Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009124.t1 | XP_013445938.1 | 95.9 | 342 | 14 | 0 | 1 | 342 | 1 | 342 | 4.20E-188 | 667.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009124.t1 | Q9ZTR0 | 92.4 | 341 | 23 | 2 | 3 | 341 | 2 | 341 | 1.3e-182 | 640.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009124.t1 | A0A072U2G1 | 95.9 | 342 | 14 | 0 | 1 | 342 | 1 | 342 | 3.0e-188 | 667.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene009124 | MS.gene058418 | PPI |
| MS.gene42684 | MS.gene009124 | PPI |
| MS.gene009124 | MS.gene016160 | PPI |
| MS.gene009124 | MS.gene051552 | PPI |
| MS.gene009124 | MS.gene42624 | PPI |
| MS.gene009124 | MS.gene32768 | PPI |
| MS.gene009124 | MS.gene014976 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009124.t1 | MTR_8g063940 | 97.368 | 342 | 9 | 0 | 1 | 342 | 1 | 342 | 0.0 | 692 |
| MS.gene009124.t1 | MTR_5g034470 | 81.897 | 348 | 49 | 3 | 2 | 342 | 3 | 343 | 0.0 | 586 |
| MS.gene009124.t1 | MTR_5g034470 | 79.472 | 341 | 56 | 3 | 2 | 335 | 3 | 336 | 0.0 | 554 |
| MS.gene009124.t1 | MTR_3g091090 | 66.667 | 309 | 88 | 3 | 44 | 337 | 45 | 353 | 3.58e-146 | 417 |
| MS.gene009124.t1 | MTR_1g028360 | 64.706 | 306 | 95 | 3 | 44 | 337 | 53 | 357 | 2.24e-139 | 400 |
| MS.gene009124.t1 | MTR_3g078190 | 57.823 | 294 | 103 | 2 | 51 | 340 | 41 | 317 | 6.61e-129 | 372 |
| MS.gene009124.t1 | MTR_5g006140 | 35.965 | 228 | 137 | 7 | 71 | 293 | 42 | 265 | 5.72e-38 | 138 |
| MS.gene009124.t1 | MTR_5g006140 | 36.321 | 212 | 128 | 5 | 71 | 277 | 42 | 251 | 7.37e-38 | 136 |
| MS.gene009124.t1 | MTR_1g015300 | 31.136 | 273 | 158 | 9 | 45 | 295 | 11 | 275 | 1.13e-36 | 135 |
| MS.gene009124.t1 | MTR_3g104960 | 29.412 | 255 | 152 | 11 | 45 | 290 | 28 | 263 | 6.25e-28 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene009124.t1 | AT1G23820 | 78.916 | 332 | 68 | 2 | 11 | 342 | 5 | 334 | 0.0 | 543 |
| MS.gene009124.t1 | AT1G70310 | 76.385 | 343 | 77 | 2 | 1 | 342 | 1 | 340 | 0.0 | 540 |
| MS.gene009124.t1 | AT1G23820 | 78.545 | 275 | 58 | 1 | 4 | 278 | 42 | 315 | 1.01e-158 | 447 |
| MS.gene009124.t1 | AT5G53120 | 65.584 | 308 | 89 | 3 | 48 | 339 | 49 | 355 | 3.58e-144 | 412 |
| MS.gene009124.t1 | AT5G53120 | 65.584 | 308 | 89 | 3 | 48 | 339 | 49 | 355 | 3.58e-144 | 412 |
| MS.gene009124.t1 | AT5G53120 | 65.584 | 308 | 89 | 3 | 48 | 339 | 49 | 355 | 3.58e-144 | 412 |
| MS.gene009124.t1 | AT5G53120 | 65.584 | 308 | 89 | 3 | 48 | 339 | 49 | 355 | 3.58e-144 | 412 |
| MS.gene009124.t1 | AT5G53120 | 65.584 | 308 | 89 | 3 | 48 | 339 | 49 | 355 | 3.58e-144 | 412 |
| MS.gene009124.t1 | AT5G53120 | 65.584 | 308 | 89 | 3 | 48 | 339 | 66 | 372 | 1.10e-143 | 411 |
| MS.gene009124.t1 | AT5G53120 | 60.000 | 335 | 90 | 4 | 48 | 339 | 49 | 382 | 2.46e-139 | 400 |
| MS.gene009124.t1 | AT5G19530 | 32.171 | 258 | 163 | 7 | 68 | 320 | 40 | 290 | 3.65e-39 | 141 |
| MS.gene009124.t1 | AT5G19530 | 32.171 | 258 | 163 | 7 | 68 | 320 | 47 | 297 | 3.87e-39 | 142 |
Find 69 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGGAAGACCATGACTTTC+TGG | 0.202805 | 8.1:-39611297 | None:intergenic |
| TGAATCTTCTCAGTTATCTT+TGG | 0.244193 | 8.1:-39614333 | None:intergenic |
| ATATGGCAAGGTTCTTGTTT+TGG | 0.280455 | 8.1:+39611428 | MS.gene009124:CDS |
| CTCTATTTCTAACCCCAAAA+AGG | 0.307016 | 8.1:+39611521 | MS.gene009124:CDS |
| GGTGTTTCATCTGTGATTCC+TGG | 0.309804 | 8.1:+39608426 | MS.gene009124:CDS |
| CCAGAAAGTCATGGTCTTCC+AGG | 0.315838 | 8.1:+39611297 | MS.gene009124:CDS |
| GATGATGAAGAAGAGAATAA+TGG | 0.323969 | 8.1:+39608345 | MS.gene009124:CDS |
| TTGGTTATTGGTGGAGGTGA+TGG | 0.328542 | 8.1:+39611913 | MS.gene009124:CDS |
| ATGATGAAGAAGAGAATAAT+GGG | 0.335353 | 8.1:+39608346 | MS.gene009124:CDS |
| TTTGAAAATCTGACGACAAT+TGG | 0.351640 | 8.1:-39613047 | None:intergenic |
| ACTGCATCATAAGTTCCTTC+TGG | 0.359338 | 8.1:-39612774 | None:intergenic |
| GTAGATGAGTGATCATTTCT+TGG | 0.372101 | 8.1:-39611491 | None:intergenic |
| GATGAAACACCATTACCATT+TGG | 0.374994 | 8.1:-39608414 | None:intergenic |
| CATTTGTGAAATTGACAATA+TGG | 0.376368 | 8.1:+39611984 | MS.gene009124:CDS |
| AGAAGAGAATAATGGGGTTT+CGG | 0.378027 | 8.1:+39608353 | MS.gene009124:CDS |
| TTAAACCCTACTGCAACTTC+AGG | 0.398829 | 8.1:-39612415 | None:intergenic |
| GCACTCAGGCTGAAAGTATA+TGG | 0.405219 | 8.1:+39612993 | MS.gene009124:CDS |
| ATGAAACACCATTACCATTT+GGG | 0.414247 | 8.1:-39608413 | None:intergenic |
| AATGGCTGCTGCAGAGAGTA+TGG | 0.419913 | 8.1:+39608290 | None:intergenic |
| AACTTATGATGCAGTTATAG+TGG | 0.422946 | 8.1:+39612782 | MS.gene009124:CDS |
| GTTATTGGTGGAGGTGATGG+TGG | 0.427899 | 8.1:+39611916 | MS.gene009124:CDS |
| GTGGATTCATCTGACCCTAT+TGG | 0.434928 | 8.1:+39612801 | MS.gene009124:CDS |
| AAAACTAACCAGGCCACATT+GGG | 0.461244 | 8.1:-39608467 | None:intergenic |
| GTTTCAACAATGGATATTGA+AGG | 0.473115 | 8.1:+39608375 | MS.gene009124:CDS |
| ATACTCTCTGCAGCAGCCAT+TGG | 0.479249 | 8.1:-39608288 | None:intergenic |
| TGCAGAGAGTATGGTGGAAC+TGG | 0.481978 | 8.1:+39608299 | MS.gene009124:CDS |
| TGAAAGTATATGGCTTCATA+TGG | 0.483697 | 8.1:+39613003 | MS.gene009124:CDS |
| AAGGCTCTGTCAATTATGCT+TGG | 0.485127 | 8.1:+39613068 | MS.gene009124:CDS |
| TCGTTTGCGAAGAGGAAGAT+TGG | 0.488130 | 8.1:+39614308 | MS.gene009124:CDS |
| AAAACATACCTTGGATATGT+AGG | 0.492840 | 8.1:-39613100 | None:intergenic |
| GAAATTAGCCCAATGTGGCC+TGG | 0.495986 | 8.1:+39608459 | MS.gene009124:CDS |
| ACACATGTAGCATACCAATA+GGG | 0.502757 | 8.1:-39612815 | None:intergenic |
| GTGTTTCATCTGTGATTCCT+GGG | 0.503605 | 8.1:+39608427 | MS.gene009124:CDS |
| GTGGCAAGGGCTCTTCGTCC+AGG | 0.512123 | 8.1:+39612959 | MS.gene009124:CDS |
| TATTGAAGGTGGTGGTGATA+AGG | 0.522203 | 8.1:+39608389 | MS.gene009124:CDS |
| TGAGTGCACATAACTCCTCC+TGG | 0.525919 | 8.1:-39612977 | None:intergenic |
| CAAACATCCAGTGAATCCTA+TGG | 0.529311 | 8.1:+39614097 | MS.gene009124:CDS |
| TAAACCCTACTGCAACTTCA+GGG | 0.530870 | 8.1:-39612414 | None:intergenic |
| GCTTCATATGGATATAATTG+AGG | 0.531349 | 8.1:+39613015 | MS.gene009124:CDS |
| TGGGGTTTCGGTTTCAACAA+TGG | 0.533885 | 8.1:+39608365 | MS.gene009124:CDS |
| ATGAGTGATCATTTCTTGGT+AGG | 0.535102 | 8.1:-39611487 | None:intergenic |
| GTTTGCCGTCGTTTGCGAAG+AGG | 0.537586 | 8.1:+39614300 | MS.gene009124:CDS |
| ATATCCTTAAGGTCCTGCTC+AGG | 0.540360 | 8.1:+39612907 | MS.gene009124:intron |
| GAGTTATTCAGCTCACAGAA+AGG | 0.548553 | 8.1:+39611454 | MS.gene009124:CDS |
| GAAATCAACAAGAGGTCCCT+CGG | 0.562454 | 8.1:-39614075 | None:intergenic |
| AGTTATTCAGCTCACAGAAA+GGG | 0.568813 | 8.1:+39611455 | MS.gene009124:CDS |
| GCAGTCATCAACATATGGCA+AGG | 0.573215 | 8.1:+39611416 | MS.gene009124:intron |
| GGTGGTGATAAGGACCCAAA+TGG | 0.579962 | 8.1:+39608399 | MS.gene009124:CDS |
| GGGTTAGAAATAGAGCAAAG+AGG | 0.598026 | 8.1:-39611513 | None:intergenic |
| ATCTTCCTCTTCGCAAACGA+CGG | 0.599100 | 8.1:-39614305 | None:intergenic |
| GATAAGGACCCAAATGGTAA+TGG | 0.604632 | 8.1:+39608405 | MS.gene009124:CDS |
| TCAGAGTTGTAAAATTTGAG+TGG | 0.611670 | 8.1:-39614149 | None:intergenic |
| CCACGTGTGACTCTTCGCAT+TGG | 0.612172 | 8.1:+39612442 | MS.gene009124:CDS |
| TTTATGCTTTGCTCAACCGA+GGG | 0.613865 | 8.1:+39614059 | MS.gene009124:CDS |
| GTGACTCTTCGCATTGGTGA+TGG | 0.620618 | 8.1:+39612448 | MS.gene009124:CDS |
| AGGAGGAGTTATGTGCACTC+AGG | 0.621343 | 8.1:+39612979 | MS.gene009124:CDS |
| TCAACAATGGATATTGAAGG+TGG | 0.625049 | 8.1:+39608378 | MS.gene009124:CDS |
| CTACAGTTCCTACATATCCA+AGG | 0.636790 | 8.1:+39613092 | MS.gene009124:CDS |
| GTCAGATTACCAGAAAGTCA+TGG | 0.643976 | 8.1:+39611288 | MS.gene009124:CDS |
| AATGACGTGCTACTTCTCGC+AGG | 0.646893 | 8.1:-39611942 | None:intergenic |
| TGATGAAGAAGAGAATAATG+GGG | 0.651157 | 8.1:+39608347 | MS.gene009124:CDS |
| TTTCATCTGTGATTCCTGGG+TGG | 0.656590 | 8.1:+39608430 | MS.gene009124:CDS |
| GCAAGGGCTCTTCGTCCAGG+AGG | 0.657812 | 8.1:+39612962 | MS.gene009124:CDS |
| GGATGTTTGAAATCAACAAG+AGG | 0.663795 | 8.1:-39614083 | None:intergenic |
| TTTCTGAAATTAGCCCAATG+TGG | 0.666459 | 8.1:+39608454 | MS.gene009124:CDS |
| CTAATTTCAGAAAACCACCC+AGG | 0.684797 | 8.1:-39608444 | None:intergenic |
| ACAATGGATATTGAAGGTGG+TGG | 0.693735 | 8.1:+39608381 | MS.gene009124:CDS |
| GGCTGCTGCAGAGAGTATGG+TGG | 0.698354 | 8.1:+39608293 | MS.gene009124:CDS |
| CCAATGCGAAGAGTCACACG+TGG | 0.702718 | 8.1:-39612442 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | - | chr8.1:39610263-39610244 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr8.1:39610262-39610243 | None:intergenic | 0.0% |
| !! | AAATTAAACACAAATATTTA+AGG | - | chr8.1:39612499-39612518 | None:intergenic | 10.0% |
| !!! | TTGTAAAAAAAAAGTATATT+GGG | + | chr8.1:39611591-39611610 | MS.gene009124:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGGAT+TGG | - | chr8.1:39610877-39610896 | None:intergenic | 10.0% |
| !! | AAGTCGTTTATTATATTTAA+GGG | + | chr8.1:39610161-39610180 | MS.gene009124:intron | 15.0% |
| !! | ACATGTAATAAATAATACAT+AGG | - | chr8.1:39613568-39613587 | None:intergenic | 15.0% |
| !! | AGAAACTTAAAAAAACTTAA+AGG | + | chr8.1:39611027-39611046 | MS.gene009124:intron | 15.0% |
| !! | AGTTAACTAATTTGAATATT+TGG | - | chr8.1:39609851-39609870 | None:intergenic | 15.0% |
| !! | ATTCAAATTAGTTAACTATA+GGG | + | chr8.1:39609854-39609873 | MS.gene009124:intron | 15.0% |
| !! | CATTCATTAGATATAATAAA+CGG | + | chr8.1:39609524-39609543 | MS.gene009124:intron | 15.0% |
| !! | GGATACTATATATAAATTAA+TGG | - | chr8.1:39609451-39609470 | None:intergenic | 15.0% |
| !! | TAAGTCGTTTATTATATTTA+AGG | + | chr8.1:39610160-39610179 | MS.gene009124:intron | 15.0% |
| !! | TAATCAAGAATCAAAATTAA+AGG | - | chr8.1:39610412-39610431 | None:intergenic | 15.0% |
| !! | TACATCAAATCAAAAAAAAT+TGG | - | chr8.1:39612249-39612268 | None:intergenic | 15.0% |
| !! | TACCATTATTAAAAAAACAT+AGG | - | chr8.1:39613536-39613555 | None:intergenic | 15.0% |
| !! | TATTCAAATTAGTTAACTAT+AGG | + | chr8.1:39609853-39609872 | MS.gene009124:intron | 15.0% |
| !! | TTATTACATGTTAAGTTTAT+AGG | + | chr8.1:39613577-39613596 | MS.gene009124:intron | 15.0% |
| !! | TTGAAACTTAAAAAACTTAT+AGG | + | chr8.1:39611086-39611105 | MS.gene009124:intron | 15.0% |
| !!! | AAGTTTTTTAAGTTTCAAAT+AGG | - | chr8.1:39611084-39611103 | None:intergenic | 15.0% |
| !!! | AATAACATGATTTTAAATTG+TGG | + | chr8.1:39612063-39612082 | MS.gene009124:intron | 15.0% |
| !!! | AATTTTTTTTGATTTGATGT+AGG | + | chr8.1:39612248-39612267 | MS.gene009124:intron | 15.0% |
| !!! | AGGTATGTTTTATTTTTTTT+AGG | + | chr8.1:39613597-39613616 | MS.gene009124:intron | 15.0% |
| !!! | AGTTTTTTTAAGTTTCTAAT+AGG | - | chr8.1:39611024-39611043 | None:intergenic | 15.0% |
| !!! | ATATTTTTATATTGTGATTC+TGG | - | chr8.1:39612165-39612184 | None:intergenic | 15.0% |
| !!! | ATGTTTTTTTAATAATGGTA+AGG | + | chr8.1:39613536-39613555 | MS.gene009124:intron | 15.0% |
| !!! | CTTGTAAAAAAAAAGTATAT+TGG | + | chr8.1:39611590-39611609 | MS.gene009124:intron | 15.0% |
| !!! | TAATTTTTATCTTCATCTTT+TGG | + | chr8.1:39614224-39614243 | MS.gene009124:intron | 15.0% |
| !!! | TATCATTTTTTTGTTATAGT+GGG | + | chr8.1:39614027-39614046 | MS.gene009124:intron | 15.0% |
| !!! | TATTTTTTTTAGGAGTTTTT+AGG | + | chr8.1:39613607-39613626 | MS.gene009124:intron | 15.0% |
| !! | AAAAAAAGTTTAGATCACTT+AGG | - | chr8.1:39612862-39612881 | None:intergenic | 20.0% |
| !! | AAACAAAAGTCAAATATAGT+TGG | - | chr8.1:39609896-39609915 | None:intergenic | 20.0% |
| !! | AAAGACAAAAAACGATAAAA+AGG | - | chr8.1:39613903-39613922 | None:intergenic | 20.0% |
| !! | AAATGATAGAAATATTACGA+TGG | - | chr8.1:39614015-39614034 | None:intergenic | 20.0% |
| !! | AACAAAAGTCAAATATAGTT+GGG | - | chr8.1:39609895-39609914 | None:intergenic | 20.0% |
| !! | AATAAAAGAAAAAGTAGGAA+AGG | - | chr8.1:39609715-39609734 | None:intergenic | 20.0% |
| !! | AGATTGATGCAAATATATAT+AGG | - | chr8.1:39609816-39609835 | None:intergenic | 20.0% |
| !! | ATGTTAATTATACCACAAAA+TGG | + | chr8.1:39613631-39613650 | MS.gene009124:intron | 20.0% |
| !! | CCTGTAATAAATATATAGAA+AGG | + | chr8.1:39610450-39610469 | MS.gene009124:intron | 20.0% |
| !! | CCTTTCTATATATTTATTAC+AGG | - | chr8.1:39610453-39610472 | None:intergenic | 20.0% |
| !! | CGTTATATTTAATATCCTTA+AGG | + | chr8.1:39612896-39612915 | MS.gene009124:intron | 20.0% |
| !! | CTAACAAAAGAATATTTGAT+TGG | - | chr8.1:39610709-39610728 | None:intergenic | 20.0% |
| !! | CTTATTGTGTTTAAACTTAT+TGG | + | chr8.1:39608844-39608863 | MS.gene009124:intron | 20.0% |
| !! | GAAAACAAGATTATAATAGA+AGG | + | chr8.1:39609677-39609696 | MS.gene009124:intron | 20.0% |
| !! | GCATTAAATTAACAACTTAA+AGG | + | chr8.1:39610997-39611016 | MS.gene009124:intron | 20.0% |
| !! | TGATCAATAAAAGAAAAAGT+AGG | - | chr8.1:39609720-39609739 | None:intergenic | 20.0% |
| !! | TTAAGGAAACATATTAATGT+AGG | - | chr8.1:39612482-39612501 | None:intergenic | 20.0% |
| !! | TTCAAATTAGTTAACTATAG+GGG | + | chr8.1:39609855-39609874 | MS.gene009124:intron | 20.0% |
| !!! | AAAATCATGTTATTTAGCTT+AGG | - | chr8.1:39612057-39612076 | None:intergenic | 20.0% |
| !!! | AATTTGTTTAAAATCCACTA+CGG | + | chr8.1:39609273-39609292 | MS.gene009124:intron | 20.0% |
| !!! | ACCAAGTTTATTTTGATAAA+AGG | - | chr8.1:39611162-39611181 | None:intergenic | 20.0% |
| !!! | ACTATATTTGACTTTTGTTT+AGG | + | chr8.1:39609896-39609915 | MS.gene009124:intron | 20.0% |
| !!! | ATAGAAAAGATTTTGTTTCA+AGG | + | chr8.1:39611262-39611281 | MS.gene009124:CDS | 20.0% |
| !!! | ATATATTTGAGTTCATCTTA+TGG | + | chr8.1:39610848-39610867 | MS.gene009124:intron | 20.0% |
| !!! | ATCAAAATAAACTTGGTTTT+TGG | + | chr8.1:39611165-39611184 | MS.gene009124:intron | 20.0% |
| !!! | ATTTGGAGATTTAATTTTGT+TGG | + | chr8.1:39609766-39609785 | MS.gene009124:intron | 20.0% |
| !!! | CTATCATTTTTTTGTTATAG+TGG | + | chr8.1:39614026-39614045 | MS.gene009124:intron | 20.0% |
| !!! | CTCCTATGTTTTTTTAATAA+TGG | + | chr8.1:39613531-39613550 | MS.gene009124:intron | 20.0% |
| !!! | CTTGATTATTTTGCATAAAT+GGG | + | chr8.1:39610424-39610443 | MS.gene009124:intron | 20.0% |
| !!! | GAAGTTTTTAAGTTTCAAAA+AGG | - | chr8.1:39610969-39610988 | None:intergenic | 20.0% |
| !!! | GTATTTTTGTCAAACTTAAA+TGG | + | chr8.1:39611118-39611137 | MS.gene009124:intron | 20.0% |
| !!! | TAATTTTCTGTTTTAGGTTT+TGG | + | chr8.1:39611894-39611913 | MS.gene009124:intron | 20.0% |
| !!! | TATAGAATTTTAATGTGTAG+CGG | - | chr8.1:39613748-39613767 | None:intergenic | 20.0% |
| !!! | TCTTGATTATTTTGCATAAA+TGG | + | chr8.1:39610423-39610442 | MS.gene009124:intron | 20.0% |
| !!! | TTATTCTGTTCTTTTTTAGT+CGG | + | chr8.1:39612299-39612318 | MS.gene009124:intron | 20.0% |
| !!! | TTTAAGTTTGACAAAAATAC+CGG | - | chr8.1:39611118-39611137 | None:intergenic | 20.0% |
| !!! | TTTCAAAAAGGTACTTAAAA+GGG | - | chr8.1:39610957-39610976 | None:intergenic | 20.0% |
| ! | AAAAACTTATAGGATTAACC+CGG | + | chr8.1:39611096-39611115 | MS.gene009124:intron | 25.0% |
| ! | AAAACTCATGAATTAAACTC+TGG | + | chr8.1:39611205-39611224 | MS.gene009124:intron | 25.0% |
| ! | AAAGATTTCTCTTCTCAAAT+AGG | - | chr8.1:39613139-39613158 | None:intergenic | 25.0% |
| ! | AACTAACTAAACACACAAAA+AGG | - | chr8.1:39608543-39608562 | None:intergenic | 25.0% |
| ! | AATATAAGATTGTCCACAAT+AGG | + | chr8.1:39613218-39613237 | MS.gene009124:intron | 25.0% |
| ! | AATTTGTCCAACTTTCAAAT+AGG | - | chr8.1:39611054-39611073 | None:intergenic | 25.0% |
| ! | ACAAGATTATAATAGAAGGA+AGG | + | chr8.1:39609681-39609700 | MS.gene009124:intron | 25.0% |
| ! | AGAAAAGAAAAAAACTAACC+AGG | - | chr8.1:39608480-39608499 | None:intergenic | 25.0% |
| ! | ATAAATATGACTTCTCAATG+AGG | - | chr8.1:39612701-39612720 | None:intergenic | 25.0% |
| ! | ATGATGAAGAAGAGAATAAT+GGG | + | chr8.1:39608346-39608365 | MS.gene009124:CDS | 25.0% |
| ! | CAAACAGGAAAATAGAAAAA+GGG | - | chr8.1:39613495-39613514 | None:intergenic | 25.0% |
| ! | CATTTGTGAAATTGACAATA+TGG | + | chr8.1:39611984-39612003 | MS.gene009124:CDS | 25.0% |
| ! | GAACTCAAATATATTCATTG+CGG | - | chr8.1:39610842-39610861 | None:intergenic | 25.0% |
| ! | GTAAAAAATCTTTACACTGA+CGG | + | chr8.1:39612644-39612663 | MS.gene009124:intron | 25.0% |
| ! | TAGATTACAAAAACATACCT+TGG | - | chr8.1:39613112-39613131 | None:intergenic | 25.0% |
| ! | TATATGTGTCAGTTATTCAT+AGG | + | chr8.1:39608801-39608820 | MS.gene009124:intron | 25.0% |
| ! | TATCAATGATCTTAACTCTT+TGG | + | chr8.1:39610353-39610372 | MS.gene009124:intron | 25.0% |
| ! | TCAAACAGGAAAATAGAAAA+AGG | - | chr8.1:39613496-39613515 | None:intergenic | 25.0% |
| ! | TGTAGAAGAATTTGAACAAA+CGG | - | chr8.1:39609186-39609205 | None:intergenic | 25.0% |
| ! | TTAAGTTTGACAAAAATACC+GGG | - | chr8.1:39611117-39611136 | None:intergenic | 25.0% |
| ! | TTGATTCAATACATGTATGT+AGG | - | chr8.1:39609106-39609125 | None:intergenic | 25.0% |
| ! | TTGTATTAAATAGCGTATCT+TGG | + | chr8.1:39613793-39613812 | MS.gene009124:intron | 25.0% |
| ! | TTGTCAAATAGTATCTACAT+CGG | - | chr8.1:39609306-39609325 | None:intergenic | 25.0% |
| ! | TTTATAACCAACATGCAAAA+GGG | - | chr8.1:39608513-39608532 | None:intergenic | 25.0% |
| !! | AATTTCATATGACCATTTTG+TGG | - | chr8.1:39613646-39613665 | None:intergenic | 25.0% |
| !! | AGAGTATTAAGAGTTATCAT+CGG | - | chr8.1:39609472-39609491 | None:intergenic | 25.0% |
| !! | CAAAATCTTTTCTATCTTCA+AGG | - | chr8.1:39611257-39611276 | None:intergenic | 25.0% |
| !! | GCCTTTTATCAAAATAAACT+TGG | + | chr8.1:39611158-39611177 | MS.gene009124:intron | 25.0% |
| !! | TAGTCCTTTAAGTTTCAAAT+AGG | + | chr8.1:39610922-39610941 | MS.gene009124:intron | 25.0% |
| !! | TATTGACTAAATTATCTTGC+TGG | + | chr8.1:39612182-39612201 | MS.gene009124:intron | 25.0% |
| !! | TATTTGCATCAATCTTTTGA+AGG | + | chr8.1:39609821-39609840 | MS.gene009124:intron | 25.0% |
| !! | TCACTGTAATTTTCTGTTTT+AGG | + | chr8.1:39611888-39611907 | MS.gene009124:intron | 25.0% |
| !! | TTAAATGTTTTACCAATCCT+AGG | + | chr8.1:39610740-39610759 | MS.gene009124:intron | 25.0% |
| !! | TTCTTTTATTGATCAGCAAT+AGG | + | chr8.1:39609725-39609744 | MS.gene009124:intron | 25.0% |
| !! | TTTTATAACCAACATGCAAA+AGG | - | chr8.1:39608514-39608533 | None:intergenic | 25.0% |
| !!! | ATGGAAAACTTAACTTGTAT+TGG | + | chr8.1:39608886-39608905 | MS.gene009124:intron | 25.0% |
| !!! | GTTTCAAAAAGGTACTTAAA+AGG | - | chr8.1:39610958-39610977 | None:intergenic | 25.0% |
| !!! | TATTGGTTTGTGTTTTTGTA+AGG | + | chr8.1:39608861-39608880 | MS.gene009124:intron | 25.0% |
| !!! | TTAACTTGTATTGGTTAATG+TGG | + | chr8.1:39608895-39608914 | MS.gene009124:intron | 25.0% |
| !!! | TTGACTTTTGTTTAGGAATT+AGG | + | chr8.1:39609903-39609922 | MS.gene009124:intron | 25.0% |
| !!! | TTTGTGTTTTTGTAAGGTTA+TGG | + | chr8.1:39608867-39608886 | MS.gene009124:intron | 25.0% |
| AAAAAGTAGTCTCTATTGCT+CGG | + | chr8.1:39612325-39612344 | MS.gene009124:intron | 30.0% | |
| AAAACATACCTTGGATATGT+AGG | - | chr8.1:39613103-39613122 | None:intergenic | 30.0% | |
| AAAGAAAAAGTAGGAAAGGT+TGG | - | chr8.1:39609711-39609730 | None:intergenic | 30.0% | |
| AACACTTTCAACGTTTACAT+AGG | + | chr8.1:39610487-39610506 | MS.gene009124:intron | 30.0% | |
| AACGAAGGAAATACAAAAGA+TGG | - | chr8.1:39614190-39614209 | None:intergenic | 30.0% | |
| AACTTATGATGCAGTTATAG+TGG | + | chr8.1:39612782-39612801 | MS.gene009124:CDS | 30.0% | |
| AACTTCAGGGAAAAATTGTT+TGG | - | chr8.1:39612404-39612423 | None:intergenic | 30.0% | |
| AATTCAAAGCAATCTTTGCA+AGG | - | chr8.1:39610554-39610573 | None:intergenic | 30.0% | |
| ACATGTTCAAGTCATAGAAT+CGG | + | chr8.1:39613171-39613190 | MS.gene009124:intron | 30.0% | |
| AGACAAAAGTGGAAACAATT+TGG | - | chr8.1:39609597-39609616 | None:intergenic | 30.0% | |
| AGAGAGGTTCAATGATAAAA+GGG | - | chr8.1:39610578-39610597 | None:intergenic | 30.0% | |
| AGGTACTTAAAAGGGTAATA+AGG | - | chr8.1:39610949-39610968 | None:intergenic | 30.0% | |
| ATATAGACATAAGTCCAGTT+TGG | - | chr8.1:39611798-39611817 | None:intergenic | 30.0% | |
| ATGAAACACCATTACCATTT+GGG | - | chr8.1:39608416-39608435 | None:intergenic | 30.0% | |
| ATTTACAGTGTTGTAATTCG+TGG | + | chr8.1:39609146-39609165 | MS.gene009124:intron | 30.0% | |
| CACTAACTGTGTTTATATTG+CGG | - | chr8.1:39613287-39613306 | None:intergenic | 30.0% | |
| CATAAAATTGAACACAGATG+AGG | - | chr8.1:39612119-39612138 | None:intergenic | 30.0% | |
| CTTTATATTGAAGACATGTC+TGG | + | chr8.1:39608758-39608777 | MS.gene009124:intron | 30.0% | |
| GATGATGAAGAAGAGAATAA+TGG | + | chr8.1:39608345-39608364 | MS.gene009124:CDS | 30.0% | |
| GCTTCATATGGATATAATTG+AGG | + | chr8.1:39613015-39613034 | MS.gene009124:CDS | 30.0% | |
| GTGTTATCAATGGTAAATAG+CGG | + | chr8.1:39613240-39613259 | MS.gene009124:intron | 30.0% | |
| GTTGTTTAATGTGTTTGTGT+TGG | + | chr8.1:39608673-39608692 | MS.gene009124:intron | 30.0% | |
| GTTTCAACAATGGATATTGA+AGG | + | chr8.1:39608375-39608394 | MS.gene009124:CDS | 30.0% | |
| TAAAGGACCTATTTGAAAGT+TGG | + | chr8.1:39611044-39611063 | MS.gene009124:intron | 30.0% | |
| TAATTTACACCATGGAAGAA+AGG | - | chr8.1:39609645-39609664 | None:intergenic | 30.0% | |
| TAGAGAGGTTCAATGATAAA+AGG | - | chr8.1:39610579-39610598 | None:intergenic | 30.0% | |
| TATGGTTGTTGAAGTAAGTA+TGG | + | chr8.1:39612002-39612021 | MS.gene009124:intron | 30.0% | |
| TATTCATAGGTTTAGTTGCT+GGG | + | chr8.1:39608814-39608833 | MS.gene009124:intron | 30.0% | |
| TCAGAGTTGTAAAATTTGAG+TGG | - | chr8.1:39614152-39614171 | None:intergenic | 30.0% | |
| TGATGAAGAAGAGAATAATG+GGG | + | chr8.1:39608347-39608366 | MS.gene009124:CDS | 30.0% | |
| TGGAAAATTTGACAGAAACA+AGG | - | chr8.1:39608991-39609010 | None:intergenic | 30.0% | |
| TGTCAAATAGACACCATTTA+TGG | - | chr8.1:39613387-39613406 | None:intergenic | 30.0% | |
| TTAAATTGTGGTCACAACTA+TGG | + | chr8.1:39612075-39612094 | MS.gene009124:intron | 30.0% | |
| TTATTCATAGGTTTAGTTGC+TGG | + | chr8.1:39608813-39608832 | MS.gene009124:intron | 30.0% | |
| TTCACAACTTGGAATTGATT+TGG | + | chr8.1:39609749-39609768 | MS.gene009124:intron | 30.0% | |
| TTCTTTGACATATGAACATG+TGG | + | chr8.1:39609402-39609421 | MS.gene009124:intron | 30.0% | |
| TTTGAAAATCTGACGACAAT+TGG | - | chr8.1:39613050-39613069 | None:intergenic | 30.0% | |
| TTTGTTTAGGAATTAGGACT+AGG | + | chr8.1:39609909-39609928 | MS.gene009124:intron | 30.0% | |
| ! | AAAAGGCAAAATGTCTCTTT+TGG | - | chr8.1:39611145-39611164 | None:intergenic | 30.0% |
| ! | AACATACCCTTTTCCAAAAT+GGG | + | chr8.1:39613418-39613437 | MS.gene009124:intron | 30.0% |
| ! | AATTGTCGTCAGATTTTCAA+AGG | + | chr8.1:39613049-39613068 | MS.gene009124:CDS | 30.0% |
| ! | ACTCAAATTTTACAACTCTG+AGG | + | chr8.1:39614151-39614170 | MS.gene009124:CDS | 30.0% |
| ! | AGCAGTATAAATGACCTTTT+TGG | - | chr8.1:39611538-39611557 | None:intergenic | 30.0% |
| ! | AGGACCTATTTGAAACTTAA+AGG | - | chr8.1:39610929-39610948 | None:intergenic | 30.0% |
| ! | ATCATCTTTTTGTCTCTTCA+TGG | - | chr8.1:39608331-39608350 | None:intergenic | 30.0% |
| ! | ATTGAGTTGTTTATCCAAAC+TGG | + | chr8.1:39611781-39611800 | MS.gene009124:intron | 30.0% |
| ! | CAGTATAAATGACCTTTTTG+GGG | - | chr8.1:39611536-39611555 | None:intergenic | 30.0% |
| ! | CTAAGCTTTAATTTACACCA+TGG | - | chr8.1:39609653-39609672 | None:intergenic | 30.0% |
| ! | GAAATACGGATTTGAAACAA+GGG | + | chr8.1:39609965-39609984 | MS.gene009124:intron | 30.0% |
| ! | GATGTAGGATTTTCTACTTA+GGG | + | chr8.1:39612263-39612282 | MS.gene009124:intron | 30.0% |
| ! | GATTTTCTACTTAGGGAAAT+TGG | + | chr8.1:39612270-39612289 | MS.gene009124:intron | 30.0% |
| ! | GCAGTATAAATGACCTTTTT+GGG | - | chr8.1:39611537-39611556 | None:intergenic | 30.0% |
| ! | GTGTTTATATTGCGGATTTT+TGG | - | chr8.1:39613279-39613298 | None:intergenic | 30.0% |
| ! | TAACATACCCTTTTCCAAAA+TGG | + | chr8.1:39613417-39613436 | MS.gene009124:intron | 30.0% |
| ! | TGAAAGTATATGGCTTCATA+TGG | + | chr8.1:39613003-39613022 | MS.gene009124:CDS | 30.0% |
| ! | TGAAATACGGATTTGAAACA+AGG | + | chr8.1:39609964-39609983 | MS.gene009124:intron | 30.0% |
| ! | TGAATCAAGCTTTTCGTTAA+TGG | + | chr8.1:39609118-39609137 | MS.gene009124:intron | 30.0% |
| ! | TGATGTAGGATTTTCTACTT+AGG | + | chr8.1:39612262-39612281 | MS.gene009124:intron | 30.0% |
| ! | TTTGGATTTGGTTATCTGTT+TGG | + | chr8.1:39608940-39608959 | MS.gene009124:intron | 30.0% |
| ! | TTTTTGTCTTTACTTCCTCT+AGG | + | chr8.1:39613912-39613931 | MS.gene009124:intron | 30.0% |
| !! | GATTATTTTGCATAAATGGG+CGG | + | chr8.1:39610427-39610446 | MS.gene009124:intron | 30.0% |
| !! | TTTTGTTATAGTGGGATGAT+TGG | + | chr8.1:39614035-39614054 | MS.gene009124:intron | 30.0% |
| !!! | CTCTGGATGTATTTTTTACT+GGG | + | chr8.1:39610608-39610627 | MS.gene009124:intron | 30.0% |
| !!! | CTGTTTTAGGTTTTGGTTAT+TGG | + | chr8.1:39611901-39611920 | MS.gene009124:intron | 30.0% |
| !!! | TTTTAGGTTTTGGTTATTGG+TGG | + | chr8.1:39611904-39611923 | MS.gene009124:intron | 30.0% |
| AAACCCATACAATGTTGAGA+CGG | + | chr8.1:39609941-39609960 | MS.gene009124:intron | 35.0% | |
| AACGATAAAAAGGCAACAAG+AGG | - | chr8.1:39613893-39613912 | None:intergenic | 35.0% | |
| AATAGACACCATTTATGGCA+TGG | - | chr8.1:39613382-39613401 | None:intergenic | 35.0% | |
| AATGTTGAGACGGTGAAATA+CGG | + | chr8.1:39609951-39609970 | MS.gene009124:intron | 35.0% | |
| ACACATGTAGCATACCAATA+GGG | - | chr8.1:39612818-39612837 | None:intergenic | 35.0% | |
| ACTAGTAAACTAGACCGATT+GGG | - | chr8.1:39610767-39610786 | None:intergenic | 35.0% | |
| AGAATCAGAGTGAAAAAAGG+TGG | - | chr8.1:39609011-39609030 | None:intergenic | 35.0% | |
| AGCAAAATTCCTATGCAAAC+CGG | + | chr8.1:39613678-39613697 | MS.gene009124:intron | 35.0% | |
| AGGCTGTTTGAGAAAACATA+TGG | + | chr8.1:39611664-39611683 | MS.gene009124:intron | 35.0% | |
| AGTTATTCAGCTCACAGAAA+GGG | + | chr8.1:39611455-39611474 | MS.gene009124:CDS | 35.0% | |
| ATATATGCCTGTGTGATTAG+TGG | + | chr8.1:39609358-39609377 | MS.gene009124:intron | 35.0% | |
| ATGAGTGATCATTTCTTGGT+AGG | - | chr8.1:39611490-39611509 | None:intergenic | 35.0% | |
| CAAAAGTGGAAACAATTTGG+TGG | - | chr8.1:39609594-39609613 | None:intergenic | 35.0% | |
| CATATGAACATGTGGTAGTT+TGG | + | chr8.1:39609410-39609429 | MS.gene009124:intron | 35.0% | |
| CATTTGCAAACATTTGCAAG+AGG | - | chr8.1:39613197-39613216 | None:intergenic | 35.0% | |
| GAATTTGACATTGAGTGAAG+AGG | + | chr8.1:39608917-39608936 | MS.gene009124:intron | 35.0% | |
| GAGAGGTTCAATGATAAAAG+GGG | - | chr8.1:39610577-39610596 | None:intergenic | 35.0% | |
| GATGAAACACCATTACCATT+TGG | - | chr8.1:39608417-39608436 | None:intergenic | 35.0% | |
| GGAAATACAAAAGATGGTTG+AGG | - | chr8.1:39614184-39614203 | None:intergenic | 35.0% | |
| GTAGATGAGTGATCATTTCT+TGG | - | chr8.1:39611494-39611513 | None:intergenic | 35.0% | |
| GTTTATTTGCAGTCACTGAA+AGG | + | chr8.1:39610514-39610533 | MS.gene009124:intron | 35.0% | |
| GTTTGTTTGAGCTTATTTGC+TGG | + | chr8.1:39611627-39611646 | MS.gene009124:intron | 35.0% | |
| TAATCACACAGGCATATATC+AGG | - | chr8.1:39609357-39609376 | None:intergenic | 35.0% | |
| TACACATGTAGCATACCAAT+AGG | - | chr8.1:39612819-39612838 | None:intergenic | 35.0% | |
| TACATCACAGTGTTTAGATC+TGG | + | chr8.1:39609992-39610011 | MS.gene009124:intron | 35.0% | |
| TACATGCCAAGCAAATATCA+GGG | - | chr8.1:39609083-39609102 | None:intergenic | 35.0% | |
| TACTAGTAAACTAGACCGAT+TGG | - | chr8.1:39610768-39610787 | None:intergenic | 35.0% | |
| TACTGTCTATGGCAGAAAAA+TGG | + | chr8.1:39613310-39613329 | MS.gene009124:intron | 35.0% | |
| TAGAAGCGATTCAAACGAAT+GGG | - | chr8.1:39609622-39609641 | None:intergenic | 35.0% | |
| TCAACAATGGATATTGAAGG+TGG | + | chr8.1:39608378-39608397 | MS.gene009124:CDS | 35.0% | |
| TGAAACTTAAAGGACTAACC+CGG | - | chr8.1:39610919-39610938 | None:intergenic | 35.0% | |
| TGCAGAATCAGAGTGAAAAA+AGG | - | chr8.1:39609014-39609033 | None:intergenic | 35.0% | |
| TTCACTCTGATTCTGCAAAT+TGG | + | chr8.1:39609017-39609036 | MS.gene009124:intron | 35.0% | |
| TTGCCAAATAACAGCAATTG+TGG | - | chr8.1:39609217-39609236 | None:intergenic | 35.0% | |
| TTGTCAATTGCGAATCACAA+GGG | + | chr8.1:39613703-39613722 | MS.gene009124:intron | 35.0% | |
| ! | ACCATTGATAACACCTATTG+TGG | - | chr8.1:39613234-39613253 | None:intergenic | 35.0% |
| ! | ACGTCTTCAATAAGAAGTGT+CGG | - | chr8.1:39608582-39608601 | None:intergenic | 35.0% |
| ! | AGAAGAGAATAATGGGGTTT+CGG | + | chr8.1:39608353-39608372 | MS.gene009124:CDS | 35.0% |
| ! | AGTTAGTGTGTTACTGTCTA+TGG | + | chr8.1:39613299-39613318 | MS.gene009124:intron | 35.0% |
| ! | ATATATATAGGGAGCGTATC+CGG | - | chr8.1:39610232-39610251 | None:intergenic | 35.0% |
| ! | ATCTTTTTGTCTCTTCATGG+AGG | - | chr8.1:39608328-39608347 | None:intergenic | 35.0% |
| ! | CAGTATGAATCTGGAATTGA+AGG | - | chr8.1:39614271-39614290 | None:intergenic | 35.0% |
| ! | CATGATGACTTTTCTCACAA+TGG | + | chr8.1:39612723-39612742 | MS.gene009124:intron | 35.0% |
| ! | CTTTTGCAGTCATCAACATA+TGG | + | chr8.1:39611411-39611430 | MS.gene009124:intron | 35.0% |
| ! | GCATCAGTGTTGTTAAATAG+CGG | - | chr8.1:39613867-39613886 | None:intergenic | 35.0% |
| ! | GGATGTTTGAAATCAACAAG+AGG | - | chr8.1:39614086-39614105 | None:intergenic | 35.0% |
| ! | TCCACAATAGGTGTTATCAA+TGG | + | chr8.1:39613230-39613249 | MS.gene009124:intron | 35.0% |
| ! | TCTAGGAGTTGCATTTTTGA+AGG | + | chr8.1:39612746-39612765 | MS.gene009124:intron | 35.0% |
| ! | TGACATTCGTTTTCATCCAT+AGG | - | chr8.1:39614116-39614135 | None:intergenic | 35.0% |
| ! | TGCATAGGAATTTTGCTTGA+GGG | - | chr8.1:39613675-39613694 | None:intergenic | 35.0% |
| ! | TGTGTTTAACTTATGCGTAG+CGG | + | chr8.1:39608724-39608743 | MS.gene009124:intron | 35.0% |
| ! | TTGAAGTCTTGATTTTGTGC+AGG | + | chr8.1:39612375-39612394 | MS.gene009124:intron | 35.0% |
| ! | TTGCATAGGAATTTTGCTTG+AGG | - | chr8.1:39613676-39613695 | None:intergenic | 35.0% |
| ! | TTTGTAGGTATTGCACAGAA+GGG | + | chr8.1:39610041-39610060 | MS.gene009124:intron | 35.0% |
| ! | TTTTCATCCATAGGATTCAC+TGG | - | chr8.1:39614107-39614126 | None:intergenic | 35.0% |
| !! | AAAAATGGCGGATACAATAG+GGG | + | chr8.1:39613325-39613344 | MS.gene009124:intron | 35.0% |
| !! | ACAAAGCATTGCCAAAATAC+CGG | + | chr8.1:39610897-39610916 | MS.gene009124:intron | 35.0% |
| !! | AGAAAAATGGCGGATACAAT+AGG | + | chr8.1:39613323-39613342 | MS.gene009124:intron | 35.0% |
| !! | AGAAGTTCTGAAAAGAACGA+AGG | - | chr8.1:39614205-39614224 | None:intergenic | 35.0% |
| !! | ATATGGCAAGGTTCTTGTTT+TGG | + | chr8.1:39611428-39611447 | MS.gene009124:CDS | 35.0% |
| !! | CAATGGTAAATAGCGGATTA+CGG | + | chr8.1:39613247-39613266 | MS.gene009124:intron | 35.0% |
| !! | CTCTATTTCTAACCCCAAAA+AGG | + | chr8.1:39611521-39611540 | MS.gene009124:CDS | 35.0% |
| !! | CTTCTAAAGTCACACATGAT+TGG | - | chr8.1:39612566-39612585 | None:intergenic | 35.0% |
| !! | GAAAAATGGCGGATACAATA+GGG | + | chr8.1:39613324-39613343 | MS.gene009124:intron | 35.0% |
| !! | TGCATCAATCTTTTGAAGGT+TGG | + | chr8.1:39609825-39609844 | MS.gene009124:intron | 35.0% |
| !! | TGTTTGTGTTGGTGATTCAT+TGG | + | chr8.1:39608684-39608703 | MS.gene009124:intron | 35.0% |
| !! | TTTCTGAAATTAGCCCAATG+TGG | + | chr8.1:39608454-39608473 | MS.gene009124:CDS | 35.0% |
| !!! | AAAGCCATTTTTTCAGTCAG+TGG | + | chr8.1:39612940-39612959 | MS.gene009124:CDS | 35.0% |
| !!! | ATTTTTTCAGTCAGTGGCAA+GGG | + | chr8.1:39612946-39612965 | MS.gene009124:CDS | 35.0% |
| !!! | GATTTTTTACCAGGTGCTAT+AGG | - | chr8.1:39613357-39613376 | None:intergenic | 35.0% |
| !!! | GCTCTGGATGTATTTTTTAC+TGG | + | chr8.1:39610607-39610626 | MS.gene009124:intron | 35.0% |
| AAAAACTAACCAGGCCACAT+TGG | - | chr8.1:39608471-39608490 | None:intergenic | 40.0% | |
| AAAACTAACCAGGCCACATT+GGG | - | chr8.1:39608470-39608489 | None:intergenic | 40.0% | |
| AAAATCCGCCATGCCATAAA+TGG | + | chr8.1:39613371-39613390 | MS.gene009124:intron | 40.0% | |
| AACAAAGACGTGCAGTTTGT+AGG | + | chr8.1:39610026-39610045 | MS.gene009124:intron | 40.0% | |
| AACTCTGGTTGTAACTTTGC+AGG | + | chr8.1:39611220-39611239 | MS.gene009124:intron | 40.0% | |
| AAGAACTCCACTAATCACAC+AGG | - | chr8.1:39609368-39609387 | None:intergenic | 40.0% | |
| AAGGCTCTGTCAATTATGCT+TGG | + | chr8.1:39613068-39613087 | MS.gene009124:CDS | 40.0% | |
| ACAATGGATATTGAAGGTGG+TGG | + | chr8.1:39608381-39608400 | MS.gene009124:CDS | 40.0% | |
| ACTGCATCATAAGTTCCTTC+TGG | - | chr8.1:39612777-39612796 | None:intergenic | 40.0% | |
| AGAAAGCTGCAGTATGAATC+TGG | - | chr8.1:39614280-39614299 | None:intergenic | 40.0% | |
| AGAAGCGATTCAAACGAATG+GGG | - | chr8.1:39609621-39609640 | None:intergenic | 40.0% | |
| ATACCTTGCAGAACTCAAAC+AGG | - | chr8.1:39613510-39613529 | None:intergenic | 40.0% | |
| ATAGGTTTAGTTGCTGGGAA+AGG | + | chr8.1:39608819-39608838 | MS.gene009124:intron | 40.0% | |
| CAAACATCCAGTGAATCCTA+TGG | + | chr8.1:39614097-39614116 | MS.gene009124:CDS | 40.0% | |
| CAATAAATAAGAGCTCTCGC+CGG | + | chr8.1:39610210-39610229 | MS.gene009124:intron | 40.0% | |
| CACAGATGAGGTTGACATTA+CGG | - | chr8.1:39612107-39612126 | None:intergenic | 40.0% | |
| CAGCAATAGGTTTCACAACT+TGG | + | chr8.1:39609738-39609757 | MS.gene009124:intron | 40.0% | |
| CATGTTCCCTGATATTTGCT+TGG | + | chr8.1:39609074-39609093 | MS.gene009124:intron | 40.0% | |
| CCAGAGCTTAAGAATTAGAG+AGG | - | chr8.1:39610594-39610613 | None:intergenic | 40.0% | |
| CCTCTCTAATTCTTAAGCTC+TGG | + | chr8.1:39610591-39610610 | MS.gene009124:intron | 40.0% | |
| CTAATTTCAGAAAACCACCC+AGG | - | chr8.1:39608447-39608466 | None:intergenic | 40.0% | |
| CTACAGTTCCTACATATCCA+AGG | + | chr8.1:39613092-39613111 | MS.gene009124:CDS | 40.0% | |
| CTTCTTATTGAAGACGTGTC+TGG | + | chr8.1:39608585-39608604 | MS.gene009124:intron | 40.0% | |
| GAGTTATTCAGCTCACAGAA+AGG | + | chr8.1:39611454-39611473 | MS.gene009124:CDS | 40.0% | |
| GATAAGGACCCAAATGGTAA+TGG | + | chr8.1:39608405-39608424 | MS.gene009124:CDS | 40.0% | |
| GATGACTGCAAAAGACATCA+TGG | - | chr8.1:39611405-39611424 | None:intergenic | 40.0% | |
| GGGTTAGAAATAGAGCAAAG+AGG | - | chr8.1:39611516-39611535 | None:intergenic | 40.0% | |
| GTACATGCCAAGCAAATATC+AGG | - | chr8.1:39609084-39609103 | None:intergenic | 40.0% | |
| GTAGAAGCGATTCAAACGAA+TGG | - | chr8.1:39609623-39609642 | None:intergenic | 40.0% | |
| GTCAGATTACCAGAAAGTCA+TGG | + | chr8.1:39611288-39611307 | MS.gene009124:CDS | 40.0% | |
| GTGTTTCATCTGTGATTCCT+GGG | + | chr8.1:39608427-39608446 | MS.gene009124:CDS | 40.0% | |
| GTTGTCAATTGCGAATCACA+AGG | + | chr8.1:39613702-39613721 | MS.gene009124:intron | 40.0% | |
| TAAACCCTACTGCAACTTCA+GGG | - | chr8.1:39612417-39612436 | None:intergenic | 40.0% | |
| TCACCGTCTCAACATTGTAT+GGG | - | chr8.1:39609947-39609966 | None:intergenic | 40.0% | |
| TGACATTGAGTGAAGAGGTT+TGG | + | chr8.1:39608922-39608941 | MS.gene009124:intron | 40.0% | |
| TGAGTGAAGAGGTTTGGATT+TGG | + | chr8.1:39608928-39608947 | MS.gene009124:intron | 40.0% | |
| TGATTCGCAATTGACAACAC+CGG | - | chr8.1:39613700-39613719 | None:intergenic | 40.0% | |
| TGTCTATGGCAGAAAAATGG+CGG | + | chr8.1:39613313-39613332 | MS.gene009124:intron | 40.0% | |
| TTAAACCCTACTGCAACTTC+AGG | - | chr8.1:39612418-39612437 | None:intergenic | 40.0% | |
| TTACTTGAACCTCATGTACC+TGG | - | chr8.1:39611318-39611337 | None:intergenic | 40.0% | |
| TTCACCGTCTCAACATTGTA+TGG | - | chr8.1:39609948-39609967 | None:intergenic | 40.0% | |
| TTGTCTTTACTTCCTCTAGG+AGG | + | chr8.1:39613915-39613934 | MS.gene009124:intron | 40.0% | |
| TTTATGCTTTGCTCAACCGA+GGG | + | chr8.1:39614059-39614078 | MS.gene009124:CDS | 40.0% | |
| ! | AAAGGACTAACCCGGTATTT+TGG | - | chr8.1:39610911-39610930 | None:intergenic | 40.0% |
| ! | AAGTGGAAACAATTTGGTGG+AGG | - | chr8.1:39609591-39609610 | None:intergenic | 40.0% |
| ! | AGTGGAAACAATTTGGTGGA+GGG | - | chr8.1:39609590-39609609 | None:intergenic | 40.0% |
| ! | CTCAATACCCTTTTGCATGT+TGG | + | chr8.1:39608503-39608522 | MS.gene009124:intron | 40.0% |
| ! | CTTGCCACTGACTGAAAAAA+TGG | - | chr8.1:39612947-39612966 | None:intergenic | 40.0% |
| ! | GACTTTTCTCACAATGGTCT+AGG | + | chr8.1:39612729-39612748 | MS.gene009124:intron | 40.0% |
| ! | GCATAGGAATTTTGCTTGAG+GGG | - | chr8.1:39613674-39613693 | None:intergenic | 40.0% |
| ! | GTGCCACAATTGCTGTTATT+TGG | + | chr8.1:39609211-39609230 | MS.gene009124:intron | 40.0% |
| ! | GTTTGTAGGTATTGCACAGA+AGG | + | chr8.1:39610040-39610059 | MS.gene009124:intron | 40.0% |
| ! | TATTGAAGGTGGTGGTGATA+AGG | + | chr8.1:39608389-39608408 | MS.gene009124:CDS | 40.0% |
| ! | TGTGGTAGTTTGGCTTACTT+TGG | + | chr8.1:39609420-39609439 | MS.gene009124:intron | 40.0% |
| ! | TTGTAGGTATTGCACAGAAG+GGG | + | chr8.1:39610042-39610061 | MS.gene009124:intron | 40.0% |
| ! | TTTCCTGTTTGAGTTCTGCA+AGG | + | chr8.1:39613504-39613523 | MS.gene009124:intron | 40.0% |
| ! | TTTTATGCTTTGCTCAACCG+AGG | + | chr8.1:39614058-39614077 | MS.gene009124:CDS | 40.0% |
| ! | TTTTCCCTGAAGTTGCAGTA+GGG | + | chr8.1:39612410-39612429 | MS.gene009124:CDS | 40.0% |
| ! | TTTTTCCCTGAAGTTGCAGT+AGG | + | chr8.1:39612409-39612428 | MS.gene009124:CDS | 40.0% |
| !! | AGTCAGACCCATTTTGGAAA+AGG | - | chr8.1:39613428-39613447 | None:intergenic | 40.0% |
| !! | CAAAGCATTGCCAAAATACC+GGG | + | chr8.1:39610898-39610917 | MS.gene009124:intron | 40.0% |
| !! | GTCAGACCCATTTTGGAAAA+GGG | - | chr8.1:39613427-39613446 | None:intergenic | 40.0% |
| !!! | CATTTTTTCAGTCAGTGGCA+AGG | + | chr8.1:39612945-39612964 | MS.gene009124:CDS | 40.0% |
| !!! | TAGGTTTTGGTTATTGGTGG+AGG | + | chr8.1:39611907-39611926 | MS.gene009124:intron | 40.0% |
| ACGAATGGGGAAGACAAAAG+TGG | - | chr8.1:39609608-39609627 | None:intergenic | 45.0% | |
| AGACACCATTTATGGCATGG+CGG | - | chr8.1:39613379-39613398 | None:intergenic | 45.0% | |
| AGGTAAGAGGGAGAATTGAC+TGG | + | chr8.1:39610099-39610118 | MS.gene009124:intron | 45.0% | |
| ATATCCTTAAGGTCCTGCTC+AGG | + | chr8.1:39612907-39612926 | MS.gene009124:intron | 45.0% | |
| ATCTTCCTCTTCGCAAACGA+CGG | - | chr8.1:39614308-39614327 | None:intergenic | 45.0% | |
| CTAAAACCTGAACCTCCTAG+AGG | - | chr8.1:39613930-39613949 | None:intergenic | 45.0% | |
| GAAATCAACAAGAGGTCCCT+CGG | - | chr8.1:39614078-39614097 | None:intergenic | 45.0% | |
| GCAGTCATCAACATATGGCA+AGG | + | chr8.1:39611416-39611435 | MS.gene009124:intron | 45.0% | |
| GGTGTTTCATCTGTGATTCC+TGG | + | chr8.1:39608426-39608445 | MS.gene009124:CDS | 45.0% | |
| GTGGATTCATCTGACCCTAT+TGG | + | chr8.1:39612801-39612820 | MS.gene009124:CDS | 45.0% | |
| TAACAGCAATTGTGGCACTG+TGG | - | chr8.1:39609209-39609228 | None:intergenic | 45.0% | |
| TAAGAGGGAGAATTGACTGG+AGG | + | chr8.1:39610102-39610121 | MS.gene009124:intron | 45.0% | |
| TACCAATCCTAGGACCCAAT+CGG | + | chr8.1:39610750-39610769 | MS.gene009124:intron | 45.0% | |
| TAGGGTTGACTGAGTGATAG+TGG | + | chr8.1:39610072-39610091 | MS.gene009124:intron | 45.0% | |
| TCGCTTCTACCTTTCTTCCA+TGG | + | chr8.1:39609633-39609652 | MS.gene009124:intron | 45.0% | |
| TCGTTTGCGAAGAGGAAGAT+TGG | + | chr8.1:39614308-39614327 | MS.gene009124:CDS | 45.0% | |
| TGCTGGTATAAACACTTGCG+AGG | + | chr8.1:39611644-39611663 | MS.gene009124:intron | 45.0% | |
| TGGGGTTTCGGTTTCAACAA+TGG | + | chr8.1:39608365-39608384 | MS.gene009124:CDS | 45.0% | |
| TGTGGTCACAACTATGGTTG+TGG | + | chr8.1:39612081-39612100 | MS.gene009124:intron | 45.0% | |
| TTGCGAATCACAAGGGATAG+CGG | + | chr8.1:39613710-39613729 | MS.gene009124:intron | 45.0% | |
| TTGGTTATTGGTGGAGGTGA+TGG | + | chr8.1:39611913-39611932 | MS.gene009124:CDS | 45.0% | |
| TTTCATCTGTGATTCCTGGG+TGG | + | chr8.1:39608430-39608449 | MS.gene009124:CDS | 45.0% | |
| ! | GCACTCAGGCTGAAAGTATA+TGG | + | chr8.1:39612993-39613012 | MS.gene009124:CDS | 45.0% |
| ! | GGTGATTCATTGGCTGGAAA+AGG | + | chr8.1:39608694-39608713 | MS.gene009124:intron | 45.0% |
| ! | GTGGAAACAATTTGGTGGAG+GGG | - | chr8.1:39609589-39609608 | None:intergenic | 45.0% |
| ! | TTACTTCCTCTAGGAGGTTC+AGG | + | chr8.1:39613921-39613940 | MS.gene009124:intron | 45.0% |
| ! | TTTTCGAAAAGCTCCTGAGC+AGG | - | chr8.1:39612923-39612942 | None:intergenic | 45.0% |
| !! | GATAGTGGAAGGAGGTAAGA+GGG | + | chr8.1:39610087-39610106 | MS.gene009124:intron | 45.0% |
| !! | GTTGACTGAGTGATAGTGGA+AGG | + | chr8.1:39610076-39610095 | MS.gene009124:intron | 45.0% |
| !! | TGATAGTGGAAGGAGGTAAG+AGG | + | chr8.1:39610086-39610105 | MS.gene009124:intron | 45.0% |
| !! | TGTGTTGGTGATTCATTGGC+TGG | + | chr8.1:39608688-39608707 | MS.gene009124:intron | 45.0% |
| !! | TTGACAACACCGGTTTGCAT+AGG | - | chr8.1:39613690-39613709 | None:intergenic | 45.0% |
| !! | TTTTTGAAGGCAGCTCCAGA+AGG | + | chr8.1:39612759-39612778 | MS.gene009124:CDS | 45.0% |
| !!! | GGCAAGGTTCTTGTTTTGGA+TGG | + | chr8.1:39611432-39611451 | MS.gene009124:CDS | 45.0% |
| !!! | TTTGTTTTTTTTTTTTTTTT+TGG | - | chr8.1:39610882-39610901 | None:intergenic | 5.0% |
| AAAATGGGTCTGACTCTCCG+AGG | + | chr8.1:39613433-39613452 | MS.gene009124:intron | 50.0% | |
| AACTAGACCGATTGGGTCCT+AGG | - | chr8.1:39610760-39610779 | None:intergenic | 50.0% | |
| ACATCGGCACTATTCCGTAG+TGG | - | chr8.1:39609290-39609309 | None:intergenic | 50.0% | |
| AGGAGGAGTTATGTGCACTC+AGG | + | chr8.1:39612979-39612998 | MS.gene009124:CDS | 50.0% | |
| ATGTAGCTCCCACCATAGCA+GGG | - | chr8.1:39613460-39613479 | None:intergenic | 50.0% | |
| CACAGAAGGGGATGGCAATA+GGG | + | chr8.1:39610054-39610073 | MS.gene009124:intron | 50.0% | |
| CATGGTCTTCCAGGTACATG+AGG | + | chr8.1:39611306-39611325 | MS.gene009124:intron | 50.0% | |
| CCAGAAAGTCATGGTCTTCC+AGG | + | chr8.1:39611297-39611316 | MS.gene009124:CDS | 50.0% | |
| CCTGGAAGACCATGACTTTC+TGG | - | chr8.1:39611300-39611319 | None:intergenic | 50.0% | |
| GAAATTAGCCCAATGTGGCC+TGG | + | chr8.1:39608459-39608478 | MS.gene009124:CDS | 50.0% | |
| GGTGGTGATAAGGACCCAAA+TGG | + | chr8.1:39608399-39608418 | MS.gene009124:CDS | 50.0% | |
| TATGTAGCTCCCACCATAGC+AGG | - | chr8.1:39613461-39613480 | None:intergenic | 50.0% | |
| TGAGTGCACATAACTCCTCC+TGG | - | chr8.1:39612980-39612999 | None:intergenic | 50.0% | |
| ! | AGGTATTGCACAGAAGGGGA+TGG | + | chr8.1:39610046-39610065 | MS.gene009124:intron | 50.0% |
| ! | GTGACTCTTCGCATTGGTGA+TGG | + | chr8.1:39612448-39612467 | MS.gene009124:CDS | 50.0% |
| ! | GTTATTGGTGGAGGTGATGG+TGG | + | chr8.1:39611916-39611935 | MS.gene009124:CDS | 50.0% |
| ! | TCGGAGAGTCAGACCCATTT+TGG | - | chr8.1:39613434-39613453 | None:intergenic | 50.0% |
| ! | TGCAGAGAGTATGGTGGAAC+TGG | + | chr8.1:39608299-39608318 | MS.gene009124:CDS | 50.0% |
| !! | AATGACGTGCTACTTCTCGC+AGG | - | chr8.1:39611945-39611964 | None:intergenic | 50.0% |
| !! | GACTGAGTGATAGTGGAAGG+AGG | + | chr8.1:39610079-39610098 | MS.gene009124:intron | 50.0% |
| !!! | GGCATGGCGGATTTTTTACC+AGG | - | chr8.1:39613366-39613385 | None:intergenic | 50.0% |
| AGCTCCTGAGCAGGACCTTA+AGG | - | chr8.1:39612914-39612933 | None:intergenic | 55.0% | |
| CCAATGCGAAGAGTCACACG+TGG | - | chr8.1:39612445-39612464 | None:intergenic | 55.0% | |
| CCACGTGTGACTCTTCGCAT+TGG | + | chr8.1:39612442-39612461 | MS.gene009124:CDS | 55.0% | |
| GACCGATTGGGTCCTAGGAT+TGG | - | chr8.1:39610755-39610774 | None:intergenic | 55.0% | |
| GCACAGAAGGGGATGGCAAT+AGG | + | chr8.1:39610053-39610072 | MS.gene009124:intron | 55.0% | |
| GTTTGCCGTCGTTTGCGAAG+AGG | + | chr8.1:39614300-39614319 | MS.gene009124:CDS | 55.0% | |
| ACTCTCCGAGGACCCTGCTA+TGG | + | chr8.1:39613445-39613464 | MS.gene009124:intron | 60.0% | |
| TCCCACCATAGCAGGGTCCT+CGG | - | chr8.1:39613453-39613472 | None:intergenic | 60.0% | |
| TCCGAGGACCCTGCTATGGT+GGG | + | chr8.1:39613449-39613468 | MS.gene009124:intron | 60.0% | |
| ! | GGCTGCTGCAGAGAGTATGG+TGG | + | chr8.1:39608293-39608312 | MS.gene009124:CDS | 60.0% |
| CTCCGAGGACCCTGCTATGG+TGG | + | chr8.1:39613448-39613467 | MS.gene009124:intron | 65.0% | |
| GCAAGGGCTCTTCGTCCAGG+AGG | + | chr8.1:39612962-39612981 | MS.gene009124:CDS | 65.0% | |
| GGGCTGCGACCTATAGCACC+TGG | + | chr8.1:39613345-39613364 | MS.gene009124:intron | 65.0% | |
| GTGGCAAGGGCTCTTCGTCC+AGG | + | chr8.1:39612959-39612978 | MS.gene009124:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 39608291 | 39614346 | 39608291 | ID=MS.gene009124 |
| chr8.1 | mRNA | 39608291 | 39614346 | 39608291 | ID=MS.gene009124.t1;Parent=MS.gene009124 |
| chr8.1 | exon | 39608291 | 39608480 | 39608291 | ID=MS.gene009124.t1.exon1;Parent=MS.gene009124.t1 |
| chr8.1 | CDS | 39608291 | 39608480 | 39608291 | ID=cds.MS.gene009124.t1;Parent=MS.gene009124.t1 |
| chr8.1 | exon | 39611242 | 39611318 | 39611242 | ID=MS.gene009124.t1.exon2;Parent=MS.gene009124.t1 |
| chr8.1 | CDS | 39611242 | 39611318 | 39611242 | ID=cds.MS.gene009124.t1;Parent=MS.gene009124.t1 |
| chr8.1 | exon | 39611420 | 39611542 | 39611420 | ID=MS.gene009124.t1.exon3;Parent=MS.gene009124.t1 |
| chr8.1 | CDS | 39611420 | 39611542 | 39611420 | ID=cds.MS.gene009124.t1;Parent=MS.gene009124.t1 |
| chr8.1 | exon | 39611910 | 39612014 | 39611910 | ID=MS.gene009124.t1.exon4;Parent=MS.gene009124.t1 |
| chr8.1 | CDS | 39611910 | 39612014 | 39611910 | ID=cds.MS.gene009124.t1;Parent=MS.gene009124.t1 |
| chr8.1 | exon | 39612397 | 39612469 | 39612397 | ID=MS.gene009124.t1.exon5;Parent=MS.gene009124.t1 |
| chr8.1 | CDS | 39612397 | 39612469 | 39612397 | ID=cds.MS.gene009124.t1;Parent=MS.gene009124.t1 |
| chr8.1 | exon | 39612751 | 39612822 | 39612751 | ID=MS.gene009124.t1.exon6;Parent=MS.gene009124.t1 |
| chr8.1 | CDS | 39612751 | 39612822 | 39612751 | ID=cds.MS.gene009124.t1;Parent=MS.gene009124.t1 |
| chr8.1 | exon | 39612918 | 39613113 | 39612918 | ID=MS.gene009124.t1.exon7;Parent=MS.gene009124.t1 |
| chr8.1 | CDS | 39612918 | 39613113 | 39612918 | ID=cds.MS.gene009124.t1;Parent=MS.gene009124.t1 |
| chr8.1 | exon | 39614046 | 39614172 | 39614046 | ID=MS.gene009124.t1.exon8;Parent=MS.gene009124.t1 |
| chr8.1 | CDS | 39614046 | 39614172 | 39614046 | ID=cds.MS.gene009124.t1;Parent=MS.gene009124.t1 |
| chr8.1 | exon | 39614281 | 39614346 | 39614281 | ID=MS.gene009124.t1.exon9;Parent=MS.gene009124.t1 |
| chr8.1 | CDS | 39614281 | 39614346 | 39614281 | ID=cds.MS.gene009124.t1;Parent=MS.gene009124.t1 |
| Gene Sequence |
| Protein sequence |
