AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene041982

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041982.t1 MTR_5g073040 97.859 327 6 1 1 326 1 327 0.0 667
MS.gene041982.t1 MTR_8g092080 31.348 319 189 10 2 315 14 307 1.17e-38 139
MS.gene041982.t1 MTR_8g092080 30.208 192 123 4 30 216 125 310 6.49e-17 80.5
MS.gene041982.t1 MTR_1g097890 31.959 291 170 8 35 322 48 313 1.22e-37 137
MS.gene041982.t1 MTR_8g098240 32.609 276 174 6 40 313 322 587 2.57e-35 135
MS.gene041982.t1 MTR_8g098240 26.131 199 135 3 112 310 302 488 1.02e-12 69.3
MS.gene041982.t1 MTR_6g015860 28.621 290 181 6 24 293 3 286 1.16e-34 129
MS.gene041982.t1 MTR_6g015860 22.727 176 129 4 148 318 33 206 1.95e-11 64.3
MS.gene041982.t1 MTR_3g025800 29.254 335 196 7 23 323 11 338 2.24e-34 129
MS.gene041982.t1 MTR_7g015870 31.071 280 163 8 50 307 37 308 6.34e-34 127
MS.gene041982.t1 MTR_7g015870 26.396 197 134 6 128 319 25 215 5.66e-15 74.7
MS.gene041982.t1 MTR_7g015870 31.071 280 163 8 50 307 33 304 1.11e-33 126
MS.gene041982.t1 MTR_7g015870 25.381 197 136 5 128 319 21 211 8.26e-15 74.3
MS.gene041982.t1 MTR_5g009500 27.937 315 202 6 24 313 24 338 1.20e-32 124
MS.gene041982.t1 MTR_1g012030 28.070 285 183 7 38 313 139 410 1.09e-31 123
MS.gene041982.t1 MTR_3g107510 27.336 289 194 7 38 320 122 400 1.14e-31 122
MS.gene041982.t1 MTR_3g107510 26.108 203 131 7 20 211 199 393 6.91e-12 66.2
MS.gene041982.t1 MTR_6g034515 29.391 279 185 6 49 321 78 350 2.18e-30 118
MS.gene041982.t1 MTR_2g032610 31.023 303 174 11 30 307 21 313 2.03e-29 115
MS.gene041982.t1 MTR_8g027975 27.723 303 192 6 38 313 51 353 2.11e-28 113
MS.gene041982.t1 MTR_8g027975 24.510 204 142 5 117 313 39 237 5.98e-14 72.0
MS.gene041982.t1 MTR_4g114320 27.273 286 193 8 38 318 123 398 9.52e-27 109
MS.gene041982.t1 MTR_7g109135 29.965 287 184 9 40 313 24 306 3.58e-26 106
MS.gene041982.t1 MTR_3g098460 28.155 309 198 10 14 310 181 477 2.12e-25 106
MS.gene041982.t1 MTR_3g098460 29.348 184 120 4 38 212 299 481 1.30e-19 89.7
MS.gene041982.t1 MTR_3g098460 25.758 198 133 5 122 316 198 384 1.27e-12 68.6
MS.gene041982.t1 MTR_8g019480 27.653 311 173 7 52 318 47 349 3.62e-25 103
MS.gene041982.t1 MTR_8g019480 29.688 192 106 6 134 310 41 218 1.72e-12 67.8
MS.gene041982.t1 MTR_7g084400 25.974 308 199 7 17 311 192 483 4.15e-25 105
MS.gene041982.t1 MTR_7g084400 29.050 179 122 2 38 212 309 486 2.81e-19 88.6
MS.gene041982.t1 MTR_7g084400 29.255 188 128 3 134 320 215 398 1.29e-11 65.5
MS.gene041982.t1 MTR_8g096050 28.428 299 190 10 25 311 214 500 9.06e-25 104
MS.gene041982.t1 MTR_8g096050 28.962 183 122 2 38 212 321 503 1.30e-20 92.8
MS.gene041982.t1 MTR_4g119770 25.938 320 189 8 40 317 16 329 3.23e-24 101
MS.gene041982.t1 MTR_4g119770 23.113 212 138 4 28 215 119 329 7.15e-12 65.9
MS.gene041982.t1 MTR_2g436930 26.899 316 185 8 40 315 17 326 1.64e-23 99.0
MS.gene041982.t1 MTR_2g436930 25.238 210 132 4 29 214 119 327 1.47e-12 67.8
MS.gene041982.t1 MTR_2g436930 25.701 214 136 5 129 324 12 220 2.75e-12 67.0
MS.gene041982.t1 MTR_7g109135 28.214 280 191 6 40 313 24 299 2.52e-23 98.2
MS.gene041982.t1 MTR_7g064980 26.000 300 200 5 38 319 25 320 2.76e-23 98.2
MS.gene041982.t1 MTR_1g095780 28.028 289 178 8 39 320 526 791 5.86e-23 100
MS.gene041982.t1 MTR_4g057850 28.975 283 171 10 39 303 23 293 1.27e-22 96.3
MS.gene041982.t1 MTR_1g087840 27.737 274 179 6 54 313 35 303 3.37e-22 95.1
MS.gene041982.t1 MTR_1g087840 28.889 180 112 6 50 216 132 308 8.92e-11 62.4
MS.gene041982.t1 MTR_6g091800 25.667 300 189 7 38 314 19 307 9.75e-22 94.0
MS.gene041982.t1 MTR_8g066975 30.263 304 165 13 38 311 8 294 1.26e-21 93.2
MS.gene041982.t1 MTR_5g081150 27.148 291 188 9 38 310 34 318 3.63e-21 92.4
MS.gene041982.t1 MTR_5g081150 33.537 164 100 3 166 325 75 233 2.22e-14 73.2
MS.gene041982.t1 MTR_5g081150 29.148 223 137 6 8 215 109 325 4.10e-14 72.4
MS.gene041982.t1 MTR_5g055410 26.619 278 177 6 54 313 37 305 1.03e-20 91.7
MS.gene041982.t1 MTR_5g055410 31.111 180 107 7 54 218 135 312 1.32e-11 65.1
MS.gene041982.t1 MTR_7g068340 27.240 279 178 7 54 319 103 369 1.06e-20 92.0
MS.gene041982.t1 MTR_7g109135 30.603 232 148 8 91 313 1 228 2.72e-20 88.6
MS.gene041982.t1 MTR_7g109135 31.792 173 98 7 54 211 61 228 1.58e-11 63.9
MS.gene041982.t1 MTR_8g076760 26.087 276 180 9 52 307 28 299 1.19e-19 88.2
MS.gene041982.t1 MTR_3g100570 25.962 312 192 9 39 316 7 313 3.20e-19 87.0
MS.gene041982.t1 MTR_2g102010 28.302 265 160 7 39 287 18 268 3.32e-19 86.7
MS.gene041982.t1 MTR_2g102010 29.834 181 108 6 48 213 120 296 8.72e-15 73.9
MS.gene041982.t1 MTR_8g099910 26.214 309 195 8 22 312 51 344 4.58e-19 87.0
MS.gene041982.t1 MTR_5g030530 29.667 300 172 13 38 311 8 294 1.00e-18 85.1
MS.gene041982.t1 MTR_6g033280 26.897 290 185 6 33 310 58 332 2.24e-18 85.1
MS.gene041982.t1 MTR_6g091800 23.765 324 189 7 38 314 19 331 2.65e-18 84.7
MS.gene041982.t1 MTR_4g094578 24.211 285 191 6 38 310 29 300 3.77e-18 84.0
MS.gene041982.t1 MTR_3g104810 25.658 304 168 7 51 307 45 337 3.98e-18 84.3
MS.gene041982.t1 MTR_5g024770 25.704 284 174 6 33 310 16 268 4.73e-18 83.6
MS.gene041982.t1 MTR_4g005330 22.289 332 207 10 8 313 47 353 6.01e-18 84.0
MS.gene041982.t1 MTR_4g005330 22.074 299 197 8 39 313 1 287 2.06e-17 81.6
MS.gene041982.t1 MTR_6g034145 26.236 263 161 6 75 314 1 253 3.59e-17 80.1
MS.gene041982.t1 MTR_4g012850 27.308 260 170 6 38 287 16 266 3.66e-17 80.9
MS.gene041982.t1 MTR_4g012850 28.829 222 140 5 5 211 74 292 4.67e-16 77.8
MS.gene041982.t1 MTR_6g092210 26.848 257 161 6 75 314 1 247 4.81e-17 79.7
MS.gene041982.t1 MTR_2g436930 27.615 239 140 7 104 315 4 236 7.75e-17 79.0
MS.gene041982.t1 MTR_2g436930 25.238 210 132 4 29 214 29 237 8.57e-13 67.4
MS.gene041982.t1 MTR_3g104600 26.861 309 187 8 34 313 31 329 7.80e-17 80.5
MS.gene041982.t1 MTR_6g091800 26.250 240 143 7 38 254 19 247 2.97e-15 75.1
MS.gene041982.t1 MTR_6g091800 26.250 240 143 7 38 254 19 247 3.93e-15 74.7
MS.gene041982.t1 MTR_4g119770 26.295 251 144 7 40 255 16 260 4.96e-15 74.3
MS.gene041982.t1 MTR_4g119770 24.074 216 139 4 129 324 11 221 4.12e-11 62.8
MS.gene041982.t1 MTR_5g081150 33.537 164 100 3 166 325 75 233 8.24e-15 73.6
MS.gene041982.t1 MTR_7g066690 26.263 297 182 12 40 314 19 300 8.83e-15 73.9
MS.gene041982.t1 MTR_5g081150 33.537 164 100 3 166 325 75 233 9.29e-15 73.6
MS.gene041982.t1 MTR_7g083790 26.224 286 183 7 40 312 83 353 1.17e-14 74.3
MS.gene041982.t1 MTR_4g088545 27.178 287 186 7 39 307 13 294 1.77e-14 73.2
MS.gene041982.t1 MTR_1g088995 29.258 229 146 6 33 255 32 250 2.39e-14 72.8
MS.gene041982.t1 MTR_4g016730 24.908 273 170 7 54 313 105 355 2.96e-14 73.2
MS.gene041982.t1 MTR_4g016730 22.222 180 126 3 30 209 188 353 1.62e-11 65.1
MS.gene041982.t1 MTR_8g068890 24.841 314 191 8 39 316 11 315 3.03e-14 72.8
MS.gene041982.t1 MTR_5g032420 24.688 320 191 7 39 316 11 322 6.33e-14 71.6
MS.gene041982.t1 MTR_1g090330 22.887 284 191 8 42 307 18 291 6.35e-14 71.6
MS.gene041982.t1 MTR_4g018750 26.102 295 181 13 40 312 17 296 1.36e-13 70.5
MS.gene041982.t1 MTR_3g462140 29.012 162 108 3 54 209 136 296 2.74e-13 69.7
MS.gene041982.t1 MTR_3g462140 25.413 303 194 11 32 314 9 299 6.91e-12 65.5
MS.gene041982.t1 MTR_7g084400 25.123 203 137 4 17 209 186 383 1.87e-12 68.2
MS.gene041982.t1 MTR_7g084400 29.255 188 128 3 134 320 209 392 1.82e-11 65.1
MS.gene041982.t1 MTR_8g090210 25.753 299 188 9 33 310 109 394 2.91e-12 67.4
MS.gene041982.t1 MTR_8g090210 27.322 183 121 5 131 311 109 281 4.05e-11 63.9
MS.gene041982.t1 MTR_3g074490 25.888 197 126 6 131 321 115 297 1.06e-11 65.9
MS.gene041982.t1 MTR_3g074490 25.743 303 183 11 33 310 115 400 5.23e-11 63.5
MS.gene041982.t1 MTR_7g109135 31.792 173 98 7 54 211 40 207 1.40e-11 63.5
MS.gene041982.t1 MTR_6g091910 26.974 152 106 1 163 314 63 209 1.46e-11 63.5
MS.gene041982.t1 MTR_4g088545 27.273 242 157 6 39 262 13 253 1.64e-11 64.3
MS.gene041982.t1 MTR_3g090820 25.781 256 157 8 82 310 135 384 2.03e-11 64.7
MS.gene041982.t1 MTR_4g018750 25.957 235 144 10 40 252 17 243 4.67e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene041982.t1 AT1G07030 73.231 325 74 4 1 317 1 320 1.43e-164 461
MS.gene041982.t1 AT1G07030 28.788 198 125 7 128 322 38 222 1.60e-12 67.8
MS.gene041982.t1 AT2G30160 70.149 335 82 3 1 322 1 330 2.62e-161 453
MS.gene041982.t1 AT1G07025 47.500 160 82 2 24 182 8 166 4.00e-38 133
MS.gene041982.t1 AT1G34065 30.208 288 173 8 35 319 72 334 1.76e-37 137
MS.gene041982.t1 AT1G34065 30.476 210 132 5 14 218 135 335 4.83e-18 84.0
MS.gene041982.t1 AT1G34065 30.208 288 173 8 35 319 79 341 2.22e-37 137
MS.gene041982.t1 AT1G34065 30.476 210 132 5 14 218 142 342 6.14e-18 83.6
MS.gene041982.t1 AT4G39460 31.900 279 162 8 35 310 55 308 4.16e-36 133
MS.gene041982.t1 AT4G39460 30.415 217 133 6 14 223 118 323 1.73e-16 79.3
MS.gene041982.t1 AT4G39460 31.900 279 162 8 35 310 55 308 4.16e-36 133
MS.gene041982.t1 AT4G39460 30.415 217 133 6 14 223 118 323 1.73e-16 79.3
MS.gene041982.t1 AT4G39460 31.900 279 162 8 35 310 55 308 4.16e-36 133
MS.gene041982.t1 AT4G39460 30.415 217 133 6 14 223 118 323 1.73e-16 79.3
MS.gene041982.t1 AT1G74240 30.000 320 187 6 27 315 25 338 1.25e-34 130
MS.gene041982.t1 AT4G11440 30.508 295 193 7 24 313 316 603 2.24e-33 130
MS.gene041982.t1 AT4G11440 30.508 295 193 7 24 313 316 603 2.24e-33 130
MS.gene041982.t1 AT4G32400 28.472 288 190 6 38 319 114 391 3.57e-33 126
MS.gene041982.t1 AT4G32400 26.042 192 124 7 38 218 208 392 1.55e-11 65.1
MS.gene041982.t1 AT5G15640 28.947 304 185 7 30 307 8 306 9.21e-31 118
MS.gene041982.t1 AT5G15640 29.097 299 186 6 30 307 20 313 1.03e-30 118
MS.gene041982.t1 AT1G74240 29.831 295 170 6 52 315 2 290 1.50e-29 115
MS.gene041982.t1 AT4G01100 28.344 314 184 7 38 310 42 355 2.67e-27 110
MS.gene041982.t1 AT4G01100 25.000 204 129 5 135 317 46 246 9.21e-12 65.9
MS.gene041982.t1 AT4G01100 28.383 303 190 8 38 313 42 344 9.60e-27 108
MS.gene041982.t1 AT4G01100 26.842 190 129 4 135 317 46 232 1.07e-14 74.3
MS.gene041982.t1 AT2G37890 26.936 297 199 5 32 313 39 332 2.99e-26 107
MS.gene041982.t1 AT2G37890 31.720 186 116 4 38 214 152 335 6.46e-21 92.0
MS.gene041982.t1 AT2G37890 32.237 152 89 3 172 316 92 236 3.70e-13 69.7
MS.gene041982.t1 AT3G55640 26.174 298 200 6 38 319 38 331 3.52e-26 106
MS.gene041982.t1 AT3G55640 26.174 298 200 6 38 319 38 331 3.52e-26 106
MS.gene041982.t1 AT5G42130 26.690 281 191 8 49 321 129 402 4.27e-26 107
MS.gene041982.t1 AT5G26200 27.113 284 176 5 51 307 52 331 9.04e-26 105
MS.gene041982.t1 AT2G47490 30.292 274 171 7 54 313 33 300 1.13e-25 104
MS.gene041982.t1 AT2G47490 31.638 177 101 7 50 211 129 300 1.54e-11 64.7
MS.gene041982.t1 AT1G72820 27.986 293 171 7 51 307 44 332 3.67e-25 103
MS.gene041982.t1 AT1G72820 27.986 293 171 7 51 307 44 332 3.67e-25 103
MS.gene041982.t1 AT4G01100 28.231 294 184 8 47 313 1 294 1.80e-24 101
MS.gene041982.t1 AT4G01100 28.205 195 114 4 40 208 97 291 3.97e-18 83.6
MS.gene041982.t1 AT4G01100 25.683 183 127 3 142 317 2 182 2.93e-14 72.8
MS.gene041982.t1 AT5G61810 24.458 323 203 7 17 310 19 329 5.78e-23 97.8
MS.gene041982.t1 AT5G61810 25.140 179 127 4 38 211 156 332 4.62e-13 69.3
MS.gene041982.t1 AT1G25380 28.159 277 179 6 54 315 37 308 7.17e-23 97.8
MS.gene041982.t1 AT1G25380 29.167 192 115 7 50 223 133 321 1.62e-11 65.1
MS.gene041982.t1 AT1G25380 28.159 277 179 6 54 315 37 308 7.17e-23 97.8
MS.gene041982.t1 AT1G25380 29.167 192 115 7 50 223 133 321 1.62e-11 65.1
MS.gene041982.t1 AT5G51050 25.150 334 200 9 17 314 177 496 1.05e-22 98.6
MS.gene041982.t1 AT5G51050 28.218 202 133 4 121 319 215 407 1.86e-13 71.2
MS.gene041982.t1 AT2G17270 26.148 283 180 7 39 310 23 287 2.07e-22 95.9
MS.gene041982.t1 AT5G61810 24.383 324 204 7 17 311 162 473 2.29e-22 97.8
MS.gene041982.t1 AT5G61810 25.140 179 127 4 38 211 299 475 7.44e-13 69.3
MS.gene041982.t1 AT1G79900 31.405 242 144 7 53 287 31 257 3.56e-22 94.7
MS.gene041982.t1 AT1G79900 30.653 199 118 5 25 216 103 288 7.54e-20 88.6
MS.gene041982.t1 AT3G53940 27.797 295 187 8 38 313 73 360 3.93e-22 95.9
MS.gene041982.t1 AT3G53940 31.892 185 117 4 38 214 180 363 2.00e-20 91.3
MS.gene041982.t1 AT3G53940 29.697 165 108 2 166 326 114 274 6.96e-14 72.0
MS.gene041982.t1 AT5G01500 28.090 267 172 7 54 313 135 388 5.43e-21 93.2
MS.gene041982.t1 AT2G35800 26.962 293 195 7 24 314 531 806 7.08e-21 94.0
MS.gene041982.t1 AT1G14560 26.207 290 180 7 51 314 40 321 2.53e-20 90.5
MS.gene041982.t1 AT1G14560 23.590 195 125 2 38 208 123 317 4.18e-14 72.4
MS.gene041982.t1 AT5G46800 29.412 306 174 11 35 311 5 297 3.21e-20 89.7
MS.gene041982.t1 AT5G46800 29.412 306 174 11 35 311 5 297 3.21e-20 89.7
MS.gene041982.t1 AT5G46800 29.412 306 174 11 35 311 5 297 3.21e-20 89.7
MS.gene041982.t1 AT3G20240 23.684 304 198 7 39 319 53 345 4.37e-20 89.7
MS.gene041982.t1 AT3G51870 25.368 272 185 5 54 319 107 366 2.10e-19 88.2
MS.gene041982.t1 AT3G51870 22.283 184 131 3 30 209 183 358 4.50e-12 66.6
MS.gene041982.t1 AT5G07320 26.667 270 180 8 47 311 218 474 9.17e-19 87.0
MS.gene041982.t1 AT5G07320 24.719 178 129 2 38 211 300 476 2.07e-12 68.2
MS.gene041982.t1 AT4G26180 25.839 298 184 10 38 310 21 306 9.40e-19 85.9
MS.gene041982.t1 AT4G24570 26.250 320 177 9 39 316 11 313 2.52e-18 84.3
MS.gene041982.t1 AT5G66380 24.272 309 205 10 35 321 7 308 2.97e-18 84.3
MS.gene041982.t1 AT5G01340 25.532 282 185 8 39 304 18 290 3.19e-18 84.0
MS.gene041982.t1 AT5G14040 25.796 314 202 8 15 312 55 353 1.79e-17 82.8
MS.gene041982.t1 AT5G09470 25.887 282 181 6 54 315 61 334 2.12e-17 82.0
MS.gene041982.t1 AT2G26360 25.448 279 186 6 33 307 110 370 2.43e-17 82.4
MS.gene041982.t1 AT1G14560 26.236 263 160 7 51 287 40 294 1.51e-16 79.3
MS.gene041982.t1 AT1G14560 31.250 176 106 4 148 310 43 216 3.47e-12 66.6
MS.gene041982.t1 AT1G14560 23.392 171 107 2 38 184 123 293 9.29e-11 62.4
MS.gene041982.t1 AT4G26180 25.818 275 167 10 38 287 21 283 1.68e-16 79.0
MS.gene041982.t1 AT4G26180 26.738 187 123 4 135 310 25 208 7.00e-11 62.4
MS.gene041982.t1 AT3G48850 23.944 284 189 5 39 310 72 340 5.14e-16 78.2
MS.gene041982.t1 AT5G48970 24.611 321 191 10 40 318 24 335 8.29e-16 77.4
MS.gene041982.t1 AT5G48970 24.887 221 143 4 123 325 13 228 2.30e-13 70.5
MS.gene041982.t1 AT2G22500 24.516 310 195 8 39 317 11 312 1.40e-15 76.6
MS.gene041982.t1 AT3G21390 23.344 317 195 9 40 314 21 331 2.42e-15 76.3
MS.gene041982.t1 AT3G21390 25.352 213 138 4 123 319 10 217 3.69e-12 66.6
MS.gene041982.t1 AT3G21390 23.344 317 195 9 40 314 43 353 4.10e-15 75.5
MS.gene041982.t1 AT3G21390 25.352 213 138 4 123 319 32 239 5.15e-12 66.6
MS.gene041982.t1 AT1G14560 23.590 195 125 2 38 208 25 219 9.69e-15 72.8
MS.gene041982.t1 AT3G55640 30.519 154 99 3 166 315 79 228 2.02e-14 72.4
MS.gene041982.t1 AT3G55640 30.519 154 99 3 166 315 79 228 2.02e-14 72.4
MS.gene041982.t1 AT5G48970 25.461 271 164 8 77 318 3 264 3.14e-14 72.0
MS.gene041982.t1 AT4G03115 26.383 235 158 6 25 255 29 252 3.69e-14 72.4
MS.gene041982.t1 AT3G53940 29.697 165 108 2 166 326 114 274 3.93e-14 72.0
MS.gene041982.t1 AT3G54110 24.000 300 193 9 42 320 19 304 5.28e-14 72.0
MS.gene041982.t1 AT3G54110 25.683 183 130 2 38 214 118 300 4.92e-12 66.2
MS.gene041982.t1 AT4G03115 26.383 235 158 6 25 255 61 284 5.63e-14 72.4
MS.gene041982.t1 AT2G33820 24.832 298 193 9 27 301 7 296 1.73e-13 70.5
MS.gene041982.t1 AT4G27940 27.607 163 92 3 163 307 146 300 8.63e-13 68.9
MS.gene041982.t1 AT4G03115 28.000 175 120 3 82 255 12 181 1.83e-12 66.6
MS.gene041982.t1 AT4G03115 28.000 175 120 3 82 255 20 189 2.00e-12 66.6
MS.gene041982.t1 AT5G58970 24.503 302 195 11 32 313 10 298 3.15e-12 66.6
MS.gene041982.t1 AT1G14140 24.483 290 188 10 38 307 16 294 6.59e-12 65.9
MS.gene041982.t1 AT5G56450 25.275 182 127 4 39 212 146 326 6.80e-12 65.9
MS.gene041982.t1 AT2G33820 24.183 306 193 10 27 301 7 304 5.19e-11 63.2
MS.gene041982.t1 AT2G33820 28.415 183 118 4 134 307 20 198 9.87e-11 62.0

Find 84 sgRNAs with CRISPR-Local

Find 342 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTGGCAATTCATGATTTC+TGG 0.143348 5.4:+61049758 MS.gene041982:CDS
GTGAAATCGGGTCGGTAATC+TGG 0.205138 5.4:-61049692 None:intergenic
CTGACGGAAACGGATTTAAT+TGG 0.211854 5.4:-61049863 None:intergenic
CTTTCTGCTCGTTGTAATCT+TGG 0.231051 5.4:-61053820 None:intergenic
GTTGAGTAATAGTGGTTATA+AGG 0.239383 5.4:+61050129 MS.gene041982:CDS
GCGAAATGCACAGCAGTAAA+AGG 0.303287 5.4:-61050241 None:intergenic
CTCGTTGTAATCTTGGAAAA+AGG 0.310351 5.4:-61053813 None:intergenic
TACAACGAGCAGAAAGATTC+TGG 0.317286 5.4:+61053827 MS.gene041982:CDS
CGGCGTTAAGTTTGTGAAAT+CGG 0.318663 5.4:-61049705 None:intergenic
GCTACTGCCGGGGCGGCTGC+TGG 0.323395 5.4:+61050340 MS.gene041982:CDS
TGTTAAAACAATAGTGAAAA+AGG 0.326887 5.4:+61053694 MS.gene041982:CDS
ATGATTTCTGGATCCATTGC+TGG 0.344227 5.4:+61049770 MS.gene041982:CDS
GGTATCGGCGCAATGGGCCT+TGG 0.353814 5.4:+61049938 MS.gene041982:CDS
TGCGCCGATACCGCGGTATA+AGG 0.353836 5.4:-61049927 None:intergenic
CTCCCGCAGCCGCTATCTGC+TGG 0.375742 5.4:+61053768 MS.gene041982:CDS
CTGCCGGGGCGGCTGCTGGT+GGG 0.377867 5.4:+61050344 MS.gene041982:CDS
ACTGCCGGGGCGGCTGCTGG+TGG 0.398253 5.4:+61050343 MS.gene041982:CDS
GGCGCAATGGGCCTTGGTGC+CGG 0.398481 5.4:+61049944 MS.gene041982:CDS
CGGGGCGGCTGCTGGTGGGT+TGG 0.405879 5.4:+61050348 MS.gene041982:CDS
GTATAAGGCGGACGGGCCTT+CGG 0.413742 5.4:-61049912 None:intergenic
CTCTCATCATCAACACTCTC+TGG 0.417304 5.4:-61050304 None:intergenic
GGCGTTAAGTTTGTGAAATC+GGG 0.424412 5.4:-61049704 None:intergenic
TTGATTGTTCATGCTACTGC+CGG 0.428369 5.4:+61050328 MS.gene041982:CDS
AATGGGCCTTGGTGCCGGTC+CGG 0.428423 5.4:+61049949 MS.gene041982:CDS
CAACCCACCAGCAGCCGCCC+CGG 0.433417 5.4:-61050347 None:intergenic
GGTGTTTACGCCGATGGATA+TGG 0.439120 5.4:+61050090 MS.gene041982:CDS
AAACTTTGTTCTTGCTTCTG+TGG 0.444930 5.4:-61049663 None:intergenic
TACCGCGGTATCGGCGCAAT+GGG 0.459673 5.4:+61049932 MS.gene041982:CDS
TGTTCTTGCTTCTGTGGCCA+TGG 0.460311 5.4:-61049657 None:intergenic
TGAAATCGGGTCGGTAATCT+GGG 0.463068 5.4:-61049691 None:intergenic
TCGTGAGTTGACGGCGGCGC+CGG 0.465043 5.4:-61049725 None:intergenic
TTGAGTAATAGTGGTTATAA+GGG 0.471100 5.4:+61050130 MS.gene041982:CDS
CTCACGACGGTCTTCACTAC+TGG 0.471340 5.4:+61049741 MS.gene041982:CDS
AGGTTGCAGTTGAGTAATAG+TGG 0.471563 5.4:+61050121 MS.gene041982:CDS
GGAGCATGAAAGAGCATCCT+TGG 0.472086 5.4:-61053749 None:intergenic
TCATGCGAGGGTGGGTTCCA+AGG 0.475084 5.4:+61053732 MS.gene041982:CDS
AAGAGCTTGACTGACGGAAA+CGG 0.478473 5.4:-61049873 None:intergenic
TGATTGTTCATGCTACTGCC+GGG 0.479934 5.4:+61050329 MS.gene041982:CDS
ATAAACAGCGTGGGCCGGAC+CGG 0.485126 5.4:-61049963 None:intergenic
TGCTGGTCTACATATGAAGC+TGG 0.491218 5.4:+61053785 MS.gene041982:CDS
TCCGCCTTATACCGCGGTAT+CGG 0.492129 5.4:+61049923 MS.gene041982:CDS
TTTCCGTCAGTCAAGCTCTT+CGG 0.494358 5.4:+61049876 MS.gene041982:CDS
GACCAGCAGATAGCGGCTGC+GGG 0.507968 5.4:-61053770 None:intergenic
ACTTATGAAGCTGCGAAAAG+AGG 0.510074 5.4:+61050265 MS.gene041982:CDS
AGACCAGCAGATAGCGGCTG+CGG 0.512887 5.4:-61053771 None:intergenic
CTTATGAAGCTGCGAAAAGA+GGG 0.516796 5.4:+61050266 MS.gene041982:CDS
TAAAACTCAATTGCAATGCC+AGG 0.525231 5.4:+61050402 MS.gene041982:CDS
ACAAAGGGCTCATGCGAGGG+TGG 0.536925 5.4:+61053723 MS.gene041982:CDS
GAGAAATAAACAGCGTGGGC+CGG 0.537692 5.4:-61049968 None:intergenic
AGGTTCAAAAGTGGTTCCAT+TGG 0.544925 5.4:+61053665 MS.gene041982:CDS
CTCTGTTTCACCATATCCAT+CGG 0.552176 5.4:-61050100 None:intergenic
TTCATGGTGCAGGGTGTGTG+TGG 0.554065 5.4:+61053635 MS.gene041982:intron
TGAAGACCGTCGTGAGTTGA+CGG 0.559910 5.4:-61049734 None:intergenic
TTTAATTGGACAAGATGTGA+TGG 0.562571 5.4:-61049849 None:intergenic
ATACCGCGGTATCGGCGCAA+TGG 0.570095 5.4:+61049931 MS.gene041982:CDS
AGGGTGTGTGTGGATGTGAT+AGG 0.574367 5.4:+61053645 MS.gene041982:intron
CGTGGGCCGGACCGGCACCA+AGG 0.579207 5.4:-61049955 None:intergenic
GGCCCATTGCGCCGATACCG+CGG 0.581793 5.4:-61049934 None:intergenic
TGACGCGGTGTTTACGCCGA+TGG 0.583852 5.4:+61050084 MS.gene041982:CDS
CGGTCAATCTTAAAATCCGA+AGG 0.591376 5.4:+61049896 MS.gene041982:CDS
GTGTTCGATACAACCAGCAA+TGG 0.594126 5.4:-61049783 None:intergenic
TACCGCGGTATAAGGCGGAC+GGG 0.595175 5.4:-61049919 None:intergenic
TGCTGGTTGTATCGAACACA+TGG 0.602280 5.4:+61049787 MS.gene041982:CDS
AACTGAGAAATAAACAGCGT+GGG 0.604326 5.4:-61049972 None:intergenic
CAAAGGGCTCATGCGAGGGT+GGG 0.612108 5.4:+61053724 MS.gene041982:CDS
CGATTTCACAAACTTAACGC+CGG 0.614198 5.4:+61049706 MS.gene041982:CDS
GGCCCGTCCGCCTTATACCG+CGG 0.614223 5.4:+61049917 MS.gene041982:CDS
GGATACAAAGGGCTCATGCG+AGG 0.624051 5.4:+61053719 MS.gene041982:CDS
GATTGTTCATGCTACTGCCG+GGG 0.628010 5.4:+61050330 MS.gene041982:CDS
TGACCGAAGAGCTTGACTGA+CGG 0.634127 5.4:-61049879 None:intergenic
GATACAAAGGGCTCATGCGA+GGG 0.636199 5.4:+61053720 MS.gene041982:CDS
ATACCGCGGTATAAGGCGGA+CGG 0.638059 5.4:-61049920 None:intergenic
GCCGATACCGCGGTATAAGG+CGG 0.649019 5.4:-61049924 None:intergenic
TGTTCATGCTACTGCCGGGG+CGG 0.649622 5.4:+61050333 MS.gene041982:CDS
CAGAGAGTGTTGATGATGAG+AGG 0.663254 5.4:+61050305 MS.gene041982:CDS
TTAAGTTTGTGAAATCGGGT+CGG 0.668350 5.4:-61049700 None:intergenic
ATATGTAGACCAGCAGATAG+CGG 0.675850 5.4:-61053777 None:intergenic
CACCGCGTCACTCGCCACCG+TGG 0.676134 5.4:-61050071 None:intergenic
GGATGTGATAGGTTCAAAAG+TGG 0.680142 5.4:+61053656 MS.gene041982:CDS
TGCCACGGTGGCGAGTGACG+CGG 0.686339 5.4:+61050069 MS.gene041982:CDS
AAACTGAGAAATAAACAGCG+TGG 0.696014 5.4:-61049973 None:intergenic
CGATGGATATGGTGAAACAG+AGG 0.697564 5.4:+61050101 MS.gene041982:CDS
AGACCGTCGTGAGTTGACGG+CGG 0.717166 5.4:-61049731 None:intergenic
GCGCCGCCGTCAACTCACGA+CGG 0.745640 5.4:+61049728 MS.gene041982:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTCTTTTAGGTTATTTTT+AGG - chr5.4:61051006-61051025 None:intergenic 15.0%
!!! GATTATTTGTTATTTTTTGT+TGG + chr5.4:61053285-61053304 MS.gene041982:intron 15.0%
!!! TTCTTTTCTTTATTTCTTTT+AGG - chr5.4:61051017-61051036 None:intergenic 15.0%
!!! TTTCTTTTAGGTTATTTTTA+GGG - chr5.4:61051005-61051024 None:intergenic 15.0%
!! AAAGAATGATTGTAAATGAA+GGG + chr5.4:61053546-61053565 MS.gene041982:intron 20.0%
!! AAATTGTTTACTACTCAAAT+AGG + chr5.4:61052998-61053017 MS.gene041982:intron 20.0%
!! AATTCATAATATATGTTGAG+GGG + chr5.4:61052001-61052020 MS.gene041982:intron 20.0%
!! ATTAGGTTAAATTACACATT+TGG - chr5.4:61053227-61053246 None:intergenic 20.0%
!! GAATTCATAATATATGTTGA+GGG + chr5.4:61052000-61052019 MS.gene041982:intron 20.0%
!! TAAAGAATGATTGTAAATGA+AGG + chr5.4:61053545-61053564 MS.gene041982:intron 20.0%
!! TGATTCATTATAAGATGTTA+TGG + chr5.4:61051755-61051774 MS.gene041982:intron 20.0%
!! TGTTAAAACAATAGTGAAAA+AGG + chr5.4:61053694-61053713 MS.gene041982:CDS 20.0%
!!! AAAAGGTTTTAAATCTGATT+AGG + chr5.4:61053263-61053282 MS.gene041982:intron 20.0%
!!! AAAGTTTTACGATTTTTGAT+AGG - chr5.4:61052832-61052851 None:intergenic 20.0%
!!! AAGATTTTTGTTATTCTTGT+TGG + chr5.4:61051822-61051841 MS.gene041982:intron 20.0%
!!! AATTATTCTTTGTTCTGTTT+TGG - chr5.4:61053168-61053187 None:intergenic 20.0%
!!! ACAAAAATCTTTTTCAACTT+AGG - chr5.4:61051813-61051832 None:intergenic 20.0%
!!! ACTCAAGATGTTATTTTATT+TGG + chr5.4:61053438-61053457 MS.gene041982:intron 20.0%
!!! ACTTTTATTATACGAATGTT+TGG + chr5.4:61053478-61053497 MS.gene041982:intron 20.0%
!!! ATGTGAGAATTTCTTTTTAA+GGG - chr5.4:61050005-61050024 None:intergenic 20.0%
!!! TAAATTTTAAACCGTTTCTA+GGG - chr5.4:61051292-61051311 None:intergenic 20.0%
!!! TAGAAACGGTTTAAAATTTA+GGG + chr5.4:61051292-61051311 MS.gene041982:intron 20.0%
!!! TATTCCCTATCTATTTTATA+GGG + chr5.4:61051961-61051980 MS.gene041982:intron 20.0%
!!! TATTTTTCAGTACTATTTAC+AGG + chr5.4:61053056-61053075 MS.gene041982:intron 20.0%
!!! TTGTGGAATGAAATTTTTTT+GGG + chr5.4:61051167-61051186 MS.gene041982:intron 20.0%
! AAAACAATAGTGAAAAAGGA+CGG + chr5.4:61053698-61053717 MS.gene041982:CDS 25.0%
! AAAAGCCCTATAAAATAGAT+AGG - chr5.4:61051969-61051988 None:intergenic 25.0%
! AAAGCCCTATAAAATAGATA+GGG - chr5.4:61051968-61051987 None:intergenic 25.0%
! AAGAATGATTGTAAATGAAG+GGG + chr5.4:61053547-61053566 MS.gene041982:intron 25.0%
! AATTGACATAATAATGAAGC+TGG + chr5.4:61052258-61052277 MS.gene041982:intron 25.0%
! ACATATAAAATTGACACCAT+TGG - chr5.4:61051938-61051957 None:intergenic 25.0%
! ATATTGTTTGATATGGTCTA+TGG + chr5.4:61053380-61053399 MS.gene041982:intron 25.0%
! CTTAAAAAGAAATTCTCACA+TGG + chr5.4:61050004-61050023 MS.gene041982:CDS 25.0%
! GAAACCACAAAATTAGTTAA+GGG + chr5.4:61053200-61053219 MS.gene041982:intron 25.0%
! GGAATTCATAATATATGTTG+AGG + chr5.4:61051999-61052018 MS.gene041982:intron 25.0%
! GTTCATATGCTAAACTTTAA+AGG - chr5.4:61050543-61050562 None:intergenic 25.0%
! TCAAATTACACTACACTATA+GGG - chr5.4:61050666-61050685 None:intergenic 25.0%
! TCGTTTGATCAGAAAATATT+AGG - chr5.4:61053244-61053263 None:intergenic 25.0%
! TGAAACCACAAAATTAGTTA+AGG + chr5.4:61053199-61053218 MS.gene041982:intron 25.0%
! TGAAGCAAATGATATTAGTA+GGG + chr5.4:61051614-61051633 MS.gene041982:intron 25.0%
! TGTTGTCATATTGTTTGATA+TGG + chr5.4:61053373-61053392 MS.gene041982:intron 25.0%
! TTCAAATTACACTACACTAT+AGG - chr5.4:61050667-61050686 None:intergenic 25.0%
! TTGAGTAATAGTGGTTATAA+GGG + chr5.4:61050130-61050149 MS.gene041982:CDS 25.0%
! TTTACATATATGTATGCCAT+TGG + chr5.4:61053087-61053106 MS.gene041982:intron 25.0%
!! ATGTGCTCTTTTAATGAATT+TGG + chr5.4:61050572-61050591 MS.gene041982:intron 25.0%
!! CATGTGAGAATTTCTTTTTA+AGG - chr5.4:61050006-61050025 None:intergenic 25.0%
!! CTAAATTTTAAACCGTTTCT+AGG - chr5.4:61051293-61051312 None:intergenic 25.0%
!! CTAGAAACGGTTTAAAATTT+AGG + chr5.4:61051291-61051310 MS.gene041982:intron 25.0%
!! CTATTCCCTATCTATTTTAT+AGG + chr5.4:61051960-61051979 MS.gene041982:intron 25.0%
!! TAACAATTATTTTCAGACAG+TGG - chr5.4:61053352-61053371 None:intergenic 25.0%
!! TATTTTCTGATCAAACGAAA+AGG + chr5.4:61053246-61053265 MS.gene041982:intron 25.0%
!! TGTGCTCTTTTAATGAATTT+GGG + chr5.4:61050573-61050592 MS.gene041982:intron 25.0%
!!! AAATCTTTTTCAACTTAGGA+TGG - chr5.4:61051809-61051828 None:intergenic 25.0%
!!! AATGGTTTTGAAAAATTAGG+GGG + chr5.4:61051867-61051886 MS.gene041982:intron 25.0%
!!! AATTTTGTTGTTTGAACCAA+TGG + chr5.4:61051919-61051938 MS.gene041982:intron 25.0%
!!! ACAGAATTGTTGATTTTTGT+CGG + chr5.4:61053113-61053132 MS.gene041982:intron 25.0%
!!! ATAGGGCTTTTTTGTTAAAT+TGG + chr5.4:61051978-61051997 MS.gene041982:intron 25.0%
!!! GAATGGTTTTGAAAAATTAG+GGG + chr5.4:61051866-61051885 MS.gene041982:intron 25.0%
!!! GGAATGGTTTTGAAAAATTA+GGG + chr5.4:61051865-61051884 MS.gene041982:intron 25.0%
!!! GGTGGAATATATTTTTTCTT+AGG - chr5.4:61052322-61052341 None:intergenic 25.0%
!!! GTTGTGGAATGAAATTTTTT+TGG + chr5.4:61051166-61051185 MS.gene041982:intron 25.0%
!!! TATTTTTTGTTGGAGCATTA+TGG + chr5.4:61053295-61053314 MS.gene041982:intron 25.0%
!!! TTGCTATTTGACAATATCAT+AGG - chr5.4:61050702-61050721 None:intergenic 25.0%
AACTTATCAAGGAAAATGCA+TGG + chr5.4:61052769-61052788 MS.gene041982:intron 30.0%
ACCAACTAAAGTAAAGTTAG+GGG + chr5.4:61053141-61053160 MS.gene041982:intron 30.0%
AGAGAGAGAGAAATAAATAC+AGG + chr5.4:61052953-61052972 MS.gene041982:intron 30.0%
CAAATTACACTACACTATAG+GGG - chr5.4:61050665-61050684 None:intergenic 30.0%
GACCAACTAAAGTAAAGTTA+GGG + chr5.4:61053140-61053159 MS.gene041982:intron 30.0%
GAGAGAGAGAAATAAATACA+GGG + chr5.4:61052954-61052973 MS.gene041982:intron 30.0%
GAGATAAGAAAGAATCAAGT+GGG - chr5.4:61052403-61052422 None:intergenic 30.0%
GGGTATTACAAATATAAGGT+TGG + chr5.4:61051649-61051668 MS.gene041982:intron 30.0%
GTGAAGCAAATGATATTAGT+AGG + chr5.4:61051613-61051632 MS.gene041982:intron 30.0%
GTTGAGTAATAGTGGTTATA+AGG + chr5.4:61050129-61050148 MS.gene041982:CDS 30.0%
TAAGACATCTGCTTTGATTA+AGG - chr5.4:61050760-61050779 None:intergenic 30.0%
TCAAACTATTACGAGAGATT+TGG + chr5.4:61051705-61051724 MS.gene041982:intron 30.0%
TCAACAATTCTGTTAACCAA+TGG - chr5.4:61053106-61053125 None:intergenic 30.0%
TCTTATCTCATACAAGAAGT+TGG + chr5.4:61052414-61052433 MS.gene041982:intron 30.0%
TGACCAACTAAAGTAAAGTT+AGG + chr5.4:61053139-61053158 MS.gene041982:intron 30.0%
TGAGATAAGAAAGAATCAAG+TGG - chr5.4:61052404-61052423 None:intergenic 30.0%
TGATCTTAACATTGGATTCA+TGG + chr5.4:61053619-61053638 MS.gene041982:intron 30.0%
TGGAGAATTGATCTTAACAT+TGG + chr5.4:61053611-61053630 MS.gene041982:intron 30.0%
TTGGATAGTTGTAGAGTTAT+GGG + chr5.4:61051668-61051687 MS.gene041982:intron 30.0%
TTTAATTGGACAAGATGTGA+TGG - chr5.4:61049852-61049871 None:intergenic 30.0%
! CTATCTAAACTAGTACTGAA+AGG - chr5.4:61052892-61052911 None:intergenic 30.0%
! GATATTAGTAGGGCTTTAAT+TGG + chr5.4:61051624-61051643 MS.gene041982:intron 30.0%
! GGTAGGGTATTACAAATATA+AGG + chr5.4:61051645-61051664 MS.gene041982:intron 30.0%
! TGCATTTTCCTTGATAAGTT+TGG - chr5.4:61052769-61052788 None:intergenic 30.0%
!! GTGCTTTTTATGCTAGTTAT+AGG + chr5.4:61050197-61050216 MS.gene041982:CDS 30.0%
!! TGAGTTTTAACAACATCAAG+CGG - chr5.4:61050391-61050410 None:intergenic 30.0%
!! TGTTTTTGATTGTGTGAAGA+GGG + chr5.4:61050153-61050172 MS.gene041982:CDS 30.0%
!!! GGGAATGGTTTTGAAAAATT+AGG + chr5.4:61051864-61051883 MS.gene041982:intron 30.0%
AAACTCTTTGTGCTTATGTG+GGG + chr5.4:61051557-61051576 MS.gene041982:intron 35.0%
AAACTGAGAAATAAACAGCG+TGG - chr5.4:61049976-61049995 None:intergenic 35.0%
AAACTTTGTTCTTGCTTCTG+TGG - chr5.4:61049666-61049685 None:intergenic 35.0%
AAAGAAGAACCTTTGACTGA+TGG + chr5.4:61051103-61051122 MS.gene041982:intron 35.0%
AACAGAGAAAGAGAACAGAA+CGG + chr5.4:61050813-61050832 MS.gene041982:intron 35.0%
AACTGAGAAATAAACAGCGT+GGG - chr5.4:61049975-61049994 None:intergenic 35.0%
AGAAAGAATCAAGTGGGAAA+AGG - chr5.4:61052397-61052416 None:intergenic 35.0%
AGTTACTAAACTGTGAGAAG+AGG + chr5.4:61051230-61051249 MS.gene041982:intron 35.0%
ATACGAATGTTTGGTATCCT+TGG + chr5.4:61053487-61053506 MS.gene041982:intron 35.0%
ATAGTTGTAGAGTTATGGGT+TGG + chr5.4:61051672-61051691 MS.gene041982:intron 35.0%
ATTGTTGTCATAGCTATACC+TGG - chr5.4:61050423-61050442 None:intergenic 35.0%
ATTTCTCTCTCTCTCATAAC+TGG - chr5.4:61052947-61052966 None:intergenic 35.0%
CAAACTCTTTGTGCTTATGT+GGG + chr5.4:61051556-61051575 MS.gene041982:intron 35.0%
CATAATATATGTTGAGGGGA+TGG + chr5.4:61052005-61052024 MS.gene041982:intron 35.0%
CCAACAAAAAGAATGAGAGT+GGG + chr5.4:61052461-61052480 MS.gene041982:intron 35.0%
CTCGTTGTAATCTTGGAAAA+AGG - chr5.4:61053816-61053835 None:intergenic 35.0%
CTGTTCTCTTTCTCTGTTAT+TGG - chr5.4:61050811-61050830 None:intergenic 35.0%
CTTTCTCTGTTATTGGCATT+GGG - chr5.4:61050804-61050823 None:intergenic 35.0%
GAGAGAATCCAAACTTATCA+AGG + chr5.4:61052758-61052777 MS.gene041982:intron 35.0%
GTTACTAAACTGTGAGAAGA+GGG + chr5.4:61051231-61051250 MS.gene041982:intron 35.0%
GTTGGATAGTTGTAGAGTTA+TGG + chr5.4:61051667-61051686 MS.gene041982:intron 35.0%
TAAAACTCAATTGCAATGCC+AGG + chr5.4:61050402-61050421 MS.gene041982:CDS 35.0%
TACGAATGTTTGGTATCCTT+GGG + chr5.4:61053488-61053507 MS.gene041982:intron 35.0%
TACTGGCAATTCATGATTTC+TGG + chr5.4:61049758-61049777 MS.gene041982:CDS 35.0%
TAGAATCATTGTCAAACCCA+AGG - chr5.4:61053507-61053526 None:intergenic 35.0%
TAGTTAATAGCGCGATATAG+CGG - chr5.4:61051471-61051490 None:intergenic 35.0%
TAGTTGTAGAGTTATGGGTT+GGG + chr5.4:61051673-61051692 MS.gene041982:intron 35.0%
TCCAACAAAAAGAATGAGAG+TGG + chr5.4:61052460-61052479 MS.gene041982:intron 35.0%
TCCCCTAACTTTACTTTAGT+TGG - chr5.4:61053145-61053164 None:intergenic 35.0%
TCTTTCTCTGTTATTGGCAT+TGG - chr5.4:61050805-61050824 None:intergenic 35.0%
TGAAAAAGGACGGATACAAA+GGG + chr5.4:61053708-61053727 MS.gene041982:CDS 35.0%
TGAAAATGACAACCAAACCT+AGG - chr5.4:61051494-61051513 None:intergenic 35.0%
TGATAAGTTTGGATTCTCTC+CGG - chr5.4:61052758-61052777 None:intergenic 35.0%
TGTCAATTCCTATACAGTTC+TGG - chr5.4:61052246-61052265 None:intergenic 35.0%
TTAAGTTTGTGAAATCGGGT+CGG - chr5.4:61049703-61049722 None:intergenic 35.0%
TTCACATTTGAACACAGTAG+TGG + chr5.4:61051328-61051347 MS.gene041982:intron 35.0%
TTGTTGAAATGGTTAGGGAA+TGG + chr5.4:61051849-61051868 MS.gene041982:intron 35.0%
TTTGAGAATGTGAGTTCCAT+AGG + chr5.4:61051533-61051552 MS.gene041982:intron 35.0%
! AAACCGTTTCTAGGGAAATT+TGG - chr5.4:61051284-61051303 None:intergenic 35.0%
! AACCGTTTCTAGGGAAATTT+GGG - chr5.4:61051283-61051302 None:intergenic 35.0%
! AGTGATCATTTTGTTCATGC+TGG + chr5.4:61050034-61050053 MS.gene041982:CDS 35.0%
! ATGTTTTCCTCCATCTTGTA+AGG - chr5.4:61052293-61052312 None:intergenic 35.0%
! CTCATTCTTTTTGTTGGAGA+GGG - chr5.4:61052458-61052477 None:intergenic 35.0%
! GTGATTTTATGCGACTGAAT+GGG + chr5.4:61052052-61052071 MS.gene041982:intron 35.0%
! GTGTGTTGTTGAAATGGTTA+GGG + chr5.4:61051844-61051863 MS.gene041982:intron 35.0%
! TAGTAGGGCTTTAATTGGTA+GGG + chr5.4:61051629-61051648 MS.gene041982:intron 35.0%
! TCTCATTCTTTTTGTTGGAG+AGG - chr5.4:61052459-61052478 None:intergenic 35.0%
! TGATTTTATGCGACTGAATG+GGG + chr5.4:61052053-61052072 MS.gene041982:intron 35.0%
! TGGTCCCTTAACTAATTTTG+TGG - chr5.4:61053207-61053226 None:intergenic 35.0%
! TGTGATTTTATGCGACTGAA+TGG + chr5.4:61052051-61052070 MS.gene041982:intron 35.0%
! TTAGTAGGGCTTTAATTGGT+AGG + chr5.4:61051628-61051647 MS.gene041982:intron 35.0%
! TTGTTGGTGTGTTGTTGAAA+TGG + chr5.4:61051838-61051857 MS.gene041982:intron 35.0%
!! ATGGTGTTGTTTGATTCATG+TGG + chr5.4:61053314-61053333 MS.gene041982:intron 35.0%
!! GTGTTTTTGATTGTGTGAAG+AGG + chr5.4:61050152-61050171 MS.gene041982:CDS 35.0%
!! TCATTTTGTTCATGCTGGTT+CGG + chr5.4:61050039-61050058 MS.gene041982:CDS 35.0%
!! TCCTATACAGTTCTGGAATT+AGG - chr5.4:61052239-61052258 None:intergenic 35.0%
!!! AGAGAAGTTTTGTTGTGCAA+TGG + chr5.4:61051129-61051148 MS.gene041982:intron 35.0%
!!! TGTTTTAACAACATCGCCAA+TGG - chr5.4:61053684-61053703 None:intergenic 35.0%
!!! TTTTGGGTTTTGTTTTGCCA+TGG + chr5.4:61051183-61051202 MS.gene041982:intron 35.0%
AAAAGAATGAGAGTGGGAAG+AGG + chr5.4:61052467-61052486 MS.gene041982:intron 40.0%
AAACTGTGAGAAGAGGGAAA+AGG + chr5.4:61051237-61051256 MS.gene041982:intron 40.0%
AAAGAATGAGAGTGGGAAGA+GGG + chr5.4:61052468-61052487 MS.gene041982:intron 40.0%
AACATTGGATTCATGGTGCA+GGG + chr5.4:61053626-61053645 MS.gene041982:intron 40.0%
AACTGTGAGAAGAGGGAAAA+GGG + chr5.4:61051238-61051257 MS.gene041982:intron 40.0%
AAGAATCAAGTGGGAAAAGG+TGG - chr5.4:61052394-61052413 None:intergenic 40.0%
AAGCACAAAGAGTTTGCCTA+TGG - chr5.4:61051552-61051571 None:intergenic 40.0%
ACTTATGAAGCTGCGAAAAG+AGG + chr5.4:61050265-61050284 MS.gene041982:CDS 40.0%
AGGGGATGGCTAAAACTTAA+AGG + chr5.4:61052019-61052038 MS.gene041982:intron 40.0%
AGGTTCAAAAGTGGTTCCAT+TGG + chr5.4:61053665-61053684 MS.gene041982:CDS 40.0%
AGGTTGCAGTTGAGTAATAG+TGG + chr5.4:61050121-61050140 MS.gene041982:CDS 40.0%
AGTCGCATAAAATCACACTC+AGG - chr5.4:61052048-61052067 None:intergenic 40.0%
ATATACCACATAAGCGCAGA+AGG - chr5.4:61050599-61050618 None:intergenic 40.0%
ATATGTAGACCAGCAGATAG+CGG - chr5.4:61053780-61053799 None:intergenic 40.0%
CATTCACAAGTCACAAACAC+AGG - chr5.4:61050623-61050642 None:intergenic 40.0%
CGATTTCACAAACTTAACGC+CGG + chr5.4:61049706-61049725 MS.gene041982:CDS 40.0%
CGCTATTAACTACCTAGGTT+TGG + chr5.4:61051479-61051498 MS.gene041982:intron 40.0%
CGGCGTTAAGTTTGTGAAAT+CGG - chr5.4:61049708-61049727 None:intergenic 40.0%
CGGTACCAAAACTTCATGTT+GGG - chr5.4:61052101-61052120 None:intergenic 40.0%
CGGTCAATCTTAAAATCCGA+AGG + chr5.4:61049896-61049915 MS.gene041982:CDS 40.0%
CTCCAACGAGAGAAAAGATA+GGG - chr5.4:61053596-61053615 None:intergenic 40.0%
CTCTGTTTCACCATATCCAT+CGG - chr5.4:61050103-61050122 None:intergenic 40.0%
CTTATGAAGCTGCGAAAAGA+GGG + chr5.4:61050266-61050285 MS.gene041982:CDS 40.0%
CTTTCTGCTCGTTGTAATCT+TGG - chr5.4:61053823-61053842 None:intergenic 40.0%
GCAAACTCTTTGTGCTTATG+TGG + chr5.4:61051555-61051574 MS.gene041982:intron 40.0%
GCCTAATTCCAGAACTGTAT+AGG + chr5.4:61052235-61052254 MS.gene041982:intron 40.0%
GGATGGCTAAAACTTAAAGG+TGG + chr5.4:61052022-61052041 MS.gene041982:intron 40.0%
GGCGTTAAGTTTGTGAAATC+GGG - chr5.4:61049707-61049726 None:intergenic 40.0%
GGTACCAAAACTTCATGTTG+GGG - chr5.4:61052100-61052119 None:intergenic 40.0%
GTGAAAAAGGACGGATACAA+AGG + chr5.4:61053707-61053726 MS.gene041982:CDS 40.0%
TAACATTGGATTCATGGTGC+AGG + chr5.4:61053625-61053644 MS.gene041982:intron 40.0%
TACAACGAGCAGAAAGATTC+TGG + chr5.4:61053827-61053846 MS.gene041982:CDS 40.0%
TATCGCGCTATTAACTACCT+AGG + chr5.4:61051474-61051493 MS.gene041982:intron 40.0%
TATTGCGAACTTCTCTGCTA+TGG + chr5.4:61051410-61051429 MS.gene041982:intron 40.0%
TCCCCAAATTTCCCTAGAAA+CGG + chr5.4:61051278-61051297 MS.gene041982:intron 40.0%
TCTCCAACGAGAGAAAAGAT+AGG - chr5.4:61053597-61053616 None:intergenic 40.0%
TGGGAAAAGGTGGTTTAATG+TGG - chr5.4:61052384-61052403 None:intergenic 40.0%
TGGTCTATGGTGTTTGATCA+AGG + chr5.4:61053393-61053412 MS.gene041982:intron 40.0%
TTGATTGTTCATGCTACTGC+CGG + chr5.4:61050328-61050347 MS.gene041982:CDS 40.0%
! ACCGTTTCTAGGGAAATTTG+GGG - chr5.4:61051282-61051301 None:intergenic 40.0%
! ATCCCTATCTTTTCTCTCGT+TGG + chr5.4:61053591-61053610 MS.gene041982:intron 40.0%
! ATGATTTCTGGATCCATTGC+TGG + chr5.4:61049770-61049789 MS.gene041982:CDS 40.0%
! CCCACTCTCATTCTTTTTGT+TGG - chr5.4:61052464-61052483 None:intergenic 40.0%
! CTGACGGAAACGGATTTAAT+TGG - chr5.4:61049866-61049885 None:intergenic 40.0%
! CTGTGTTTGTGACTTGTGAA+TGG + chr5.4:61050621-61050640 MS.gene041982:intron 40.0%
! GGTGTGTTGTTGAAATGGTT+AGG + chr5.4:61051843-61051862 MS.gene041982:intron 40.0%
! TCTGGAATTAGGCAGTAACA+GGG - chr5.4:61052228-61052247 None:intergenic 40.0%
!! AGGGAAATGAGGAGTTGATA+TGG + chr5.4:61052499-61052518 MS.gene041982:intron 40.0%
!! CAACATGAAGTTTTGGTACC+GGG + chr5.4:61052100-61052119 MS.gene041982:intron 40.0%
!! CCAACATGAAGTTTTGGTAC+CGG + chr5.4:61052099-61052118 MS.gene041982:intron 40.0%
!! GGCTTGCATGTGAGTTTTAA+CGG - chr5.4:61049831-61049850 None:intergenic 40.0%
!! GTGAGTTTTAACGGTGTCAA+CGG - chr5.4:61049822-61049841 None:intergenic 40.0%
!! TGAGTTTTAACGGTGTCAAC+GGG - chr5.4:61049821-61049840 None:intergenic 40.0%
!! TTCTGGAATTAGGCAGTAAC+AGG - chr5.4:61052229-61052248 None:intergenic 40.0%
!! TTGGGTGCTGTTATGATGAT+AGG + chr5.4:61052178-61052197 MS.gene041982:intron 40.0%
!!! AAGTTTTGTTGTGCAATGGC+TGG + chr5.4:61051133-61051152 MS.gene041982:intron 40.0%
!!! AGTTTTGTTGTGCAATGGCT+GGG + chr5.4:61051134-61051153 MS.gene041982:intron 40.0%
!!! ATTTTGTTCATGCTGGTTCG+GGG + chr5.4:61050041-61050060 MS.gene041982:CDS 40.0%
!!! CATTTTGTTCATGCTGGTTC+GGG + chr5.4:61050040-61050059 MS.gene041982:CDS 40.0%
!!! GGATTTTTTGACAACTGCGA+TGG + chr5.4:61052622-61052641 MS.gene041982:intron 40.0%
AAGAGCTTGACTGACGGAAA+CGG - chr5.4:61049876-61049895 None:intergenic 45.0%
ATGGCCCACGACAAGAATAT+GGG - chr5.4:61052727-61052746 None:intergenic 45.0%
ATTGCAGACTGCAGAGAGTT+TGG + chr5.4:61052159-61052178 MS.gene041982:intron 45.0%
CAGTACTCCTTACAAGATGG+AGG + chr5.4:61052283-61052302 MS.gene041982:intron 45.0%
CCGGTACCAAAACTTCATGT+TGG - chr5.4:61052102-61052121 None:intergenic 45.0%
CGATGGATATGGTGAAACAG+AGG + chr5.4:61050101-61050120 MS.gene041982:CDS 45.0%
CTAGGGAAATTTGGGGATCT+AGG - chr5.4:61051275-61051294 None:intergenic 45.0%
CTCTCATCATCAACACTCTC+TGG - chr5.4:61050307-61050326 None:intergenic 45.0%
CTGGAATTAGGCAGTAACAG+GGG - chr5.4:61052227-61052246 None:intergenic 45.0%
GAGAAGAGGGAAAAGGGTTA+GGG + chr5.4:61051244-61051263 MS.gene041982:intron 45.0%
GAGCAGTACTCCTTACAAGA+TGG + chr5.4:61052280-61052299 MS.gene041982:intron 45.0%
GATATAGCGGCATATCGAAG+CGG - chr5.4:61051458-61051477 None:intergenic 45.0%
GCGAAATGCACAGCAGTAAA+AGG - chr5.4:61050244-61050263 None:intergenic 45.0%
GGATTTGTGCATTCTGCACT+TGG - chr5.4:61052206-61052225 None:intergenic 45.0%
GTGTTCGATACAACCAGCAA+TGG - chr5.4:61049786-61049805 None:intergenic 45.0%
TGAAATCGGGTCGGTAATCT+GGG - chr5.4:61049694-61049713 None:intergenic 45.0%
TGAGAAGAGGGAAAAGGGTT+AGG + chr5.4:61051243-61051262 MS.gene041982:intron 45.0%
TGATTGTTCATGCTACTGCC+GGG + chr5.4:61050329-61050348 MS.gene041982:CDS 45.0%
TTCCCCCATATTCTTGTCGT+GGG + chr5.4:61052720-61052739 MS.gene041982:intron 45.0%
TTCTCTCAGCCATCAGTCAA+AGG - chr5.4:61051115-61051134 None:intergenic 45.0%
TTGCAGACTGCAGAGAGTTT+GGG + chr5.4:61052160-61052179 MS.gene041982:intron 45.0%
TTTCCGTCAGTCAAGCTCTT+CGG + chr5.4:61049876-61049895 MS.gene041982:CDS 45.0%
! TGCTGGTCTACATATGAAGC+TGG + chr5.4:61053785-61053804 MS.gene041982:CDS 45.0%
! TGCTGGTTGTATCGAACACA+TGG + chr5.4:61049787-61049806 MS.gene041982:CDS 45.0%
!! CAGAGAGTGTTGATGATGAG+AGG + chr5.4:61050305-61050324 MS.gene041982:CDS 45.0%
!! CTGTTTGTGCAGCGGATTTT+TGG + chr5.4:61052695-61052714 MS.gene041982:intron 45.0%
!! GAGCGCGAAGTGTTGTTAAA+TGG + chr5.4:61052569-61052588 MS.gene041982:intron 45.0%
!! GTTTTGAGTGAGGAAGGGTT+TGG + chr5.4:61050175-61050194 MS.gene041982:CDS 45.0%
!! TAAATGGTGTTGCACCCCTA+TGG + chr5.4:61052585-61052604 MS.gene041982:intron 45.0%
!!! AAGAGGGTTTTGAGTGAGGA+AGG + chr5.4:61050169-61050188 MS.gene041982:CDS 45.0%
!!! AGAGGGTTTTGAGTGAGGAA+GGG + chr5.4:61050170-61050189 MS.gene041982:CDS 45.0%
!!! GGTTTTGTTTTGCCATGGCT+GGG + chr5.4:61051188-61051207 MS.gene041982:intron 45.0%
!!! TGTGAAGAGGGTTTTGAGTG+AGG + chr5.4:61050165-61050184 MS.gene041982:CDS 45.0%
!!! TTTTGTTCATGCTGGTTCGG+GGG + chr5.4:61050042-61050061 MS.gene041982:CDS 45.0%
AAACAGAACACTGCGGCCTA+TGG - chr5.4:61052681-61052700 None:intergenic 50.0%
ACCACAGCATTCTGCCATAG+GGG - chr5.4:61052602-61052621 None:intergenic 50.0%
ACCTTGAAGCAGCACAAACC+CGG - chr5.4:61052121-61052140 None:intergenic 50.0%
ATCTGCTCCTTCTCGGTCAA+GGG - chr5.4:61052343-61052362 None:intergenic 50.0%
CACCACAGCATTCTGCCATA+GGG - chr5.4:61052603-61052622 None:intergenic 50.0%
CACGACAAGAATATGGGGGA+AGG - chr5.4:61052721-61052740 None:intergenic 50.0%
CTTCCCCCATATTCTTGTCG+TGG + chr5.4:61052719-61052738 MS.gene041982:intron 50.0%
GAGAAATAAACAGCGTGGGC+CGG - chr5.4:61049971-61049990 None:intergenic 50.0%
GAGAGGGATGCATGTATGAG+AGG - chr5.4:61052442-61052461 None:intergenic 50.0%
GATACAAAGGGCTCATGCGA+GGG + chr5.4:61053720-61053739 MS.gene041982:CDS 50.0%
GATGGCCCACGACAAGAATA+TGG - chr5.4:61052728-61052747 None:intergenic 50.0%
GATTGTTCATGCTACTGCCG+GGG + chr5.4:61050330-61050349 MS.gene041982:CDS 50.0%
GCAGTGTTCTGTTTGTGCAG+CGG + chr5.4:61052687-61052706 MS.gene041982:intron 50.0%
GCTGCACAAACAGAACACTG+CGG - chr5.4:61052688-61052707 None:intergenic 50.0%
GGCTGGGAGTGAAAAGACAA+TGG + chr5.4:61051204-61051223 MS.gene041982:intron 50.0%
GGGAGAAGATGAGGGAAATG+AGG + chr5.4:61052488-61052507 MS.gene041982:intron 50.0%
GGGGATCAAAACACAGCCTT+AGG + chr5.4:61052072-61052091 MS.gene041982:intron 50.0%
GGTGTTTACGCCGATGGATA+TGG + chr5.4:61050090-61050109 MS.gene041982:CDS 50.0%
GTGAAATCGGGTCGGTAATC+TGG - chr5.4:61049695-61049714 None:intergenic 50.0%
TATTCCACCCTTGACCGAGA+AGG + chr5.4:61052333-61052352 MS.gene041982:intron 50.0%
TGACCGAAGAGCTTGACTGA+CGG - chr5.4:61049882-61049901 None:intergenic 50.0%
TGGCCCACGACAAGAATATG+GGG - chr5.4:61052726-61052745 None:intergenic 50.0%
TGGGAAGAGGGAGAAGATGA+GGG + chr5.4:61052480-61052499 MS.gene041982:intron 50.0%
TTCGCAATAGCAGCTGCTCA+AGG - chr5.4:61051399-61051418 None:intergenic 50.0%
! ACTTCATGTTGGGGCACCTA+AGG - chr5.4:61052091-61052110 None:intergenic 50.0%
! GGTGCCCCAACATGAAGTTT+TGG + chr5.4:61052093-61052112 MS.gene041982:intron 50.0%
! TGAAGACCGTCGTGAGTTGA+CGG - chr5.4:61049737-61049756 None:intergenic 50.0%
! TGTCTTTTCACTCCCAGCCA+TGG - chr5.4:61051203-61051222 None:intergenic 50.0%
!! ATTCTCTCCGGTGTTGTCGA+TGG - chr5.4:61052746-61052765 None:intergenic 50.0%
!! GGAGCATGAAAGAGCATCCT+TGG - chr5.4:61053752-61053771 None:intergenic 50.0%
!!! GGCTGGGAGAAGTTTTGTTG+TGG + chr5.4:61051150-61051169 MS.gene041982:intron 50.0%
!!! GGGTTTTGTTTTGCCATGGC+TGG + chr5.4:61051187-61051206 MS.gene041982:intron 50.0%
ACCCCTATGGCAGAATGCTG+TGG + chr5.4:61052598-61052617 MS.gene041982:intron 55.0%
AGCACGGATCTGCTCCTTCT+CGG - chr5.4:61052350-61052369 None:intergenic 55.0%
ATACCGCGGTATAAGGCGGA+CGG - chr5.4:61049923-61049942 None:intergenic 55.0%
CCACCACAGCATTCTGCCAT+AGG - chr5.4:61052604-61052623 None:intergenic 55.0%
CCTATGGCAGAATGCTGTGG+TGG + chr5.4:61052601-61052620 MS.gene041982:intron 55.0%
CTCACGACGGTCTTCACTAC+TGG + chr5.4:61049741-61049760 MS.gene041982:CDS 55.0%
GATCTGCTCCTTCTCGGTCA+AGG - chr5.4:61052344-61052363 None:intergenic 55.0%
GCACACTGTCGTGACAAACG+TGG - chr5.4:61051586-61051605 None:intergenic 55.0%
GGATACAAAGGGCTCATGCG+AGG + chr5.4:61053719-61053738 MS.gene041982:CDS 55.0%
GGCCCACGACAAGAATATGG+GGG - chr5.4:61052725-61052744 None:intergenic 55.0%
GGTGGTTTAATGTGGCAGCG+AGG - chr5.4:61052376-61052395 None:intergenic 55.0%
GTGGGAAGAGGGAGAAGATG+AGG + chr5.4:61052479-61052498 MS.gene041982:intron 55.0%
TCCGCCTTATACCGCGGTAT+CGG + chr5.4:61049923-61049942 MS.gene041982:CDS 55.0%
TGCTATGGCCATTACCAGCG+CGG + chr5.4:61051425-61051444 MS.gene041982:intron 55.0%
TTCATGGTGCAGGGTGTGTG+TGG + chr5.4:61053635-61053654 MS.gene041982:intron 55.0%
TTGGGCCTTCTGCGCTTATG+TGG + chr5.4:61050591-61050610 MS.gene041982:intron 55.0%
! AAGGTGCTATAGCGCCTCCT+GGG - chr5.4:61051380-61051399 None:intergenic 55.0%
!! ACCGGGTTTGTGCTGCTTCA+AGG + chr5.4:61052117-61052136 MS.gene041982:intron 55.0%
!! CTGGGTAGCGGACAGGTTAA+CGG - chr5.4:61051362-61051381 None:intergenic 55.0%
ACAAAGGGCTCATGCGAGGG+TGG + chr5.4:61053723-61053742 MS.gene041982:CDS 60.0%
ATAAACAGCGTGGGCCGGAC+CGG - chr5.4:61049966-61049985 None:intergenic 60.0%
CAAAGGGCTCATGCGAGGGT+GGG + chr5.4:61053724-61053743 MS.gene041982:CDS 60.0%
CGGCATATCGAAGCGGACGT+TGG - chr5.4:61051451-61051470 None:intergenic 60.0%
CGTTAACCTGTCCGCTACCC+AGG + chr5.4:61051360-61051379 MS.gene041982:intron 60.0%
CTATAGCGCCTCCTGGGTAG+CGG - chr5.4:61051374-61051393 None:intergenic 60.0%
GCCGATACCGCGGTATAAGG+CGG - chr5.4:61049927-61049946 None:intergenic 60.0%
GCCTGCCATTGCAGCACCAT+AGG + chr5.4:61052662-61052681 MS.gene041982:intron 60.0%
GTATAAGGCGGACGGGCCTT+CGG - chr5.4:61049915-61049934 None:intergenic 60.0%
TAACCTGTCCGCTACCCAGG+AGG + chr5.4:61051363-61051382 MS.gene041982:intron 60.0%
TACCGCGGTATAAGGCGGAC+GGG - chr5.4:61049922-61049941 None:intergenic 60.0%
TCGTGGGCCATCGACAACAC+CGG + chr5.4:61052736-61052755 MS.gene041982:intron 60.0%
TGACGCGGTGTTTACGCCGA+TGG + chr5.4:61050084-61050103 MS.gene041982:CDS 60.0%
TGCTCCTTCTCGGTCAAGGG+TGG - chr5.4:61052340-61052359 None:intergenic 60.0%
TGTGGCAGCGAGGTTGAGCA+CGG - chr5.4:61052366-61052385 None:intergenic 60.0%
TGTTCATGCTACTGCCGGGG+CGG + chr5.4:61050333-61050352 MS.gene041982:CDS 60.0%
! AGACCAGCAGATAGCGGCTG+CGG - chr5.4:61053774-61053793 None:intergenic 60.0%
! AGACCGTCGTGAGTTGACGG+CGG - chr5.4:61049734-61049753 None:intergenic 60.0%
! CAAGGTGCTATAGCGCCTCC+TGG - chr5.4:61051381-61051400 None:intergenic 60.0%
! TCATGCGAGGGTGGGTTCCA+AGG + chr5.4:61053732-61053751 MS.gene041982:CDS 60.0%
! TGCGCCGATACCGCGGTATA+AGG - chr5.4:61049930-61049949 None:intergenic 60.0%
! TGGTTCGGGGGTTTGTGCCA+CGG + chr5.4:61050054-61050073 MS.gene041982:CDS 60.0%
!! ATACCGCGGTATCGGCGCAA+TGG + chr5.4:61049931-61049950 MS.gene041982:CDS 60.0%
!! GCCTATGGTGCTGCAATGGC+AGG - chr5.4:61052666-61052685 None:intergenic 60.0%
!! TACCGCGGTATCGGCGCAAT+GGG + chr5.4:61049932-61049951 MS.gene041982:CDS 60.0%
!! TGCGGCCTATGGTGCTGCAA+TGG - chr5.4:61052670-61052689 None:intergenic 60.0%
TTCGGGGGTTTGTGCCACGG+TGG + chr5.4:61050057-61050076 MS.gene041982:CDS 65.0%
! GACCAGCAGATAGCGGCTGC+GGG - chr5.4:61053773-61053792 None:intergenic 65.0%
! GACGTTGGCCGCGCTGGTAA+TGG - chr5.4:61051436-61051455 None:intergenic 65.0%
!! AATGGGCCTTGGTGCCGGTC+CGG + chr5.4:61049949-61049968 MS.gene041982:CDS 65.0%
!! GGTATCGGCGCAATGGGCCT+TGG + chr5.4:61049938-61049957 MS.gene041982:CDS 65.0%
CTCCCGCAGCCGCTATCTGC+TGG + chr5.4:61053768-61053787 MS.gene041982:CDS 70.0%
GCGCCGCCGTCAACTCACGA+CGG + chr5.4:61049728-61049747 MS.gene041982:CDS 70.0%
GGCCCGTCCGCCTTATACCG+CGG + chr5.4:61049917-61049936 MS.gene041982:CDS 70.0%
TGCCACGGTGGCGAGTGACG+CGG + chr5.4:61050069-61050088 MS.gene041982:CDS 70.0%
! GGCCCATTGCGCCGATACCG+CGG - chr5.4:61049937-61049956 None:intergenic 70.0%
! GGCGCAATGGGCCTTGGTGC+CGG + chr5.4:61049944-61049963 MS.gene041982:CDS 70.0%
! TCGTGAGTTGACGGCGGCGC+CGG - chr5.4:61049728-61049747 None:intergenic 70.0%
CAACCCACCAGCAGCCGCCC+CGG - chr5.4:61050350-61050369 None:intergenic 75.0%
CACCGCGTCACTCGCCACCG+TGG - chr5.4:61050074-61050093 None:intergenic 75.0%
GAAGCGGACGTTGGCCGCGC+TGG - chr5.4:61051442-61051461 None:intergenic 75.0%
!! GCGCCTCCTGGGTAGCGGAC+AGG - chr5.4:61051369-61051388 None:intergenic 75.0%
! ACTGCCGGGGCGGCTGCTGG+TGG + chr5.4:61050343-61050362 MS.gene041982:CDS 80.0%
! CGTGGGCCGGACCGGCACCA+AGG - chr5.4:61049958-61049977 None:intergenic 80.0%
! CTGCCGGGGCGGCTGCTGGT+GGG + chr5.4:61050344-61050363 MS.gene041982:CDS 80.0%
! GCTACTGCCGGGGCGGCTGC+TGG + chr5.4:61050340-61050359 MS.gene041982:CDS 80.0%
!! CGGGGCGGCTGCTGGTGGGT+TGG + chr5.4:61050348-61050367 MS.gene041982:CDS 80.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 61049659 61053862 61049659 ID=MS.gene041982
chr5.4 mRNA 61049659 61053862 61049659 ID=MS.gene041982.t1;Parent=MS.gene041982
chr5.4 exon 61049659 61050423 61049659 ID=MS.gene041982.t1.exon1;Parent=MS.gene041982.t1
chr5.4 CDS 61049659 61050423 61049659 ID=cds.MS.gene041982.t1;Parent=MS.gene041982.t1
chr5.4 exon 61053647 61053862 61053647 ID=MS.gene041982.t1.exon2;Parent=MS.gene041982.t1
chr5.4 CDS 61053647 61053862 61053647 ID=cds.MS.gene041982.t1;Parent=MS.gene041982.t1
Gene Sequence

>MS.gene041982

ATGGCCACAGAAGCAAGAACAAAGTTTCAAAACCCAGATTACCGACCCGATTTCACAAACTTAACGCCGGCGCCGCCGTCAACTCACGACGGTCTTCACTACTGGCAATTCATGATTTCTGGATCCATTGCTGGTTGTATCGAACACATGGCAATGTTTCCCGTTGACACCGTTAAAACTCACATGCAAGCCATCACATCTTGTCCAATTAAATCCGTTTCCGTCAGTCAAGCTCTTCGGTCAATCTTAAAATCCGAAGGCCCGTCCGCCTTATACCGCGGTATCGGCGCAATGGGCCTTGGTGCCGGTCCGGCCCACGCTGTTTATTTCTCAGTTTATGAAACCCTTAAAAAGAAATTCTCACATGGAAATGTTAGTGATCATTTTGTTCATGCTGGTTCGGGGGTTTGTGCCACGGTGGCGAGTGACGCGGTGTTTACGCCGATGGATATGGTGAAACAGAGGTTGCAGTTGAGTAATAGTGGTTATAAGGGTGTTTTTGATTGTGTGAAGAGGGTTTTGAGTGAGGAAGGGTTTGGTGCTTTTTATGCTAGTTATAGGACTACTGTTTTGATGAATGCGCCTTTTACTGCTGTGCATTTCGCGACTTATGAAGCTGCGAAAAGAGGGTTGAATGAGATTTCTCCAGAGAGTGTTGATGATGAGAGGTTGATTGTTCATGCTACTGCCGGGGCGGCTGCTGGTGGGTTGGCTGCTGCTGTTACTACGCCGCTTGATGTTGTTAAAACTCAATTGCAATGCCAGGTATAGCTATGACAACAATAGTAGTAATGATAATTTGTTGATTTTGAATTATAGCTATGATAATAATAGTAGTAACGATAATTTGTTGATTTTGAATTGCTTAGCTATAGTACTTGCCTTTAAAGTTTAGCATATGAACAAATTAACTATGTGCTCTTTTAATGAATTTGGGCCTTCTGCGCTTATGTGGTATATTCCTGTGTTTGTGACTTGTGAATGGAACAATGCTGTTAAATAGCCCCTATAGTGTAGTGTAATTTGAACAATTTGCTAGTCCTATGATATTGTCAAATAGCAACTCTAGCATTAAACATTTATAAATCAAAACTCAAGCCTTAATCAAAGCAGATGTCTTAATCAAAACATTACATTCTATTCCCAATGCCAATAACAGAGAAAGAGAACAGAACGGAGATGACAAATGAAAGAAAATGAAAACAGAATACAAAGAAAGAAAGAGAGATAACGTACAACAAAACAGAGTTGAGAGATGAAAGAAAACATAACAGAACAAAGAAAGAACGCGTAAAAGAGAACATAGAACTGAAAGAAATAACACAAAAGAGAACATAACATAGCCCTAAAAATAACCTAAAAGAAATAAAGAAAAGAACATGTATTACTGAAAGAAAGAAAACGCAAAACAGAACATAAAGAGAAGAGAAATGAGAGAGCGTAGAAAGAAGAACCTTTGACTGATGGCTGAGAGAAGTTTTGTTGTGCAATGGCTGGGAGAAGTTTTGTTGTGGAATGAAATTTTTTTGGGTTTTGTTTTGCCATGGCTGGGAGTGAAAAGACAATGGAACAGTTACTAAACTGTGAGAAGAGGGAAAAGGGTTAGGGATAATCCTAGATCCCCAAATTTCCCTAGAAACGGTTTAAAATTTAGGGTCTATTTGATGTTTTCACATTTGAACACAGTAGTGGATCAGAGACCGTTAACCTGTCCGCTACCCAGGAGGCGCTATAGCACCTTGAGCAGCTGCTATTGCGAACTTCTCTGCTATGGCCATTACCAGCGCGGCCAACGTCCGCTTCGATATGCCGCTATATCGCGCTATTAACTACCTAGGTTTGGTTGTCATTTTCATTGATTATCAAGCTTCTGTTTTGAGAATGTGAGTTCCATAGGCAAACTCTTTGTGCTTATGTGGGGATTCCACGTTTGTCACGACAGTGTGCGAAAAACGTGAAGCAAATGATATTAGTAGGGCTTTAATTGGTAGGGTATTACAAATATAAGGTTGGATAGTTGTAGAGTTATGGGTTGGGTAGTTCAAGTCAAACTATTACGAGAGATTTGGAGTTAAATAGTTTTTTATATTTACATATGATTCATTATAAGATGTTATGGTGTTGTTAGATTTGATCTATGTAGTTGACCATCCTAAGTTGAAAAAGATTTTTGTTATTCTTGTTGGTGTGTTGTTGAAATGGTTAGGGAATGGTTTTGAAAAATTAGGGGGAACAATTTTCTCTTAAGTAGTTTTATTGTAATTTTGTTGTTTGAACCAATGGTGTCAATTTTATATGTAGCTATTCCCTATCTATTTTATAGGGCTTTTTTGTTAAATTGGAATTCATAATATATGTTGAGGGGATGGCTAAAACTTAAAGGTGGCCTGAGTGTGATTTTATGCGACTGAATGGGGATCAAAACACAGCCTTAGGTGCCCCAACATGAAGTTTTGGTACCGGGTTTGTGCTGCTTCAAGGTGCAGATATGTTAGATAAGATTGCAGACTGCAGAGAGTTTGGGTGCTGTTATGATGATAGGAACCAAGTGCAGAATGCACAAATCCCCTGTTACTGCCTAATTCCAGAACTGTATAGGAATTGACATAATAATGAAGCTGGAGCAGTACTCCTTACAAGATGGAGGAAAACATATAATGCCTAAGAAAAAATATATTCCACCCTTGACCGAGAAGGAGCAGATCCGTGCTCAACCTCGCTGCCACATTAAACCACCTTTTCCCACTTGATTCTTTCTTATCTCATACAAGAAGTTGGATCCTCTCATACATGCATCCCTCTCCAACAAAAAGAATGAGAGTGGGAAGAGGGAGAAGATGAGGGAAATGAGGAGTTGATATGGTGAGAGAGAAATGAAATGTTGTGCAGTGATGTAGAAATTTTTTGTGAGAGCGCGAAGTGTTGTTAAATGGTGTTGCACCCCTATGGCAGAATGCTGTGGTGGATTTTTTGACAACTGCGATGGTCAGTTTGTGAAATGATGCCTGCCATTGCAGCACCATAGGCCGCAGTGTTCTGTTTGTGCAGCGGATTTTTGGCCTTCCCCCATATTCTTGTCGTGGGCCATCGACAACACCGGAGAGAATCCAAACTTATCAAGGAAAATGCATGGTATATTGTACACACACATGCACACATCAGTTAAATATCCTATCAAAAATCGTAAAACTTTATCGTTGAAAATAATAATTGATTGCTAATAAGTAACACCTTTCAGTACTAGTTTAGATAGAAGCATGATATATCACATATATGATATATATGCCAGTTATGAGAGAGAGAGAAATAAATACAGGGTGATATTATATAATGAACTACAAATTGTTTACTACTCAAATAGGATAATTAACAGACTAGTTGTGAGTAGCATATTATTTATTTTTCAGTACTATTTACAGGCATGAAATTTTACATATATGTATGCCATTGGTTAACAGAATTGTTGATTTTTGTCGGAAATGACCAACTAAAGTAAAGTTAGGGGACCAAAACAGAACAAAGAATAATTGTGCAACTGAGTGAAACCACAAAATTAGTTAAGGGACCAAATGTGTAATTTAACCTAATATTTTCTGATCAAACGAAAAGGTTTTAAATCTGATTAGGATTATTTGTTATTTTTTGTTGGAGCATTATGGTGTTGTTTGATTCATGTGGTTACTAGTCACTCCACTGTCTGAAAATAATTGTTACTGTTGTCATATTGTTTGATATGGTCTATGGTGTTTGATCAAGGTGTTATTTTATTTTATTTTTTGACTCAAGATGTTATTTTATTTGGAACTTGATTGTTCTGCAACTTTTATTATACGAATGTTTGGTATCCTTGGGTTTGACAATGATTCTAAATCTTTTTTAAAAATATTAAAGAATGATTGTAAATGAAGGGGAATTAGACAACAACTTTTTTAATCCCTATCTTTTCTCTCGTTGGAGAATTGATCTTAACATTGGATTCATGGTGCAGGGTGTGTGTGGATGTGATAGGTTCAAAAGTGGTTCCATTGGCGATGTTGTTAAAACAATAGTGAAAAAGGACGGATACAAAGGGCTCATGCGAGGGTGGGTTCCAAGGATGCTCTTTCATGCTCCCGCAGCCGCTATCTGCTGGTCTACATATGAAGCTGGAAAATCCTTTTTCCAAGATTACAACGAGCAGAAAGATTCTGGAACTGTCACCTAA
Protein sequence

>MS.gene041982.t1

MATEARTKFQNPDYRPDFTNLTPAPPSTHDGLHYWQFMISGSIAGCIEHMAMFPVDTVKTHMQAITSCPIKSVSVSQALRSILKSEGPSALYRGIGAMGLGAGPAHAVYFSVYETLKKKFSHGNVSDHFVHAGSGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVFDCVKRVLSEEGFGAFYASYRTTVLMNAPFTAVHFATYEAAKRGLNEISPESVDDERLIVHATAGAAAGGLAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVVKTIVKKDGYKGLMRGWVPRMLFHAPAAAICWSTYEAGKSFFQDYNEQKDSGTVT