0.470442 | 3.2:-56485755 | None:intergenic |
GATAACCCTGTAAGAAGAGC+AGG | 0.471284 | 3.2:-56487638 | None:intergenic |
GCTCCTAAACGAGGTCCATC+AGG | 0.477867 | 3.2:-56485983 | None:intergenic |
TTGGGTTTGGTTACACCTGA+TGG | 0.478296 | 3.2:+56485968 | MS.gene008590:CDS |
TTGAGAATACAAAATAGAAC+AGG | 0.481032 | 3.2:-56485611 | None:intergenic |
TTCTTTCTCACAACAATGAA+GGG | 0.482013 | 3.2:+56487426 | MS.gene008590:CDS |
TAAAACCAGAGAATTCTTTG+TGG | 0.487833 | 3.2:+56485750 | MS.gene008590:CDS |
ACATGAATCCCATTATTCCT+AGG | 0.489121 | 3.2:-56485379 | None:intergenic |
AACTGAAATTGGATTGTTTG+AGG | 0.490062 | 3.2:-56486907 | None:intergenic |
TCATATAATATGGAGATTAG+AGG | 0.490882 | 3.2:-56486744 | None:intergenic |
TGTGCATTTCATGGACAAAA+GGG | 0.490897 | 3.2:+56486273 | MS.gene008590:CDS |
TCGGAGAAGAAGCTTGATGA+TGG | 0.491582 | 3.2:+56487458 | MS.gene008590:CDS |
TGGAGTGAAAGTGATGAGTT+AGG | 0.491712 | 3.2:+56487665 | MS.gene008590:CDS |
GATGCATGTATCAGTGGGAT+TGG | 0.496448 | 3.2:+56485460 | MS.gene008590:CDS |
TGTATAGAGAAGTTGTGGTA+AGG | 0.499534 | 3.2:+56487528 | MS.gene008590:CDS |
TTGATAGTTGGAAGGAAACA+AGG | 0.501510 | 3.2:+56487608 | MS.gene008590:CDS |
CGGAAAGATGCATGTATCAG+TGG | 0.505267 | 3.2:+56485454 | MS.gene008590:CDS |
AGTGATGAGTTAGGAATCAT+TGG | 0.506367 | 3.2:+56487674 | MS.gene008590:CDS |
CATACATGTTGAACCAAAGA+AGG | 0.507802 | 3.2:+56486778 | MS.gene008590:CDS |
TGCAGCAATTCATGATATGA+AGG | 0.509176 | 3.2:+56487568 | MS.gene008590:CDS |
CTTCTTGAAAACATCGTGGT+TGG | 0.512637 | 3.2:+56487275 | MS.gene008590:CDS |
CTTGACGCCGAAAACACAAA+TGG | 0.515021 | 3.2:+56486852 | MS.gene008590:CDS |
TCTTAGACTATTCGAGCTTG+AGG | 0.515943 | 3.2:+56486935 | MS.gene008590:CDS |
CATTGATTGCTTGGGAGCCA+CGG | 0.519539 | 3.2:-56487093 | None:intergenic |
ACTATTCGAAGTTCTACCTC+TGG | 0.528270 | 3.2:-56486819 | None:intergenic |
CATGATTTCTGTTGTAGCTG+TGG | 0.532422 | 3.2:+56485775 | MS.gene008590:CDS |
TACTCCCATTGATGAAATTG+TGG | 0.533359 | 3.2:-56485558 | None:intergenic |
GCATTTGAAGCGGGAAGACA+AGG | 0.534525 | 3.2:+56485722 | MS.gene008590:CDS |
ATTCGAAGTTCTACCTCTGG+TGG | 0.535454 | 3.2:-56486816 | None:intergenic |
AAGTTCCTCCGATATATCAA+TGG | 0.543747 | 3.2:+56486997 | MS.gene008590:CDS |
AGTTGTGTATAGAGAAGTTG+TGG | 0.548450 | 3.2:+56487523 | MS.gene008590:CDS |
ATCTTGCCTTTCATGAAGAG+AGG | 0.549407 | 3.2:+56487164 | MS.gene008590:CDS |
GTCAAAATCAAGAGAAACAA+AGG | 0.549424 | 3.2:-56486127 | None:intergenic |
GTACAACAACAAATCCTAAG+AGG | 0.550204 | 3.2:+56487746 | MS.gene008590:CDS |
ATACAGATCATGAATGTGGC+GGG | 0.556386 | 3.2:+56486672 | MS.gene008590:intron |
AACACCAGAAGGACAAGAAG+TGG | 0.556461 | 3.2:+56485850 | MS.gene008590:CDS |
TTAACCCTGCTCTTCTTACA+GGG | 0.559036 | 3.2:+56487633 | MS.gene008590:CDS |
AATGTCAGTCCATCTCTGAA+TGG | 0.562571 | 3.2:-56486205 | None:intergenic |
AGAGAAGTTGTGGTAAGGAG+TGG | 0.564223 | 3.2:+56487533 | MS.gene008590:CDS |
GAAAAGCCTCTCTTCATGAA+AGG | 0.564912 | 3.2:-56487170 | None:intergenic |
GGAGTATTAGCAGCGTACAT+AGG | 0.580366 | 3.2:+56485575 | MS.gene008590:CDS |
TGGCGTATGCCATTCAGAGA+TGG | 0.589847 | 3.2:+56486196 | MS.gene008590:CDS |
CCATATTATATGATCCAACA+AGG | 0.605375 | 3.2:+56486754 | MS.gene008590:CDS |
AACCTTATAAACTCAGATGT+CGG | 0.605903 | 3.2:+56485641 | MS.gene008590:CDS |
TCTTTCTCACAACAATGAAG+GGG | 0.608409 | 3.2:+56487427 | MS.gene008590:CDS |
ACCATTGTTGCTCCTAAACG+AGG | 0.611383 | 3.2:-56485992 | None:intergenic |
AAATGCATCGCCGATTAATG+CGG | 0.611584 | 3.2:-56485681 | None:intergenic |
TACCACTAAAACAGAAGCTG+AGG | 0.612537 | 3.2:-56487726 | None:intergenic |
GTCCTCTTAAGCTCATAATG+AGG | 0.612723 | 3.2:-56486231 | None:intergenic |
TGATAGTTGGAAGGAAACAA+GGG | 0.619643 | 3.2:+56487609 | MS.gene008590:CDS |
CAATGAATAAAGGGCTAGCG+CGG | 0.621467 | 3.2:-56486959 | None:intergenic |
GGAAAGATGCATGTATCAGT+GGG | 0.626336 | 3.2:+56485455 | MS.gene008590:CDS |
TATACAGATCATGAATGTGG+CGG | 0.633477 | 3.2:+56486671 | MS.gene008590:intron |
ACTATGTTTAAGAAAATACA+TGG | 0.635113 | 3.2:+56485523 | MS.gene008590:CDS |
GAAAGAAGAAGTGTCACTTA+CGG | 0.636045 | 3.2:+56487394 | MS.gene008590:CDS |
GCTTATACAGATCATGAATG+TGG | 0.640314 | 3.2:+56486668 | MS.gene008590:intron |
CAATTCCTAATGAACAACCT+AGG | 0.644662 | 3.2:+56485362 | None:intergenic |
GCAATTCATGATATGAAGGA+TGG | 0.645349 | 3.2:+56487572 | MS.gene008590:CDS |
TTTGTCCATTGATATATCGG+AGG | 0.650407 | 3.2:-56487002 | None:intergenic |
GTATTAGGCCAACAATGATG+TGG | 0.651406 | 3.2:+56485816 | MS.gene008590:CDS |
ACCTCGTTTAGGAGCAACAA+TGG | 0.651573 | 3.2:+56485991 | MS.gene008590:CDS |
ATTCATGATATGAAGGATGG+TGG | 0.657254 | 3.2:+56487575 | MS.gene008590:CDS |
ATACATGTTGAACCAAAGAA+GGG | 0.666685 | 3.2:+56486779 | MS.gene008590:CDS |
ATAACCCTGTAAGAAGAGCA+GGG | 0.682032 | 3.2:-56487637 | None:intergenic |
TTGATGATGGAATTGTGACA+TGG | 0.692399 | 3.2:+56487471 | MS.gene008590:CDS |
AGGTCTTCTTGAAAACATCG+TGG | 0.706226 | 3.2:+56487271 | MS.gene008590:CDS |
CATTCAACACAATCCACCAG+AGG | 0.730109 | 3.2:+56486803 | MS.gene008590:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGATAATTATAATATGTAGA+AGG | - | chr3.2:56486588-56486607 | None:intergenic | 15.0% |
!! | ATTCTAAGTAAAAATTTGAT+TGG | - | chr3.2:56486309-56486328 | None:intergenic | 15.0% |
!!! | TACTTTTATTTTGTTGTATT+AGG | + | chr3.2:56485801-56485820 | MS.gene008590:CDS | 15.0% |
!! | ACTATGTTTAAGAAAATACA+TGG | + | chr3.2:56485523-56485542 | MS.gene008590:CDS | 20.0% |
!! | ATTAATAAAAAAACACCAGA+AGG | + | chr3.2:56485839-56485858 | MS.gene008590:CDS | 20.0% |
!!! | ATTGCAATTTTTGTTGATAA+AGG | + | chr3.2:56487251-56487270 | MS.gene008590:CDS | 20.0% |
!!! | ATTTTGATTTTTTTGCATTG+AGG | + | chr3.2:56486080-56486099 | MS.gene008590:CDS | 20.0% |
!!! | TTGTTGTTGCTATTATTTTA+GGG | + | chr3.2:56485882-56485901 | MS.gene008590:CDS | 20.0% |
!!! | TTTGTTGTTGCTATTATTTT+AGG | + | chr3.2:56485881-56485900 | MS.gene008590:CDS | 20.0% |
!!! | TTTTGATTTTTTTGCATTGA+GGG | + | chr3.2:56486081-56486100 | MS.gene008590:CDS | 20.0% |
! | AAACTCATTCATAATAGTCT+TGG | - | chr3.2:56486026-56486045 | None:intergenic | 25.0% |
! | AACACAAATACTAATGTTGT+TGG | - | chr3.2:56485500-56485519 | None:intergenic | 25.0% |
! | ATGTTCTTTATGTTTGTCTA+TGG | + | chr3.2:56485398-56485417 | MS.gene008590:CDS | 25.0% |
! | TCATATAATATGGAGATTAG+AGG | - | chr3.2:56486747-56486766 | None:intergenic | 25.0% |
! | TCATGTGATCAATGAATAAA+GGG | - | chr3.2:56486971-56486990 | None:intergenic | 25.0% |
! | TTATTAATCCACATCATTGT+TGG | - | chr3.2:56485827-56485846 | None:intergenic | 25.0% |
! | TTCATGTGATCAATGAATAA+AGG | - | chr3.2:56486972-56486991 | None:intergenic | 25.0% |
! | TTGAGAATACAAAATAGAAC+AGG | - | chr3.2:56485614-56485633 | None:intergenic | 25.0% |
! | TTGGTATAGCAATTGTTAAT+GGG | + | chr3.2:56485936-56485955 | MS.gene008590:CDS | 25.0% |
! | TTTGGTATAGCAATTGTTAA+TGG | + | chr3.2:56485935-56485954 | MS.gene008590:CDS | 25.0% |
!!! | TATGCCATTTTCATTCATTA+TGG | + | chr3.2:56486048-56486067 | MS.gene008590:CDS | 25.0% |
!!! | TGTTGTTGCTATTATTTTAG+GGG | + | chr3.2:56485883-56485902 | MS.gene008590:CDS | 25.0% |
AACCTTATAAACTCAGATGT+CGG | + | chr3.2:56485641-56485660 | MS.gene008590:CDS | 30.0% | |
AACGACAAATTTACAAGTGT+TGG | + | chr3.2:56487211-56487230 | MS.gene008590:CDS | 30.0% | |
AACTGAAATTGGATTGTTTG+AGG | - | chr3.2:56486910-56486929 | None:intergenic | 30.0% | |
AATGTTGTGTTTACGATGAT+TGG | + | chr3.2:56486516-56486535 | MS.gene008590:intron | 30.0% | |
ACAAAAATTGCAATTGAGCA+AGG | - | chr3.2:56487245-56487264 | None:intergenic | 30.0% | |
ATACATGTTGAACCAAAGAA+GGG | + | chr3.2:56486779-56486798 | MS.gene008590:CDS | 30.0% | |
ATGAACAACCTAGGAATAAT+GGG | + | chr3.2:56485371-56485390 | MS.gene008590:CDS | 30.0% | |
CCATATTATATGATCCAACA+AGG | + | chr3.2:56486754-56486773 | MS.gene008590:CDS | 30.0% | |
CCTTGTTGGATCATATAATA+TGG | - | chr3.2:56486757-56486776 | None:intergenic | 30.0% | |
CTAAGAGAAGAAACTGAAAT+TGG | - | chr3.2:56486921-56486940 | None:intergenic | 30.0% | |
GATTTGTGACATCAAGTATA+TGG | - | chr3.2:56486884-56486903 | None:intergenic | 30.0% | |
GCATTTATAACTGACATGTT+TGG | + | chr3.2:56485917-56485936 | MS.gene008590:CDS | 30.0% | |
GTCAAAATCAAGAGAAACAA+AGG | - | chr3.2:56486130-56486149 | None:intergenic | 30.0% | |
GTGTTTGTCCATTGATATAT+CGG | - | chr3.2:56487008-56487027 | None:intergenic | 30.0% | |
TAAAACCAGAGAATTCTTTG+TGG | + | chr3.2:56485750-56485769 | MS.gene008590:CDS | 30.0% | |
TATCATGTTTGTGCATTTCA+TGG | + | chr3.2:56486264-56486283 | MS.gene008590:CDS | 30.0% | |
TTAGCCACAATTTCATCAAT+GGG | + | chr3.2:56485554-56485573 | MS.gene008590:CDS | 30.0% | |
TTCTTTCTCACAACAATGAA+GGG | + | chr3.2:56487426-56487445 | MS.gene008590:CDS | 30.0% | |
TTTAGCCACAATTTCATCAA+TGG | + | chr3.2:56485553-56485572 | MS.gene008590:CDS | 30.0% | |
TTTCTTTCTCACAACAATGA+AGG | + | chr3.2:56487425-56487444 | MS.gene008590:CDS | 30.0% | |
! | CCATTTTCATTCATTATGGT+GGG | + | chr3.2:56486052-56486071 | MS.gene008590:CDS | 30.0% |
!! | ATGATCTTTTGATAGTTGGA+AGG | + | chr3.2:56487600-56487619 | MS.gene008590:CDS | 30.0% |
!! | GGTTATGATCTTTTGATAGT+TGG | + | chr3.2:56487596-56487615 | MS.gene008590:CDS | 30.0% |
!! | TATTTTAGGGGTTTTTGTGA+TGG | + | chr3.2:56485895-56485914 | MS.gene008590:CDS | 30.0% |
!! | TTGTTTCTCTTGATTTTGAC+TGG | + | chr3.2:56486130-56486149 | MS.gene008590:CDS | 30.0% |
!!! | AAAATCGCTGTGTTTTTTCT+TGG | + | chr3.2:56487323-56487342 | MS.gene008590:CDS | 30.0% |
!!! | TCTTTCCGGATTTTTTCAAT+AGG | - | chr3.2:56485442-56485461 | None:intergenic | 30.0% |
!!! | TTGTCGTTTTTCTAATTCCA+TGG | - | chr3.2:56487199-56487218 | None:intergenic | 30.0% |
!!! | TTTTGGAACATTGATTGCTT+GGG | - | chr3.2:56487104-56487123 | None:intergenic | 30.0% |
AACACAACATTCATAGACCT+AGG | - | chr3.2:56486507-56486526 | None:intergenic | 35.0% | |
AAGTACTAACCCAATCATTG+TGG | + | chr3.2:56486634-56486653 | MS.gene008590:intron | 35.0% | |
AAGTTCCTCCGATATATCAA+TGG | + | chr3.2:56486997-56487016 | MS.gene008590:CDS | 35.0% | |
ACATGAATCCCATTATTCCT+AGG | - | chr3.2:56485382-56485401 | None:intergenic | 35.0% | |
ACCTTCTACATAGAGTTCAA+AGG | + | chr3.2:56486457-56486476 | MS.gene008590:intron | 35.0% | |
AGTGATGAGTTAGGAATCAT+TGG | + | chr3.2:56487674-56487693 | MS.gene008590:CDS | 35.0% | |
AGTTGTGTATAGAGAAGTTG+TGG | + | chr3.2:56487523-56487542 | MS.gene008590:CDS | 35.0% | |
ATGAACCACAAAGAATTCTC+TGG | - | chr3.2:56485758-56485777 | None:intergenic | 35.0% | |
ATTCATGATATGAAGGATGG+TGG | + | chr3.2:56487575-56487594 | MS.gene008590:CDS | 35.0% | |
CAACCAAGTAGCAAAGAATT+TGG | - | chr3.2:56486164-56486183 | None:intergenic | 35.0% | |
CAATGAAGGGGATAATGTTT+CGG | + | chr3.2:56487439-56487458 | MS.gene008590:CDS | 35.0% | |
CATACATGTTGAACCAAAGA+AGG | + | chr3.2:56486778-56486797 | MS.gene008590:CDS | 35.0% | |
CATCCAAATTCTTTGCTACT+TGG | + | chr3.2:56486158-56486177 | MS.gene008590:CDS | 35.0% | |
CCAAGCCTATTGAAAAAATC+CGG | + | chr3.2:56485434-56485453 | MS.gene008590:CDS | 35.0% | |
CCCACCATAATGAATGAAAA+TGG | - | chr3.2:56486055-56486074 | None:intergenic | 35.0% | |
CCTTCTACATAGAGTTCAAA+GGG | + | chr3.2:56486458-56486477 | MS.gene008590:intron | 35.0% | |
GCAATTCATGATATGAAGGA+TGG | + | chr3.2:56487572-56487591 | MS.gene008590:CDS | 35.0% | |
GCTTATACAGATCATGAATG+TGG | + | chr3.2:56486668-56486687 | MS.gene008590:intron | 35.0% | |
GTACAACAACAAATCCTAAG+AGG | + | chr3.2:56487746-56487765 | MS.gene008590:CDS | 35.0% | |
GTTCCAAAACATTTGTGAAC+TGG | + | chr3.2:56487115-56487134 | MS.gene008590:CDS | 35.0% | |
GTTTGTCTATGGTGTGAAAA+TGG | + | chr3.2:56485409-56485428 | MS.gene008590:CDS | 35.0% | |
TACTCCCATTGATGAAATTG+TGG | - | chr3.2:56485561-56485580 | None:intergenic | 35.0% | |
TATACAGATCATGAATGTGG+CGG | + | chr3.2:56486671-56486690 | MS.gene008590:intron | 35.0% | |
TCTTTCTCACAACAATGAAG+GGG | + | chr3.2:56487427-56487446 | MS.gene008590:CDS | 35.0% | |
TGATAGTTGGAAGGAAACAA+GGG | + | chr3.2:56487609-56487628 | MS.gene008590:CDS | 35.0% | |
TGCAGCAATTCATGATATGA+AGG | + | chr3.2:56487568-56487587 | MS.gene008590:CDS | 35.0% | |
TGTATAGAGAAGTTGTGGTA+AGG | + | chr3.2:56487528-56487547 | MS.gene008590:CDS | 35.0% | |
TGTGCATTTCATGGACAAAA+GGG | + | chr3.2:56486273-56486292 | MS.gene008590:CDS | 35.0% | |
TTCTTACAGGGTTATCTGAA+TGG | + | chr3.2:56487645-56487664 | MS.gene008590:CDS | 35.0% | |
TTGTGCATTTCATGGACAAA+AGG | + | chr3.2:56486272-56486291 | MS.gene008590:CDS | 35.0% | |
TTTGTCCATTGATATATCGG+AGG | - | chr3.2:56487005-56487024 | None:intergenic | 35.0% | |
! | AAGCACTCTTTTATGCAGAT+AGG | + | chr3.2:56487363-56487382 | MS.gene008590:CDS | 35.0% |
! | ACTCTTTTATGCAGATAGGA+TGG | + | chr3.2:56487367-56487386 | MS.gene008590:CDS | 35.0% |
! | ATGGAATTGTGACATGGTTT+TGG | + | chr3.2:56487477-56487496 | MS.gene008590:CDS | 35.0% |
! | CAAATTCTTTGCTACTTGGT+TGG | + | chr3.2:56486162-56486181 | MS.gene008590:CDS | 35.0% |
! | CAATTGTTAATGGGTCTTTC+TGG | + | chr3.2:56485945-56485964 | MS.gene008590:CDS | 35.0% |
! | CTTCTTTGGTTCAACATGTA+TGG | - | chr3.2:56486780-56486799 | None:intergenic | 35.0% |
! | GAAATTGGATTGTTTGAGGT+TGG | - | chr3.2:56486906-56486925 | None:intergenic | 35.0% |
! | TGGAATTGTGACATGGTTTT+GGG | + | chr3.2:56487478-56487497 | MS.gene008590:CDS | 35.0% |
! | TTGATAGTTGGAAGGAAACA+AGG | + | chr3.2:56487608-56487627 | MS.gene008590:CDS | 35.0% |
! | TTTCGATTTTCTTGCATCAG+AGG | + | chr3.2:56486428-56486447 | MS.gene008590:intron | 35.0% |
!! | GAAAGAAGAAGTGTCACTTA+CGG | + | chr3.2:56487394-56487413 | MS.gene008590:CDS | 35.0% |
!! | GCCATTTTCATTCATTATGG+TGG | + | chr3.2:56486051-56486070 | MS.gene008590:CDS | 35.0% |
!! | TTGATGATGGAATTGTGACA+TGG | + | chr3.2:56487471-56487490 | MS.gene008590:CDS | 35.0% |
!!! | ATTGGTTTTGCCATCCAAAA+AGG | + | chr3.2:56486534-56486553 | MS.gene008590:intron | 35.0% |
!!! | GTTTTGGAACATTGATTGCT+TGG | - | chr3.2:56487105-56487124 | None:intergenic | 35.0% |
AATGTCAGTCCATCTCTGAA+TGG | - | chr3.2:56486208-56486227 | None:intergenic | 40.0% | |
ACTATTCGAAGTTCTACCTC+TGG | - | chr3.2:56486822-56486841 | None:intergenic | 40.0% | |
AGAACACGCTTTCTCATGTT+TGG | - | chr3.2:56486371-56486390 | None:intergenic | 40.0% | |
AGCCTCATTATGAGCTTAAG+AGG | + | chr3.2:56486229-56486248 | MS.gene008590:CDS | 40.0% | |
AGGTCTTCTTGAAAACATCG+TGG | + | chr3.2:56487271-56487290 | MS.gene008590:CDS | 40.0% | |
ATAACCCTGTAAGAAGAGCA+GGG | - | chr3.2:56487640-56487659 | None:intergenic | 40.0% | |
ATACAGATCATGAATGTGGC+GGG | + | chr3.2:56486672-56486691 | MS.gene008590:intron | 40.0% | |
ATAGCAATGTCATGTCTCCT+AGG | + | chr3.2:56486487-56486506 | MS.gene008590:intron | 40.0% | |
ATCTTGCCTTTCATGAAGAG+AGG | + | chr3.2:56487164-56487183 | MS.gene008590:CDS | 40.0% | |
ATTAACCCTGCTCTTCTTAC+AGG | + | chr3.2:56487632-56487651 | MS.gene008590:CDS | 40.0% | |
CACTGATACATGCATCTTTC+CGG | - | chr3.2:56485456-56485475 | None:intergenic | 40.0% | |
CATGATTTCTGTTGTAGCTG+TGG | + | chr3.2:56485775-56485794 | MS.gene008590:CDS | 40.0% | |
CCCTTTGAACTCTATGTAGA+AGG | - | chr3.2:56486461-56486480 | None:intergenic | 40.0% | |
CTTAGACTATTCGAGCTTGA+GGG | + | chr3.2:56486936-56486955 | MS.gene008590:CDS | 40.0% | |
CTTCTTGAAAACATCGTGGT+TGG | + | chr3.2:56487275-56487294 | MS.gene008590:CDS | 40.0% | |
GAAAAGCCTCTCTTCATGAA+AGG | - | chr3.2:56487173-56487192 | None:intergenic | 40.0% | |
GCACACAAACCACAATGATT+GGG | - | chr3.2:56486646-56486665 | None:intergenic | 40.0% | |
GCATTATCGACCGCATTAAT+CGG | + | chr3.2:56485671-56485690 | MS.gene008590:CDS | 40.0% | |
GGAAAGATGCATGTATCAGT+GGG | + | chr3.2:56485455-56485474 | MS.gene008590:CDS | 40.0% | |
GTATTAGGCCAACAATGATG+TGG | + | chr3.2:56485816-56485835 | MS.gene008590:CDS | 40.0% | |
GTCCGACATCTGAGTTTATA+AGG | - | chr3.2:56485646-56485665 | None:intergenic | 40.0% | |
GTCCTCTTAAGCTCATAATG+AGG | - | chr3.2:56486234-56486253 | None:intergenic | 40.0% | |
TACCACTAAAACAGAAGCTG+AGG | - | chr3.2:56487729-56487748 | None:intergenic | 40.0% | |
TCTTAGACTATTCGAGCTTG+AGG | + | chr3.2:56486935-56486954 | MS.gene008590:CDS | 40.0% | |
TGCACACAAACCACAATGAT+TGG | - | chr3.2:56486647-56486666 | None:intergenic | 40.0% | |
TGGAGTGAAAGTGATGAGTT+AGG | + | chr3.2:56487665-56487684 | MS.gene008590:CDS | 40.0% | |
TGTGTTGAATGTCCCTTCTT+TGG | - | chr3.2:56486794-56486813 | None:intergenic | 40.0% | |
TTAACCCTGCTCTTCTTACA+GGG | + | chr3.2:56487633-56487652 | MS.gene008590:CDS | 40.0% | |
TTGCATTGAGGGCTTCTAAT+TGG | + | chr3.2:56486092-56486111 | MS.gene008590:CDS | 40.0% | |
! | AAATGCATCGCCGATTAATG+CGG | - | chr3.2:56485684-56485703 | None:intergenic | 40.0% |
! | GACGAGTCCATTTGTGTTTT+CGG | - | chr3.2:56486862-56486881 | None:intergenic | 40.0% |
! | GATTCAATTTTTCACTGCCG+TGG | + | chr3.2:56487076-56487095 | MS.gene008590:CDS | 40.0% |
! | GTGCCAGTTCACAAATGTTT+TGG | - | chr3.2:56487121-56487140 | None:intergenic | 40.0% |
! | TGTTAATGGGTCTTTCTGGT+TGG | + | chr3.2:56485949-56485968 | MS.gene008590:CDS | 40.0% |
!! | AACCTCAGCTTCTGTTTTAG+TGG | + | chr3.2:56487724-56487743 | MS.gene008590:CDS | 40.0% |
!! | GTTAATGGGTCTTTCTGGTT+GGG | + | chr3.2:56485950-56485969 | MS.gene008590:CDS | 40.0% |
!! | TGGCGTTTTAGCATTTGAAG+CGG | + | chr3.2:56485712-56485731 | MS.gene008590:CDS | 40.0% |
!! | TTCAACATGTATGGCCTTGT+TGG | - | chr3.2:56486771-56486790 | None:intergenic | 40.0% |
!!! | ATCGCTGTGTTTTTTCTTGG+AGG | + | chr3.2:56487326-56487345 | MS.gene008590:CDS | 40.0% |
!!! | CCGGATTTTTTCAATAGGCT+TGG | - | chr3.2:56485437-56485456 | None:intergenic | 40.0% |
AACACCAGAAGGACAAGAAG+TGG | + | chr3.2:56485850-56485869 | MS.gene008590:CDS | 45.0% | |
ACCATTGTTGCTCCTAAACG+AGG | - | chr3.2:56485995-56486014 | None:intergenic | 45.0% | |
ACCTCGTTTAGGAGCAACAA+TGG | + | chr3.2:56485991-56486010 | MS.gene008590:CDS | 45.0% | |
AGAGAAGTTGTGGTAAGGAG+TGG | + | chr3.2:56487533-56487552 | MS.gene008590:CDS | 45.0% | |
ATTCGAAGTTCTACCTCTGG+TGG | - | chr3.2:56486819-56486838 | None:intergenic | 45.0% | |
CATTCAACACAATCCACCAG+AGG | + | chr3.2:56486803-56486822 | MS.gene008590:CDS | 45.0% | |
CGGAAAGATGCATGTATCAG+TGG | + | chr3.2:56485454-56485473 | MS.gene008590:CDS | 45.0% | |
CTTGACGCCGAAAACACAAA+TGG | + | chr3.2:56486852-56486871 | MS.gene008590:CDS | 45.0% | |
GATAACCCTGTAAGAAGAGC+AGG | - | chr3.2:56487641-56487660 | None:intergenic | 45.0% | |
GATGCATGTATCAGTGGGAT+TGG | + | chr3.2:56485460-56485479 | MS.gene008590:CDS | 45.0% | |
GCATTAATCGGCGATGCATT+TGG | + | chr3.2:56485683-56485702 | MS.gene008590:CDS | 45.0% | |
TCGGAGAAGAAGCTTGATGA+TGG | + | chr3.2:56487458-56487477 | MS.gene008590:CDS | 45.0% | |
TGATCCACTTCTTGTCCTTC+TGG | - | chr3.2:56485857-56485876 | None:intergenic | 45.0% | |
! | AAGAGAGGCTTTTCTGACCA+TGG | + | chr3.2:56487179-56487198 | MS.gene008590:CDS | 45.0% |
! | ATCGGCGATGCATTTGGAAT+TGG | + | chr3.2:56485689-56485708 | MS.gene008590:CDS | 45.0% |
! | CAATGAATAAAGGGCTAGCG+CGG | - | chr3.2:56486962-56486981 | None:intergenic | 45.0% |
! | CTTGGTTGGCTGCAATGTAT+TGG | + | chr3.2:56486176-56486195 | MS.gene008590:CDS | 45.0% |
! | GGAGTATTAGCAGCGTACAT+AGG | + | chr3.2:56485575-56485594 | MS.gene008590:CDS | 45.0% |
! | TTGGGTTTGGTTACACCTGA+TGG | + | chr3.2:56485968-56485987 | MS.gene008590:CDS | 45.0% |
!! | GGCGTTTTAGCATTTGAAGC+GGG | + | chr3.2:56485713-56485732 | MS.gene008590:CDS | 45.0% |
TGCCATCCAAAAAGGCCTAG+CGG | + | chr3.2:56486542-56486561 | MS.gene008590:intron | 50.0% | |
TGGCGTATGCCATTCAGAGA+TGG | + | chr3.2:56486196-56486215 | MS.gene008590:CDS | 50.0% | |
! | ACACCTGATGGACCTCGTTT+AGG | + | chr3.2:56485980-56485999 | MS.gene008590:CDS | 50.0% |
! | CATTGATTGCTTGGGAGCCA+CGG | - | chr3.2:56487096-56487115 | None:intergenic | 50.0% |
! | GCATTTGAAGCGGGAAGACA+AGG | + | chr3.2:56485722-56485741 | MS.gene008590:CDS | 50.0% |
! | GGCGATGCATTTGGAATTGG+TGG | + | chr3.2:56485692-56485711 | MS.gene008590:CDS | 50.0% |
!! | TGGGTCTTTCTGGTTGGGTT+TGG | + | chr3.2:56485955-56485974 | MS.gene008590:CDS | 50.0% |
GCTCCTAAACGAGGTCCATC+AGG | - | chr3.2:56485986-56486005 | None:intergenic | 55.0% | |
! | CGCCGCTAGGCCTTTTTGGA+TGG | - | chr3.2:56486547-56486566 | None:intergenic | 60.0% |
GAGCAACAAGCTGCGCCGCT+AGG | - | chr3.2:56486560-56486579 | None:intergenic | 65.0% | |
! | GCTGCGCCGCTAGGCCTTTT+TGG | - | chr3.2:56486551-56486570 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 56485371 | 56487772 | 56485371 | ID=MS.gene008590 |
chr3.2 | mRNA | 56485371 | 56487772 | 56485371 | ID=MS.gene008590.t1;Parent=MS.gene008590 |
chr3.2 | exon | 56485371 | 56486294 | 56485371 | ID=MS.gene008590.t1.exon1;Parent=MS.gene008590.t1 |
chr3.2 | CDS | 56485371 | 56486294 | 56485371 | ID=cds.MS.gene008590.t1;Parent=MS.gene008590.t1 |
chr3.2 | exon | 56486678 | 56487772 | 56486678 | ID=MS.gene008590.t1.exon2;Parent=MS.gene008590.t1 |
chr3.2 | CDS | 56486678 | 56487772 | 56486678 | ID=cds.MS.gene008590.t1;Parent=MS.gene008590.t1 |
Gene Sequence |
Protein sequence |