AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene009772

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009772.t1 MTR_5g073040 97.554 327 7 1 1 326 1 327 0.0 664
MS.gene009772.t1 MTR_8g092080 30.968 310 185 9 10 315 23 307 1.28e-38 139
MS.gene009772.t1 MTR_8g092080 30.208 192 123 4 30 216 125 310 6.68e-17 80.5
MS.gene009772.t1 MTR_1g097890 31.959 291 170 8 35 322 48 313 1.21e-37 137
MS.gene009772.t1 MTR_8g098240 32.609 276 174 6 40 313 322 587 2.55e-35 135
MS.gene009772.t1 MTR_8g098240 26.131 199 135 3 112 310 302 488 1.05e-12 68.9
MS.gene009772.t1 MTR_6g015860 28.621 290 181 6 24 293 3 286 1.10e-34 129
MS.gene009772.t1 MTR_6g015860 22.727 176 129 4 148 318 33 206 1.95e-11 64.3
MS.gene009772.t1 MTR_3g025800 29.254 335 196 7 23 323 11 338 2.09e-34 129
MS.gene009772.t1 MTR_7g015870 31.071 280 163 8 50 307 37 308 7.11e-34 127
MS.gene009772.t1 MTR_7g015870 26.396 197 134 6 128 319 25 215 6.11e-15 74.7
MS.gene009772.t1 MTR_7g015870 31.071 280 163 8 50 307 33 304 1.31e-33 126
MS.gene009772.t1 MTR_7g015870 25.381 197 136 5 128 319 21 211 9.43e-15 74.3
MS.gene009772.t1 MTR_5g009500 27.937 315 202 6 24 313 24 338 1.11e-32 124
MS.gene009772.t1 MTR_1g012030 28.070 285 183 7 38 313 139 410 1.01e-31 123
MS.gene009772.t1 MTR_3g107510 27.336 289 194 7 38 320 122 400 1.18e-31 122
MS.gene009772.t1 MTR_3g107510 26.108 203 131 7 20 211 199 393 7.50e-12 66.2
MS.gene009772.t1 MTR_6g034515 29.391 279 185 6 49 321 78 350 1.83e-30 119
MS.gene009772.t1 MTR_2g032610 31.023 303 174 11 30 307 21 313 1.97e-29 115
MS.gene009772.t1 MTR_8g027975 27.723 303 192 6 38 313 51 353 2.26e-28 113
MS.gene009772.t1 MTR_8g027975 24.510 204 142 5 117 313 39 237 6.57e-14 72.0
MS.gene009772.t1 MTR_4g114320 27.273 286 193 8 38 318 123 398 1.03e-26 108
MS.gene009772.t1 MTR_7g109135 29.965 287 184 9 40 313 24 306 2.86e-26 106
MS.gene009772.t1 MTR_3g098460 28.155 309 198 10 14 310 181 477 2.36e-25 106
MS.gene009772.t1 MTR_3g098460 29.348 184 120 4 38 212 299 481 1.59e-19 89.4
MS.gene009772.t1 MTR_3g098460 25.758 198 133 5 122 316 198 384 1.30e-12 68.6
MS.gene009772.t1 MTR_8g019480 27.653 311 173 7 52 318 47 349 3.58e-25 103
MS.gene009772.t1 MTR_8g019480 29.688 192 106 6 134 310 41 218 1.92e-12 67.8
MS.gene009772.t1 MTR_7g084400 25.974 308 199 7 17 311 192 483 3.92e-25 105
MS.gene009772.t1 MTR_7g084400 29.050 179 122 2 38 212 309 486 2.97e-19 88.6
MS.gene009772.t1 MTR_7g084400 29.255 188 128 3 134 320 215 398 1.33e-11 65.5
MS.gene009772.t1 MTR_8g096050 28.428 299 190 10 25 311 214 500 9.42e-25 104
MS.gene009772.t1 MTR_8g096050 28.962 183 122 2 38 212 321 503 1.40e-20 92.4
MS.gene009772.t1 MTR_4g119770 25.938 320 189 8 40 317 16 329 3.29e-24 100
MS.gene009772.t1 MTR_4g119770 23.113 212 138 4 28 215 119 329 7.29e-12 65.9
MS.gene009772.t1 MTR_7g109135 28.214 280 191 6 40 313 24 299 2.02e-23 98.6
MS.gene009772.t1 MTR_2g436930 26.899 316 185 8 40 315 17 326 2.21e-23 99.0
MS.gene009772.t1 MTR_2g436930 25.238 210 132 4 29 214 119 327 1.71e-12 67.8
MS.gene009772.t1 MTR_2g436930 25.688 218 131 6 129 324 12 220 3.19e-12 67.0
MS.gene009772.t1 MTR_7g064980 26.000 300 200 5 38 319 25 320 3.14e-23 98.2
MS.gene009772.t1 MTR_1g095780 28.028 289 178 8 39 320 526 791 6.14e-23 100
MS.gene009772.t1 MTR_4g057850 28.975 283 171 10 39 303 23 293 1.16e-22 96.7
MS.gene009772.t1 MTR_1g087840 27.737 274 179 6 54 313 35 303 2.85e-22 95.5
MS.gene009772.t1 MTR_1g087840 28.889 180 112 6 50 216 132 308 8.52e-11 62.4
MS.gene009772.t1 MTR_6g091800 25.667 300 189 7 38 314 19 307 1.02e-21 94.0
MS.gene009772.t1 MTR_8g066975 30.263 304 165 13 38 311 8 294 1.36e-21 93.2
MS.gene009772.t1 MTR_8g066975 26.961 204 128 9 28 212 96 297 9.84e-11 62.0
MS.gene009772.t1 MTR_5g081150 27.148 291 188 9 38 310 34 318 3.63e-21 92.4
MS.gene009772.t1 MTR_5g081150 33.537 164 100 3 166 325 75 233 2.22e-14 73.2
MS.gene009772.t1 MTR_5g081150 29.148 223 137 6 8 215 109 325 4.26e-14 72.4
MS.gene009772.t1 MTR_5g055410 26.619 278 177 6 54 313 37 305 1.02e-20 91.7
MS.gene009772.t1 MTR_5g055410 31.111 180 107 7 54 218 135 312 1.40e-11 65.1
MS.gene009772.t1 MTR_7g068340 26.882 279 179 6 54 319 103 369 1.18e-20 92.0
MS.gene009772.t1 MTR_7g109135 30.603 232 148 8 91 313 1 228 2.61e-20 88.6
MS.gene009772.t1 MTR_7g109135 31.792 173 98 7 54 211 61 228 1.60e-11 63.9
MS.gene009772.t1 MTR_8g076760 26.087 276 180 9 52 307 28 299 1.07e-19 88.2
MS.gene009772.t1 MTR_3g100570 25.962 312 192 9 39 316 7 313 2.68e-19 87.0
MS.gene009772.t1 MTR_8g099910 26.214 309 195 8 22 312 51 344 4.28e-19 87.0
MS.gene009772.t1 MTR_2g102010 28.302 265 160 7 39 287 18 268 4.46e-19 86.3
MS.gene009772.t1 MTR_2g102010 29.834 181 108 6 48 213 120 296 1.05e-14 73.9
MS.gene009772.t1 MTR_5g030530 29.667 300 172 13 38 311 8 294 8.89e-19 85.5
MS.gene009772.t1 MTR_6g033280 26.897 290 185 6 33 310 58 332 2.33e-18 85.1
MS.gene009772.t1 MTR_6g091800 23.765 324 189 7 38 314 19 331 2.55e-18 84.7
MS.gene009772.t1 MTR_4g094578 24.211 285 191 6 38 310 29 300 3.45e-18 84.0
MS.gene009772.t1 MTR_3g104810 25.658 304 168 7 51 307 45 337 4.55e-18 84.0
MS.gene009772.t1 MTR_5g024770 25.704 284 174 6 33 310 16 268 4.82e-18 83.6
MS.gene009772.t1 MTR_4g005330 22.289 332 207 10 8 313 47 353 6.55e-18 84.0
MS.gene009772.t1 MTR_4g005330 22.074 299 197 8 39 313 1 287 2.12e-17 81.6
MS.gene009772.t1 MTR_6g034145 26.236 263 161 6 75 314 1 253 3.48e-17 80.5
MS.gene009772.t1 MTR_4g012850 27.308 260 170 6 38 287 16 266 4.07e-17 80.9
MS.gene009772.t1 MTR_4g012850 29.442 197 124 4 27 211 99 292 5.40e-16 77.4
MS.gene009772.t1 MTR_6g092210 26.848 257 161 6 75 314 1 247 4.45e-17 79.7
MS.gene009772.t1 MTR_3g104600 26.861 309 187 8 34 313 31 329 6.82e-17 80.5
MS.gene009772.t1 MTR_2g436930 27.615 239 140 7 104 315 4 236 8.64e-17 79.0
MS.gene009772.t1 MTR_2g436930 25.238 210 132 4 29 214 29 237 8.99e-13 67.4
MS.gene009772.t1 MTR_6g091800 26.250 240 143 7 38 254 19 247 2.83e-15 75.1
MS.gene009772.t1 MTR_6g091800 26.250 240 143 7 38 254 19 247 4.21e-15 74.7
MS.gene009772.t1 MTR_4g119770 26.295 251 144 7 40 255 16 260 5.26e-15 73.9
MS.gene009772.t1 MTR_4g119770 24.074 216 139 4 129 324 11 221 4.24e-11 62.8
MS.gene009772.t1 MTR_5g081150 33.537 164 100 3 166 325 75 233 7.62e-15 73.6
MS.gene009772.t1 MTR_5g081150 33.537 164 100 3 166 325 75 233 8.51e-15 73.6
MS.gene009772.t1 MTR_7g066690 26.263 297 182 12 40 314 19 300 8.83e-15 73.9
MS.gene009772.t1 MTR_7g083790 26.224 286 183 7 40 312 83 353 1.25e-14 74.3
MS.gene009772.t1 MTR_4g088545 27.178 287 186 7 39 307 13 294 1.91e-14 73.2
MS.gene009772.t1 MTR_1g088995 29.258 229 146 6 33 255 32 250 2.49e-14 72.8
MS.gene009772.t1 MTR_4g016730 24.908 273 170 7 54 313 105 355 2.70e-14 73.2
MS.gene009772.t1 MTR_4g016730 22.222 180 126 3 30 209 188 353 1.59e-11 65.1
MS.gene009772.t1 MTR_8g068890 24.841 314 191 8 39 316 11 315 3.08e-14 72.8
MS.gene009772.t1 MTR_5g032420 24.688 320 191 7 39 316 11 322 4.86e-14 72.0
MS.gene009772.t1 MTR_1g090330 22.887 284 191 8 42 307 18 291 6.29e-14 71.6
MS.gene009772.t1 MTR_4g018750 26.102 295 181 13 40 312 17 296 1.33e-13 70.5
MS.gene009772.t1 MTR_3g462140 29.012 162 108 3 54 209 136 296 2.51e-13 69.7
MS.gene009772.t1 MTR_3g462140 25.413 303 194 11 32 314 9 299 5.84e-12 65.9
MS.gene009772.t1 MTR_7g084400 25.123 203 137 4 17 209 186 383 2.17e-12 67.8
MS.gene009772.t1 MTR_7g084400 29.255 188 128 3 134 320 209 392 2.10e-11 64.7
MS.gene009772.t1 MTR_8g090210 25.753 299 188 9 33 310 109 394 3.05e-12 67.4
MS.gene009772.t1 MTR_8g090210 27.322 183 121 5 131 311 109 281 4.24e-11 63.9
MS.gene009772.t1 MTR_3g074490 25.888 197 126 6 131 321 115 297 9.95e-12 65.9
MS.gene009772.t1 MTR_3g074490 25.743 303 183 11 33 310 115 400 4.52e-11 63.9
MS.gene009772.t1 MTR_7g109135 31.792 173 98 7 54 211 40 207 1.38e-11 63.5
MS.gene009772.t1 MTR_6g091910 26.974 152 106 1 163 314 63 209 1.40e-11 63.5
MS.gene009772.t1 MTR_4g088545 27.273 242 157 6 39 262 13 253 1.58e-11 64.3
MS.gene009772.t1 MTR_3g090820 25.781 256 157 8 82 310 135 384 2.00e-11 64.7
MS.gene009772.t1 MTR_4g018750 25.957 235 144 10 40 252 17 243 4.09e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene009772.t1 AT1G07030 73.231 325 74 4 1 317 1 320 9.86e-165 462
MS.gene009772.t1 AT1G07030 28.788 198 125 7 128 322 38 222 1.79e-12 67.8
MS.gene009772.t1 AT2G30160 69.851 335 83 3 1 322 1 330 3.83e-160 450
MS.gene009772.t1 AT1G07025 47.500 160 82 2 24 182 8 166 4.44e-38 133
MS.gene009772.t1 AT1G34065 30.208 288 173 8 35 319 72 334 1.88e-37 137
MS.gene009772.t1 AT1G34065 30.476 210 132 5 14 218 135 335 4.92e-18 84.0
MS.gene009772.t1 AT1G34065 30.208 288 173 8 35 319 79 341 2.49e-37 136
MS.gene009772.t1 AT1G34065 30.476 210 132 5 14 218 142 342 6.51e-18 83.6
MS.gene009772.t1 AT4G39460 31.900 279 162 8 35 310 55 308 4.86e-36 132
MS.gene009772.t1 AT4G39460 30.415 217 133 6 14 223 118 323 1.85e-16 79.3
MS.gene009772.t1 AT4G39460 31.900 279 162 8 35 310 55 308 4.86e-36 132
MS.gene009772.t1 AT4G39460 30.415 217 133 6 14 223 118 323 1.85e-16 79.3
MS.gene009772.t1 AT4G39460 31.900 279 162 8 35 310 55 308 4.86e-36 132
MS.gene009772.t1 AT4G39460 30.415 217 133 6 14 223 118 323 1.85e-16 79.3
MS.gene009772.t1 AT1G74240 30.000 320 187 6 27 315 25 338 1.38e-34 130
MS.gene009772.t1 AT4G11440 30.508 295 193 7 24 313 316 603 2.01e-33 130
MS.gene009772.t1 AT4G11440 30.508 295 193 7 24 313 316 603 2.01e-33 130
MS.gene009772.t1 AT4G32400 28.472 288 190 6 38 319 114 391 4.62e-33 126
MS.gene009772.t1 AT4G32400 26.042 192 124 7 38 218 208 392 1.73e-11 65.1
MS.gene009772.t1 AT5G15640 28.947 304 185 7 30 307 8 306 9.69e-31 118
MS.gene009772.t1 AT5G15640 29.097 299 186 6 30 307 20 313 1.10e-30 118
MS.gene009772.t1 AT1G74240 29.831 295 170 6 52 315 2 290 1.44e-29 115
MS.gene009772.t1 AT4G01100 28.344 314 184 7 38 310 42 355 2.87e-27 110
MS.gene009772.t1 AT4G01100 25.000 204 129 5 135 317 46 246 9.82e-12 65.5
MS.gene009772.t1 AT4G01100 28.383 303 190 8 38 313 42 344 1.01e-26 108
MS.gene009772.t1 AT4G01100 26.842 190 129 4 135 317 46 232 1.10e-14 74.3
MS.gene009772.t1 AT2G37890 26.936 297 199 5 32 313 39 332 3.24e-26 106
MS.gene009772.t1 AT2G37890 31.720 186 116 4 38 214 152 335 7.06e-21 92.0
MS.gene009772.t1 AT2G37890 31.544 149 94 3 172 316 92 236 3.67e-13 69.7
MS.gene009772.t1 AT5G42130 26.690 281 191 8 49 321 129 402 3.40e-26 107
MS.gene009772.t1 AT3G55640 26.174 298 200 6 38 319 38 331 3.63e-26 106
MS.gene009772.t1 AT3G55640 26.174 298 200 6 38 319 38 331 3.63e-26 106
MS.gene009772.t1 AT5G26200 27.113 284 176 5 51 307 52 331 9.32e-26 105
MS.gene009772.t1 AT2G47490 30.292 274 171 7 54 313 33 300 1.04e-25 104
MS.gene009772.t1 AT2G47490 31.638 177 101 7 50 211 129 300 1.53e-11 64.7
MS.gene009772.t1 AT1G72820 27.986 293 171 7 51 307 44 332 3.70e-25 103
MS.gene009772.t1 AT1G72820 27.986 293 171 7 51 307 44 332 3.70e-25 103
MS.gene009772.t1 AT4G01100 28.231 294 184 8 47 313 1 294 1.78e-24 101
MS.gene009772.t1 AT4G01100 28.205 195 114 4 40 208 97 291 4.25e-18 83.6
MS.gene009772.t1 AT4G01100 25.683 183 127 3 142 317 2 182 3.23e-14 72.4
MS.gene009772.t1 AT1G25380 28.159 277 179 6 54 315 37 308 6.30e-23 98.2
MS.gene009772.t1 AT1G25380 29.167 192 115 7 50 223 133 321 1.70e-11 65.1
MS.gene009772.t1 AT1G25380 28.159 277 179 6 54 315 37 308 6.30e-23 98.2
MS.gene009772.t1 AT1G25380 29.167 192 115 7 50 223 133 321 1.70e-11 65.1
MS.gene009772.t1 AT5G61810 24.458 323 203 7 17 310 19 329 6.51e-23 97.8
MS.gene009772.t1 AT5G61810 25.140 179 127 4 38 211 156 332 4.75e-13 69.3
MS.gene009772.t1 AT5G51050 25.301 332 202 7 17 314 177 496 9.59e-23 99.0
MS.gene009772.t1 AT5G51050 28.218 202 133 4 121 319 215 407 1.80e-13 71.2
MS.gene009772.t1 AT2G17270 26.148 283 180 7 39 310 23 287 1.95e-22 95.9
MS.gene009772.t1 AT5G61810 24.383 324 204 7 17 311 162 473 2.38e-22 97.4
MS.gene009772.t1 AT5G61810 25.140 179 127 4 38 211 299 475 7.64e-13 69.3
MS.gene009772.t1 AT1G79900 30.962 239 149 6 53 287 31 257 3.32e-22 95.1
MS.gene009772.t1 AT1G79900 30.653 199 118 5 25 216 103 288 7.47e-20 88.6
MS.gene009772.t1 AT3G53940 27.797 295 187 8 38 313 73 360 4.64e-22 95.9
MS.gene009772.t1 AT3G53940 31.892 185 117 4 38 214 180 363 2.20e-20 90.9
MS.gene009772.t1 AT3G53940 29.697 165 108 2 166 326 114 274 7.23e-14 72.0
MS.gene009772.t1 AT5G01500 28.090 267 172 7 54 313 135 388 5.59e-21 93.2
MS.gene009772.t1 AT2G35800 26.962 293 195 7 24 314 531 806 7.70e-21 94.0
MS.gene009772.t1 AT1G14560 26.207 290 180 7 51 314 40 321 2.21e-20 90.5
MS.gene009772.t1 AT1G14560 23.590 195 125 2 38 208 123 317 4.18e-14 72.4
MS.gene009772.t1 AT5G46800 29.412 306 174 11 35 311 5 297 3.47e-20 89.4
MS.gene009772.t1 AT5G46800 29.412 306 174 11 35 311 5 297 3.47e-20 89.4
MS.gene009772.t1 AT5G46800 29.412 306 174 11 35 311 5 297 3.47e-20 89.4
MS.gene009772.t1 AT3G20240 23.684 304 198 7 39 319 53 345 4.29e-20 90.1
MS.gene009772.t1 AT3G51870 25.368 272 185 5 54 319 107 366 2.10e-19 88.2
MS.gene009772.t1 AT3G51870 22.283 184 131 3 30 209 183 358 4.76e-12 66.6
MS.gene009772.t1 AT4G26180 25.839 298 184 10 38 310 21 306 8.44e-19 85.9
MS.gene009772.t1 AT5G07320 26.667 270 180 8 47 311 218 474 8.75e-19 87.0
MS.gene009772.t1 AT5G07320 24.719 178 129 2 38 211 300 476 1.94e-12 68.2
MS.gene009772.t1 AT5G66380 24.272 309 205 10 35 321 7 308 2.67e-18 84.3
MS.gene009772.t1 AT4G24570 26.250 320 177 9 39 316 11 313 2.67e-18 84.3
MS.gene009772.t1 AT5G01340 25.532 282 185 8 39 304 18 290 3.22e-18 84.0
MS.gene009772.t1 AT5G14040 25.796 314 202 8 15 312 55 353 1.51e-17 82.8
MS.gene009772.t1 AT5G09470 25.887 282 181 6 54 315 61 334 1.81e-17 82.4
MS.gene009772.t1 AT2G26360 25.448 279 186 6 33 307 110 370 2.05e-17 82.8
MS.gene009772.t1 AT1G14560 26.236 263 160 7 51 287 40 294 1.62e-16 79.3
MS.gene009772.t1 AT1G14560 31.250 176 106 4 148 310 43 216 4.10e-12 66.2
MS.gene009772.t1 AT1G14560 23.392 171 107 2 38 184 123 293 9.37e-11 62.4
MS.gene009772.t1 AT4G26180 25.818 275 167 10 38 287 21 283 1.65e-16 79.0
MS.gene009772.t1 AT4G26180 26.738 187 123 4 135 310 25 208 7.26e-11 62.4
MS.gene009772.t1 AT3G48850 23.944 284 189 5 39 310 72 340 5.65e-16 78.2
MS.gene009772.t1 AT5G48970 24.611 321 191 10 40 318 24 335 7.98e-16 77.4
MS.gene009772.t1 AT5G48970 24.887 221 143 4 123 325 13 228 2.20e-13 70.5
MS.gene009772.t1 AT2G22500 24.516 310 195 8 39 317 11 312 1.16e-15 76.6
MS.gene009772.t1 AT3G21390 23.344 317 195 9 40 314 21 331 2.66e-15 75.9
MS.gene009772.t1 AT3G21390 25.352 213 138 4 123 319 10 217 3.72e-12 66.6
MS.gene009772.t1 AT3G21390 23.344 317 195 9 40 314 43 353 4.77e-15 75.5
MS.gene009772.t1 AT3G21390 25.352 213 138 4 123 319 32 239 4.87e-12 66.6
MS.gene009772.t1 AT1G14560 23.590 195 125 2 38 208 25 219 9.14e-15 73.2
MS.gene009772.t1 AT3G55640 30.519 154 99 3 166 315 79 228 1.91e-14 72.4
MS.gene009772.t1 AT3G55640 30.519 154 99 3 166 315 79 228 1.91e-14 72.4
MS.gene009772.t1 AT5G48970 25.461 271 164 8 77 318 3 264 3.27e-14 72.0
MS.gene009772.t1 AT4G03115 26.383 235 158 6 25 255 29 252 3.56e-14 72.4
MS.gene009772.t1 AT3G53940 29.697 165 108 2 166 326 114 274 4.33e-14 72.0
MS.gene009772.t1 AT3G53940 36.937 111 67 3 38 146 180 289 9.92e-11 62.0
MS.gene009772.t1 AT4G03115 26.383 235 158 6 25 255 61 284 4.85e-14 72.4
MS.gene009772.t1 AT3G54110 24.000 300 193 9 42 320 19 304 5.65e-14 72.0
MS.gene009772.t1 AT3G54110 25.683 183 130 2 38 214 118 300 4.61e-12 66.2
MS.gene009772.t1 AT2G33820 24.832 298 193 9 27 301 7 296 1.56e-13 70.5
MS.gene009772.t1 AT4G27940 27.607 163 92 3 163 307 146 300 8.25e-13 68.9
MS.gene009772.t1 AT4G03115 28.000 175 120 3 82 255 12 181 1.91e-12 66.6
MS.gene009772.t1 AT4G03115 28.000 175 120 3 82 255 20 189 2.08e-12 66.6
MS.gene009772.t1 AT5G58970 24.503 302 195 11 32 313 10 298 3.39e-12 66.6
MS.gene009772.t1 AT1G14140 24.483 290 188 10 38 307 16 294 5.68e-12 65.9
MS.gene009772.t1 AT5G56450 25.275 182 127 4 39 212 146 326 6.50e-12 65.9
MS.gene009772.t1 AT2G33820 24.183 306 193 10 27 301 7 304 4.91e-11 63.2

Find 86 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTGGCAATTCATGATTTC+TGG 0.161056 5.3:-57780633 MS.gene009772:CDS
GTGAAATCGGGTCGGTAATC+TGG 0.205138 5.3:+57780699 None:intergenic
CTGACGGAAACGGATTTAAT+TGG 0.211854 5.3:+57780528 None:intergenic
CTTTCTGCTCGTTGTAATCT+TGG 0.231051 5.3:+57776571 None:intergenic
GTTGAGTAATAGTGGTTATA+AGG 0.239383 5.3:-57780262 MS.gene009772:CDS
ATGATTTCTGGCTCCATTGC+TGG 0.282177 5.3:-57780621 MS.gene009772:CDS
GCGAAATGCACAGCAGTAAA+AGG 0.303287 5.3:+57780150 None:intergenic
CTCGTTGTAATCTTGGAAAA+AGG 0.310351 5.3:+57776578 None:intergenic
TACAACGAGCAGAAAGATTC+TGG 0.317286 5.3:-57776564 MS.gene009772:CDS
CGGCGTTAAGTTTGTGAAAT+CGG 0.318663 5.3:+57780686 None:intergenic
GGTATCGGCGCAATGGGCCT+TGG 0.320857 5.3:-57780453 MS.gene009772:CDS
GCTACTGCCGGGGCGGCTGC+TGG 0.323395 5.3:-57780051 MS.gene009772:CDS
TGTTAAAACAATAGTGAAAA+AGG 0.326887 5.3:-57776697 MS.gene009772:CDS
AATGGGCCTTGGCGCCGGTC+CGG 0.341444 5.3:-57780442 MS.gene009772:CDS
TGCGCCGATACCGCGGTATA+AGG 0.353836 5.3:+57780464 None:intergenic
GGCGCAATGGGCCTTGGCGC+CGG 0.356819 5.3:-57780447 MS.gene009772:CDS
CTCCCGCAGCCGCTATCTGC+TGG 0.375742 5.3:-57776623 MS.gene009772:CDS
CTGCCGGGGCGGCTGCTGGT+GGG 0.377867 5.3:-57780047 MS.gene009772:CDS
AGTGTTTACGCCGATGGATA+TGG 0.393475 5.3:-57780301 MS.gene009772:CDS
ACTGCCGGGGCGGCTGCTGG+TGG 0.398253 5.3:-57780048 MS.gene009772:CDS
CGGGGCGGCTGCTGGTGGGT+TGG 0.405879 5.3:-57780043 MS.gene009772:CDS
GTATAAGGCGGACGGGCCTT+CGG 0.413742 5.3:+57780479 None:intergenic
CTCTCATCATCAACACTCTC+TGG 0.417304 5.3:+57780087 None:intergenic
GGCGTTAAGTTTGTGAAATC+GGG 0.424412 5.3:+57780687 None:intergenic
TGGTCTTGCTTCTGTGGCCA+TGG 0.426604 5.3:+57780734 None:intergenic
TTGATTGTTCATGCTACTGC+CGG 0.428369 5.3:-57780063 MS.gene009772:CDS
CAACCCACCAGCAGCCGCCC+CGG 0.433417 5.3:+57780044 None:intergenic
AAACTTTGGTCTTGCTTCTG+TGG 0.445074 5.3:+57780728 None:intergenic
TACCGCGGTATCGGCGCAAT+GGG 0.459673 5.3:-57780459 MS.gene009772:CDS
CGTGGGCCGGACCGGCGCCA+AGG 0.462222 5.3:+57780436 None:intergenic
TGAAATCGGGTCGGTAATCT+GGG 0.463068 5.3:+57780700 None:intergenic
TCGTGAGTTGACGGCGGCGC+CGG 0.465043 5.3:+57780666 None:intergenic
ATAAACAGCGTGGGCCGGAC+CGG 0.468252 5.3:+57780428 None:intergenic
TTGAGTAATAGTGGTTATAA+GGG 0.471100 5.3:-57780261 MS.gene009772:CDS
CTCACGACGGTCTTCACTAC+TGG 0.471340 5.3:-57780650 MS.gene009772:CDS
AGGTTGCAGTTGAGTAATAG+TGG 0.471563 5.3:-57780270 MS.gene009772:CDS
GGAGCATGAAAGAGCATCCT+TGG 0.472086 5.3:+57776642 None:intergenic
TCATGCGAGGGTGGGTTCCA+AGG 0.475084 5.3:-57776659 MS.gene009772:CDS
AAGAGCTTGACTGACGGAAA+CGG 0.478473 5.3:+57780518 None:intergenic
TGATTGTTCATGCTACTGCC+GGG 0.479934 5.3:-57780062 MS.gene009772:CDS
TGCTGGTCTACATATGAAGC+TGG 0.491218 5.3:-57776606 MS.gene009772:CDS
TCCGCCTTATACCGCGGTAT+CGG 0.492129 5.3:-57780468 MS.gene009772:CDS
TTTCCGTCAGTCAAGCTCTT+CGG 0.494358 5.3:-57780515 MS.gene009772:CDS
TGTGTTTGATTGTGTGAAGA+GGG 0.507367 5.3:-57780238 MS.gene009772:CDS
GACCAGCAGATAGCGGCTGC+GGG 0.507968 5.3:+57776621 None:intergenic
ACTTATGAAGCTGCGAAAAG+AGG 0.510074 5.3:-57780126 MS.gene009772:CDS
AGACCAGCAGATAGCGGCTG+CGG 0.512887 5.3:+57776620 None:intergenic
CTTATGAAGCTGCGAAAAGA+GGG 0.516796 5.3:-57780125 MS.gene009772:CDS
TAAAACTCAATTGCAATGCC+AGG 0.525231 5.3:-57779989 MS.gene009772:intron
ACAAAGGGCTCATGCGAGGG+TGG 0.536925 5.3:-57776668 MS.gene009772:CDS
GAGAAATAAACAGCGTGGGC+CGG 0.537692 5.3:+57780423 None:intergenic
AGGTTCAAAAGTGGTTCCAT+TGG 0.544925 5.3:-57776726 MS.gene009772:CDS
CTCTGTTTCACCATATCCAT+CGG 0.552176 5.3:+57780291 None:intergenic
TTCATGGTGCAGGGTGTGTG+TGG 0.554065 5.3:-57776756 MS.gene009772:intron
TGACGCAGTGTTTACGCCGA+TGG 0.559443 5.3:-57780307 MS.gene009772:CDS
TGAAGACCGTCGTGAGTTGA+CGG 0.559910 5.3:+57780657 None:intergenic
TTTAATTGGACAAGATGTGA+TGG 0.562571 5.3:+57780542 None:intergenic
ATACCGCGGTATCGGCGCAA+TGG 0.570095 5.3:-57780460 MS.gene009772:CDS
AGGGTGTGTGTGGATGTGAT+AGG 0.574367 5.3:-57776746 MS.gene009772:CDS
GGCCCATTGCGCCGATACCG+CGG 0.581793 5.3:+57780457 None:intergenic
CGGTCAATCTTAAAATCCGA+AGG 0.591376 5.3:-57780495 MS.gene009772:CDS
TACCGCGGTATAAGGCGGAC+GGG 0.595175 5.3:+57780472 None:intergenic
GTGTTCGATACAACCAGCAA+TGG 0.597777 5.3:+57780608 None:intergenic
TGCTGGTTGTATCGAACACA+TGG 0.602280 5.3:-57780604 MS.gene009772:CDS
AACTGAGAAATAAACAGCGT+GGG 0.604326 5.3:+57780419 None:intergenic
CAAAGGGCTCATGCGAGGGT+GGG 0.612108 5.3:-57776667 MS.gene009772:CDS
CGATTTCACAAACTTAACGC+CGG 0.614198 5.3:-57780685 MS.gene009772:CDS
GGCCCGTCCGCCTTATACCG+CGG 0.614223 5.3:-57780474 MS.gene009772:CDS
GTGTGTTTGATTGTGTGAAG+AGG 0.618565 5.3:-57780239 MS.gene009772:CDS
TGGTTCGGGTGTTTGTGCGA+CGG 0.622075 5.3:-57780337 MS.gene009772:CDS
GGATACAAAGGGCTCATGCG+AGG 0.624051 5.3:-57776672 MS.gene009772:CDS
GATTGTTCATGCTACTGCCG+GGG 0.628010 5.3:-57780061 MS.gene009772:CDS
TGACCGAAGAGCTTGACTGA+CGG 0.634127 5.3:+57780512 None:intergenic
GATACAAAGGGCTCATGCGA+GGG 0.636199 5.3:-57776671 MS.gene009772:CDS
ATACCGCGGTATAAGGCGGA+CGG 0.638059 5.3:+57780471 None:intergenic
GCCGATACCGCGGTATAAGG+CGG 0.649019 5.3:+57780467 None:intergenic
TGTTCATGCTACTGCCGGGG+CGG 0.649622 5.3:-57780058 MS.gene009772:CDS
CAGAGAGTGTTGATGATGAG+AGG 0.663254 5.3:-57780086 MS.gene009772:CDS
TTCGGGTGTTTGTGCGACGG+TGG 0.664905 5.3:-57780334 MS.gene009772:CDS
TTAAGTTTGTGAAATCGGGT+CGG 0.668350 5.3:+57780691 None:intergenic
ATATGTAGACCAGCAGATAG+CGG 0.675850 5.3:+57776614 None:intergenic
GGATGTGATAGGTTCAAAAG+TGG 0.680142 5.3:-57776735 MS.gene009772:CDS
AAACTGAGAAATAAACAGCG+TGG 0.696014 5.3:+57780418 None:intergenic
CGATGGATATGGTGAAACAG+AGG 0.697564 5.3:-57780290 MS.gene009772:CDS
AGACCGTCGTGAGTTGACGG+CGG 0.717166 5.3:+57780660 None:intergenic
GCGCCGCCGTCAACTCACGA+CGG 0.745640 5.3:-57780663 MS.gene009772:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAGGTTTTAAATCTAATT+AGG - chr5.3:57780155-57780174 MS.gene009772:CDS 15.0%
!!! AATTATTTTTTGTTCTGTTT+TGG + chr5.3:57780060-57780079 None:intergenic 15.0%
!!! ATTTCTTTTAGGTTATTTTT+AGG + chr5.3:57777898-57777917 None:intergenic 15.0%
!!! GATTATTTGTTATTTTTTGT+TGG - chr5.3:57780177-57780196 MS.gene009772:CDS 15.0%
!!! TTCTTTTCTTTATTTCTTTT+AGG + chr5.3:57777909-57777928 None:intergenic 15.0%
!!! TTTCTTTTAGGTTATTTTTA+GGG + chr5.3:57777897-57777916 None:intergenic 15.0%
!! AAAGAATGATTGTAAATGAA+GGG - chr5.3:57780438-57780457 MS.gene009772:CDS 20.0%
!! AAATTGTTTACTACTCAAAT+AGG - chr5.3:57779890-57779909 MS.gene009772:intron 20.0%
!! AATTCATAATATATGTTGAG+GGG - chr5.3:57778893-57778912 MS.gene009772:intron 20.0%
!! ATTAGGTTAAATTACACATT+TGG + chr5.3:57780119-57780138 None:intergenic 20.0%
!! GAATTCATAATATATGTTGA+GGG - chr5.3:57778892-57778911 MS.gene009772:intron 20.0%
!! TAAAGAATGATTGTAAATGA+AGG - chr5.3:57780437-57780456 MS.gene009772:CDS 20.0%
!! TCAAAAATCGTAAAACTTTA+TGG - chr5.3:57779725-57779744 MS.gene009772:intron 20.0%
!! TGATTCATTATAAGATGTTA+TGG - chr5.3:57778647-57778666 MS.gene009772:intron 20.0%
!! TGTTAAAACAATAGTGAAAA+AGG - chr5.3:57780586-57780605 MS.gene009772:CDS 20.0%
!!! AAAGTTTTACGATTTTTGAT+AGG + chr5.3:57779724-57779743 None:intergenic 20.0%
!!! AAGATTTTTGTTATTCTTGT+TGG - chr5.3:57778714-57778733 MS.gene009772:intron 20.0%
!!! ACAAAAATCTTTTTCAACTT+AGG + chr5.3:57778705-57778724 None:intergenic 20.0%
!!! ACTCAAGATGTTATTTTATT+TGG - chr5.3:57780330-57780349 MS.gene009772:CDS 20.0%
!!! ACTTTTATTATACGAATGTT+TGG - chr5.3:57780370-57780389 MS.gene009772:CDS 20.0%
!!! ATGTGAGAATTTCTTTTTAA+GGG + chr5.3:57776897-57776916 None:intergenic 20.0%
!!! TAAATTTTAAACCGTTTCTA+GGG + chr5.3:57778184-57778203 None:intergenic 20.0%
!!! TAGAAACGGTTTAAAATTTA+GGG - chr5.3:57778184-57778203 MS.gene009772:intron 20.0%
!!! TATTCCCTATCTATTTTATA+GGG - chr5.3:57778853-57778872 MS.gene009772:intron 20.0%
!!! TATTTTTCAGTACTATTTAC+AGG - chr5.3:57779948-57779967 MS.gene009772:intron 20.0%
!!! TTGTGGAATGAAATTTTTTT+GGG - chr5.3:57778059-57778078 MS.gene009772:intron 20.0%
! AAAACAATAGTGAAAAAGGA+CGG - chr5.3:57780590-57780609 MS.gene009772:CDS 25.0%
! AAAAGCCCTATAAAATAGAT+AGG + chr5.3:57778861-57778880 None:intergenic 25.0%
! AAAGCCCTATAAAATAGATA+GGG + chr5.3:57778860-57778879 None:intergenic 25.0%
! AAGAATGATTGTAAATGAAG+GGG - chr5.3:57780439-57780458 MS.gene009772:CDS 25.0%
! AATTGACATAATAATGAAGC+TGG - chr5.3:57779150-57779169 MS.gene009772:intron 25.0%
! ACATATAAAATTGACACCAT+TGG + chr5.3:57778830-57778849 None:intergenic 25.0%
! ATATTGTTTGATATGGTCTA+TGG - chr5.3:57780272-57780291 MS.gene009772:CDS 25.0%
! CTTAAAAAGAAATTCTCACA+TGG - chr5.3:57776896-57776915 MS.gene009772:intron 25.0%
! CTTCATATGCTAAACTTTAA+AGG + chr5.3:57777435-57777454 None:intergenic 25.0%
! GAAACCACAAAATTAGTTAA+GGG - chr5.3:57780092-57780111 MS.gene009772:CDS 25.0%
! GGAATTCATAATATATGTTG+AGG - chr5.3:57778891-57778910 MS.gene009772:intron 25.0%
! TCAAATTACACTACACTATA+GGG + chr5.3:57777558-57777577 None:intergenic 25.0%
! TCGTTTGATCAGAAAATATT+AGG + chr5.3:57780136-57780155 None:intergenic 25.0%
! TGAAACCACAAAATTAGTTA+AGG - chr5.3:57780091-57780110 MS.gene009772:CDS 25.0%
! TGAAGCAAATGATATTAGTA+GGG - chr5.3:57778506-57778525 MS.gene009772:intron 25.0%
! TGTTGTCATATTGTTTGATA+TGG - chr5.3:57780265-57780284 MS.gene009772:CDS 25.0%
! TTCAAATTACACTACACTAT+AGG + chr5.3:57777559-57777578 None:intergenic 25.0%
! TTGAGTAATAGTGGTTATAA+GGG - chr5.3:57777022-57777041 MS.gene009772:intron 25.0%
! TTTACATATATGTATGCCAT+TGG - chr5.3:57779979-57779998 MS.gene009772:intron 25.0%
!! ATGTGCTCTTTTAATGAATT+TGG - chr5.3:57777464-57777483 MS.gene009772:intron 25.0%
!! CATGTGAGAATTTCTTTTTA+AGG + chr5.3:57776898-57776917 None:intergenic 25.0%
!! CTAAATTTTAAACCGTTTCT+AGG + chr5.3:57778185-57778204 None:intergenic 25.0%
!! CTAGAAACGGTTTAAAATTT+AGG - chr5.3:57778183-57778202 MS.gene009772:intron 25.0%
!! CTATTCCCTATCTATTTTAT+AGG - chr5.3:57778852-57778871 MS.gene009772:intron 25.0%
!! TAACAATTATTTTCAGACAG+TGG + chr5.3:57780244-57780263 None:intergenic 25.0%
!! TATTTTCTGATCAAACGAAA+AGG - chr5.3:57780138-57780157 MS.gene009772:CDS 25.0%
!! TGTGCTCTTTTAATGAATTT+GGG - chr5.3:57777465-57777484 MS.gene009772:intron 25.0%
!!! AAATCTTTTTCAACTTAGGA+TGG + chr5.3:57778701-57778720 None:intergenic 25.0%
!!! AATGGTTTTGAAAAATTAGG+GGG - chr5.3:57778759-57778778 MS.gene009772:intron 25.0%
!!! AATTTTGTTGTTTGAACCAA+TGG - chr5.3:57778811-57778830 MS.gene009772:intron 25.0%
!!! ACAGAATTGTTGATTTTTGT+CGG - chr5.3:57780005-57780024 MS.gene009772:CDS 25.0%
!!! ATAGGGCTTTTTTGTTAAAT+TGG - chr5.3:57778870-57778889 MS.gene009772:intron 25.0%
!!! GAATGGTTTTGAAAAATTAG+GGG - chr5.3:57778758-57778777 MS.gene009772:intron 25.0%
!!! GGAATGGTTTTGAAAAATTA+GGG - chr5.3:57778757-57778776 MS.gene009772:intron 25.0%
!!! GGTGGAATATATTTTTTCTT+AGG + chr5.3:57779214-57779233 None:intergenic 25.0%
!!! GTTGTGGAATGAAATTTTTT+TGG - chr5.3:57778058-57778077 MS.gene009772:intron 25.0%
!!! TATTTTTTGTTGGAGCATTA+TGG - chr5.3:57780187-57780206 MS.gene009772:CDS 25.0%
!!! TTGCTATTTGACAATATCAT+AGG + chr5.3:57777594-57777613 None:intergenic 25.0%
AACTTATCAAGGAAAATGCA+TGG - chr5.3:57779661-57779680 MS.gene009772:intron 30.0%
ACCAACTAAAGTAAAGTTAG+GGG - chr5.3:57780033-57780052 MS.gene009772:CDS 30.0%
AGAGAGAGAGAAATAAATAC+AGG - chr5.3:57779845-57779864 MS.gene009772:intron 30.0%
CAAATTACACTACACTATAG+GGG + chr5.3:57777557-57777576 None:intergenic 30.0%
GACCAACTAAAGTAAAGTTA+GGG - chr5.3:57780032-57780051 MS.gene009772:CDS 30.0%
GAGAGAGAGAAATAAATACA+GGG - chr5.3:57779846-57779865 MS.gene009772:intron 30.0%
GAGATAAGAAAGAATCAAGT+GGG + chr5.3:57779295-57779314 None:intergenic 30.0%
GGGTATTACAAATATAAGGT+TGG - chr5.3:57778541-57778560 MS.gene009772:intron 30.0%
GTGAAGCAAATGATATTAGT+AGG - chr5.3:57778505-57778524 MS.gene009772:intron 30.0%
GTTGAGTAATAGTGGTTATA+AGG - chr5.3:57777021-57777040 MS.gene009772:intron 30.0%
TAAGACATCTGCTTTGATTA+AGG + chr5.3:57777652-57777671 None:intergenic 30.0%
TCAAACTATTACGAGAGATT+TGG - chr5.3:57778597-57778616 MS.gene009772:intron 30.0%
TCAACAATTCTGTTAACCAA+TGG + chr5.3:57779998-57780017 None:intergenic 30.0%
TCTTATCTCATACAAGAAGT+TGG - chr5.3:57779306-57779325 MS.gene009772:intron 30.0%
TGACCAACTAAAGTAAAGTT+AGG - chr5.3:57780031-57780050 MS.gene009772:CDS 30.0%
TGAGATAAGAAAGAATCAAG+TGG + chr5.3:57779296-57779315 None:intergenic 30.0%
TGATCTTAACATTGGATTCA+TGG - chr5.3:57780511-57780530 MS.gene009772:CDS 30.0%
TGGAGAATTGATCTTAACAT+TGG - chr5.3:57780503-57780522 MS.gene009772:CDS 30.0%
TTGGATAGTTGTAGAGTTAT+GGG - chr5.3:57778560-57778579 MS.gene009772:intron 30.0%
TTTAATTGGACAAGATGTGA+TGG + chr5.3:57776744-57776763 None:intergenic 30.0%
! CTATCTAAACTAGTACTGAA+AGG + chr5.3:57779784-57779803 None:intergenic 30.0%
! GATATTAGTAGGGCTTTAAT+TGG - chr5.3:57778516-57778535 MS.gene009772:intron 30.0%
! GGTAGGGTATTACAAATATA+AGG - chr5.3:57778537-57778556 MS.gene009772:intron 30.0%
! TGCATTTTCCTTGATAAGTT+TGG + chr5.3:57779661-57779680 None:intergenic 30.0%
!! GTGCTTTTTATGCTAGTTAT+AGG - chr5.3:57777089-57777108 MS.gene009772:intron 30.0%
!! TGAGTTTTAACAACATCAAG+CGG + chr5.3:57777283-57777302 None:intergenic 30.0%
!!! GGGAATGGTTTTGAAAAATT+AGG - chr5.3:57778756-57778775 MS.gene009772:intron 30.0%
!!! TAATCTGGGTTTTGAAACTT+TGG + chr5.3:57776572-57776591 None:intergenic 30.0%
AAACTCTTTGTGCTTATGTG+GGG - chr5.3:57778449-57778468 MS.gene009772:intron 35.0%
AAACTGAGAAATAAACAGCG+TGG + chr5.3:57776868-57776887 None:intergenic 35.0%
AAAGAAGAACCTTTGACTGA+TGG - chr5.3:57777995-57778014 MS.gene009772:intron 35.0%
AACTGAGAAATAAACAGCGT+GGG + chr5.3:57776867-57776886 None:intergenic 35.0%
AGAAAGAATCAAGTGGGAAA+AGG + chr5.3:57779289-57779308 None:intergenic 35.0%
AGTTACTAAACTGTGAGAAG+AGG - chr5.3:57778122-57778141 MS.gene009772:intron 35.0%
ATACGAATGTTTGGTATCCT+TGG - chr5.3:57780379-57780398 MS.gene009772:CDS 35.0%
ATAGTTGTAGAGTTATGGGT+TGG - chr5.3:57778564-57778583 MS.gene009772:intron 35.0%
ATTGTTGTCATAGCTATACC+TGG + chr5.3:57777315-57777334 None:intergenic 35.0%
ATTTCTCTCTCTCTCATAAC+TGG + chr5.3:57779839-57779858 None:intergenic 35.0%
CAAACTCTTTGTGCTTATGT+GGG - chr5.3:57778448-57778467 MS.gene009772:intron 35.0%
CATAATATATGTTGAGGGGA+TGG - chr5.3:57778897-57778916 MS.gene009772:intron 35.0%
CCAACAAAAAGAATGAGAGT+GGG - chr5.3:57779353-57779372 MS.gene009772:intron 35.0%
CTCGTTGTAATCTTGGAAAA+AGG + chr5.3:57780708-57780727 None:intergenic 35.0%
CTGTTCTCTTTCTCTGTTAT+TGG + chr5.3:57777703-57777722 None:intergenic 35.0%
CTTTCTCTGTTATTGGCATT+GGG + chr5.3:57777696-57777715 None:intergenic 35.0%
GAGAGAATCCAAACTTATCA+AGG - chr5.3:57779650-57779669 MS.gene009772:intron 35.0%
GTTACTAAACTGTGAGAAGA+GGG - chr5.3:57778123-57778142 MS.gene009772:intron 35.0%
GTTGGATAGTTGTAGAGTTA+TGG - chr5.3:57778559-57778578 MS.gene009772:intron 35.0%
TAAAACTCAATTGCAATGCC+AGG - chr5.3:57777294-57777313 MS.gene009772:intron 35.0%
TACGAATGTTTGGTATCCTT+GGG - chr5.3:57780380-57780399 MS.gene009772:CDS 35.0%
TACTGGCAATTCATGATTTC+TGG - chr5.3:57776650-57776669 MS.gene009772:CDS 35.0%
TAGAATCATTGTCAAACCCA+AGG + chr5.3:57780399-57780418 None:intergenic 35.0%
TAGTTAATAGCGCGATATAG+CGG + chr5.3:57778363-57778382 None:intergenic 35.0%
TAGTTGTAGAGTTATGGGTT+GGG - chr5.3:57778565-57778584 MS.gene009772:intron 35.0%
TCCAACAAAAAGAATGAGAG+TGG - chr5.3:57779352-57779371 MS.gene009772:intron 35.0%
TCCCCTAACTTTACTTTAGT+TGG + chr5.3:57780037-57780056 None:intergenic 35.0%
TCTTTCTCTGTTATTGGCAT+TGG + chr5.3:57777697-57777716 None:intergenic 35.0%
TGAAAAAGGACGGATACAAA+GGG - chr5.3:57780600-57780619 MS.gene009772:CDS 35.0%
TGAAAATGACAACCAAACCT+AGG + chr5.3:57778386-57778405 None:intergenic 35.0%
TGATAAGTTTGGATTCTCTC+CGG + chr5.3:57779650-57779669 None:intergenic 35.0%
TGTCAATTCCTATACAGTTC+TGG + chr5.3:57779138-57779157 None:intergenic 35.0%
TGTGTTTGATTGTGTGAAGA+GGG - chr5.3:57777045-57777064 MS.gene009772:intron 35.0%
TTAAGTTTGTGAAATCGGGT+CGG + chr5.3:57776595-57776614 None:intergenic 35.0%
TTCACATTTGAACACAGTAG+TGG - chr5.3:57778220-57778239 MS.gene009772:intron 35.0%
TTGTTGAAATGGTTAGGGAA+TGG - chr5.3:57778741-57778760 MS.gene009772:intron 35.0%
TTTGAGAATGTGAGTTCCAT+AGG - chr5.3:57778425-57778444 MS.gene009772:intron 35.0%
! AAACCGTTTCTAGGGAAATT+TGG + chr5.3:57778176-57778195 None:intergenic 35.0%
! AACCGTTTCTAGGGAAATTT+GGG + chr5.3:57778175-57778194 None:intergenic 35.0%
! AGTGATCATTTTGTTCATGC+TGG - chr5.3:57776926-57776945 MS.gene009772:intron 35.0%
! ATGTTTTCCTCCATCTTGTA+AGG + chr5.3:57779185-57779204 None:intergenic 35.0%
! CTCATTCTTTTTGTTGGAGA+GGG + chr5.3:57779350-57779369 None:intergenic 35.0%
! GTGATTTTATGCGACTGAAT+GGG - chr5.3:57778944-57778963 MS.gene009772:intron 35.0%
! GTGTGTTGTTGAAATGGTTA+GGG - chr5.3:57778736-57778755 MS.gene009772:intron 35.0%
! TAGTAGGGCTTTAATTGGTA+GGG - chr5.3:57778521-57778540 MS.gene009772:intron 35.0%
! TCTCATTCTTTTTGTTGGAG+AGG + chr5.3:57779351-57779370 None:intergenic 35.0%
! TGATTTTATGCGACTGAATG+GGG - chr5.3:57778945-57778964 MS.gene009772:intron 35.0%
! TGGTCCCTTAACTAATTTTG+TGG + chr5.3:57780099-57780118 None:intergenic 35.0%
! TGTGATTTTATGCGACTGAA+TGG - chr5.3:57778943-57778962 MS.gene009772:intron 35.0%
! TTAGTAGGGCTTTAATTGGT+AGG - chr5.3:57778520-57778539 MS.gene009772:intron 35.0%
! TTGTTGGTGTGTTGTTGAAA+TGG - chr5.3:57778730-57778749 MS.gene009772:intron 35.0%
!! ATGGTGTTGTTTGATTCATG+TGG - chr5.3:57780206-57780225 MS.gene009772:CDS 35.0%
!! TCATTTTGTTCATGCTGGTT+CGG - chr5.3:57776931-57776950 MS.gene009772:intron 35.0%
!! TCCTATACAGTTCTGGAATT+AGG + chr5.3:57779131-57779150 None:intergenic 35.0%
!!! AGAGAAGTTTTGTTGTGCAA+TGG - chr5.3:57778021-57778040 MS.gene009772:intron 35.0%
!!! TGTTTTAACAACATCGCCAA+TGG + chr5.3:57780576-57780595 None:intergenic 35.0%
!!! TTTTGGGTTTTGTTTTGCCA+TGG - chr5.3:57778075-57778094 MS.gene009772:intron 35.0%
AAAAGAATGAGAGTGGGAAG+AGG - chr5.3:57779359-57779378 MS.gene009772:intron 40.0%
AAACTGTGAGAAGAGGGAAA+AGG - chr5.3:57778129-57778148 MS.gene009772:intron 40.0%
AAAGAATGAGAGTGGGAAGA+GGG - chr5.3:57779360-57779379 MS.gene009772:intron 40.0%
AACATTGGATTCATGGTGCA+GGG - chr5.3:57780518-57780537 MS.gene009772:CDS 40.0%
AACTGTGAGAAGAGGGAAAA+GGG - chr5.3:57778130-57778149 MS.gene009772:intron 40.0%
AAGAATCAAGTGGGAAAAGG+TGG + chr5.3:57779286-57779305 None:intergenic 40.0%
AAGCACAAAGAGTTTGCCTA+TGG + chr5.3:57778444-57778463 None:intergenic 40.0%
ACTTATGAAGCTGCGAAAAG+AGG - chr5.3:57777157-57777176 MS.gene009772:intron 40.0%
AGGGGATGGCTAAAACTTAA+AGG - chr5.3:57778911-57778930 MS.gene009772:intron 40.0%
AGGTTCAAAAGTGGTTCCAT+TGG - chr5.3:57780557-57780576 MS.gene009772:CDS 40.0%
AGGTTGCAGTTGAGTAATAG+TGG - chr5.3:57777013-57777032 MS.gene009772:intron 40.0%
AGTCGCATAAAATCACACTC+AGG + chr5.3:57778940-57778959 None:intergenic 40.0%
ATATACCACATAAGCGCAGA+AGG + chr5.3:57777491-57777510 None:intergenic 40.0%
ATATGTAGACCAGCAGATAG+CGG + chr5.3:57780672-57780691 None:intergenic 40.0%
CAACATGAAGTTATGGTACC+GGG - chr5.3:57778992-57779011 MS.gene009772:intron 40.0%
CATTCACAAGTCACAAACAC+AGG + chr5.3:57777515-57777534 None:intergenic 40.0%
CCAACATGAAGTTATGGTAC+CGG - chr5.3:57778991-57779010 MS.gene009772:intron 40.0%
CGATTTCACAAACTTAACGC+CGG - chr5.3:57776598-57776617 MS.gene009772:CDS 40.0%
CGCTATTAACTACCTAGGTT+TGG - chr5.3:57778371-57778390 MS.gene009772:intron 40.0%
CGGCGTTAAGTTTGTGAAAT+CGG + chr5.3:57776600-57776619 None:intergenic 40.0%
CGGTACCATAACTTCATGTT+GGG + chr5.3:57778993-57779012 None:intergenic 40.0%
CGGTCAATCTTAAAATCCGA+AGG - chr5.3:57776788-57776807 MS.gene009772:intron 40.0%
CTCCAACGAGAGAAAAGATA+GGG + chr5.3:57780488-57780507 None:intergenic 40.0%
CTCTGTTTCACCATATCCAT+CGG + chr5.3:57776995-57777014 None:intergenic 40.0%
CTTATGAAGCTGCGAAAAGA+GGG - chr5.3:57777158-57777177 MS.gene009772:intron 40.0%
CTTTCTGCTCGTTGTAATCT+TGG + chr5.3:57780715-57780734 None:intergenic 40.0%
GCAAACTCTTTGTGCTTATG+TGG - chr5.3:57778447-57778466 MS.gene009772:intron 40.0%
GCCTAATTCCAGAACTGTAT+AGG - chr5.3:57779127-57779146 MS.gene009772:intron 40.0%
GGATGGCTAAAACTTAAAGG+TGG - chr5.3:57778914-57778933 MS.gene009772:intron 40.0%
GGCGTTAAGTTTGTGAAATC+GGG + chr5.3:57776599-57776618 None:intergenic 40.0%
GGTACCATAACTTCATGTTG+GGG + chr5.3:57778992-57779011 None:intergenic 40.0%
GTGAAAAAGGACGGATACAA+AGG - chr5.3:57780599-57780618 MS.gene009772:CDS 40.0%
GTGTGTTTGATTGTGTGAAG+AGG - chr5.3:57777044-57777063 MS.gene009772:intron 40.0%
TAACATTGGATTCATGGTGC+AGG - chr5.3:57780517-57780536 MS.gene009772:CDS 40.0%
TACAACGAGCAGAAAGATTC+TGG - chr5.3:57780719-57780738 MS.gene009772:CDS 40.0%
TATCGCGCTATTAACTACCT+AGG - chr5.3:57778366-57778385 MS.gene009772:intron 40.0%
TATTGCGAACTTCTCTGCTA+TGG - chr5.3:57778302-57778321 MS.gene009772:intron 40.0%
TCCCCAAATTTCCCTAGAAA+CGG - chr5.3:57778170-57778189 MS.gene009772:intron 40.0%
TCTCCAACGAGAGAAAAGAT+AGG + chr5.3:57780489-57780508 None:intergenic 40.0%
TGGGAAAAGGTGGTTTAATG+TGG + chr5.3:57779276-57779295 None:intergenic 40.0%
TGGTCTATGGTGTTTGATCA+AGG - chr5.3:57780285-57780304 MS.gene009772:CDS 40.0%
TTGATTGTTCATGCTACTGC+CGG - chr5.3:57777220-57777239 MS.gene009772:intron 40.0%
! ACCGTTTCTAGGGAAATTTG+GGG + chr5.3:57778174-57778193 None:intergenic 40.0%
! ATCCCTATCTTTTCTCTCGT+TGG - chr5.3:57780483-57780502 MS.gene009772:CDS 40.0%
! CCCACTCTCATTCTTTTTGT+TGG + chr5.3:57779356-57779375 None:intergenic 40.0%
! CTGACGGAAACGGATTTAAT+TGG + chr5.3:57776758-57776777 None:intergenic 40.0%
! CTGTGTTTGTGACTTGTGAA+TGG - chr5.3:57777513-57777532 MS.gene009772:intron 40.0%
! GGTGTGTTGTTGAAATGGTT+AGG - chr5.3:57778735-57778754 MS.gene009772:intron 40.0%
! TCTGGAATTAGGCAGTAACA+GGG + chr5.3:57779120-57779139 None:intergenic 40.0%
!! AAACTTTGGTCTTGCTTCTG+TGG + chr5.3:57776558-57776577 None:intergenic 40.0%
!! AGGGAAATGAGGAGTTGATA+TGG - chr5.3:57779391-57779410 MS.gene009772:intron 40.0%
!! GGCTTGCATGTGAGTTTTAA+CGG + chr5.3:57776723-57776742 None:intergenic 40.0%
!! GTGAGTTTTAACGGTGTCAA+CGG + chr5.3:57776714-57776733 None:intergenic 40.0%
!! TGAGTTTTAACGGTGTCAAC+GGG + chr5.3:57776713-57776732 None:intergenic 40.0%
!! TTCTGGAATTAGGCAGTAAC+AGG + chr5.3:57779121-57779140 None:intergenic 40.0%
!! TTGGGTGCTGTTATGATGAT+AGG - chr5.3:57779070-57779089 MS.gene009772:intron 40.0%
!!! AAGTTTTGTTGTGCAATGGC+TGG - chr5.3:57778025-57778044 MS.gene009772:intron 40.0%
!!! AGTTTTGTTGTGCAATGGCT+GGG - chr5.3:57778026-57778045 MS.gene009772:intron 40.0%
!!! CATTTTGTTCATGCTGGTTC+GGG - chr5.3:57776932-57776951 MS.gene009772:intron 40.0%
!!! GGATTTTTTGACAACTGCGA+TGG - chr5.3:57779514-57779533 MS.gene009772:intron 40.0%
AAGAGCTTGACTGACGGAAA+CGG + chr5.3:57776768-57776787 None:intergenic 45.0%
AGTGTTTACGCCGATGGATA+TGG - chr5.3:57776982-57777001 MS.gene009772:intron 45.0%
ATGGCCCACGACAAGAATAT+GGG + chr5.3:57779619-57779638 None:intergenic 45.0%
ATTGCAGACTGCAGAGAGTT+TGG - chr5.3:57779051-57779070 MS.gene009772:intron 45.0%
CAGTACTCCTTACAAGATGG+AGG - chr5.3:57779175-57779194 MS.gene009772:intron 45.0%
CCGGTACCATAACTTCATGT+TGG + chr5.3:57778994-57779013 None:intergenic 45.0%
CGATGGATATGGTGAAACAG+AGG - chr5.3:57776993-57777012 MS.gene009772:intron 45.0%
CTAGGGAAATTTGGGGATCT+AGG + chr5.3:57778167-57778186 None:intergenic 45.0%
CTCTCATCATCAACACTCTC+TGG + chr5.3:57777199-57777218 None:intergenic 45.0%
CTGGAATTAGGCAGTAACAG+GGG + chr5.3:57779119-57779138 None:intergenic 45.0%
GAGAAGAGGGAAAAGGGTTA+GGG - chr5.3:57778136-57778155 MS.gene009772:intron 45.0%
GAGCAGTACTCCTTACAAGA+TGG - chr5.3:57779172-57779191 MS.gene009772:intron 45.0%
GATATAGCGGCATATCGAAG+CGG + chr5.3:57778350-57778369 None:intergenic 45.0%
GCGAAATGCACAGCAGTAAA+AGG + chr5.3:57777136-57777155 None:intergenic 45.0%
GGATTTGTGCATTCTGCACT+TGG + chr5.3:57779098-57779117 None:intergenic 45.0%
GTGTTCGATACAACCAGCAA+TGG + chr5.3:57776678-57776697 None:intergenic 45.0%
TGAAATCGGGTCGGTAATCT+GGG + chr5.3:57776586-57776605 None:intergenic 45.0%
TGAGAAGAGGGAAAAGGGTT+AGG - chr5.3:57778135-57778154 MS.gene009772:intron 45.0%
TGATTGTTCATGCTACTGCC+GGG - chr5.3:57777221-57777240 MS.gene009772:intron 45.0%
TTCCCCCATATTCTTGTCGT+GGG - chr5.3:57779612-57779631 MS.gene009772:intron 45.0%
TTCTCTCAGCCATCAGTCAA+AGG + chr5.3:57778007-57778026 None:intergenic 45.0%
TTGCAGACTGCAGAGAGTTT+GGG - chr5.3:57779052-57779071 MS.gene009772:intron 45.0%
TTTCCGTCAGTCAAGCTCTT+CGG - chr5.3:57776768-57776787 MS.gene009772:intron 45.0%
! TGCTGGTCTACATATGAAGC+TGG - chr5.3:57780677-57780696 MS.gene009772:CDS 45.0%
! TGCTGGTTGTATCGAACACA+TGG - chr5.3:57776679-57776698 MS.gene009772:CDS 45.0%
!! ATGATTTCTGGCTCCATTGC+TGG - chr5.3:57776662-57776681 MS.gene009772:CDS 45.0%
!! CAGAGAGTGTTGATGATGAG+AGG - chr5.3:57777197-57777216 MS.gene009772:intron 45.0%
!! CTGTTTGTGCAGCGGATTTT+TGG - chr5.3:57779587-57779606 MS.gene009772:intron 45.0%
!! GAGCGCGAAGTGTTGTTAAA+TGG - chr5.3:57779461-57779480 MS.gene009772:intron 45.0%
!! GTTTTGAGTGAGGAAGGGTT+TGG - chr5.3:57777067-57777086 MS.gene009772:intron 45.0%
!! TAAATGGTGTTGCACCCCTA+TGG - chr5.3:57779477-57779496 MS.gene009772:intron 45.0%
!!! AAGAGGGTTTTGAGTGAGGA+AGG - chr5.3:57777061-57777080 MS.gene009772:intron 45.0%
!!! AGAGGGTTTTGAGTGAGGAA+GGG - chr5.3:57777062-57777081 MS.gene009772:intron 45.0%
!!! GGTTTTGTTTTGCCATGGCT+GGG - chr5.3:57778080-57778099 MS.gene009772:intron 45.0%
!!! TGTGAAGAGGGTTTTGAGTG+AGG - chr5.3:57777057-57777076 MS.gene009772:intron 45.0%
AAACAGAACACTGCGGCCTA+TGG + chr5.3:57779573-57779592 None:intergenic 50.0%
ACCACAGCATTCTGCCATAG+GGG + chr5.3:57779494-57779513 None:intergenic 50.0%
ACCTTGAAGCAGCACAAACC+CGG + chr5.3:57779013-57779032 None:intergenic 50.0%
ATCTGCTCCTTCTCGGTCAA+GGG + chr5.3:57779235-57779254 None:intergenic 50.0%
CACCACAGCATTCTGCCATA+GGG + chr5.3:57779495-57779514 None:intergenic 50.0%
CACGACAAGAATATGGGGGA+AGG + chr5.3:57779613-57779632 None:intergenic 50.0%
CTTCCCCCATATTCTTGTCG+TGG - chr5.3:57779611-57779630 MS.gene009772:intron 50.0%
GAGAAATAAACAGCGTGGGC+CGG + chr5.3:57776863-57776882 None:intergenic 50.0%
GAGAGGGATGCATGTATGAG+AGG + chr5.3:57779334-57779353 None:intergenic 50.0%
GATACAAAGGGCTCATGCGA+GGG - chr5.3:57780612-57780631 MS.gene009772:CDS 50.0%
GATGGCCCACGACAAGAATA+TGG + chr5.3:57779620-57779639 None:intergenic 50.0%
GATTGTTCATGCTACTGCCG+GGG - chr5.3:57777222-57777241 MS.gene009772:intron 50.0%
GCAGTGTTCTGTTTGTGCAG+CGG - chr5.3:57779579-57779598 MS.gene009772:intron 50.0%
GCTGCACAAACAGAACACTG+CGG + chr5.3:57779580-57779599 None:intergenic 50.0%
GGCTGGGAGTGAAAAGACAA+TGG - chr5.3:57778096-57778115 MS.gene009772:intron 50.0%
GGGAGAAGATGAGGGAAATG+AGG - chr5.3:57779380-57779399 MS.gene009772:intron 50.0%
GGGGATCAAAACACAGCCTT+AGG - chr5.3:57778964-57778983 MS.gene009772:intron 50.0%
GGTGCCCCAACATGAAGTTA+TGG - chr5.3:57778985-57779004 MS.gene009772:intron 50.0%
GTGAAATCGGGTCGGTAATC+TGG + chr5.3:57776587-57776606 None:intergenic 50.0%
TATTCCACCCTTGACCGAGA+AGG - chr5.3:57779225-57779244 MS.gene009772:intron 50.0%
TGACCGAAGAGCTTGACTGA+CGG + chr5.3:57776774-57776793 None:intergenic 50.0%
TGGCCCACGACAAGAATATG+GGG + chr5.3:57779618-57779637 None:intergenic 50.0%
TGGGAAGAGGGAGAAGATGA+GGG - chr5.3:57779372-57779391 MS.gene009772:intron 50.0%
TTCGCAATAGCAGCTGCTCA+AGG + chr5.3:57778291-57778310 None:intergenic 50.0%
! ACTTCATGTTGGGGCACCTA+AGG + chr5.3:57778983-57779002 None:intergenic 50.0%
! TGAAGACCGTCGTGAGTTGA+CGG + chr5.3:57776629-57776648 None:intergenic 50.0%
! TGTCTTTTCACTCCCAGCCA+TGG + chr5.3:57778095-57778114 None:intergenic 50.0%
!! ATTCTCTCCGGTGTTGTCGA+TGG + chr5.3:57779638-57779657 None:intergenic 50.0%
!! GGAGCATGAAAGAGCATCCT+TGG + chr5.3:57780644-57780663 None:intergenic 50.0%
!!! GGCTGGGAGAAGTTTTGTTG+TGG - chr5.3:57778042-57778061 MS.gene009772:intron 50.0%
!!! GGGTTTTGTTTTGCCATGGC+TGG - chr5.3:57778079-57778098 MS.gene009772:intron 50.0%
ACCCCTATGGCAGAATGCTG+TGG - chr5.3:57779490-57779509 MS.gene009772:intron 55.0%
AGCACGGATCTGCTCCTTCT+CGG + chr5.3:57779242-57779261 None:intergenic 55.0%
ATACCGCGGTATAAGGCGGA+CGG + chr5.3:57776815-57776834 None:intergenic 55.0%
CCACCACAGCATTCTGCCAT+AGG + chr5.3:57779496-57779515 None:intergenic 55.0%
CCTATGGCAGAATGCTGTGG+TGG - chr5.3:57779493-57779512 MS.gene009772:intron 55.0%
CTCACGACGGTCTTCACTAC+TGG - chr5.3:57776633-57776652 MS.gene009772:CDS 55.0%
GATCTGCTCCTTCTCGGTCA+AGG + chr5.3:57779236-57779255 None:intergenic 55.0%
GCACACTGTCGTGACAAACG+TGG + chr5.3:57778478-57778497 None:intergenic 55.0%
GGATACAAAGGGCTCATGCG+AGG - chr5.3:57780611-57780630 MS.gene009772:CDS 55.0%
GGCCCACGACAAGAATATGG+GGG + chr5.3:57779617-57779636 None:intergenic 55.0%
GGTGGTTTAATGTGGCAGCG+AGG + chr5.3:57779268-57779287 None:intergenic 55.0%
GTGGGAAGAGGGAGAAGATG+AGG - chr5.3:57779371-57779390 MS.gene009772:intron 55.0%
TCCGCCTTATACCGCGGTAT+CGG - chr5.3:57776815-57776834 MS.gene009772:intron 55.0%
TGACGCAGTGTTTACGCCGA+TGG - chr5.3:57776976-57776995 MS.gene009772:intron 55.0%
TGCTATGGCCATTACCAGCG+CGG - chr5.3:57778317-57778336 MS.gene009772:intron 55.0%
TTCATGGTGCAGGGTGTGTG+TGG - chr5.3:57780527-57780546 MS.gene009772:CDS 55.0%
TTGGGCCTTCTGCGCTTATG+TGG - chr5.3:57777483-57777502 MS.gene009772:intron 55.0%
! AAGGTGCTATAGCGCCTCCT+GGG + chr5.3:57778272-57778291 None:intergenic 55.0%
! TGGTTCGGGTGTTTGTGCGA+CGG - chr5.3:57776946-57776965 MS.gene009772:intron 55.0%
!! ACCGGGTTTGTGCTGCTTCA+AGG - chr5.3:57779009-57779028 MS.gene009772:intron 55.0%
!! CTGGGTAGCGGACAGGTTAA+CGG + chr5.3:57778254-57778273 None:intergenic 55.0%
ACAAAGGGCTCATGCGAGGG+TGG - chr5.3:57780615-57780634 MS.gene009772:CDS 60.0%
ATAAACAGCGTGGGCCGGAC+CGG + chr5.3:57776858-57776877 None:intergenic 60.0%
CAAAGGGCTCATGCGAGGGT+GGG - chr5.3:57780616-57780635 MS.gene009772:CDS 60.0%
CGGCATATCGAAGCGGACGT+TGG + chr5.3:57778343-57778362 None:intergenic 60.0%
CGTTAACCTGTCCGCTACCC+AGG - chr5.3:57778252-57778271 MS.gene009772:intron 60.0%
CTATAGCGCCTCCTGGGTAG+CGG + chr5.3:57778266-57778285 None:intergenic 60.0%
GCCGATACCGCGGTATAAGG+CGG + chr5.3:57776819-57776838 None:intergenic 60.0%
GCCTGCCATTGCAGCACCAT+AGG - chr5.3:57779554-57779573 MS.gene009772:intron 60.0%
GTATAAGGCGGACGGGCCTT+CGG + chr5.3:57776807-57776826 None:intergenic 60.0%
TAACCTGTCCGCTACCCAGG+AGG - chr5.3:57778255-57778274 MS.gene009772:intron 60.0%
TACCGCGGTATAAGGCGGAC+GGG + chr5.3:57776814-57776833 None:intergenic 60.0%
TCGTGGGCCATCGACAACAC+CGG - chr5.3:57779628-57779647 MS.gene009772:intron 60.0%
TGCTCCTTCTCGGTCAAGGG+TGG + chr5.3:57779232-57779251 None:intergenic 60.0%
TGTGGCAGCGAGGTTGAGCA+CGG + chr5.3:57779258-57779277 None:intergenic 60.0%
TGTTCATGCTACTGCCGGGG+CGG - chr5.3:57777225-57777244 MS.gene009772:intron 60.0%
TTCGGGTGTTTGTGCGACGG+TGG - chr5.3:57776949-57776968 MS.gene009772:intron 60.0%
! AGACCAGCAGATAGCGGCTG+CGG + chr5.3:57780666-57780685 None:intergenic 60.0%
! AGACCGTCGTGAGTTGACGG+CGG + chr5.3:57776626-57776645 None:intergenic 60.0%
! CAAGGTGCTATAGCGCCTCC+TGG + chr5.3:57778273-57778292 None:intergenic 60.0%
! TCATGCGAGGGTGGGTTCCA+AGG - chr5.3:57780624-57780643 MS.gene009772:CDS 60.0%
! TGCGCCGATACCGCGGTATA+AGG + chr5.3:57776822-57776841 None:intergenic 60.0%
!! ATACCGCGGTATCGGCGCAA+TGG - chr5.3:57776823-57776842 MS.gene009772:intron 60.0%
!! GCCTATGGTGCTGCAATGGC+AGG + chr5.3:57779558-57779577 None:intergenic 60.0%
!! TACCGCGGTATCGGCGCAAT+GGG - chr5.3:57776824-57776843 MS.gene009772:intron 60.0%
!! TGCGGCCTATGGTGCTGCAA+TGG + chr5.3:57779562-57779581 None:intergenic 60.0%
! GACCAGCAGATAGCGGCTGC+GGG + chr5.3:57780665-57780684 None:intergenic 65.0%
! GACGTTGGCCGCGCTGGTAA+TGG + chr5.3:57778328-57778347 None:intergenic 65.0%
!! GGTATCGGCGCAATGGGCCT+TGG - chr5.3:57776830-57776849 MS.gene009772:intron 65.0%
CTCCCGCAGCCGCTATCTGC+TGG - chr5.3:57780660-57780679 MS.gene009772:CDS 70.0%
GCGCCGCCGTCAACTCACGA+CGG - chr5.3:57776620-57776639 MS.gene009772:CDS 70.0%
GGCCCGTCCGCCTTATACCG+CGG - chr5.3:57776809-57776828 MS.gene009772:intron 70.0%
! GGCCCATTGCGCCGATACCG+CGG + chr5.3:57776829-57776848 None:intergenic 70.0%
! TCGTGAGTTGACGGCGGCGC+CGG + chr5.3:57776620-57776639 None:intergenic 70.0%
!! AATGGGCCTTGGCGCCGGTC+CGG - chr5.3:57776841-57776860 MS.gene009772:intron 70.0%
CAACCCACCAGCAGCCGCCC+CGG + chr5.3:57777242-57777261 None:intergenic 75.0%
GAAGCGGACGTTGGCCGCGC+TGG + chr5.3:57778334-57778353 None:intergenic 75.0%
GGCGCAATGGGCCTTGGCGC+CGG - chr5.3:57776836-57776855 MS.gene009772:intron 75.0%
!! GCGCCTCCTGGGTAGCGGAC+AGG + chr5.3:57778261-57778280 None:intergenic 75.0%
! ACTGCCGGGGCGGCTGCTGG+TGG - chr5.3:57777235-57777254 MS.gene009772:intron 80.0%
! CTGCCGGGGCGGCTGCTGGT+GGG - chr5.3:57777236-57777255 MS.gene009772:intron 80.0%
! GCTACTGCCGGGGCGGCTGC+TGG - chr5.3:57777232-57777251 MS.gene009772:intron 80.0%
!! CGGGGCGGCTGCTGGTGGGT+TGG - chr5.3:57777240-57777259 MS.gene009772:intron 80.0%
! CGTGGGCCGGACCGGCGCCA+AGG + chr5.3:57776850-57776869 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 57776551 57780754 57776551 ID=MS.gene009772
chr5.3 mRNA 57776551 57780754 57776551 ID=MS.gene009772.t1;Parent=MS.gene009772
chr5.3 exon 57779990 57780754 57779990 ID=MS.gene009772.t1.exon1;Parent=MS.gene009772.t1
chr5.3 CDS 57779990 57780754 57779990 ID=cds.MS.gene009772.t1;Parent=MS.gene009772.t1
chr5.3 exon 57776551 57776766 57776551 ID=MS.gene009772.t1.exon2;Parent=MS.gene009772.t1
chr5.3 CDS 57776551 57776766 57776551 ID=cds.MS.gene009772.t1;Parent=MS.gene009772.t1
Gene Sequence

>MS.gene009772

ATGGCCACAGAAGCAAGACCAAAGTTTCAAAACCCAGATTACCGACCCGATTTCACAAACTTAACGCCGGCGCCGCCGTCAACTCACGACGGTCTTCACTACTGGCAATTCATGATTTCTGGCTCCATTGCTGGTTGTATCGAACACATGGCAATGTTTCCCGTTGACACCGTTAAAACTCACATGCAAGCCATCACATCTTGTCCAATTAAATCCGTTTCCGTCAGTCAAGCTCTTCGGTCAATCTTAAAATCCGAAGGCCCGTCCGCCTTATACCGCGGTATCGGCGCAATGGGCCTTGGCGCCGGTCCGGCCCACGCTGTTTATTTCTCAGTTTATGAAACCCTTAAAAAGAAATTCTCACATGGAAATGTTAGTGATCATTTTGTTCATGCTGGTTCGGGTGTTTGTGCGACGGTGGCGAGTGACGCAGTGTTTACGCCGATGGATATGGTGAAACAGAGGTTGCAGTTGAGTAATAGTGGTTATAAGGGTGTGTTTGATTGTGTGAAGAGGGTTTTGAGTGAGGAAGGGTTTGGTGCTTTTTATGCTAGTTATAGGACTACTGTTTTGATGAATGCGCCTTTTACTGCTGTGCATTTCGCGACTTATGAAGCTGCGAAAAGAGGGTTGAATGAGATTTCTCCAGAGAGTGTTGATGATGAGAGGTTGATTGTTCATGCTACTGCCGGGGCGGCTGCTGGTGGGTTGGCTGCTGCTGTTACTACGCCGCTTGATGTTGTTAAAACTCAATTGCAATGCCAGGTATAGCTATGACAACAATAGTAGTAATGATAATTTGTTGATTTTGAATTATAGCTATGATAATAATAGTAGTAACGATAATTTGTTGATTTTGAATTGCTTAGCTATAGTACTTGCCTTTAAAGTTTAGCATATGAAGAAATTAACTATGTGCTCTTTTAATGAATTTGGGCCTTCTGCGCTTATGTGGTATATTCCTGTGTTTGTGACTTGTGAATGGAACAATGCTGTTAAATAGCCCCTATAGTGTAGTGTAATTTGAACAATTTGCTAGTCCTATGATATTGTCAAATAGCAACTCTAGCATTAAACATTTATAAATCAAAACTCAAGCCTTAATCAAAGCAGATGTCTTAATCAAAACATTACATTCTATTCCCAATGCCAATAACAGAGAAAGAGAACAGAACAGAGATGACAAATGAAAGAAAATGAAAACAGAATACAAAGAAAGAAAGAGAGATAACGTACAACAAAACAGAGTTGAGAGATGAAAGAAAACATAACAGAACAAAGAAAGAACGCGTAAAAGAGAACATAGAACTGAAAGAAATAACACAAAAGAGAACATAACATAGCCCTAAAAATAACCTAAAAGAAATAAAGAAAAGAACATGTATTACTGAAAGAAAGAAAACGCAAAACAGAACATAAAGAGAAGAGAAATGAGAGAGCGTAGAAAGAAGAACCTTTGACTGATGGCTGAGAGAAGTTTTGTTGTGCAATGGCTGGGAGAAGTTTTGTTGTGGAATGAAATTTTTTTGGGTTTTGTTTTGCCATGGCTGGGAGTGAAAAGACAATGGAACAGTTACTAAACTGTGAGAAGAGGGAAAAGGGTTAGGGATAATCCTAGATCCCCAAATTTCCCTAGAAACGGTTTAAAATTTAGGGTCTATTTGATGTTTTCACATTTGAACACAGTAGTGGATCAGAGACCGTTAACCTGTCCGCTACCCAGGAGGCGCTATAGCACCTTGAGCAGCTGCTATTGCGAACTTCTCTGCTATGGCCATTACCAGCGCGGCCAACGTCCGCTTCGATATGCCGCTATATCGCGCTATTAACTACCTAGGTTTGGTTGTCATTTTCATTGATTATCAAGCTTCTGTTTTGAGAATGTGAGTTCCATAGGCAAACTCTTTGTGCTTATGTGGGGATTCCACGTTTGTCACGACAGTGTGCGAAAAACGTGAAGCAAATGATATTAGTAGGGCTTTAATTGGTAGGGTATTACAAATATAAGGTTGGATAGTTGTAGAGTTATGGGTTGGGTAGTTCAAGTCAAACTATTACGAGAGATTTGGAGTTAAATAGTTTTTTATATTTACATATGATTCATTATAAGATGTTATGGTGTTGTTAGATTTGATCTATGTAGTTGACCATCCTAAGTTGAAAAAGATTTTTGTTATTCTTGTTGGTGTGTTGTTGAAATGGTTAGGGAATGGTTTTGAAAAATTAGGGGGAACAATTTTCTCTTAAGTAGTTTTATTGTAATTTTGTTGTTTGAACCAATGGTGTCAATTTTATATGTAGCTATTCCCTATCTATTTTATAGGGCTTTTTTGTTAAATTGGAATTCATAATATATGTTGAGGGGATGGCTAAAACTTAAAGGTGGCCTGAGTGTGATTTTATGCGACTGAATGGGGATCAAAACACAGCCTTAGGTGCCCCAACATGAAGTTATGGTACCGGGTTTGTGCTGCTTCAAGGTGCAGATATGTTAGATAAGATTGCAGACTGCAGAGAGTTTGGGTGCTGTTATGATGATAGGAACCAAGTGCAGAATGCACAAATCCCCTGTTACTGCCTAATTCCAGAACTGTATAGGAATTGACATAATAATGAAGCTGGAGCAGTACTCCTTACAAGATGGAGGAAAACATATAATGCCTAAGAAAAAATATATTCCACCCTTGACCGAGAAGGAGCAGATCCGTGCTCAACCTCGCTGCCACATTAAACCACCTTTTCCCACTTGATTCTTTCTTATCTCATACAAGAAGTTGGATCCTCTCATACATGCATCCCTCTCCAACAAAAAGAATGAGAGTGGGAAGAGGGAGAAGATGAGGGAAATGAGGAGTTGATATGGTGAGAGAGAAATGAAATGTTGTGCAGTGATGTAGAAATTTTTTGTGAGAGCGCGAAGTGTTGTTAAATGGTGTTGCACCCCTATGGCAGAATGCTGTGGTGGATTTTTTGACAACTGCGATGGTCAGTTTGTGAAATGATGCCTGCCATTGCAGCACCATAGGCCGCAGTGTTCTGTTTGTGCAGCGGATTTTTGGCCTTCCCCCATATTCTTGTCGTGGGCCATCGACAACACCGGAGAGAATCCAAACTTATCAAGGAAAATGCATGGTATATTGTACACACACATGCACACATCAGTTAAATATCCTATCAAAAATCGTAAAACTTTATGGTTGAAAATAATAATTGATTGCTAATAAGTAACACCTTTCAGTACTAGTTTAGATAGAAGCATGATATATCACATATATGATATATATGCCAGTTATGAGAGAGAGAGAAATAAATACAGGGTGATATTATATAATGAACTACAAATTGTTTACTACTCAAATAGGATAATTAACAGACTAGTTGTGAGTAGCATATTATTTATTTTTCAGTACTATTTACAGGCATGAAATTTTACATATATGTATGCCATTGGTTAACAGAATTGTTGATTTTTGTCGGAAATGACCAACTAAAGTAAAGTTAGGGGACCAAAACAGAACAAAAAATAATTGTGCAACTGAGTGAAACCACAAAATTAGTTAAGGGACCAAATGTGTAATTTAACCTAATATTTTCTGATCAAACGAAAAGGTTTTAAATCTAATTAGGATTATTTGTTATTTTTTGTTGGAGCATTATGGTGTTGTTTGATTCATGTGGTTACTAGTCACTCCACTGTCTGAAAATAATTGTTACTGTTGTCATATTGTTTGATATGGTCTATGGTGTTTGATCAAGGTGTTATTTTATTTTATTTTTTGACTCAAGATGTTATTTTATTTGGAACTTGATTGTTCTGCAACTTTTATTATACGAATGTTTGGTATCCTTGGGTTTGACAATGATTCTAAATCTTTTTTAAAAATATTAAAGAATGATTGTAAATGAAGGGGAATTAGACAACAACTTTTTTAATCCCTATCTTTTCTCTCGTTGGAGAATTGATCTTAACATTGGATTCATGGTGCAGGGTGTGTGTGGATGTGATAGGTTCAAAAGTGGTTCCATTGGCGATGTTGTTAAAACAATAGTGAAAAAGGACGGATACAAAGGGCTCATGCGAGGGTGGGTTCCAAGGATGCTCTTTCATGCTCCCGCAGCCGCTATCTGCTGGTCTACATATGAAGCTGGAAAATCCTTTTTCCAAGATTACAACGAGCAGAAAGATTCTGGAACTGTCACCTAA
Protein sequence

>MS.gene009772.t1

MATEARPKFQNPDYRPDFTNLTPAPPSTHDGLHYWQFMISGSIAGCIEHMAMFPVDTVKTHMQAITSCPIKSVSVSQALRSILKSEGPSALYRGIGAMGLGAGPAHAVYFSVYETLKKKFSHGNVSDHFVHAGSGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVFDCVKRVLSEEGFGAFYASYRTTVLMNAPFTAVHFATYEAAKRGLNEISPESVDDERLIVHATAGAAAGGLAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVVKTIVKKDGYKGLMRGWVPRMLFHAPAAAICWSTYEAGKSFFQDYNEQKDSGTVT