Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070056.t1 | XP_003616573.1 | 99.1 | 336 | 2 | 1 | 1 | 335 | 1 | 336 | 5.00E-178 | 633.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070056.t1 | O04200 | 72.8 | 327 | 84 | 2 | 1 | 323 | 1 | 326 | 5.4e-128 | 458.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070056.t1 | G7KBX5 | 99.1 | 336 | 2 | 1 | 1 | 335 | 1 | 336 | 3.6e-178 | 633.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049807 | MS.gene070056 | 0.805143 | 1.54E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene070056 | 0.822944 | 1.81E-53 | -1.69E-46 |
| MS.gene054178 | MS.gene070056 | 0.818343 | 2.06E-52 | -1.69E-46 |
| MS.gene055229 | MS.gene070056 | 0.809446 | 1.89E-50 | -1.69E-46 |
| MS.gene059778 | MS.gene070056 | 0.81202 | 5.23E-51 | -1.69E-46 |
| MS.gene061100 | MS.gene070056 | 0.832944 | 7.08E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene041982 | MS.gene070056 | PPI |
| MS.gene37414 | MS.gene070056 | PPI |
| MS.gene015005 | MS.gene070056 | PPI |
| MS.gene070056 | MS.gene35887 | PPI |
| MS.gene070056 | MS.gene32803 | PPI |
| MS.gene070056 | MS.gene009772 | PPI |
| MS.gene070056 | MS.gene50236 | PPI |
| MS.gene066511 | MS.gene070056 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070056.t1 | MTR_5g081910 | 99.107 | 336 | 2 | 1 | 1 | 335 | 1 | 336 | 0.0 | 676 |
| MS.gene070056.t1 | MTR_5g081910 | 98.394 | 249 | 3 | 1 | 88 | 335 | 14 | 262 | 3.25e-177 | 491 |
| MS.gene070056.t1 | MTR_1g036280 | 56.193 | 331 | 110 | 5 | 21 | 316 | 23 | 353 | 5.94e-124 | 360 |
| MS.gene070056.t1 | MTR_1g036280 | 50.204 | 245 | 87 | 5 | 21 | 230 | 23 | 267 | 5.90e-76 | 234 |
| MS.gene070056.t1 | MTR_8g076760 | 28.803 | 309 | 171 | 10 | 23 | 316 | 29 | 303 | 9.50e-34 | 126 |
| MS.gene070056.t1 | MTR_7g109135 | 29.560 | 318 | 182 | 9 | 5 | 314 | 19 | 302 | 3.49e-32 | 122 |
| MS.gene070056.t1 | MTR_1g105410 | 26.048 | 334 | 197 | 5 | 3 | 322 | 6 | 303 | 2.90e-30 | 117 |
| MS.gene070056.t1 | MTR_7g109135 | 27.744 | 328 | 184 | 10 | 5 | 320 | 19 | 305 | 1.27e-27 | 110 |
| MS.gene070056.t1 | MTR_1g087840 | 27.759 | 299 | 174 | 9 | 24 | 314 | 35 | 299 | 2.95e-26 | 106 |
| MS.gene070056.t1 | MTR_7g109135 | 28.261 | 276 | 160 | 8 | 63 | 335 | 1 | 241 | 3.54e-25 | 102 |
| MS.gene070056.t1 | MTR_5g055410 | 26.667 | 315 | 195 | 6 | 24 | 333 | 37 | 320 | 1.15e-24 | 102 |
| MS.gene070056.t1 | MTR_5g039730 | 27.381 | 336 | 188 | 6 | 3 | 322 | 6 | 301 | 3.59e-23 | 98.2 |
| MS.gene070056.t1 | MTR_3g104600 | 27.723 | 303 | 197 | 8 | 9 | 308 | 36 | 319 | 9.54e-23 | 97.4 |
| MS.gene070056.t1 | MTR_7g109135 | 30.303 | 231 | 129 | 7 | 108 | 335 | 19 | 220 | 2.62e-22 | 93.6 |
| MS.gene070056.t1 | MTR_3g098460 | 26.038 | 265 | 159 | 8 | 54 | 314 | 245 | 476 | 5.98e-18 | 84.7 |
| MS.gene070056.t1 | MTR_2g436930 | 23.143 | 350 | 206 | 8 | 4 | 322 | 11 | 328 | 9.34e-18 | 83.2 |
| MS.gene070056.t1 | MTR_8g096050 | 26.692 | 266 | 158 | 9 | 53 | 314 | 266 | 498 | 1.84e-17 | 83.6 |
| MS.gene070056.t1 | MTR_4g012850 | 26.299 | 308 | 185 | 10 | 9 | 312 | 17 | 286 | 2.35e-17 | 81.6 |
| MS.gene070056.t1 | MTR_7g084400 | 26.616 | 263 | 153 | 8 | 56 | 314 | 255 | 481 | 6.12e-17 | 82.0 |
| MS.gene070056.t1 | MTR_8g066975 | 26.300 | 327 | 205 | 9 | 1 | 322 | 1 | 296 | 7.95e-17 | 80.1 |
| MS.gene070056.t1 | MTR_3g107510 | 21.895 | 306 | 196 | 6 | 9 | 312 | 123 | 387 | 2.26e-16 | 79.7 |
| MS.gene070056.t1 | MTR_4g005330 | 25.079 | 315 | 191 | 15 | 9 | 312 | 1 | 281 | 7.90e-16 | 77.0 |
| MS.gene070056.t1 | MTR_4g005330 | 25.079 | 315 | 191 | 15 | 9 | 312 | 67 | 347 | 8.99e-16 | 77.8 |
| MS.gene070056.t1 | MTR_1g090330 | 23.675 | 283 | 181 | 8 | 15 | 293 | 21 | 272 | 9.30e-16 | 77.0 |
| MS.gene070056.t1 | MTR_4g119770 | 22.284 | 359 | 204 | 9 | 1 | 321 | 7 | 328 | 9.97e-16 | 77.4 |
| MS.gene070056.t1 | MTR_1g012030 | 20.588 | 306 | 200 | 6 | 9 | 312 | 140 | 404 | 4.86e-15 | 75.9 |
| MS.gene070056.t1 | MTR_6g091800 | 23.397 | 312 | 214 | 7 | 9 | 319 | 20 | 307 | 2.75e-14 | 72.8 |
| MS.gene070056.t1 | MTR_5g030530 | 25.532 | 329 | 205 | 11 | 1 | 322 | 1 | 296 | 1.03e-13 | 70.9 |
| MS.gene070056.t1 | MTR_7g064980 | 24.910 | 277 | 168 | 8 | 53 | 324 | 75 | 316 | 2.01e-13 | 70.5 |
| MS.gene070056.t1 | MTR_6g091800 | 23.926 | 326 | 219 | 8 | 9 | 319 | 20 | 331 | 2.01e-13 | 70.5 |
| MS.gene070056.t1 | MTR_8g092080 | 24.768 | 323 | 176 | 9 | 9 | 328 | 53 | 311 | 3.25e-13 | 69.7 |
| MS.gene070056.t1 | MTR_7g445250 | 26.740 | 273 | 147 | 5 | 3 | 262 | 6 | 238 | 5.68e-13 | 68.2 |
| MS.gene070056.t1 | MTR_7g039810 | 26.740 | 273 | 147 | 5 | 3 | 262 | 6 | 238 | 8.08e-13 | 67.8 |
| MS.gene070056.t1 | MTR_5g009500 | 25.000 | 332 | 201 | 11 | 9 | 319 | 39 | 343 | 8.89e-13 | 68.6 |
| MS.gene070056.t1 | MTR_2g102010 | 21.935 | 310 | 189 | 10 | 9 | 308 | 18 | 284 | 4.78e-12 | 66.2 |
| MS.gene070056.t1 | MTR_4g119770 | 28.500 | 200 | 116 | 8 | 119 | 308 | 18 | 200 | 5.42e-12 | 65.5 |
| MS.gene070056.t1 | MTR_1g097890 | 23.476 | 328 | 186 | 11 | 4 | 328 | 46 | 311 | 5.51e-12 | 66.2 |
| MS.gene070056.t1 | MTR_8g027975 | 25.075 | 335 | 199 | 12 | 9 | 319 | 52 | 358 | 2.89e-11 | 64.3 |
| MS.gene070056.t1 | MTR_6g091800 | 23.529 | 306 | 205 | 8 | 9 | 299 | 20 | 311 | 3.69e-11 | 63.5 |
| MS.gene070056.t1 | MTR_4g057850 | 24.290 | 317 | 197 | 11 | 6 | 315 | 20 | 300 | 4.34e-11 | 63.5 |
| MS.gene070056.t1 | MTR_3g104500 | 21.474 | 312 | 207 | 8 | 9 | 312 | 35 | 316 | 5.54e-11 | 63.2 |
| MS.gene070056.t1 | MTR_6g034145 | 22.761 | 268 | 185 | 6 | 53 | 319 | 7 | 253 | 5.90e-11 | 62.4 |
| MS.gene070056.t1 | MTR_7g068340 | 29.139 | 151 | 89 | 4 | 184 | 333 | 139 | 272 | 7.23e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070056.t1 | AT2G39970 | 72.783 | 327 | 84 | 2 | 1 | 323 | 1 | 326 | 4.81e-163 | 458 |
| MS.gene070056.t1 | AT5G66380 | 30.952 | 336 | 181 | 10 | 7 | 329 | 9 | 306 | 4.87e-38 | 138 |
| MS.gene070056.t1 | AT2G47490 | 27.987 | 318 | 180 | 9 | 24 | 332 | 33 | 310 | 2.78e-32 | 122 |
| MS.gene070056.t1 | AT1G25380 | 27.215 | 316 | 188 | 8 | 24 | 332 | 37 | 317 | 1.84e-29 | 116 |
| MS.gene070056.t1 | AT1G25380 | 27.215 | 316 | 188 | 8 | 24 | 332 | 37 | 317 | 1.84e-29 | 116 |
| MS.gene070056.t1 | AT3G05290 | 26.404 | 356 | 196 | 9 | 3 | 332 | 6 | 321 | 4.09e-27 | 108 |
| MS.gene070056.t1 | AT5G27520 | 27.746 | 346 | 176 | 12 | 3 | 322 | 8 | 305 | 3.00e-26 | 106 |
| MS.gene070056.t1 | AT4G26180 | 25.000 | 304 | 202 | 6 | 9 | 310 | 22 | 301 | 2.25e-18 | 85.1 |
| MS.gene070056.t1 | AT5G46800 | 26.586 | 331 | 202 | 10 | 1 | 322 | 1 | 299 | 2.37e-17 | 81.6 |
| MS.gene070056.t1 | AT5G46800 | 26.586 | 331 | 202 | 10 | 1 | 322 | 1 | 299 | 2.37e-17 | 81.6 |
| MS.gene070056.t1 | AT5G46800 | 26.586 | 331 | 202 | 10 | 1 | 322 | 1 | 299 | 2.37e-17 | 81.6 |
| MS.gene070056.t1 | AT1G14560 | 24.333 | 300 | 202 | 8 | 24 | 319 | 43 | 321 | 2.80e-17 | 81.6 |
| MS.gene070056.t1 | AT4G26180 | 25.087 | 287 | 189 | 6 | 9 | 293 | 22 | 284 | 7.60e-17 | 80.1 |
| MS.gene070056.t1 | AT5G48970 | 23.235 | 340 | 201 | 9 | 4 | 312 | 18 | 328 | 5.95e-16 | 78.2 |
| MS.gene070056.t1 | AT4G32400 | 27.805 | 205 | 113 | 5 | 9 | 212 | 209 | 379 | 8.23e-15 | 75.1 |
| MS.gene070056.t1 | AT1G14560 | 24.138 | 261 | 176 | 7 | 43 | 299 | 59 | 301 | 8.49e-15 | 74.3 |
| MS.gene070056.t1 | AT3G21390 | 22.515 | 342 | 206 | 9 | 1 | 312 | 12 | 324 | 9.35e-15 | 74.7 |
| MS.gene070056.t1 | AT3G20240 | 22.642 | 318 | 195 | 12 | 9 | 312 | 53 | 333 | 9.89e-15 | 74.7 |
| MS.gene070056.t1 | AT3G21390 | 22.714 | 339 | 203 | 9 | 4 | 312 | 37 | 346 | 1.26e-14 | 74.3 |
| MS.gene070056.t1 | AT1G14560 | 25.417 | 240 | 155 | 7 | 85 | 319 | 3 | 223 | 5.37e-14 | 70.9 |
| MS.gene070056.t1 | AT5G51050 | 26.518 | 313 | 178 | 13 | 9 | 314 | 224 | 491 | 6.39e-13 | 69.7 |
| MS.gene070056.t1 | AT4G39460 | 23.148 | 324 | 186 | 7 | 9 | 331 | 59 | 320 | 7.59e-13 | 68.9 |
| MS.gene070056.t1 | AT4G39460 | 23.148 | 324 | 186 | 7 | 9 | 331 | 59 | 320 | 7.59e-13 | 68.9 |
| MS.gene070056.t1 | AT4G39460 | 23.148 | 324 | 186 | 7 | 9 | 331 | 59 | 320 | 7.59e-13 | 68.9 |
| MS.gene070056.t1 | AT1G14140 | 22.535 | 284 | 182 | 9 | 16 | 293 | 24 | 275 | 1.14e-12 | 68.2 |
| MS.gene070056.t1 | AT5G61810 | 22.186 | 311 | 189 | 9 | 9 | 314 | 66 | 328 | 4.86e-12 | 66.6 |
| MS.gene070056.t1 | AT4G01100 | 24.779 | 339 | 185 | 14 | 9 | 314 | 43 | 344 | 6.21e-12 | 66.2 |
| MS.gene070056.t1 | AT5G61810 | 22.186 | 311 | 189 | 9 | 9 | 314 | 209 | 471 | 7.07e-12 | 66.6 |
| MS.gene070056.t1 | AT4G01100 | 24.490 | 294 | 176 | 9 | 43 | 314 | 25 | 294 | 1.44e-11 | 64.7 |
| MS.gene070056.t1 | AT5G58970 | 24.290 | 317 | 190 | 12 | 9 | 314 | 17 | 294 | 2.41e-11 | 64.3 |
| MS.gene070056.t1 | AT3G55640 | 22.699 | 326 | 199 | 10 | 2 | 314 | 36 | 321 | 2.50e-11 | 64.3 |
| MS.gene070056.t1 | AT3G55640 | 22.699 | 326 | 199 | 10 | 2 | 314 | 36 | 321 | 2.50e-11 | 64.3 |
| MS.gene070056.t1 | AT2G37890 | 23.053 | 321 | 212 | 8 | 7 | 321 | 44 | 335 | 3.57e-11 | 63.9 |
| MS.gene070056.t1 | AT1G79900 | 22.449 | 294 | 177 | 8 | 23 | 312 | 31 | 277 | 5.67e-11 | 63.2 |
| MS.gene070056.t1 | AT4G01100 | 23.235 | 340 | 203 | 11 | 9 | 314 | 43 | 358 | 6.29e-11 | 63.2 |
Find 73 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAACACTTTGTACAATTT+TGG | 0.182689 | 5.3:+66310387 | None:intergenic |
| ATTATTTCTATCAAATATTC+AGG | 0.250418 | 5.3:-66312984 | MS.gene070056:CDS |
| ATCCGCTATGAAGGGTTTAA+TGG | 0.255735 | 5.3:-66310430 | MS.gene070056:CDS |
| CTTATTGTTGCTGCTTTATC+CGG | 0.280236 | 5.3:-66312886 | MS.gene070056:CDS |
| TTATGACGAGGCTGGAGTTT+TGG | 0.300723 | 5.3:-66311613 | MS.gene070056:CDS |
| ACTGTTGAGCCCCTTGCTTA+TGG | 0.318517 | 5.3:-66312534 | MS.gene070056:CDS |
| GACAAGAGACACAATTATAA+AGG | 0.344865 | 5.3:-66310957 | MS.gene070056:intron |
| ACCTTTGACTTTAAAGTGTT+GGG | 0.364126 | 5.3:+66310292 | None:intergenic |
| GAGGGATGGGAGAGGTTGTA+TGG | 0.373207 | 5.3:-66315447 | MS.gene070056:CDS |
| GCATCTGACAACCTCGGATC+AGG | 0.389004 | 5.3:+66312579 | None:intergenic |
| TGCTGTTGACAAATCCGATA+TGG | 0.396037 | 5.3:-66312768 | MS.gene070056:CDS |
| ATGTCGGACGCTTTGATCAA+TGG | 0.399669 | 5.3:-66316356 | MS.gene070056:CDS |
| AACCTTTGACTTTAAAGTGT+TGG | 0.408530 | 5.3:+66310291 | None:intergenic |
| TGTAACTAGATATTTCTTCT+CGG | 0.409927 | 5.3:-66311277 | MS.gene070056:intron |
| CTCGGAGCTGTCGCTAAGCT+TGG | 0.413175 | 5.3:-66311259 | MS.gene070056:CDS |
| AGATTCTTATTGCCCTTCTT+CGG | 0.413495 | 5.3:+66316146 | None:intergenic |
| TACAGCATGAACTGTATAGA+AGG | 0.422667 | 5.3:+66311476 | None:intergenic |
| TAGTAGCGTAACTGCTTTAG+AGG | 0.422674 | 5.3:-66311417 | MS.gene070056:intron |
| AAGAAGGGCAATAAGAATCT+TGG | 0.440862 | 5.3:-66316143 | MS.gene070056:CDS |
| ATCAATGGATTGGCTGGAGC+TGG | 0.443957 | 5.3:-66316341 | MS.gene070056:CDS |
| AGAAAGTGATGTTTGTTCAA+TGG | 0.455914 | 5.3:+66312557 | None:intergenic |
| GGATTGGCTGGAGCTGGTGG+AGG | 0.464570 | 5.3:-66316335 | MS.gene070056:CDS |
| GCTTTGATCAATGGATTGGC+TGG | 0.469248 | 5.3:-66316347 | MS.gene070056:CDS |
| ATTAAGATGATCCGCTATGA+AGG | 0.474624 | 5.3:-66310439 | MS.gene070056:CDS |
| GGCTTGGCGCCATCACTTGT+CGG | 0.475838 | 5.3:-66315423 | MS.gene070056:CDS |
| CGAGTAACAACTAGCCATAT+CGG | 0.481205 | 5.3:+66312754 | None:intergenic |
| TCCCAACACTTTAAAGTCAA+AGG | 0.492946 | 5.3:-66310293 | MS.gene070056:CDS |
| GAAAATCATACGGTTTGAAG+AGG | 0.498095 | 5.3:+66316287 | None:intergenic |
| GGACGCTTTGATCAATGGAT+TGG | 0.498413 | 5.3:-66316351 | MS.gene070056:CDS |
| AACTGATCGTGATCCGAAGA+AGG | 0.505218 | 5.3:-66316159 | MS.gene070056:CDS |
| GGCAGTGGTGATGGATCAGT+TGG | 0.507558 | 5.3:-66312922 | MS.gene070056:CDS |
| CTATCCTCTTCTTGTTGTGA+AGG | 0.508862 | 5.3:-66311221 | MS.gene070056:intron |
| GGAGAGGTTGTATGGAGGCT+TGG | 0.511587 | 5.3:-66315439 | MS.gene070056:CDS |
| CAAGAAGTTTATGACGAGGC+TGG | 0.515817 | 5.3:-66311621 | MS.gene070056:CDS |
| AATGGATTGGCTGGAGCTGG+TGG | 0.518922 | 5.3:-66316338 | MS.gene070056:CDS |
| GGTTGTGAAACAAGAGGGAT+GGG | 0.523770 | 5.3:-66315460 | MS.gene070056:CDS |
| TGTCGGTACAGCTACATCTC+AGG | 0.524615 | 5.3:-66315406 | MS.gene070056:intron |
| TTATTGTTGCTGCTTTATCC+GGG | 0.526799 | 5.3:-66312885 | MS.gene070056:intron |
| GGGAACATTCTTTGCAAGCA+AGG | 0.534911 | 5.3:+66310312 | None:intergenic |
| CATGCTGTATGAAACCTTGT+TGG | 0.535971 | 5.3:-66311462 | MS.gene070056:CDS |
| AGGTTGTGAAACAAGAGGGA+TGG | 0.541422 | 5.3:-66315461 | MS.gene070056:CDS |
| CATGGCTAGTTCCATAAGCA+AGG | 0.545272 | 5.3:+66312523 | None:intergenic |
| GCTAGTTGTTACTCGTATGC+AGG | 0.548103 | 5.3:-66312746 | MS.gene070056:intron |
| ATGAGACTAGGCAGTGGTGA+TGG | 0.550388 | 5.3:-66312931 | MS.gene070056:CDS |
| CAACGTACCATGACCAATGT+TGG | 0.557142 | 5.3:+66311570 | None:intergenic |
| TTCTTCAAATTCAGGTACAC+AGG | 0.560566 | 5.3:-66310470 | MS.gene070056:intron |
| GGATGGGAGAGGTTGTATGG+AGG | 0.563808 | 5.3:-66315444 | MS.gene070056:CDS |
| TGAAACAAGAGGGATGGGAG+AGG | 0.572625 | 5.3:-66315455 | MS.gene070056:CDS |
| GATTGGCTGGAGCTGGTGGA+GGG | 0.575191 | 5.3:-66316334 | MS.gene070056:CDS |
| CTTCACAACAAGAAGAGGAT+AGG | 0.584063 | 5.3:+66311222 | None:intergenic |
| TTAAGATGATCCGCTATGAA+GGG | 0.584087 | 5.3:-66310438 | MS.gene070056:CDS |
| TATACCTTCACAACAAGAAG+AGG | 0.596824 | 5.3:+66311217 | None:intergenic |
| ATGGCTAGTTCCATAAGCAA+GGG | 0.597655 | 5.3:+66312524 | None:intergenic |
| CATCTGACAACCTCGGATCA+GGG | 0.605620 | 5.3:+66312580 | None:intergenic |
| ACTGATCGTGATCCGAAGAA+GGG | 0.613764 | 5.3:-66316158 | MS.gene070056:CDS |
| TGTATTACCAACATTGGTCA+TGG | 0.615271 | 5.3:-66311577 | MS.gene070056:intron |
| AAAATCATACGGTTTGAAGA+GGG | 0.617729 | 5.3:+66316288 | None:intergenic |
| GAAGGGTGTATTACCAACAT+TGG | 0.627201 | 5.3:-66311583 | MS.gene070056:CDS |
| GCACTAGAGAATATGAGACT+AGG | 0.631351 | 5.3:-66312943 | MS.gene070056:CDS |
| GAGAATATGAGACTAGGCAG+TGG | 0.634588 | 5.3:-66312937 | MS.gene070056:CDS |
| CAAGCTAGACAAGTTAACAA+TGG | 0.636088 | 5.3:-66310981 | MS.gene070056:CDS |
| GGAAAACTCTCCCTGATCCG+AGG | 0.640972 | 5.3:-66312590 | MS.gene070056:CDS |
| TCTCATATTCTCTAGTGCAG+CGG | 0.647711 | 5.3:+66312948 | None:intergenic |
| TAAAGCAGCAACAATAAGTG+AGG | 0.655236 | 5.3:+66312891 | None:intergenic |
| GTAGCTGTACCGACAAGTGA+TGG | 0.655326 | 5.3:+66315414 | None:intergenic |
| TGGCTAGTTCCATAAGCAAG+GGG | 0.670675 | 5.3:+66312525 | None:intergenic |
| ATTGTAGGTTGTGAAACAAG+AGG | 0.675879 | 5.3:-66315466 | MS.gene070056:intron |
| ATCCATTAAACCCTTCATAG+CGG | 0.697028 | 5.3:+66310428 | None:intergenic |
| TTGTAGGTTGTGAAACAAGA+GGG | 0.697405 | 5.3:-66315465 | MS.gene070056:intron |
| TGCTTATGGAACTAGCCATG+TGG | 0.711885 | 5.3:-66312520 | MS.gene070056:intron |
| GATTCAAGAAGTTTATGACG+AGG | 0.713067 | 5.3:-66311625 | MS.gene070056:CDS |
| AGACGCATAGAAAAGAGTCG+AGG | 0.730418 | 5.3:-66312611 | MS.gene070056:CDS |
| TCAATGGCATCTGACAACCT+CGG | 0.745050 | 5.3:+66312573 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATTTATCAATTAGAAT+AGG | - | chr5.3:66314611-66314630 | MS.gene070056:intron | 10.0% |
| !! | TATATATAAAGAAATTGAAT+AGG | + | chr5.3:66313588-66313607 | None:intergenic | 10.0% |
| !!! | TCTTTTATTTTTGTTATATT+GGG | - | chr5.3:66311118-66311137 | MS.gene070056:intron | 10.0% |
| !!! | TTCTTTTATTTTTGTTATAT+TGG | - | chr5.3:66311117-66311136 | MS.gene070056:intron | 10.0% |
| !! | AAAATTGCAGAAATTAAAAA+AGG | + | chr5.3:66313618-66313637 | None:intergenic | 15.0% |
| !! | AAATTGCAGAAATTAAAAAA+GGG | + | chr5.3:66313617-66313636 | None:intergenic | 15.0% |
| !! | ATTGAAATCAATCAATATAT+AGG | - | chr5.3:66311481-66311500 | MS.gene070056:CDS | 15.0% |
| !! | ATTTATATATCAATCAGTTT+AGG | - | chr5.3:66314818-66314837 | MS.gene070056:intron | 15.0% |
| !! | TAAAGTTCAATAAATTCATT+GGG | - | chr5.3:66312212-66312231 | MS.gene070056:intron | 15.0% |
| !! | TCATTATTCTTAAAAACATA+AGG | - | chr5.3:66315543-66315562 | MS.gene070056:intron | 15.0% |
| !! | TTAAAGTTCAATAAATTCAT+TGG | - | chr5.3:66312211-66312230 | MS.gene070056:intron | 15.0% |
| !! | TTTATATCATATTCTAATAG+AGG | + | chr5.3:66313944-66313963 | None:intergenic | 15.0% |
| !!! | ATTATTTCTATCAAATATTC+AGG | - | chr5.3:66313657-66313676 | MS.gene070056:intron | 15.0% |
| !!! | TTTTTAAAGCAAAGATTATA+CGG | + | chr5.3:66314700-66314719 | None:intergenic | 15.0% |
| !! | AAAGTTCAATAAATTCATTG+GGG | - | chr5.3:66312213-66312232 | MS.gene070056:intron | 20.0% |
| !! | AATAACCTTCTACAATAATA+CGG | + | chr5.3:66312117-66312136 | None:intergenic | 20.0% |
| !! | AATTGCAGAAATTAAAAAAG+GGG | + | chr5.3:66313616-66313635 | None:intergenic | 20.0% |
| !! | ACTAACATTGTTCAATTTAA+GGG | + | chr5.3:66311385-66311404 | None:intergenic | 20.0% |
| !! | AGTTGAACAATAAATTTAAG+TGG | + | chr5.3:66310896-66310915 | None:intergenic | 20.0% |
| !! | ATAATCTATGATAACTCAAT+AGG | + | chr5.3:66313442-66313461 | None:intergenic | 20.0% |
| !! | ATCAATCTTGCTAAAAAAAT+GGG | - | chr5.3:66313206-66313225 | MS.gene070056:intron | 20.0% |
| !! | TAAAAGAACTATTACTAGTA+TGG | - | chr5.3:66314187-66314206 | MS.gene070056:intron | 20.0% |
| !! | TAATCTATGATAACTCAATA+GGG | + | chr5.3:66313441-66313460 | None:intergenic | 20.0% |
| !! | TGGAAAAAAAAATCAATTCT+AGG | + | chr5.3:66310876-66310895 | None:intergenic | 20.0% |
| !! | TTATTAAGGAGAAAAAAACA+TGG | + | chr5.3:66315877-66315896 | None:intergenic | 20.0% |
| !! | TTCTTATTATACCATGAATA+TGG | - | chr5.3:66315726-66315745 | MS.gene070056:intron | 20.0% |
| !! | TTTCTCCTTAATAATTTGAA+CGG | - | chr5.3:66315883-66315902 | MS.gene070056:intron | 20.0% |
| !!! | AACTCATTTTAAAAATGTAG+GGG | + | chr5.3:66311639-66311658 | None:intergenic | 20.0% |
| !!! | ACTAATATTTTTTGTTTTGG+TGG | + | chr5.3:66312916-66312935 | None:intergenic | 20.0% |
| !!! | ATTGAATTTGTTAATGATGT+TGG | - | chr5.3:66313469-66313488 | MS.gene070056:intron | 20.0% |
| !!! | ATTGGAAAATCTTAATTTGA+AGG | - | chr5.3:66312236-66312255 | MS.gene070056:intron | 20.0% |
| !!! | CAACTCATTTTAAAAATGTA+GGG | + | chr5.3:66311640-66311659 | None:intergenic | 20.0% |
| !!! | CACACTAATATTTTTTGTTT+TGG | + | chr5.3:66312919-66312938 | None:intergenic | 20.0% |
| !!! | CTTATCATATACTGAATTTT+CGG | - | chr5.3:66314898-66314917 | MS.gene070056:intron | 20.0% |
| !!! | CTTTTATAATAAGATTACAG+AGG | + | chr5.3:66314173-66314192 | None:intergenic | 20.0% |
| !!! | TAAATAGATATTTTGACAGA+GGG | - | chr5.3:66311532-66311551 | MS.gene070056:intron | 20.0% |
| !!! | TCAACTCATTTTAAAAATGT+AGG | + | chr5.3:66311641-66311660 | None:intergenic | 20.0% |
| !!! | TGTGATTTTAGTTTTACATA+CGG | + | chr5.3:66315268-66315287 | None:intergenic | 20.0% |
| !!! | TTAAATAGATATTTTGACAG+AGG | - | chr5.3:66311531-66311550 | MS.gene070056:intron | 20.0% |
| ! | AAACACTTGTGATACTATTT+GGG | + | chr5.3:66314469-66314488 | None:intergenic | 25.0% |
| ! | AAACTTGATATTGACAATCT+TGG | + | chr5.3:66312791-66312810 | None:intergenic | 25.0% |
| ! | AACTATAATGACAAAGACAA+GGG | + | chr5.3:66312615-66312634 | None:intergenic | 25.0% |
| ! | AAGATTATGAACCATATTCA+TGG | + | chr5.3:66315740-66315759 | None:intergenic | 25.0% |
| ! | AAGGTAAAATGATCTATGTT+TGG | + | chr5.3:66310938-66310957 | None:intergenic | 25.0% |
| ! | ACAAAACATACACAGAAAAA+CGG | - | chr5.3:66311049-66311068 | MS.gene070056:intron | 25.0% |
| ! | ACTAGTAGTTCTTCAAATTA+AGG | + | chr5.3:66311576-66311595 | None:intergenic | 25.0% |
| ! | AGCTGAATGAAAAATTTATC+AGG | + | chr5.3:66313844-66313863 | None:intergenic | 25.0% |
| ! | ATAACCTTCTACAATAATAC+GGG | + | chr5.3:66312116-66312135 | None:intergenic | 25.0% |
| ! | ATCAAGACTATAGTGATATA+GGG | - | chr5.3:66316094-66316113 | MS.gene070056:intron | 25.0% |
| ! | ATTGTATAAGTAATTGATCC+TGG | - | chr5.3:66313543-66313562 | MS.gene070056:intron | 25.0% |
| ! | CATCAATCTTGCTAAAAAAA+TGG | - | chr5.3:66313205-66313224 | MS.gene070056:intron | 25.0% |
| ! | GAAAAGAAAGAATAGATGAT+TGG | - | chr5.3:66314722-66314741 | MS.gene070056:intron | 25.0% |
| ! | GACTAACATTGTTCAATTTA+AGG | + | chr5.3:66311386-66311405 | None:intergenic | 25.0% |
| ! | TAAACACTTGTGATACTATT+TGG | + | chr5.3:66314470-66314489 | None:intergenic | 25.0% |
| ! | TAACACCGTTCAAATTATTA+AGG | + | chr5.3:66315891-66315910 | None:intergenic | 25.0% |
| ! | TAAGATTACGAAGTTAAGAA+GGG | + | chr5.3:66311723-66311742 | None:intergenic | 25.0% |
| ! | TACTTGAAGCTAGAAATTAT+CGG | - | chr5.3:66310843-66310862 | MS.gene070056:intron | 25.0% |
| ! | TATTGTAGAAGGTTATTTGA+GGG | - | chr5.3:66312120-66312139 | MS.gene070056:intron | 25.0% |
| ! | TCAAATAAGTTAATCCAAAC+AGG | - | chr5.3:66314505-66314524 | MS.gene070056:intron | 25.0% |
| ! | TCTTAAAAACATAAGGAAGA+AGG | - | chr5.3:66315550-66315569 | MS.gene070056:intron | 25.0% |
| ! | TGTAACTAGATATTTCTTCT+CGG | - | chr5.3:66315364-66315383 | MS.gene070056:intron | 25.0% |
| ! | TTAAGTAGAATCAATTCTAG+AGG | - | chr5.3:66310734-66310753 | MS.gene070056:intron | 25.0% |
| ! | TTAATAATTTGAACGGTGTT+AGG | - | chr5.3:66315890-66315909 | MS.gene070056:intron | 25.0% |
| ! | TTATTGTAGAAGGTTATTTG+AGG | - | chr5.3:66312119-66312138 | MS.gene070056:intron | 25.0% |
| !! | AAGAACACTTTGTACAATTT+TGG | + | chr5.3:66316257-66316276 | None:intergenic | 25.0% |
| !! | AATTTAGCACCACATTTTAA+AGG | - | chr5.3:66311424-66311443 | MS.gene070056:CDS | 25.0% |
| !! | ACAGATTCAGAACAATATTT+TGG | + | chr5.3:66315606-66315625 | None:intergenic | 25.0% |
| !! | AGCAAGATTAATAATGGAAA+GGG | - | chr5.3:66311885-66311904 | MS.gene070056:intron | 25.0% |
| !! | AGTTTCAATCTTTTCTCAAT+TGG | - | chr5.3:66310384-66310403 | MS.gene070056:CDS | 25.0% |
| !! | ATCAAGTTTTTCATCAAGAT+CGG | - | chr5.3:66312802-66312821 | MS.gene070056:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCTAAC+AGG | + | chr5.3:66314257-66314276 | None:intergenic | 25.0% |
| !! | CTTTCAATGTAAATTTTACC+CGG | + | chr5.3:66313777-66313796 | None:intergenic | 25.0% |
| !! | GTTTCAATCTTTTCTCAATT+GGG | - | chr5.3:66310385-66310404 | MS.gene070056:CDS | 25.0% |
| !! | TCAAAATCAAATTTTCCTCA+CGG | + | chr5.3:66310596-66310615 | None:intergenic | 25.0% |
| !! | TCAGATAGCTATTATGTTTT+GGG | - | chr5.3:66312432-66312451 | MS.gene070056:intron | 25.0% |
| !! | TGCACATATAGAATCAATTT+TGG | - | chr5.3:66311009-66311028 | MS.gene070056:intron | 25.0% |
| !! | TTAAGTTGTTTATCCTAACA+GGG | + | chr5.3:66314256-66314275 | None:intergenic | 25.0% |
| !! | TTCAGATAGCTATTATGTTT+TGG | - | chr5.3:66312431-66312450 | MS.gene070056:intron | 25.0% |
| !! | TTCTGCAATTTTATGATACA+GGG | - | chr5.3:66313626-66313645 | MS.gene070056:intron | 25.0% |
| !! | TTTCTGCAATTTTATGATAC+AGG | - | chr5.3:66313625-66313644 | MS.gene070056:intron | 25.0% |
| !! | TTTTGTTAAGTTATGCTAGT+TGG | - | chr5.3:66314225-66314244 | MS.gene070056:intron | 25.0% |
| !!! | AACGTATTGATTATTGACTA+TGG | + | chr5.3:66315494-66315513 | None:intergenic | 25.0% |
| !!! | ACTTTGAAACGAAAATCATA+CGG | + | chr5.3:66310367-66310386 | None:intergenic | 25.0% |
| !!! | AGCATAAAACCTTTAAAATG+TGG | + | chr5.3:66311436-66311455 | None:intergenic | 25.0% |
| !!! | AGTTAACTTTTTTCATGCTA+AGG | - | chr5.3:66315096-66315115 | MS.gene070056:intron | 25.0% |
| !!! | GAAACTTGATAATGGTTTTT+TGG | - | chr5.3:66311071-66311090 | MS.gene070056:intron | 25.0% |
| !!! | GTTAACTTTTTTCATGCTAA+GGG | - | chr5.3:66315097-66315116 | MS.gene070056:intron | 25.0% |
| !!! | TATTATGTTTTGGGTACAAT+TGG | - | chr5.3:66312441-66312460 | MS.gene070056:intron | 25.0% |
| !!! | TGTATTTTTTGTTCCACTTT+TGG | - | chr5.3:66310764-66310783 | MS.gene070056:intron | 25.0% |
| !!! | TTGATTTTGAGTCAATTGTT+TGG | - | chr5.3:66310606-66310625 | MS.gene070056:intron | 25.0% |
| !!! | TTGCTATTTCGTAAATTTGA+GGG | - | chr5.3:66311599-66311618 | MS.gene070056:CDS | 25.0% |
| !!! | TTTGCTATTTCGTAAATTTG+AGG | - | chr5.3:66311598-66311617 | MS.gene070056:CDS | 25.0% |
| AAAAACACTGAGCTAAAATG+AGG | + | chr5.3:66311264-66311283 | None:intergenic | 30.0% | |
| AAAATCATACGGTTTGAAGA+GGG | + | chr5.3:66310356-66310375 | None:intergenic | 30.0% | |
| AAAGAGGAGTAAAACCAAAA+AGG | - | chr5.3:66312397-66312416 | MS.gene070056:intron | 30.0% | |
| AACAAACACAACGCAAAAAA+TGG | + | chr5.3:66315463-66315482 | None:intergenic | 30.0% | |
| AAGATTACGAAGTTAAGAAG+GGG | + | chr5.3:66311722-66311741 | None:intergenic | 30.0% | |
| AATAATACGGGTAGTAAACT+TGG | + | chr5.3:66312104-66312123 | None:intergenic | 30.0% | |
| AATTACTTGAATTACTCGCA+TGG | - | chr5.3:66313805-66313824 | MS.gene070056:intron | 30.0% | |
| ACAAAGATCATGTGATTGTT+TGG | - | chr5.3:66310559-66310578 | MS.gene070056:intron | 30.0% | |
| ACAGTATGTTCTTCAAATTC+AGG | - | chr5.3:66316163-66316182 | MS.gene070056:CDS | 30.0% | |
| ACATAGCAACATAAGCATAT+TGG | + | chr5.3:66315823-66315842 | None:intergenic | 30.0% | |
| AGAAAGTGATGTTTGTTCAA+TGG | + | chr5.3:66314087-66314106 | None:intergenic | 30.0% | |
| AGGTCGTTTATTGATATAGA+TGG | - | chr5.3:66311501-66311520 | MS.gene070056:intron | 30.0% | |
| ATGCCTTTAATCTTAAGTGT+TGG | - | chr5.3:66316008-66316027 | MS.gene070056:intron | 30.0% | |
| ATGTAGTCCTTGAAATTGTA+AGG | - | chr5.3:66311315-66311334 | MS.gene070056:intron | 30.0% | |
| ATTGTAGAAGGTTATTTGAG+GGG | - | chr5.3:66312121-66312140 | MS.gene070056:intron | 30.0% | |
| CAACTATAATGACAAAGACA+AGG | + | chr5.3:66312616-66312635 | None:intergenic | 30.0% | |
| CATAGCAACATAAGCATATT+GGG | + | chr5.3:66315822-66315841 | None:intergenic | 30.0% | |
| GAAAAACGGAAACTTGATAA+TGG | - | chr5.3:66311063-66311082 | MS.gene070056:intron | 30.0% | |
| GACAAGAGACACAATTATAA+AGG | - | chr5.3:66315684-66315703 | MS.gene070056:intron | 30.0% | |
| GAGTGTAGTCAAAGAATATA+AGG | + | chr5.3:66316139-66316158 | None:intergenic | 30.0% | |
| GATCAAGACTATAGTGATAT+AGG | - | chr5.3:66316093-66316112 | MS.gene070056:intron | 30.0% | |
| GCTAAGAGCAAGATTAATAA+TGG | - | chr5.3:66311879-66311898 | MS.gene070056:intron | 30.0% | |
| GCTCAAATTGTTAAAATGAC+TGG | - | chr5.3:66312649-66312668 | MS.gene070056:intron | 30.0% | |
| GGGCTACTAAAATGAAAATT+TGG | + | chr5.3:66312595-66312614 | None:intergenic | 30.0% | |
| GTAACAGAGAAAAAGACATT+TGG | + | chr5.3:66312724-66312743 | None:intergenic | 30.0% | |
| GTAAGATTACGAAGTTAAGA+AGG | + | chr5.3:66311724-66311743 | None:intergenic | 30.0% | |
| GTGATTGTTTGGTTAATGTT+TGG | - | chr5.3:66310570-66310589 | MS.gene070056:intron | 30.0% | |
| TAAATCAAGACTAAAAGCTC+AGG | + | chr5.3:66314559-66314578 | None:intergenic | 30.0% | |
| TACTAGTATGGTATATTCAG+TGG | - | chr5.3:66314199-66314218 | MS.gene070056:intron | 30.0% | |
| TATCAATCAGTTTAGGTGAT+TGG | - | chr5.3:66314825-66314844 | MS.gene070056:intron | 30.0% | |
| TATTGACAATCTTGGTTAAG+AGG | + | chr5.3:66312783-66312802 | None:intergenic | 30.0% | |
| TCAAGTAGAATCAATTCTAG+TGG | + | chr5.3:66310830-66310849 | None:intergenic | 30.0% | |
| TCAATAAATTCATTGGGGAT+TGG | - | chr5.3:66312218-66312237 | MS.gene070056:intron | 30.0% | |
| TTATTATGGTGAGAAAAGCA+GGG | - | chr5.3:66312340-66312359 | MS.gene070056:intron | 30.0% | |
| TTTATTATGGTGAGAAAAGC+AGG | - | chr5.3:66312339-66312358 | MS.gene070056:intron | 30.0% | |
| ! | AACTTTTCAACAAATGTGTC+AGG | - | chr5.3:66310521-66310540 | MS.gene070056:intron | 30.0% |
| ! | ACAAGACTTTTTACTTTCAC+TGG | - | chr5.3:66312302-66312321 | MS.gene070056:intron | 30.0% |
| ! | ATGTAATTTGAAGTTCTCTG+CGG | - | chr5.3:66311957-66311976 | MS.gene070056:intron | 30.0% |
| ! | GAGCAAGATTAATAATGGAA+AGG | - | chr5.3:66311884-66311903 | MS.gene070056:intron | 30.0% |
| ! | GATTAGTTGTTTAGTGATTG+TGG | - | chr5.3:66311140-66311159 | MS.gene070056:intron | 30.0% |
| ! | GTTTTTGTGTTGTGATCTAT+AGG | - | chr5.3:66310443-66310462 | MS.gene070056:CDS | 30.0% |
| ! | TACACCTCAAGAATCAATTT+TGG | + | chr5.3:66310795-66310814 | None:intergenic | 30.0% |
| ! | TATAGATTTTCGGCATAAGT+AGG | + | chr5.3:66313361-66313380 | None:intergenic | 30.0% |
| ! | TCAAGTTTTTCATCAAGATC+GGG | - | chr5.3:66312803-66312822 | MS.gene070056:intron | 30.0% |
| ! | TGCTTTTCTCACCATAATAA+AGG | + | chr5.3:66312340-66312359 | None:intergenic | 30.0% |
| ! | TTTGATGGACATCATATTTG+AGG | + | chr5.3:66312689-66312708 | None:intergenic | 30.0% |
| ! | TTTTTGGACTGAATGAAAGT+TGG | - | chr5.3:66311087-66311106 | MS.gene070056:intron | 30.0% |
| !! | AACCTTTGACTTTAAAGTGT+TGG | + | chr5.3:66316353-66316372 | None:intergenic | 30.0% |
| !! | AATGGATTTTACAAAGGCAT+GGG | - | chr5.3:66316229-66316248 | MS.gene070056:intron | 30.0% |
| !! | ACCTTTGACTTTAAAGTGTT+GGG | + | chr5.3:66316352-66316371 | None:intergenic | 30.0% |
| !! | GAACAACTTTTTCTCCTTTT+TGG | + | chr5.3:66312414-66312433 | None:intergenic | 30.0% |
| !! | GTTGTTTTGTTACAAATCTC+AGG | - | chr5.3:66315134-66315153 | MS.gene070056:intron | 30.0% |
| !! | TTGGTTCTAGCATCATTATT+CGG | - | chr5.3:66312372-66312391 | MS.gene070056:intron | 30.0% |
| !!! | AGTTTTGTTGTTGAAGAAGT+GGG | - | chr5.3:66311784-66311803 | MS.gene070056:intron | 30.0% |
| !!! | ATTTTTTGTTCCACTTTTGG+AGG | - | chr5.3:66310767-66310786 | MS.gene070056:intron | 30.0% |
| !!! | GGGTTTAATGGATTTTACAA+AGG | - | chr5.3:66316223-66316242 | MS.gene070056:intron | 30.0% |
| !!! | TAATGGATTTTACAAAGGCA+TGG | - | chr5.3:66316228-66316247 | MS.gene070056:intron | 30.0% |
| !!! | TAGTTTTGTTGTTGAAGAAG+TGG | - | chr5.3:66311783-66311802 | MS.gene070056:intron | 30.0% |
| !!! | TCAAAGGCACTATAGATTTT+CGG | + | chr5.3:66313371-66313390 | None:intergenic | 30.0% |
| !!! | TCATTTTAGCTCAGTGTTTT+TGG | - | chr5.3:66311263-66311282 | MS.gene070056:CDS | 30.0% |
| AAACAGAGCAATCAAAAACC+GGG | - | chr5.3:66313110-66313129 | MS.gene070056:intron | 35.0% | |
| AAGAAGGGCAATAAGAATCT+TGG | - | chr5.3:66310498-66310517 | MS.gene070056:intron | 35.0% | |
| AAGACTTGACTAAAGGTAGT+AGG | + | chr5.3:66312487-66312506 | None:intergenic | 35.0% | |
| AAGTGTTAGGGCCTTTATTA+TGG | - | chr5.3:66312326-66312345 | MS.gene070056:intron | 35.0% | |
| AATAGGTGTTTGCGTAGTTA+TGG | - | chr5.3:66314628-66314647 | MS.gene070056:intron | 35.0% | |
| AATCAGTTTAGGTGATTGGA+AGG | - | chr5.3:66314829-66314848 | MS.gene070056:intron | 35.0% | |
| AATTATCTCCATAAGCACTC+CGG | + | chr5.3:66314402-66314421 | None:intergenic | 35.0% | |
| ACCACATTAAGTTCAGATCA+AGG | + | chr5.3:66313315-66313334 | None:intergenic | 35.0% | |
| ACCTTGATCTGAACTTAATG+TGG | - | chr5.3:66313311-66313330 | MS.gene070056:intron | 35.0% | |
| ACTACCCGTATTATTGTAGA+AGG | - | chr5.3:66312109-66312128 | MS.gene070056:intron | 35.0% | |
| AGATTCTTATTGCCCTTCTT+CGG | + | chr5.3:66310498-66310517 | None:intergenic | 35.0% | |
| ATAGGTGTTTGCGTAGTTAT+GGG | - | chr5.3:66314629-66314648 | MS.gene070056:intron | 35.0% | |
| ATCCATTAAACCCTTCATAG+CGG | + | chr5.3:66316216-66316235 | None:intergenic | 35.0% | |
| ATCTGAACTTAATGTGGTGT+AGG | - | chr5.3:66313317-66313336 | MS.gene070056:intron | 35.0% | |
| ATTAAGATGATCCGCTATGA+AGG | - | chr5.3:66316202-66316221 | MS.gene070056:intron | 35.0% | |
| ATTGTAGGTTGTGAAACAAG+AGG | - | chr5.3:66311175-66311194 | MS.gene070056:intron | 35.0% | |
| CAAAAATCTCATTGGCAACT+AGG | + | chr5.3:66314532-66314551 | None:intergenic | 35.0% | |
| CAAACAGAGCAATCAAAAAC+CGG | - | chr5.3:66313109-66313128 | MS.gene070056:intron | 35.0% | |
| CAAGCTAGACAAGTTAACAA+TGG | - | chr5.3:66315660-66315679 | MS.gene070056:intron | 35.0% | |
| CAGCATAAGGAAATACTATG+TGG | - | chr5.3:66315843-66315862 | MS.gene070056:intron | 35.0% | |
| CATTAACTTTGCAGAGTCAA+AGG | + | chr5.3:66313387-66313406 | None:intergenic | 35.0% | |
| GAAAATCATACGGTTTGAAG+AGG | + | chr5.3:66310357-66310376 | None:intergenic | 35.0% | |
| GAAACTTCATGACATCGAAT+GGG | + | chr5.3:66312043-66312062 | None:intergenic | 35.0% | |
| GATCGTACCAAAATTGTTTC+TGG | + | chr5.3:66313182-66313201 | None:intergenic | 35.0% | |
| GATTCAAGAAGTTTATGACG+AGG | - | chr5.3:66315016-66315035 | MS.gene070056:intron | 35.0% | |
| GCACCAACACTTAAGATTAA+AGG | + | chr5.3:66316014-66316033 | None:intergenic | 35.0% | |
| GCATCATTATTCGGTAAAAG+AGG | - | chr5.3:66312381-66312400 | MS.gene070056:intron | 35.0% | |
| GTCACTATAGGAAGAGAATA+AGG | - | chr5.3:66312186-66312205 | MS.gene070056:intron | 35.0% | |
| GTCCTTGAAATTGTAAGGAT+CGG | - | chr5.3:66311320-66311339 | MS.gene070056:intron | 35.0% | |
| GTTGTTTGCATAAGCTATTC+CGG | - | chr5.3:66314380-66314399 | MS.gene070056:intron | 35.0% | |
| TAAAGCAGCAACAATAAGTG+AGG | + | chr5.3:66313753-66313772 | None:intergenic | 35.0% | |
| TAAGGAAATACTATGTGGCA+TGG | - | chr5.3:66315848-66315867 | MS.gene070056:intron | 35.0% | |
| TACAGCATGAACTGTATAGA+AGG | + | chr5.3:66315168-66315187 | None:intergenic | 35.0% | |
| TAGTTCATTGCTCATGATGT+TGG | + | chr5.3:66311983-66312002 | None:intergenic | 35.0% | |
| TATACCTTCACAACAAGAAG+AGG | + | chr5.3:66315427-66315446 | None:intergenic | 35.0% | |
| TATGTTGCTATGTCAGCATA+AGG | - | chr5.3:66315830-66315849 | MS.gene070056:intron | 35.0% | |
| TCAAACCCTCCAATATGAAT+CGG | + | chr5.3:66313241-66313260 | None:intergenic | 35.0% | |
| TCTTACCTATGTGATTACGT+TGG | - | chr5.3:66312860-66312879 | MS.gene070056:intron | 35.0% | |
| TGAAACTTCATGACATCGAA+TGG | + | chr5.3:66312044-66312063 | None:intergenic | 35.0% | |
| TGGTTATGTCAATGCATTGT+AGG | - | chr5.3:66311160-66311179 | MS.gene070056:intron | 35.0% | |
| TGTATTACCAACATTGGTCA+TGG | - | chr5.3:66315064-66315083 | MS.gene070056:intron | 35.0% | |
| TGTTGTCTTGAATAGTTGAC+AGG | + | chr5.3:66314943-66314962 | None:intergenic | 35.0% | |
| TTAAGATGATCCGCTATGAA+GGG | - | chr5.3:66316203-66316222 | MS.gene070056:intron | 35.0% | |
| TTCTTCAAATTCAGGTACAC+AGG | - | chr5.3:66316171-66316190 | MS.gene070056:CDS | 35.0% | |
| TTGTAGGTTGTGAAACAAGA+GGG | - | chr5.3:66311176-66311195 | MS.gene070056:intron | 35.0% | |
| ! | AGGACTGTTTTCTGATTGAT+TGG | + | chr5.3:66312763-66312782 | None:intergenic | 35.0% |
| ! | ATCCTGGTTGTTGAATTTTC+TGG | - | chr5.3:66313559-66313578 | MS.gene070056:intron | 35.0% |
| ! | ATGTCATGAGTTGTTTCCAT+AGG | - | chr5.3:66314439-66314458 | MS.gene070056:intron | 35.0% |
| ! | CCTTCAACTCAATTTTAGAC+AGG | - | chr5.3:66310954-66310973 | MS.gene070056:intron | 35.0% |
| ! | CTAGTTGCCAATGAGATTTT+TGG | - | chr5.3:66314530-66314549 | MS.gene070056:intron | 35.0% |
| ! | GCTTTGAGTAGTTTCTTTCA+TGG | + | chr5.3:66312995-66313014 | None:intergenic | 35.0% |
| ! | GGACTGTTTTCTGATTGATT+GGG | + | chr5.3:66312762-66312781 | None:intergenic | 35.0% |
| ! | GTATGTTTTGTCTCCACTTT+TGG | + | chr5.3:66311040-66311059 | None:intergenic | 35.0% |
| ! | TCACAAGCCAGAAACAATTT+TGG | - | chr5.3:66313172-66313191 | MS.gene070056:intron | 35.0% |
| ! | TTTTGACATCCCAACTATGT+TGG | + | chr5.3:66314658-66314677 | None:intergenic | 35.0% |
| !! | CCTGTCTAAAATTGAGTTGA+AGG | + | chr5.3:66310957-66310976 | None:intergenic | 35.0% |
| !! | CTTATTGTTGCTGCTTTATC+CGG | - | chr5.3:66313755-66313774 | MS.gene070056:intron | 35.0% |
| !! | TAATTTGAAGGAAGTGTTGC+TGG | - | chr5.3:66312248-66312267 | MS.gene070056:intron | 35.0% |
| !! | TCCCAACACTTTAAAGTCAA+AGG | - | chr5.3:66316348-66316367 | MS.gene070056:CDS | 35.0% |
| !! | TTAGTTAGGTATGATGGACA+GGG | - | chr5.3:66312144-66312163 | MS.gene070056:intron | 35.0% |
| !! | TTATTGTTGCTGCTTTATCC+GGG | - | chr5.3:66313756-66313775 | MS.gene070056:intron | 35.0% |
| !!! | TTTTTTCAACTTCGCCAACA+AGG | + | chr5.3:66315196-66315215 | None:intergenic | 35.0% |
| AATACGGGTAGTAAACTTGG+AGG | + | chr5.3:66312101-66312120 | None:intergenic | 40.0% | |
| ACAGGGAAATCTTTGTGAAG+TGG | - | chr5.3:66312161-66312180 | MS.gene070056:intron | 40.0% | |
| ACTTTCACTGGCAAGTGTTA+GGG | - | chr5.3:66312314-66312333 | MS.gene070056:intron | 40.0% | |
| AGCAACATAAGCATATTGGG+AGG | + | chr5.3:66315819-66315838 | None:intergenic | 40.0% | |
| AGTTGACAGGAACAAGAGAA+GGG | + | chr5.3:66314930-66314949 | None:intergenic | 40.0% | |
| ATACGGGTAGTAAACTTGGA+GGG | + | chr5.3:66312100-66312119 | None:intergenic | 40.0% | |
| ATACTATTTGGGAGAGCCTA+TGG | + | chr5.3:66314458-66314477 | None:intergenic | 40.0% | |
| ATCCGCTATGAAGGGTTTAA+TGG | - | chr5.3:66316211-66316230 | MS.gene070056:intron | 40.0% | |
| ATCTTGCACCCGATTCATAT+TGG | - | chr5.3:66313229-66313248 | MS.gene070056:intron | 40.0% | |
| CAAACCCTCCAATATGAATC+GGG | + | chr5.3:66313240-66313259 | None:intergenic | 40.0% | |
| CAGGTCACCAAAAATCTCAT+TGG | + | chr5.3:66314540-66314559 | None:intergenic | 40.0% | |
| CATGCTGTATGAAACCTTGT+TGG | - | chr5.3:66315179-66315198 | MS.gene070056:intron | 40.0% | |
| CGAGTAACAACTAGCCATAT+CGG | + | chr5.3:66313890-66313909 | None:intergenic | 40.0% | |
| CTATGTGATTACGTTGGATC+AGG | - | chr5.3:66312866-66312885 | MS.gene070056:intron | 40.0% | |
| CTGATCCAACGTAATCACAT+AGG | + | chr5.3:66312868-66312887 | None:intergenic | 40.0% | |
| CTTCACAACAAGAAGAGGAT+AGG | + | chr5.3:66315422-66315441 | None:intergenic | 40.0% | |
| GACAGAGGGACTAAATTGAT+CGG | - | chr5.3:66311546-66311565 | MS.gene070056:intron | 40.0% | |
| GACCGATCCTTACAATTTCA+AGG | + | chr5.3:66311325-66311344 | None:intergenic | 40.0% | |
| GATAGACTTTACCTACCACA+TGG | + | chr5.3:66314139-66314158 | None:intergenic | 40.0% | |
| GCAACATAAGCATATTGGGA+GGG | + | chr5.3:66315818-66315837 | None:intergenic | 40.0% | |
| GCACTAGAGAATATGAGACT+AGG | - | chr5.3:66313698-66313717 | MS.gene070056:intron | 40.0% | |
| GGAGCTGACAAAATTAAACG+AGG | - | chr5.3:66315571-66315590 | MS.gene070056:intron | 40.0% | |
| TAAAGTCTAAACTTGCCACC+TGG | + | chr5.3:66312542-66312561 | None:intergenic | 40.0% | |
| TACTTTCACTGGCAAGTGTT+AGG | - | chr5.3:66312313-66312332 | MS.gene070056:intron | 40.0% | |
| TAGGTGTTTGCGTAGTTATG+GGG | - | chr5.3:66314630-66314649 | MS.gene070056:intron | 40.0% | |
| TAGTAGCGTAACTGCTTTAG+AGG | - | chr5.3:66315224-66315243 | MS.gene070056:intron | 40.0% | |
| TAGTTGACAGGAACAAGAGA+AGG | + | chr5.3:66314931-66314950 | None:intergenic | 40.0% | |
| TATAAGTGTCAGTGTCGTGT+CGG | - | chr5.3:66315967-66315986 | MS.gene070056:intron | 40.0% | |
| TCTCATATTCTCTAGTGCAG+CGG | + | chr5.3:66313696-66313715 | None:intergenic | 40.0% | |
| TGCCAGAAAATTCAACAACC+AGG | + | chr5.3:66313564-66313583 | None:intergenic | 40.0% | |
| TGCTGTTGACAAATCCGATA+TGG | - | chr5.3:66313873-66313892 | MS.gene070056:intron | 40.0% | |
| TGTGAAGTGGTTGTCACTAT+AGG | - | chr5.3:66312174-66312193 | MS.gene070056:intron | 40.0% | |
| TGTGACTAAGGGGTTGTTAT+GGG | + | chr5.3:66312512-66312531 | None:intergenic | 40.0% | |
| TTCAGTCCTCGAAATTGTCA+GGG | + | chr5.3:66311664-66311683 | None:intergenic | 40.0% | |
| TTTCAGTCCTCGAAATTGTC+AGG | + | chr5.3:66311665-66311684 | None:intergenic | 40.0% | |
| ! | AGTTTTTCATCAAGATCGGG+AGG | - | chr5.3:66312806-66312825 | MS.gene070056:intron | 40.0% |
| ! | ATGGCTAGTTCCATAAGCAA+GGG | + | chr5.3:66314120-66314139 | None:intergenic | 40.0% |
| ! | CTATCCTCTTCTTGTTGTGA+AGG | - | chr5.3:66315420-66315439 | MS.gene070056:CDS | 40.0% |
| ! | CTGGAAGTATGTGTGACTAA+GGG | + | chr5.3:66312523-66312542 | None:intergenic | 40.0% |
| ! | GAAGGGTGTATTACCAACAT+TGG | - | chr5.3:66315058-66315077 | MS.gene070056:intron | 40.0% |
| ! | GGAGCCAAAATTGATTCTTG+AGG | - | chr5.3:66310788-66310807 | MS.gene070056:intron | 40.0% |
| ! | GGTAATACGAAGCACTAACA+CGG | - | chr5.3:66315911-66315930 | MS.gene070056:intron | 40.0% |
| ! | GTTTTTCATCAAGATCGGGA+GGG | - | chr5.3:66312807-66312826 | MS.gene070056:intron | 40.0% |
| ! | TGGAAGTATGTGTGACTAAG+GGG | + | chr5.3:66312522-66312541 | None:intergenic | 40.0% |
| ! | TGGTTCTTAAGCTGCTTTGA+TGG | + | chr5.3:66312704-66312723 | None:intergenic | 40.0% |
| ! | TTTTTCATCAAGATCGGGAG+GGG | - | chr5.3:66312808-66312827 | MS.gene070056:intron | 40.0% |
| !! | GGTTATTTGAGGGGTTAGTT+AGG | - | chr5.3:66312130-66312149 | MS.gene070056:intron | 40.0% |
| !! | GTTAGTTAGGTATGATGGAC+AGG | - | chr5.3:66312143-66312162 | MS.gene070056:intron | 40.0% |
| !! | TAAGTGTTGGTGCGACATAT+AGG | - | chr5.3:66316021-66316040 | MS.gene070056:intron | 40.0% |
| !! | TGTTTTGTCTCCACTTTTGG+AGG | + | chr5.3:66311037-66311056 | None:intergenic | 40.0% |
| !!! | AATTTTGGCTCCTCCAAAAG+TGG | - | chr5.3:66311024-66311043 | MS.gene070056:intron | 40.0% |
| !!! | AATTTTGGCTCCTCCAAAAG+TGG | + | chr5.3:66311043-66311024 | None:intergenic | 40.0% |
| !!! | TGCTGCAGCTGTTTTGTTTA+TGG | - | chr5.3:66316276-66316295 | MS.gene070056:intron | 40.0% |
| AAAAGCAGGGAAGCTTCTCT+TGG | - | chr5.3:66312353-66312372 | MS.gene070056:intron | 45.0% | |
| AACTGATCGTGATCCGAAGA+AGG | - | chr5.3:66310482-66310501 | MS.gene070056:intron | 45.0% | |
| ACTGATCGTGATCCGAAGAA+GGG | - | chr5.3:66310483-66310502 | MS.gene070056:intron | 45.0% | |
| AGACGCATAGAAAAGAGTCG+AGG | - | chr5.3:66314030-66314049 | MS.gene070056:intron | 45.0% | |
| AGGTGTTTGCGTAGTTATGG+GGG | - | chr5.3:66314631-66314650 | MS.gene070056:intron | 45.0% | |
| AGGTTGTGAAACAAGAGGGA+TGG | - | chr5.3:66311180-66311199 | MS.gene070056:intron | 45.0% | |
| AGTTGACCCTGACAATTTCG+AGG | - | chr5.3:66311655-66311674 | MS.gene070056:intron | 45.0% | |
| ATGGGGGAAGACTTGACTAA+AGG | + | chr5.3:66312494-66312513 | None:intergenic | 45.0% | |
| ATGTCGGACGCTTTGATCAA+TGG | - | chr5.3:66310285-66310304 | MS.gene070056:CDS | 45.0% | |
| ATTGGCAACTAGGACCTGTT+TGG | + | chr5.3:66314522-66314541 | None:intergenic | 45.0% | |
| CAACGTACCATGACCAATGT+TGG | + | chr5.3:66315074-66315093 | None:intergenic | 45.0% | |
| CAAGAAGTTTATGACGAGGC+TGG | - | chr5.3:66315020-66315039 | MS.gene070056:intron | 45.0% | |
| CCTTAGTCACACATACTTCC+AGG | - | chr5.3:66312521-66312540 | MS.gene070056:CDS | 45.0% | |
| GAGAATATGAGACTAGGCAG+TGG | - | chr5.3:66313704-66313723 | MS.gene070056:intron | 45.0% | |
| GATGTCAAAACTGCCATGTG+AGG | - | chr5.3:66314668-66314687 | MS.gene070056:intron | 45.0% | |
| GCTAGTTGTTACTCGTATGC+AGG | - | chr5.3:66313895-66313914 | MS.gene070056:intron | 45.0% | |
| GGACGCTTTGATCAATGGAT+TGG | - | chr5.3:66310290-66310309 | MS.gene070056:CDS | 45.0% | |
| GGGAACATTCTTTGCAAGCA+AGG | + | chr5.3:66316332-66316351 | None:intergenic | 45.0% | |
| GGTTGTGAAACAAGAGGGAT+GGG | - | chr5.3:66311181-66311200 | MS.gene070056:intron | 45.0% | |
| GTGACTAAGGGGTTGTTATG+GGG | + | chr5.3:66312511-66312530 | None:intergenic | 45.0% | |
| GTGATTACGTTGGATCAGGA+AGG | - | chr5.3:66312870-66312889 | MS.gene070056:intron | 45.0% | |
| GTGTGACTAAGGGGTTGTTA+TGG | + | chr5.3:66312513-66312532 | None:intergenic | 45.0% | |
| TAGTCACACATACTTCCAGG+TGG | - | chr5.3:66312524-66312543 | MS.gene070056:CDS | 45.0% | |
| TATACGGCAAAAGCCTCACA+TGG | + | chr5.3:66314684-66314703 | None:intergenic | 45.0% | |
| TATGGAACTAGCCATGTGGT+AGG | - | chr5.3:66314125-66314144 | MS.gene070056:intron | 45.0% | |
| TCAATGGCATCTGACAACCT+CGG | + | chr5.3:66314071-66314090 | None:intergenic | 45.0% | |
| TCATATTGGAGGGTTTGAGC+AGG | - | chr5.3:66313243-66313262 | MS.gene070056:intron | 45.0% | |
| TGACTAAGGGGTTGTTATGG+GGG | + | chr5.3:66312510-66312529 | None:intergenic | 45.0% | |
| TGCACCCGATTCATATTGGA+GGG | - | chr5.3:66313233-66313252 | MS.gene070056:intron | 45.0% | |
| TGCTTATGGAACTAGCCATG+TGG | - | chr5.3:66314121-66314140 | MS.gene070056:intron | 45.0% | |
| TGTGAAATCGCAGGGTTACT+CGG | + | chr5.3:66313157-66313176 | None:intergenic | 45.0% | |
| TTGCACCCGATTCATATTGG+AGG | - | chr5.3:66313232-66313251 | MS.gene070056:intron | 45.0% | |
| TTGGTTAATGTTTGGCCGTG+AGG | - | chr5.3:66310578-66310597 | MS.gene070056:intron | 45.0% | |
| ! | AAGCTATTCCGGAGTGCTTA+TGG | - | chr5.3:66314391-66314410 | MS.gene070056:intron | 45.0% |
| ! | CATGGCTAGTTCCATAAGCA+AGG | + | chr5.3:66314121-66314140 | None:intergenic | 45.0% |
| ! | CCTGGAAGTATGTGTGACTA+AGG | + | chr5.3:66312524-66312543 | None:intergenic | 45.0% |
| ! | TATGACGAGGCTGGAGTTTT+GGG | - | chr5.3:66315029-66315048 | MS.gene070056:intron | 45.0% |
| ! | TGGCTAGTTCCATAAGCAAG+GGG | + | chr5.3:66314119-66314138 | None:intergenic | 45.0% |
| ! | TTATGACGAGGCTGGAGTTT+TGG | - | chr5.3:66315028-66315047 | MS.gene070056:intron | 45.0% |
| ! | TTTTCATCAAGATCGGGAGG+GGG | - | chr5.3:66312809-66312828 | MS.gene070056:intron | 45.0% |
| ! | TTTTGTTGCTATCGCAGGCA+AGG | - | chr5.3:66315634-66315653 | MS.gene070056:intron | 45.0% |
| !! | GAGGGGTTAGTTAGGTATGA+TGG | - | chr5.3:66312138-66312157 | MS.gene070056:intron | 45.0% |
| !! | GCTTTGATCAATGGATTGGC+TGG | - | chr5.3:66310294-66310313 | MS.gene070056:CDS | 45.0% |
| !! | TTCTGGCTTGTGAAATCGCA+GGG | + | chr5.3:66313165-66313184 | None:intergenic | 45.0% |
| !! | TTTCTGGCTTGTGAAATCGC+AGG | + | chr5.3:66313166-66313185 | None:intergenic | 45.0% |
| !!! | GGAGTTTTGGGTTTCTGGAA+GGG | - | chr5.3:66315041-66315060 | MS.gene070056:intron | 45.0% |
| !!! | GTTGCTTTTGTTGCTATCGC+AGG | - | chr5.3:66315629-66315648 | MS.gene070056:intron | 45.0% |
| !!! | TGGAGTTTTGGGTTTCTGGA+AGG | - | chr5.3:66315040-66315059 | MS.gene070056:intron | 45.0% |
| AAGGCATGTCCGAGTGTCTT+GGG | + | chr5.3:66315995-66316014 | None:intergenic | 50.0% | |
| ACTGTTGAGCCCCTTGCTTA+TGG | - | chr5.3:66314107-66314126 | MS.gene070056:intron | 50.0% | |
| ATGAGACTAGGCAGTGGTGA+TGG | - | chr5.3:66313710-66313729 | MS.gene070056:intron | 50.0% | |
| CATCTGACAACCTCGGATCA+GGG | + | chr5.3:66314064-66314083 | None:intergenic | 50.0% | |
| CTAGTTGGCTAGACCCTGTT+AGG | - | chr5.3:66314240-66314259 | MS.gene070056:intron | 50.0% | |
| GGGGTTGCAAGATTGCAACT+AGG | - | chr5.3:66312828-66312847 | MS.gene070056:intron | 50.0% | |
| GGGTAGTAAACTTGGAGGGT+TGG | + | chr5.3:66312096-66312115 | None:intergenic | 50.0% | |
| GGTGTTTGCGTAGTTATGGG+GGG | - | chr5.3:66314632-66314651 | MS.gene070056:intron | 50.0% | |
| TATGGGGGGCCAACATAGTT+GGG | - | chr5.3:66314646-66314665 | MS.gene070056:intron | 50.0% | |
| TGAAACAAGAGGGATGGGAG+AGG | - | chr5.3:66311186-66311205 | MS.gene070056:intron | 50.0% | |
| TGTCGGTACAGCTACATCTC+AGG | - | chr5.3:66311235-66311254 | MS.gene070056:CDS | 50.0% | |
| TTATGGGGGGCCAACATAGT+TGG | - | chr5.3:66314645-66314664 | MS.gene070056:intron | 50.0% | |
| ! | AAAGGCATGTCCGAGTGTCT+TGG | + | chr5.3:66315996-66316015 | None:intergenic | 50.0% |
| ! | GTAGCTGTACCGACAAGTGA+TGG | + | chr5.3:66311230-66311249 | None:intergenic | 50.0% |
| !! | ATCAATGGATTGGCTGGAGC+TGG | - | chr5.3:66310300-66310319 | MS.gene070056:CDS | 50.0% |
| !!! | AGGCTGGAGTTTTGGGTTTC+TGG | - | chr5.3:66315036-66315055 | MS.gene070056:intron | 50.0% |
| AGGGTTACTCGGAGCTACTC+GGG | + | chr5.3:66313146-66313165 | None:intergenic | 55.0% | |
| CAGGGTTACTCGGAGCTACT+CGG | + | chr5.3:66313147-66313166 | None:intergenic | 55.0% | |
| CGGACACTGGACACAACAGA+AGG | - | chr5.3:66315931-66315950 | MS.gene070056:intron | 55.0% | |
| GAGGGATGGGAGAGGTTGTA+TGG | - | chr5.3:66311194-66311213 | MS.gene070056:intron | 55.0% | |
| GCATCTGACAACCTCGGATC+AGG | + | chr5.3:66314065-66314084 | None:intergenic | 55.0% | |
| GGAAAACTCTCCCTGATCCG+AGG | - | chr5.3:66314051-66314070 | MS.gene070056:intron | 55.0% | |
| GGAGAGGTTGTATGGAGGCT+TGG | - | chr5.3:66311202-66311221 | MS.gene070056:intron | 55.0% | |
| GGATGGGAGAGGTTGTATGG+AGG | - | chr5.3:66311197-66311216 | MS.gene070056:intron | 55.0% | |
| TACTCGGGTCATGCACAACC+CGG | + | chr5.3:66313131-66313150 | None:intergenic | 55.0% | |
| ! | CGAAGCACTAACACGGACAC+TGG | - | chr5.3:66315918-66315937 | MS.gene070056:intron | 55.0% |
| !! | AATGGATTGGCTGGAGCTGG+TGG | - | chr5.3:66310303-66310322 | MS.gene070056:CDS | 55.0% |
| !! | GGCAGTGGTGATGGATCAGT+TGG | - | chr5.3:66313719-66313738 | MS.gene070056:intron | 55.0% |
| CTCGGAGCTGTCGCTAAGCT+TGG | - | chr5.3:66315382-66315401 | MS.gene070056:intron | 60.0% | |
| GGCTTGGCGCCATCACTTGT+CGG | - | chr5.3:66311218-66311237 | MS.gene070056:intron | 60.0% | |
| ! | GATTGGCTGGAGCTGGTGGA+GGG | - | chr5.3:66310307-66310326 | MS.gene070056:CDS | 60.0% |
| ! | GTGTCGGTGCCCAAGACACT+CGG | - | chr5.3:66315983-66316002 | MS.gene070056:intron | 60.0% |
| !! | GGATTGGCTGGAGCTGGTGG+AGG | - | chr5.3:66310306-66310325 | MS.gene070056:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 66310285 | 66316378 | 66310285 | ID=MS.gene070056 |
| chr5.3 | mRNA | 66310285 | 66316378 | 66310285 | ID=MS.gene070056.t1;Parent=MS.gene070056 |
| chr5.3 | exon | 66316298 | 66316378 | 66316298 | ID=MS.gene070056.t1.exon1;Parent=MS.gene070056.t1 |
| chr5.3 | CDS | 66316298 | 66316378 | 66316298 | ID=cds.MS.gene070056.t1;Parent=MS.gene070056.t1 |
| chr5.3 | exon | 66316121 | 66316198 | 66316121 | ID=MS.gene070056.t1.exon2;Parent=MS.gene070056.t1 |
| chr5.3 | CDS | 66316121 | 66316198 | 66316121 | ID=cds.MS.gene070056.t1;Parent=MS.gene070056.t1 |
| chr5.3 | exon | 66315407 | 66315481 | 66315407 | ID=MS.gene070056.t1.exon3;Parent=MS.gene070056.t1 |
| chr5.3 | CDS | 66315407 | 66315481 | 66315407 | ID=cds.MS.gene070056.t1;Parent=MS.gene070056.t1 |
| chr5.3 | exon | 66312886 | 66313016 | 66312886 | ID=MS.gene070056.t1.exon4;Parent=MS.gene070056.t1 |
| chr5.3 | CDS | 66312886 | 66313016 | 66312886 | ID=cds.MS.gene070056.t1;Parent=MS.gene070056.t1 |
| chr5.3 | exon | 66312747 | 66312801 | 66312747 | ID=MS.gene070056.t1.exon5;Parent=MS.gene070056.t1 |
| chr5.3 | CDS | 66312747 | 66312801 | 66312747 | ID=cds.MS.gene070056.t1;Parent=MS.gene070056.t1 |
| chr5.3 | exon | 66312521 | 66312631 | 66312521 | ID=MS.gene070056.t1.exon6;Parent=MS.gene070056.t1 |
| chr5.3 | CDS | 66312521 | 66312631 | 66312521 | ID=cds.MS.gene070056.t1;Parent=MS.gene070056.t1 |
| chr5.3 | exon | 66311578 | 66311646 | 66311578 | ID=MS.gene070056.t1.exon7;Parent=MS.gene070056.t1 |
| chr5.3 | CDS | 66311578 | 66311646 | 66311578 | ID=cds.MS.gene070056.t1;Parent=MS.gene070056.t1 |
| chr5.3 | exon | 66311418 | 66311507 | 66311418 | ID=MS.gene070056.t1.exon8;Parent=MS.gene070056.t1 |
| chr5.3 | CDS | 66311418 | 66311507 | 66311418 | ID=cds.MS.gene070056.t1;Parent=MS.gene070056.t1 |
| chr5.3 | exon | 66311222 | 66311290 | 66311222 | ID=MS.gene070056.t1.exon9;Parent=MS.gene070056.t1 |
| chr5.3 | CDS | 66311222 | 66311290 | 66311222 | ID=cds.MS.gene070056.t1;Parent=MS.gene070056.t1 |
| chr5.3 | exon | 66310958 | 66311012 | 66310958 | ID=MS.gene070056.t1.exon10;Parent=MS.gene070056.t1 |
| chr5.3 | CDS | 66310958 | 66311012 | 66310958 | ID=cds.MS.gene070056.t1;Parent=MS.gene070056.t1 |
| chr5.3 | exon | 66310285 | 66310478 | 66310285 | ID=MS.gene070056.t1.exon11;Parent=MS.gene070056.t1 |
| chr5.3 | CDS | 66310285 | 66310478 | 66310285 | ID=cds.MS.gene070056.t1;Parent=MS.gene070056.t1 |
| Gene Sequence |
| Protein sequence |
