AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene35887


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35887.t1 MTR_5g073040 97.859 327 6 1 1 326 1 327 0.0 667
MS.gene35887.t1 MTR_8g092080 31.348 319 189 10 2 315 14 307 1.17e-38 139
MS.gene35887.t1 MTR_8g092080 30.208 192 123 4 30 216 125 310 6.49e-17 80.5
MS.gene35887.t1 MTR_1g097890 31.959 291 170 8 35 322 48 313 1.22e-37 137
MS.gene35887.t1 MTR_8g098240 32.609 276 174 6 40 313 322 587 2.57e-35 135
MS.gene35887.t1 MTR_8g098240 26.131 199 135 3 112 310 302 488 1.02e-12 69.3
MS.gene35887.t1 MTR_6g015860 28.621 290 181 6 24 293 3 286 1.16e-34 129
MS.gene35887.t1 MTR_6g015860 22.727 176 129 4 148 318 33 206 1.95e-11 64.3
MS.gene35887.t1 MTR_3g025800 29.254 335 196 7 23 323 11 338 2.24e-34 129
MS.gene35887.t1 MTR_7g015870 31.071 280 163 8 50 307 37 308 6.34e-34 127
MS.gene35887.t1 MTR_7g015870 26.396 197 134 6 128 319 25 215 5.66e-15 74.7
MS.gene35887.t1 MTR_7g015870 31.071 280 163 8 50 307 33 304 1.11e-33 126
MS.gene35887.t1 MTR_7g015870 25.381 197 136 5 128 319 21 211 8.26e-15 74.3
MS.gene35887.t1 MTR_5g009500 27.937 315 202 6 24 313 24 338 1.20e-32 124
MS.gene35887.t1 MTR_1g012030 28.070 285 183 7 38 313 139 410 1.09e-31 123
MS.gene35887.t1 MTR_3g107510 27.336 289 194 7 38 320 122 400 1.14e-31 122
MS.gene35887.t1 MTR_3g107510 26.108 203 131 7 20 211 199 393 6.91e-12 66.2
MS.gene35887.t1 MTR_6g034515 29.391 279 185 6 49 321 78 350 2.18e-30 118
MS.gene35887.t1 MTR_2g032610 31.023 303 174 11 30 307 21 313 2.03e-29 115
MS.gene35887.t1 MTR_8g027975 27.723 303 192 6 38 313 51 353 2.11e-28 113
MS.gene35887.t1 MTR_8g027975 24.510 204 142 5 117 313 39 237 5.98e-14 72.0
MS.gene35887.t1 MTR_4g114320 27.273 286 193 8 38 318 123 398 9.52e-27 109
MS.gene35887.t1 MTR_7g109135 29.965 287 184 9 40 313 24 306 3.58e-26 106
MS.gene35887.t1 MTR_3g098460 28.155 309 198 10 14 310 181 477 2.12e-25 106
MS.gene35887.t1 MTR_3g098460 29.348 184 120 4 38 212 299 481 1.30e-19 89.7
MS.gene35887.t1 MTR_3g098460 25.758 198 133 5 122 316 198 384 1.27e-12 68.6
MS.gene35887.t1 MTR_8g019480 27.653 311 173 7 52 318 47 349 3.62e-25 103
MS.gene35887.t1 MTR_8g019480 29.688 192 106 6 134 310 41 218 1.72e-12 67.8
MS.gene35887.t1 MTR_7g084400 25.974 308 199 7 17 311 192 483 4.15e-25 105
MS.gene35887.t1 MTR_7g084400 29.050 179 122 2 38 212 309 486 2.81e-19 88.6
MS.gene35887.t1 MTR_7g084400 29.255 188 128 3 134 320 215 398 1.29e-11 65.5
MS.gene35887.t1 MTR_8g096050 28.428 299 190 10 25 311 214 500 9.06e-25 104
MS.gene35887.t1 MTR_8g096050 28.962 183 122 2 38 212 321 503 1.30e-20 92.8
MS.gene35887.t1 MTR_4g119770 25.938 320 189 8 40 317 16 329 3.23e-24 101
MS.gene35887.t1 MTR_4g119770 23.113 212 138 4 28 215 119 329 7.15e-12 65.9
MS.gene35887.t1 MTR_2g436930 26.899 316 185 8 40 315 17 326 1.64e-23 99.0
MS.gene35887.t1 MTR_2g436930 25.238 210 132 4 29 214 119 327 1.47e-12 67.8
MS.gene35887.t1 MTR_2g436930 25.701 214 136 5 129 324 12 220 2.75e-12 67.0
MS.gene35887.t1 MTR_7g109135 28.214 280 191 6 40 313 24 299 2.52e-23 98.2
MS.gene35887.t1 MTR_7g064980 26.000 300 200 5 38 319 25 320 2.76e-23 98.2
MS.gene35887.t1 MTR_1g095780 28.028 289 178 8 39 320 526 791 5.86e-23 100
MS.gene35887.t1 MTR_4g057850 28.975 283 171 10 39 303 23 293 1.27e-22 96.3
MS.gene35887.t1 MTR_1g087840 27.737 274 179 6 54 313 35 303 3.37e-22 95.1
MS.gene35887.t1 MTR_1g087840 28.889 180 112 6 50 216 132 308 8.92e-11 62.4
MS.gene35887.t1 MTR_6g091800 25.667 300 189 7 38 314 19 307 9.75e-22 94.0
MS.gene35887.t1 MTR_8g066975 30.263 304 165 13 38 311 8 294 1.26e-21 93.2
MS.gene35887.t1 MTR_5g081150 27.148 291 188 9 38 310 34 318 3.63e-21 92.4
MS.gene35887.t1 MTR_5g081150 33.537 164 100 3 166 325 75 233 2.22e-14 73.2
MS.gene35887.t1 MTR_5g081150 29.148 223 137 6 8 215 109 325 4.10e-14 72.4
MS.gene35887.t1 MTR_5g055410 26.619 278 177 6 54 313 37 305 1.03e-20 91.7
MS.gene35887.t1 MTR_5g055410 31.111 180 107 7 54 218 135 312 1.32e-11 65.1
MS.gene35887.t1 MTR_7g068340 27.240 279 178 7 54 319 103 369 1.06e-20 92.0
MS.gene35887.t1 MTR_7g109135 30.603 232 148 8 91 313 1 228 2.72e-20 88.6
MS.gene35887.t1 MTR_7g109135 31.792 173 98 7 54 211 61 228 1.58e-11 63.9
MS.gene35887.t1 MTR_8g076760 26.087 276 180 9 52 307 28 299 1.19e-19 88.2
MS.gene35887.t1 MTR_3g100570 25.962 312 192 9 39 316 7 313 3.20e-19 87.0
MS.gene35887.t1 MTR_2g102010 28.302 265 160 7 39 287 18 268 3.32e-19 86.7
MS.gene35887.t1 MTR_2g102010 29.834 181 108 6 48 213 120 296 8.72e-15 73.9
MS.gene35887.t1 MTR_8g099910 26.214 309 195 8 22 312 51 344 4.58e-19 87.0
MS.gene35887.t1 MTR_5g030530 29.667 300 172 13 38 311 8 294 1.00e-18 85.1
MS.gene35887.t1 MTR_6g033280 26.897 290 185 6 33 310 58 332 2.24e-18 85.1
MS.gene35887.t1 MTR_6g091800 23.765 324 189 7 38 314 19 331 2.65e-18 84.7
MS.gene35887.t1 MTR_4g094578 24.211 285 191 6 38 310 29 300 3.77e-18 84.0
MS.gene35887.t1 MTR_3g104810 25.658 304 168 7 51 307 45 337 3.98e-18 84.3
MS.gene35887.t1 MTR_5g024770 25.704 284 174 6 33 310 16 268 4.73e-18 83.6
MS.gene35887.t1 MTR_4g005330 22.289 332 207 10 8 313 47 353 6.01e-18 84.0
MS.gene35887.t1 MTR_4g005330 22.074 299 197 8 39 313 1 287 2.06e-17 81.6
MS.gene35887.t1 MTR_6g034145 26.236 263 161 6 75 314 1 253 3.59e-17 80.1
MS.gene35887.t1 MTR_4g012850 27.308 260 170 6 38 287 16 266 3.66e-17 80.9
MS.gene35887.t1 MTR_4g012850 28.829 222 140 5 5 211 74 292 4.67e-16 77.8
MS.gene35887.t1 MTR_6g092210 26.848 257 161 6 75 314 1 247 4.81e-17 79.7
MS.gene35887.t1 MTR_2g436930 27.615 239 140 7 104 315 4 236 7.75e-17 79.0
MS.gene35887.t1 MTR_2g436930 25.238 210 132 4 29 214 29 237 8.57e-13 67.4
MS.gene35887.t1 MTR_3g104600 26.861 309 187 8 34 313 31 329 7.80e-17 80.5
MS.gene35887.t1 MTR_6g091800 26.250 240 143 7 38 254 19 247 2.97e-15 75.1
MS.gene35887.t1 MTR_6g091800 26.250 240 143 7 38 254 19 247 3.93e-15 74.7
MS.gene35887.t1 MTR_4g119770 26.295 251 144 7 40 255 16 260 4.96e-15 74.3
MS.gene35887.t1 MTR_4g119770 24.074 216 139 4 129 324 11 221 4.12e-11 62.8
MS.gene35887.t1 MTR_5g081150 33.537 164 100 3 166 325 75 233 8.24e-15 73.6
MS.gene35887.t1 MTR_7g066690 26.263 297 182 12 40 314 19 300 8.83e-15 73.9
MS.gene35887.t1 MTR_5g081150 33.537 164 100 3 166 325 75 233 9.29e-15 73.6
MS.gene35887.t1 MTR_7g083790 26.224 286 183 7 40 312 83 353 1.17e-14 74.3
MS.gene35887.t1 MTR_4g088545 27.178 287 186 7 39 307 13 294 1.77e-14 73.2
MS.gene35887.t1 MTR_1g088995 29.258 229 146 6 33 255 32 250 2.39e-14 72.8
MS.gene35887.t1 MTR_4g016730 24.908 273 170 7 54 313 105 355 2.96e-14 73.2
MS.gene35887.t1 MTR_4g016730 22.222 180 126 3 30 209 188 353 1.62e-11 65.1
MS.gene35887.t1 MTR_8g068890 24.841 314 191 8 39 316 11 315 3.03e-14 72.8
MS.gene35887.t1 MTR_5g032420 24.688 320 191 7 39 316 11 322 6.33e-14 71.6
MS.gene35887.t1 MTR_1g090330 22.887 284 191 8 42 307 18 291 6.35e-14 71.6
MS.gene35887.t1 MTR_4g018750 26.102 295 181 13 40 312 17 296 1.36e-13 70.5
MS.gene35887.t1 MTR_3g462140 29.012 162 108 3 54 209 136 296 2.74e-13 69.7
MS.gene35887.t1 MTR_3g462140 25.413 303 194 11 32 314 9 299 6.91e-12 65.5
MS.gene35887.t1 MTR_7g084400 25.123 203 137 4 17 209 186 383 1.87e-12 68.2
MS.gene35887.t1 MTR_7g084400 29.255 188 128 3 134 320 209 392 1.82e-11 65.1
MS.gene35887.t1 MTR_8g090210 25.753 299 188 9 33 310 109 394 2.91e-12 67.4
MS.gene35887.t1 MTR_8g090210 27.322 183 121 5 131 311 109 281 4.05e-11 63.9
MS.gene35887.t1 MTR_3g074490 25.888 197 126 6 131 321 115 297 1.06e-11 65.9
MS.gene35887.t1 MTR_3g074490 25.743 303 183 11 33 310 115 400 5.23e-11 63.5
MS.gene35887.t1 MTR_7g109135 31.792 173 98 7 54 211 40 207 1.40e-11 63.5
MS.gene35887.t1 MTR_6g091910 26.974 152 106 1 163 314 63 209 1.46e-11 63.5
MS.gene35887.t1 MTR_4g088545 27.273 242 157 6 39 262 13 253 1.64e-11 64.3
MS.gene35887.t1 MTR_3g090820 25.781 256 157 8 82 310 135 384 2.03e-11 64.7
MS.gene35887.t1 MTR_4g018750 25.957 235 144 10 40 252 17 243 4.67e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene35887.t1 AT1G07030 73.231 325 74 4 1 317 1 320 1.43e-164 461
MS.gene35887.t1 AT1G07030 28.788 198 125 7 128 322 38 222 1.60e-12 67.8
MS.gene35887.t1 AT2G30160 70.149 335 82 3 1 322 1 330 2.62e-161 453
MS.gene35887.t1 AT1G07025 47.500 160 82 2 24 182 8 166 4.00e-38 133
MS.gene35887.t1 AT1G34065 30.208 288 173 8 35 319 72 334 1.76e-37 137
MS.gene35887.t1 AT1G34065 30.476 210 132 5 14 218 135 335 4.83e-18 84.0
MS.gene35887.t1 AT1G34065 30.208 288 173 8 35 319 79 341 2.22e-37 137
MS.gene35887.t1 AT1G34065 30.476 210 132 5 14 218 142 342 6.14e-18 83.6
MS.gene35887.t1 AT4G39460 31.900 279 162 8 35 310 55 308 4.16e-36 133
MS.gene35887.t1 AT4G39460 30.415 217 133 6 14 223 118 323 1.73e-16 79.3
MS.gene35887.t1 AT4G39460 31.900 279 162 8 35 310 55 308 4.16e-36 133
MS.gene35887.t1 AT4G39460 30.415 217 133 6 14 223 118 323 1.73e-16 79.3
MS.gene35887.t1 AT4G39460 31.900 279 162 8 35 310 55 308 4.16e-36 133
MS.gene35887.t1 AT4G39460 30.415 217 133 6 14 223 118 323 1.73e-16 79.3
MS.gene35887.t1 AT1G74240 30.000 320 187 6 27 315 25 338 1.25e-34 130
MS.gene35887.t1 AT4G11440 30.508 295 193 7 24 313 316 603 2.24e-33 130
MS.gene35887.t1 AT4G11440 30.508 295 193 7 24 313 316 603 2.24e-33 130
MS.gene35887.t1 AT4G32400 28.472 288 190 6 38 319 114 391 3.57e-33 126
MS.gene35887.t1 AT4G32400 26.042 192 124 7 38 218 208 392 1.55e-11 65.1
MS.gene35887.t1 AT5G15640 28.947 304 185 7 30 307 8 306 9.21e-31 118
MS.gene35887.t1 AT5G15640 29.097 299 186 6 30 307 20 313 1.03e-30 118
MS.gene35887.t1 AT1G74240 29.831 295 170 6 52 315 2 290 1.50e-29 115
MS.gene35887.t1 AT4G01100 28.344 314 184 7 38 310 42 355 2.67e-27 110
MS.gene35887.t1 AT4G01100 25.000 204 129 5 135 317 46 246 9.21e-12 65.9
MS.gene35887.t1 AT4G01100 28.383 303 190 8 38 313 42 344 9.60e-27 108
MS.gene35887.t1 AT4G01100 26.842 190 129 4 135 317 46 232 1.07e-14 74.3
MS.gene35887.t1 AT2G37890 26.936 297 199 5 32 313 39 332 2.99e-26 107
MS.gene35887.t1 AT2G37890 31.720 186 116 4 38 214 152 335 6.46e-21 92.0
MS.gene35887.t1 AT2G37890 32.237 152 89 3 172 316 92 236 3.70e-13 69.7
MS.gene35887.t1 AT3G55640 26.174 298 200 6 38 319 38 331 3.52e-26 106
MS.gene35887.t1 AT3G55640 26.174 298 200 6 38 319 38 331 3.52e-26 106
MS.gene35887.t1 AT5G42130 26.690 281 191 8 49 321 129 402 4.27e-26 107
MS.gene35887.t1 AT5G26200 27.113 284 176 5 51 307 52 331 9.04e-26 105
MS.gene35887.t1 AT2G47490 30.292 274 171 7 54 313 33 300 1.13e-25 104
MS.gene35887.t1 AT2G47490 31.638 177 101 7 50 211 129 300 1.54e-11 64.7
MS.gene35887.t1 AT1G72820 27.986 293 171 7 51 307 44 332 3.67e-25 103
MS.gene35887.t1 AT1G72820 27.986 293 171 7 51 307 44 332 3.67e-25 103
MS.gene35887.t1 AT4G01100 28.231 294 184 8 47 313 1 294 1.80e-24 101
MS.gene35887.t1 AT4G01100 28.205 195 114 4 40 208 97 291 3.97e-18 83.6
MS.gene35887.t1 AT4G01100 25.683 183 127 3 142 317 2 182 2.93e-14 72.8
MS.gene35887.t1 AT5G61810 24.458 323 203 7 17 310 19 329 5.78e-23 97.8
MS.gene35887.t1 AT5G61810 25.140 179 127 4 38 211 156 332 4.62e-13 69.3
MS.gene35887.t1 AT1G25380 28.159 277 179 6 54 315 37 308 7.17e-23 97.8
MS.gene35887.t1 AT1G25380 29.167 192 115 7 50 223 133 321 1.62e-11 65.1
MS.gene35887.t1 AT1G25380 28.159 277 179 6 54 315 37 308 7.17e-23 97.8
MS.gene35887.t1 AT1G25380 29.167 192 115 7 50 223 133 321 1.62e-11 65.1
MS.gene35887.t1 AT5G51050 25.150 334 200 9 17 314 177 496 1.05e-22 98.6
MS.gene35887.t1 AT5G51050 28.218 202 133 4 121 319 215 407 1.86e-13 71.2
MS.gene35887.t1 AT2G17270 26.148 283 180 7 39 310 23 287 2.07e-22 95.9
MS.gene35887.t1 AT5G61810 24.383 324 204 7 17 311 162 473 2.29e-22 97.8
MS.gene35887.t1 AT5G61810 25.140 179 127 4 38 211 299 475 7.44e-13 69.3
MS.gene35887.t1 AT1G79900 31.405 242 144 7 53 287 31 257 3.56e-22 94.7
MS.gene35887.t1 AT1G79900 30.653 199 118 5 25 216 103 288 7.54e-20 88.6
MS.gene35887.t1 AT3G53940 27.797 295 187 8 38 313 73 360 3.93e-22 95.9
MS.gene35887.t1 AT3G53940 31.892 185 117 4 38 214 180 363 2.00e-20 91.3
MS.gene35887.t1 AT3G53940 29.697 165 108 2 166 326 114 274 6.96e-14 72.0
MS.gene35887.t1 AT5G01500 28.090 267 172 7 54 313 135 388 5.43e-21 93.2
MS.gene35887.t1 AT2G35800 26.962 293 195 7 24 314 531 806 7.08e-21 94.0
MS.gene35887.t1 AT1G14560 26.207 290 180 7 51 314 40 321 2.53e-20 90.5
MS.gene35887.t1 AT1G14560 23.590 195 125 2 38 208 123 317 4.18e-14 72.4
MS.gene35887.t1 AT5G46800 29.412 306 174 11 35 311 5 297 3.21e-20 89.7
MS.gene35887.t1 AT5G46800 29.412 306 174 11 35 311 5 297 3.21e-20 89.7
MS.gene35887.t1 AT5G46800 29.412 306 174 11 35 311 5 297 3.21e-20 89.7
MS.gene35887.t1 AT3G20240 23.684 304 198 7 39 319 53 345 4.37e-20 89.7
MS.gene35887.t1 AT3G51870 25.368 272 185 5 54 319 107 366 2.10e-19 88.2
MS.gene35887.t1 AT3G51870 22.283 184 131 3 30 209 183 358 4.50e-12 66.6
MS.gene35887.t1 AT5G07320 26.667 270 180 8 47 311 218 474 9.17e-19 87.0
MS.gene35887.t1 AT5G07320 24.719 178 129 2 38 211 300 476 2.07e-12 68.2
MS.gene35887.t1 AT4G26180 25.839 298 184 10 38 310 21 306 9.40e-19 85.9
MS.gene35887.t1 AT4G24570 26.250 320 177 9 39 316 11 313 2.52e-18 84.3
MS.gene35887.t1 AT5G66380 24.272 309 205 10 35 321 7 308 2.97e-18 84.3
MS.gene35887.t1 AT5G01340 25.532 282 185 8 39 304 18 290 3.19e-18 84.0
MS.gene35887.t1 AT5G14040 25.796 314 202 8 15 312 55 353 1.79e-17 82.8
MS.gene35887.t1 AT5G09470 25.887 282 181 6 54 315 61 334 2.12e-17 82.0
MS.gene35887.t1 AT2G26360 25.448 279 186 6 33 307 110 370 2.43e-17 82.4
MS.gene35887.t1 AT1G14560 26.236 263 160 7 51 287 40 294 1.51e-16 79.3
MS.gene35887.t1 AT1G14560 31.250 176 106 4 148 310 43 216 3.47e-12 66.6
MS.gene35887.t1 AT1G14560 23.392 171 107 2 38 184 123 293 9.29e-11 62.4
MS.gene35887.t1 AT4G26180 25.818 275 167 10 38 287 21 283 1.68e-16 79.0
MS.gene35887.t1 AT4G26180 26.738 187 123 4 135 310 25 208 7.00e-11 62.4
MS.gene35887.t1 AT3G48850 23.944 284 189 5 39 310 72 340 5.14e-16 78.2
MS.gene35887.t1 AT5G48970 24.611 321 191 10 40 318 24 335 8.29e-16 77.4
MS.gene35887.t1 AT5G48970 24.887 221 143 4 123 325 13 228 2.30e-13 70.5
MS.gene35887.t1 AT2G22500 24.516 310 195 8 39 317 11 312 1.40e-15 76.6
MS.gene35887.t1 AT3G21390 23.344 317 195 9 40 314 21 331 2.42e-15 76.3
MS.gene35887.t1 AT3G21390 25.352 213 138 4 123 319 10 217 3.69e-12 66.6
MS.gene35887.t1 AT3G21390 23.344 317 195 9 40 314 43 353 4.10e-15 75.5
MS.gene35887.t1 AT3G21390 25.352 213 138 4 123 319 32 239 5.15e-12 66.6
MS.gene35887.t1 AT1G14560 23.590 195 125 2 38 208 25 219 9.69e-15 72.8
MS.gene35887.t1 AT3G55640 30.519 154 99 3 166 315 79 228 2.02e-14 72.4
MS.gene35887.t1 AT3G55640 30.519 154 99 3 166 315 79 228 2.02e-14 72.4
MS.gene35887.t1 AT5G48970 25.461 271 164 8 77 318 3 264 3.14e-14 72.0
MS.gene35887.t1 AT4G03115 26.383 235 158 6 25 255 29 252 3.69e-14 72.4
MS.gene35887.t1 AT3G53940 29.697 165 108 2 166 326 114 274 3.93e-14 72.0
MS.gene35887.t1 AT3G54110 24.000 300 193 9 42 320 19 304 5.28e-14 72.0
MS.gene35887.t1 AT3G54110 25.683 183 130 2 38 214 118 300 4.92e-12 66.2
MS.gene35887.t1 AT4G03115 26.383 235 158 6 25 255 61 284 5.63e-14 72.4
MS.gene35887.t1 AT2G33820 24.832 298 193 9 27 301 7 296 1.73e-13 70.5
MS.gene35887.t1 AT4G27940 27.607 163 92 3 163 307 146 300 8.63e-13 68.9
MS.gene35887.t1 AT4G03115 28.000 175 120 3 82 255 12 181 1.83e-12 66.6
MS.gene35887.t1 AT4G03115 28.000 175 120 3 82 255 20 189 2.00e-12 66.6
MS.gene35887.t1 AT5G58970 24.503 302 195 11 32 313 10 298 3.15e-12 66.6
MS.gene35887.t1 AT1G14140 24.483 290 188 10 38 307 16 294 6.59e-12 65.9
MS.gene35887.t1 AT5G56450 25.275 182 127 4 39 212 146 326 6.80e-12 65.9
MS.gene35887.t1 AT2G33820 24.183 306 193 10 27 301 7 304 5.19e-11 63.2
MS.gene35887.t1 AT2G33820 28.415 183 118 4 134 307 20 198 9.87e-11 62.0

Find 82 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTGGCAATTCATGATTTC+TGG 0.143348 5.1:-56264379 MS.gene35887:CDS
CTGACGGAAACGGATTTAAT+TGG 0.211854 5.1:+56264274 None:intergenic
CTTTCTGCTCGTTGTAATCT+TGG 0.231051 5.1:+56260298 None:intergenic
GTTGAGTAATAGTGGTTATA+AGG 0.239383 5.1:-56264008 MS.gene35887:CDS
GTGAAATCAGGTCGGTAATC+TGG 0.268484 5.1:+56264445 None:intergenic
GCGAAATGCACAGCAGTAAA+AGG 0.303287 5.1:+56263896 None:intergenic
CTCGTTGTAATCTTGGAAAA+AGG 0.310351 5.1:+56260305 None:intergenic
TACAACGAGCAGAAAGATTC+TGG 0.317286 5.1:-56260291 MS.gene35887:CDS
GGTATCGGCGCAATGGGCCT+TGG 0.320857 5.1:-56264199 MS.gene35887:CDS
GCTACTGCCGGGGCGGCTGC+TGG 0.323395 5.1:-56263797 MS.gene35887:CDS
TGTTAAAACAATAGTGAAAA+AGG 0.326887 5.1:-56260424 MS.gene35887:CDS
AATGGGCCTTGGCGCCGGTC+CGG 0.341444 5.1:-56264188 MS.gene35887:CDS
ATGATTTCTGGATCCATTGC+TGG 0.344227 5.1:-56264367 MS.gene35887:CDS
GGCGTTAAGTTTGTGAAATC+AGG 0.351974 5.1:+56264433 None:intergenic
GGCGCAATGGGCCTTGGCGC+CGG 0.356819 5.1:-56264193 MS.gene35887:CDS
CTCCCGCAGCCGCTATCTGC+TGG 0.375742 5.1:-56260350 MS.gene35887:CDS
CTGCCGGGGCGGCTGCTGGT+GGG 0.377867 5.1:-56263793 MS.gene35887:CDS
TGCGCCGATACCGCGGTATA+AGG 0.382409 5.1:+56264210 None:intergenic
AGTGTTTACGCCGATGGATA+TGG 0.393475 5.1:-56264047 MS.gene35887:CDS
ACTGCCGGGGCGGCTGCTGG+TGG 0.398253 5.1:-56263794 MS.gene35887:CDS
CGGGGCGGCTGCTGGTGGGT+TGG 0.405879 5.1:-56263789 MS.gene35887:CDS
CTCTCATCATCAACACTCTC+TGG 0.417304 5.1:+56263833 None:intergenic
TTGATTGTTCATGCTACTGC+CGG 0.428369 5.1:-56263809 MS.gene35887:CDS
CAACCCACCAGCAGCCGCCC+CGG 0.433417 5.1:+56263790 None:intergenic
AAACTTTGTTCTTGCTTCTG+TGG 0.444930 5.1:+56264474 None:intergenic
TACCGCGGTATCGGCGCAAT+GGG 0.459673 5.1:-56264205 MS.gene35887:CDS
TGTTCTTGCTTCTGTGGCCA+TGG 0.460311 5.1:+56264480 None:intergenic
CGTGGGCCGGACCGGCGCCA+AGG 0.462222 5.1:+56264182 None:intergenic
TCGTGAGTTGACGGCGGCGC+CGG 0.465043 5.1:+56264412 None:intergenic
ATAAACAGCGTGGGCCGGAC+CGG 0.468252 5.1:+56264174 None:intergenic
TGAAATCAGGTCGGTAATCT+GGG 0.470095 5.1:+56264446 None:intergenic
TTGAGTAATAGTGGTTATAA+GGG 0.471100 5.1:-56264007 MS.gene35887:CDS
CTCACGACGGTCTTCACTAC+TGG 0.471340 5.1:-56264396 MS.gene35887:CDS
AGGTTGCAGTTGAGTAATAG+TGG 0.471563 5.1:-56264016 MS.gene35887:CDS
GGAGCATGAAAGAGCATCCT+TGG 0.472086 5.1:+56260369 None:intergenic
TCATGCGAGGGTGGGTTCCA+AGG 0.475084 5.1:-56260386 MS.gene35887:CDS
AAGAGCTTGACTGACGGAAA+CGG 0.478473 5.1:+56264264 None:intergenic
TGATTGTTCATGCTACTGCC+GGG 0.479934 5.1:-56263808 MS.gene35887:CDS
GTATAAGGCAGACGGGCCTT+CGG 0.490929 5.1:+56264225 None:intergenic
TGCTGGTCTACATATGAAGC+TGG 0.491218 5.1:-56260333 MS.gene35887:CDS
TTTCCGTCAGTCAAGCTCTT+CGG 0.494358 5.1:-56264261 MS.gene35887:CDS
GACCAGCAGATAGCGGCTGC+GGG 0.507968 5.1:+56260348 None:intergenic
ACTTATGAAGCTGCGAAAAG+AGG 0.510074 5.1:-56263872 MS.gene35887:CDS
TCTGCCTTATACCGCGGTAT+CGG 0.511096 5.1:-56264214 MS.gene35887:CDS
AGACCAGCAGATAGCGGCTG+CGG 0.512887 5.1:+56260347 None:intergenic
CTTATGAAGCTGCGAAAAGA+GGG 0.516796 5.1:-56263871 MS.gene35887:CDS
TAAAACTCAATTGCAATGCC+AGG 0.525231 5.1:-56263735 MS.gene35887:intron
ACAAAGGGCTCATGCGAGGG+TGG 0.536925 5.1:-56260395 MS.gene35887:CDS
GAGAAATAAACAGCGTGGGC+CGG 0.537692 5.1:+56264169 None:intergenic
AGGTTCAAAAGTGGTTCCAT+TGG 0.544925 5.1:-56260453 MS.gene35887:CDS
CTCTGTTTCACCATATCCAT+CGG 0.552176 5.1:+56264037 None:intergenic
TTCATGGTGCAGGGTGTGTG+TGG 0.554065 5.1:-56260483 MS.gene35887:intron
TGACGCAGTGTTTACGCCGA+TGG 0.559443 5.1:-56264053 MS.gene35887:CDS
TGAAGACCGTCGTGAGTTGA+CGG 0.559910 5.1:+56264403 None:intergenic
TTTAATTGGACAAGATGTGA+TGG 0.562571 5.1:+56264288 None:intergenic
ATACCGCGGTATCGGCGCAA+TGG 0.570095 5.1:-56264206 MS.gene35887:CDS
AGGGTGTGTGTGGATGTGAT+AGG 0.574367 5.1:-56260473 MS.gene35887:CDS
GGCCCATTGCGCCGATACCG+CGG 0.581793 5.1:+56264203 None:intergenic
CGGTCAATCTTAAAATCCGA+AGG 0.591376 5.1:-56264241 MS.gene35887:CDS
GTGTTCGATACAACCAGCAA+TGG 0.594126 5.1:+56264354 None:intergenic
TGCTGGTTGTATCGAACACA+TGG 0.602280 5.1:-56264350 MS.gene35887:CDS
AACTGAGAAATAAACAGCGT+GGG 0.604326 5.1:+56264165 None:intergenic
CAAAGGGCTCATGCGAGGGT+GGG 0.612108 5.1:-56260394 MS.gene35887:CDS
TACCGCGGTATAAGGCAGAC+GGG 0.621026 5.1:+56264218 None:intergenic
TGATTTCACAAACTTAACGC+CGG 0.621178 5.1:-56264431 MS.gene35887:CDS
TGGTTCGGGTGTTTGTGCGA+CGG 0.622075 5.1:-56264083 MS.gene35887:CDS
GGATACAAAGGGCTCATGCG+AGG 0.624051 5.1:-56260399 MS.gene35887:CDS
GGCCCGTCTGCCTTATACCG+CGG 0.625142 5.1:-56264220 MS.gene35887:CDS
GATTGTTCATGCTACTGCCG+GGG 0.628010 5.1:-56263807 MS.gene35887:CDS
TGACCGAAGAGCTTGACTGA+CGG 0.634127 5.1:+56264258 None:intergenic
GATACAAAGGGCTCATGCGA+GGG 0.636199 5.1:-56260398 MS.gene35887:CDS
ATACCGCGGTATAAGGCAGA+CGG 0.640078 5.1:+56264217 None:intergenic
TGTTCATGCTACTGCCGGGG+CGG 0.649622 5.1:-56263804 MS.gene35887:CDS
CAGAGAGTGTTGATGATGAG+AGG 0.663254 5.1:-56263832 MS.gene35887:CDS
TTCGGGTGTTTGTGCGACGG+TGG 0.664905 5.1:-56264080 MS.gene35887:CDS
ATATGTAGACCAGCAGATAG+CGG 0.675850 5.1:+56260341 None:intergenic
GGATGTGATAGGTTCAAAAG+TGG 0.680142 5.1:-56260462 MS.gene35887:CDS
AAACTGAGAAATAAACAGCG+TGG 0.696014 5.1:+56264164 None:intergenic
CGATGGATATGGTGAAACAG+AGG 0.697564 5.1:-56264036 MS.gene35887:CDS
TTAAGTTTGTGAAATCAGGT+CGG 0.707755 5.1:+56264437 None:intergenic
AGACCGTCGTGAGTTGACGG+CGG 0.717166 5.1:+56264406 None:intergenic
GCGCCGCCGTCAACTCACGA+CGG 0.745640 5.1:-56264409 MS.gene35887:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTCTTTTAGGTTATTTTT+AGG + chr5.1:56261644-56261663 None:intergenic 15.0%
!!! GATTATTTGTTATTTTTTGT+TGG - chr5.1:56263923-56263942 MS.gene35887:CDS 15.0%
!!! TTCTTTTCTTTATTTCTTTT+AGG + chr5.1:56261655-56261674 None:intergenic 15.0%
!!! TTTCTTTTAGGTTATTTTTA+GGG + chr5.1:56261643-56261662 None:intergenic 15.0%
!! AAAGAATGATTGTAAATGAA+GGG - chr5.1:56264184-56264203 MS.gene35887:CDS 20.0%
!! AAATTGTTTACTACTCAAAT+AGG - chr5.1:56263636-56263655 MS.gene35887:intron 20.0%
!! AATTCATAATATATGTTGAG+GGG - chr5.1:56262639-56262658 MS.gene35887:intron 20.0%
!! ATTAGGTTAAATTACACATT+TGG + chr5.1:56263865-56263884 None:intergenic 20.0%
!! GAATTCATAATATATGTTGA+GGG - chr5.1:56262638-56262657 MS.gene35887:intron 20.0%
!! TAAAGAATGATTGTAAATGA+AGG - chr5.1:56264183-56264202 MS.gene35887:CDS 20.0%
!! TGATTCATTATAAGATGTTA+TGG - chr5.1:56262393-56262412 MS.gene35887:intron 20.0%
!! TGTTAAAACAATAGTGAAAA+AGG - chr5.1:56264332-56264351 MS.gene35887:CDS 20.0%
!!! AAAAGGTTTTAAATCTGATT+AGG - chr5.1:56263901-56263920 MS.gene35887:CDS 20.0%
!!! AAAGTTTTACGATTTTTGAT+AGG + chr5.1:56263470-56263489 None:intergenic 20.0%
!!! AAGATTTTTGTTATTCTTGT+TGG - chr5.1:56262460-56262479 MS.gene35887:intron 20.0%
!!! AATTATTCTTTGTTCTGTTT+TGG + chr5.1:56263806-56263825 None:intergenic 20.0%
!!! ACAAAAATCTTTTTCAACTT+AGG + chr5.1:56262451-56262470 None:intergenic 20.0%
!!! ACTCAAGATGTTATTTTATT+TGG - chr5.1:56264076-56264095 MS.gene35887:CDS 20.0%
!!! ACTTTTATTATACGAATGTT+TGG - chr5.1:56264116-56264135 MS.gene35887:CDS 20.0%
!!! ATGTGAGAATTTCTTTTTAA+GGG + chr5.1:56260624-56260643 None:intergenic 20.0%
!!! TAAATTTTAAACCGTTTCTA+GGG + chr5.1:56261930-56261949 None:intergenic 20.0%
!!! TAGAAACGGTTTAAAATTTA+GGG - chr5.1:56261930-56261949 MS.gene35887:intron 20.0%
!!! TATTCCCTATCTATTTTATA+GGG - chr5.1:56262599-56262618 MS.gene35887:intron 20.0%
!!! TATTTTTCAGTACTATTTAC+AGG - chr5.1:56263694-56263713 MS.gene35887:intron 20.0%
!!! TTGTGGAATGAAATTTTTTT+GGG - chr5.1:56261805-56261824 MS.gene35887:intron 20.0%
! AAAACAATAGTGAAAAAGGA+CGG - chr5.1:56264336-56264355 MS.gene35887:CDS 25.0%
! AAAAGCCCTATAAAATAGAT+AGG + chr5.1:56262607-56262626 None:intergenic 25.0%
! AAAGCCCTATAAAATAGATA+GGG + chr5.1:56262606-56262625 None:intergenic 25.0%
! AAGAATGATTGTAAATGAAG+GGG - chr5.1:56264185-56264204 MS.gene35887:CDS 25.0%
! AATTGACATAATAATGAAGC+TGG - chr5.1:56262896-56262915 MS.gene35887:intron 25.0%
! ACATATAAAATTGACACCAT+TGG + chr5.1:56262576-56262595 None:intergenic 25.0%
! ATATTGTTTGATATGGTCTA+TGG - chr5.1:56264018-56264037 MS.gene35887:CDS 25.0%
! CTTAAAAAGAAATTCTCACA+TGG - chr5.1:56260623-56260642 MS.gene35887:intron 25.0%
! CTTCATATGCTAAACTTTAA+AGG + chr5.1:56261162-56261181 None:intergenic 25.0%
! GAAACCACAAAATTAGTTAA+GGG - chr5.1:56263838-56263857 MS.gene35887:CDS 25.0%
! GGAATTCATAATATATGTTG+AGG - chr5.1:56262637-56262656 MS.gene35887:intron 25.0%
! TCAAATTACACTACACTATA+GGG + chr5.1:56261285-56261304 None:intergenic 25.0%
! TCGTTTGATCAGAAAATATT+AGG + chr5.1:56263882-56263901 None:intergenic 25.0%
! TGAAACCACAAAATTAGTTA+AGG - chr5.1:56263837-56263856 MS.gene35887:CDS 25.0%
! TGAAGCAAATGATATTAGTA+GGG - chr5.1:56262252-56262271 MS.gene35887:intron 25.0%
! TGGACTAAATAGTATATCAT+AGG + chr5.1:56261321-56261340 None:intergenic 25.0%
! TGTTGTCATATTGTTTGATA+TGG - chr5.1:56264011-56264030 MS.gene35887:CDS 25.0%
! TTCAAATTACACTACACTAT+AGG + chr5.1:56261286-56261305 None:intergenic 25.0%
! TTGAGTAATAGTGGTTATAA+GGG - chr5.1:56260749-56260768 MS.gene35887:intron 25.0%
! TTTACATATATGTATGCCAT+TGG - chr5.1:56263725-56263744 MS.gene35887:intron 25.0%
!! ATGTGCTCTTTTAATGAATT+TGG - chr5.1:56261191-56261210 MS.gene35887:intron 25.0%
!! CATGTGAGAATTTCTTTTTA+AGG + chr5.1:56260625-56260644 None:intergenic 25.0%
!! CTAAATTTTAAACCGTTTCT+AGG + chr5.1:56261931-56261950 None:intergenic 25.0%
!! CTAGAAACGGTTTAAAATTT+AGG - chr5.1:56261929-56261948 MS.gene35887:intron 25.0%
!! CTATTCCCTATCTATTTTAT+AGG - chr5.1:56262598-56262617 MS.gene35887:intron 25.0%
!! TAACAATTATTTTCAGACAG+TGG + chr5.1:56263990-56264009 None:intergenic 25.0%
!! TATTTTCTGATCAAACGAAA+AGG - chr5.1:56263884-56263903 MS.gene35887:CDS 25.0%
!! TGTGCTCTTTTAATGAATTT+GGG - chr5.1:56261192-56261211 MS.gene35887:intron 25.0%
!!! AAATCTTTTTCAACTTAGGA+TGG + chr5.1:56262447-56262466 None:intergenic 25.0%
!!! AATGGTTTTGAAAAATTAGG+GGG - chr5.1:56262505-56262524 MS.gene35887:intron 25.0%
!!! AATTTTGTTGTTTGAACCAA+TGG - chr5.1:56262557-56262576 MS.gene35887:intron 25.0%
!!! ACAGAATTGTTGATTTTTGT+CGG - chr5.1:56263751-56263770 MS.gene35887:CDS 25.0%
!!! ATAGGGCTTTTTTGTTAAAT+TGG - chr5.1:56262616-56262635 MS.gene35887:intron 25.0%
!!! GAATGGTTTTGAAAAATTAG+GGG - chr5.1:56262504-56262523 MS.gene35887:intron 25.0%
!!! GGAATGGTTTTGAAAAATTA+GGG - chr5.1:56262503-56262522 MS.gene35887:intron 25.0%
!!! GGTGGAATATATTTTTTCTT+AGG + chr5.1:56262960-56262979 None:intergenic 25.0%
!!! GTTGCTATTTGACAATATTT+TGG + chr5.1:56261341-56261360 None:intergenic 25.0%
!!! GTTGTGGAATGAAATTTTTT+TGG - chr5.1:56261804-56261823 MS.gene35887:intron 25.0%
!!! TATTTTTTGTTGGAGCATTA+TGG - chr5.1:56263933-56263952 MS.gene35887:CDS 25.0%
AACTTATCAAGGAAAATGCA+TGG - chr5.1:56263407-56263426 MS.gene35887:intron 30.0%
ACCAACTAAAGTAAAGTTAG+GGG - chr5.1:56263779-56263798 MS.gene35887:CDS 30.0%
AGAGAGAGAGAAATAAATAC+AGG - chr5.1:56263591-56263610 MS.gene35887:intron 30.0%
CAAATTACACTACACTATAG+GGG + chr5.1:56261284-56261303 None:intergenic 30.0%
GACCAACTAAAGTAAAGTTA+GGG - chr5.1:56263778-56263797 MS.gene35887:CDS 30.0%
GAGAGAGAGAAATAAATACA+GGG - chr5.1:56263592-56263611 MS.gene35887:intron 30.0%
GAGATAAGAAAGAATCAAGT+GGG + chr5.1:56263041-56263060 None:intergenic 30.0%
GGGTATTACAAATATAAGGT+TGG - chr5.1:56262287-56262306 MS.gene35887:intron 30.0%
GTGAAGCAAATGATATTAGT+AGG - chr5.1:56262251-56262270 MS.gene35887:intron 30.0%
GTTGAGTAATAGTGGTTATA+AGG - chr5.1:56260748-56260767 MS.gene35887:intron 30.0%
TAAGACATCTGCTTTGATTA+AGG + chr5.1:56261398-56261417 None:intergenic 30.0%
TCAAACTATTACGAGAGATT+TGG - chr5.1:56262343-56262362 MS.gene35887:intron 30.0%
TCAACAATTCTGTTAACCAA+TGG + chr5.1:56263744-56263763 None:intergenic 30.0%
TCTTATCTCATACAAGAAGT+TGG - chr5.1:56263052-56263071 MS.gene35887:intron 30.0%
TGACCAACTAAAGTAAAGTT+AGG - chr5.1:56263777-56263796 MS.gene35887:CDS 30.0%
TGAGATAAGAAAGAATCAAG+TGG + chr5.1:56263042-56263061 None:intergenic 30.0%
TGGAGAATTGATCTTAACAT+TGG - chr5.1:56264249-56264268 MS.gene35887:CDS 30.0%
TTAAGTTTGTGAAATCAGGT+CGG + chr5.1:56260322-56260341 None:intergenic 30.0%
TTGGATAGTTGTAGAGTTAT+GGG - chr5.1:56262306-56262325 MS.gene35887:intron 30.0%
TTTAATTGGACAAGATGTGA+TGG + chr5.1:56260471-56260490 None:intergenic 30.0%
! CTATCTAAACTAGTACTGAA+AGG + chr5.1:56263530-56263549 None:intergenic 30.0%
! GATATTAGTAGGGCTTTAAT+TGG - chr5.1:56262262-56262281 MS.gene35887:intron 30.0%
! GGTAGGGTATTACAAATATA+AGG - chr5.1:56262283-56262302 MS.gene35887:intron 30.0%
! TGCATTTTCCTTGATAAGTT+TGG + chr5.1:56263407-56263426 None:intergenic 30.0%
!! GTGCTTTTTATGCTAGTTAT+AGG - chr5.1:56260816-56260835 MS.gene35887:intron 30.0%
!! TGAGTTTTAACAACATCAAG+CGG + chr5.1:56261010-56261029 None:intergenic 30.0%
!! TGTTTTTGATTGTGTGAAGA+GGG - chr5.1:56260772-56260791 MS.gene35887:intron 30.0%
!!! GGGAATGGTTTTGAAAAATT+AGG - chr5.1:56262502-56262521 MS.gene35887:intron 30.0%
AAACTCTTTGTGCTTATGTG+GGG - chr5.1:56262195-56262214 MS.gene35887:intron 35.0%
AAACTGAGAAATAAACAGCG+TGG + chr5.1:56260595-56260614 None:intergenic 35.0%
AAACTTTGTTCTTGCTTCTG+TGG + chr5.1:56260285-56260304 None:intergenic 35.0%
AAAGAAGAACCTTTGACTGA+TGG - chr5.1:56261741-56261760 MS.gene35887:intron 35.0%
AACTGAGAAATAAACAGCGT+GGG + chr5.1:56260594-56260613 None:intergenic 35.0%
AGAAAGAATCAAGTGGGAAA+AGG + chr5.1:56263035-56263054 None:intergenic 35.0%
AGTTACTAAACTGTGAGAAG+AGG - chr5.1:56261868-56261887 MS.gene35887:intron 35.0%
ATACGAATGTTTGGTATCCT+TGG - chr5.1:56264125-56264144 MS.gene35887:CDS 35.0%
ATAGTTGTAGAGTTATGGGT+TGG - chr5.1:56262310-56262329 MS.gene35887:intron 35.0%
ATTGTTGTCATAGCTATACC+TGG + chr5.1:56261042-56261061 None:intergenic 35.0%
ATTTCTCTCTCTCTCATAAC+TGG + chr5.1:56263585-56263604 None:intergenic 35.0%
CAAACTCTTTGTGCTTATGT+GGG - chr5.1:56262194-56262213 MS.gene35887:intron 35.0%
CATAATATATGTTGAGGGGA+TGG - chr5.1:56262643-56262662 MS.gene35887:intron 35.0%
CCAACAAAAAGAATGAGAGT+GGG - chr5.1:56263099-56263118 MS.gene35887:intron 35.0%
CTCGTTGTAATCTTGGAAAA+AGG + chr5.1:56264454-56264473 None:intergenic 35.0%
CTGTTCTCTTTCTCTGTTAT+TGG + chr5.1:56261449-56261468 None:intergenic 35.0%
CTTTCTCTGTTATTGGCATT+GGG + chr5.1:56261442-56261461 None:intergenic 35.0%
GAGAGAATCCAAACTTATCA+AGG - chr5.1:56263396-56263415 MS.gene35887:intron 35.0%
GTTACTAAACTGTGAGAAGA+GGG - chr5.1:56261869-56261888 MS.gene35887:intron 35.0%
GTTGGATAGTTGTAGAGTTA+TGG - chr5.1:56262305-56262324 MS.gene35887:intron 35.0%
TAAAACTCAATTGCAATGCC+AGG - chr5.1:56261021-56261040 MS.gene35887:intron 35.0%
TACGAATGTTTGGTATCCTT+GGG - chr5.1:56264126-56264145 MS.gene35887:CDS 35.0%
TACTGGCAATTCATGATTTC+TGG - chr5.1:56260377-56260396 MS.gene35887:CDS 35.0%
TAGAATCATTGTCAAACCCA+AGG + chr5.1:56264145-56264164 None:intergenic 35.0%
TAGTTAATAGCGCGATATAG+CGG + chr5.1:56262109-56262128 None:intergenic 35.0%
TAGTTGTAGAGTTATGGGTT+GGG - chr5.1:56262311-56262330 MS.gene35887:intron 35.0%
TCCAACAAAAAGAATGAGAG+TGG - chr5.1:56263098-56263117 MS.gene35887:intron 35.0%
TCCCCTAACTTTACTTTAGT+TGG + chr5.1:56263783-56263802 None:intergenic 35.0%
TCTTTCTCTGTTATTGGCAT+TGG + chr5.1:56261443-56261462 None:intergenic 35.0%
TGAAAAAGGACGGATACAAA+GGG - chr5.1:56264346-56264365 MS.gene35887:CDS 35.0%
TGAAAATGACAACCAAACCT+AGG + chr5.1:56262132-56262151 None:intergenic 35.0%
TGATAAGTTTGGATTCTCTC+CGG + chr5.1:56263396-56263415 None:intergenic 35.0%
TGATTTCACAAACTTAACGC+CGG - chr5.1:56260325-56260344 MS.gene35887:CDS 35.0%
TGTCAATTCCTATACAGTTC+TGG + chr5.1:56262884-56262903 None:intergenic 35.0%
TTCACATTTGAACACAGTAG+TGG - chr5.1:56261966-56261985 MS.gene35887:intron 35.0%
TTGTTGAAATGGTTAGGGAA+TGG - chr5.1:56262487-56262506 MS.gene35887:intron 35.0%
TTTGAGAATGTGAGTTCCAT+AGG - chr5.1:56262171-56262190 MS.gene35887:intron 35.0%
! AAACCGTTTCTAGGGAAATT+TGG + chr5.1:56261922-56261941 None:intergenic 35.0%
! AACCGTTTCTAGGGAAATTT+GGG + chr5.1:56261921-56261940 None:intergenic 35.0%
! AGTGATCATTTTGTTCATGC+TGG - chr5.1:56260653-56260672 MS.gene35887:intron 35.0%
! ATGTTTTCCTCCATCTTGTA+AGG + chr5.1:56262931-56262950 None:intergenic 35.0%
! CTCATTCTTTTTGTTGGAGA+GGG + chr5.1:56263096-56263115 None:intergenic 35.0%
! GTGATTTTATGCGACTGAAT+GGG - chr5.1:56262690-56262709 MS.gene35887:intron 35.0%
! GTGTGTTGTTGAAATGGTTA+GGG - chr5.1:56262482-56262501 MS.gene35887:intron 35.0%
! TAGTAGGGCTTTAATTGGTA+GGG - chr5.1:56262267-56262286 MS.gene35887:intron 35.0%
! TCTCATTCTTTTTGTTGGAG+AGG + chr5.1:56263097-56263116 None:intergenic 35.0%
! TGATTTTATGCGACTGAATG+GGG - chr5.1:56262691-56262710 MS.gene35887:intron 35.0%
! TGGTCCCTTAACTAATTTTG+TGG + chr5.1:56263845-56263864 None:intergenic 35.0%
! TGTGATTTTATGCGACTGAA+TGG - chr5.1:56262689-56262708 MS.gene35887:intron 35.0%
! TTAGTAGGGCTTTAATTGGT+AGG - chr5.1:56262266-56262285 MS.gene35887:intron 35.0%
! TTGTTGGTGTGTTGTTGAAA+TGG - chr5.1:56262476-56262495 MS.gene35887:intron 35.0%
!! ATGGTGTTGTTTGATTCATG+TGG - chr5.1:56263952-56263971 MS.gene35887:CDS 35.0%
!! GTGTTTTTGATTGTGTGAAG+AGG - chr5.1:56260771-56260790 MS.gene35887:intron 35.0%
!! TCATTTTGTTCATGCTGGTT+CGG - chr5.1:56260658-56260677 MS.gene35887:intron 35.0%
!! TCCTATACAGTTCTGGAATT+AGG + chr5.1:56262877-56262896 None:intergenic 35.0%
!!! AGAGAAGTTTTGTTGTGCAA+TGG - chr5.1:56261767-56261786 MS.gene35887:intron 35.0%
!!! TGTTTTAACAACATCGCCAA+TGG + chr5.1:56264322-56264341 None:intergenic 35.0%
!!! TTTTGGGTTTTGTTTTGCCA+TGG - chr5.1:56261821-56261840 MS.gene35887:intron 35.0%
AAAAGAATGAGAGTGGGAAG+AGG - chr5.1:56263105-56263124 MS.gene35887:intron 40.0%
AAACTGTGAGAAGAGGGAAA+AGG - chr5.1:56261875-56261894 MS.gene35887:intron 40.0%
AAAGAATGAGAGTGGGAAGA+GGG - chr5.1:56263106-56263125 MS.gene35887:intron 40.0%
AACTGTGAGAAGAGGGAAAA+GGG - chr5.1:56261876-56261895 MS.gene35887:intron 40.0%
AAGAATCAAGTGGGAAAAGG+TGG + chr5.1:56263032-56263051 None:intergenic 40.0%
AAGCACAAAGAGTTTGCCTA+TGG + chr5.1:56262190-56262209 None:intergenic 40.0%
ACTTATGAAGCTGCGAAAAG+AGG - chr5.1:56260884-56260903 MS.gene35887:intron 40.0%
AGGGGATGGCTAAAACTTAA+AGG - chr5.1:56262657-56262676 MS.gene35887:intron 40.0%
AGGTTCAAAAGTGGTTCCAT+TGG - chr5.1:56264303-56264322 MS.gene35887:CDS 40.0%
AGGTTGCAGTTGAGTAATAG+TGG - chr5.1:56260740-56260759 MS.gene35887:intron 40.0%
AGTCGCATAAAATCACACTC+AGG + chr5.1:56262686-56262705 None:intergenic 40.0%
ATATACCACATAAGCGCAGA+AGG + chr5.1:56261218-56261237 None:intergenic 40.0%
ATATGTAGACCAGCAGATAG+CGG + chr5.1:56264418-56264437 None:intergenic 40.0%
CAACATGAAGTTATGGTACC+GGG - chr5.1:56262738-56262757 MS.gene35887:intron 40.0%
CATTCACAAGTCACAAACAC+AGG + chr5.1:56261242-56261261 None:intergenic 40.0%
CCAACATGAAGTTATGGTAC+CGG - chr5.1:56262737-56262756 MS.gene35887:intron 40.0%
CGCTATTAACTACCTAGGTT+TGG - chr5.1:56262117-56262136 MS.gene35887:intron 40.0%
CGGTACCATAACTTCATGTT+GGG + chr5.1:56262739-56262758 None:intergenic 40.0%
CGGTCAATCTTAAAATCCGA+AGG - chr5.1:56260515-56260534 MS.gene35887:intron 40.0%
CTCCAACGAGAGAAAAGATA+GGG + chr5.1:56264234-56264253 None:intergenic 40.0%
CTCTGTTTCACCATATCCAT+CGG + chr5.1:56260722-56260741 None:intergenic 40.0%
CTTATGAAGCTGCGAAAAGA+GGG - chr5.1:56260885-56260904 MS.gene35887:intron 40.0%
CTTTCTGCTCGTTGTAATCT+TGG + chr5.1:56264461-56264480 None:intergenic 40.0%
GCAAACTCTTTGTGCTTATG+TGG - chr5.1:56262193-56262212 MS.gene35887:intron 40.0%
GCCTAATTCCAGAACTGTAT+AGG - chr5.1:56262873-56262892 MS.gene35887:intron 40.0%
GGATGGCTAAAACTTAAAGG+TGG - chr5.1:56262660-56262679 MS.gene35887:intron 40.0%
GGATGTGATAGGTTCAAAAG+TGG - chr5.1:56264294-56264313 MS.gene35887:CDS 40.0%
GGCGTTAAGTTTGTGAAATC+AGG + chr5.1:56260326-56260345 None:intergenic 40.0%
GGTACCATAACTTCATGTTG+GGG + chr5.1:56262738-56262757 None:intergenic 40.0%
GTGAAAAAGGACGGATACAA+AGG - chr5.1:56264345-56264364 MS.gene35887:CDS 40.0%
TACAACGAGCAGAAAGATTC+TGG - chr5.1:56264465-56264484 MS.gene35887:CDS 40.0%
TATCGCGCTATTAACTACCT+AGG - chr5.1:56262112-56262131 MS.gene35887:intron 40.0%
TATTGCGAACTTCTCTGCTA+TGG - chr5.1:56262048-56262067 MS.gene35887:intron 40.0%
TCCCCAAATTTCCCTAGAAA+CGG - chr5.1:56261916-56261935 MS.gene35887:intron 40.0%
TCTCCAACGAGAGAAAAGAT+AGG + chr5.1:56264235-56264254 None:intergenic 40.0%
TGAAATCAGGTCGGTAATCT+GGG + chr5.1:56260313-56260332 None:intergenic 40.0%
TGGGAAAAGGTGGTTTAATG+TGG + chr5.1:56263022-56263041 None:intergenic 40.0%
TGGTCTATGGTGTTTGATCA+AGG - chr5.1:56264031-56264050 MS.gene35887:CDS 40.0%
TTGATTGTTCATGCTACTGC+CGG - chr5.1:56260947-56260966 MS.gene35887:intron 40.0%
! ACCGTTTCTAGGGAAATTTG+GGG + chr5.1:56261920-56261939 None:intergenic 40.0%
! ATCCCTATCTTTTCTCTCGT+TGG - chr5.1:56264229-56264248 MS.gene35887:CDS 40.0%
! ATGATTTCTGGATCCATTGC+TGG - chr5.1:56260389-56260408 MS.gene35887:CDS 40.0%
! CCCACTCTCATTCTTTTTGT+TGG + chr5.1:56263102-56263121 None:intergenic 40.0%
! CTGACGGAAACGGATTTAAT+TGG + chr5.1:56260485-56260504 None:intergenic 40.0%
! CTGTGTTTGTGACTTGTGAA+TGG - chr5.1:56261240-56261259 MS.gene35887:intron 40.0%
! GGTGTGTTGTTGAAATGGTT+AGG - chr5.1:56262481-56262500 MS.gene35887:intron 40.0%
! TCTGGAATTAGGCAGTAACA+GGG + chr5.1:56262866-56262885 None:intergenic 40.0%
!! AGGGAAATGAGGAGTTGATA+TGG - chr5.1:56263137-56263156 MS.gene35887:intron 40.0%
!! GGCTTGCATGTGAGTTTTAA+CGG + chr5.1:56260450-56260469 None:intergenic 40.0%
!! GTGAGTTTTAACGGTGTCAA+CGG + chr5.1:56260441-56260460 None:intergenic 40.0%
!! TGAGTTTTAACGGTGTCAAC+GGG + chr5.1:56260440-56260459 None:intergenic 40.0%
!! TTCTGGAATTAGGCAGTAAC+AGG + chr5.1:56262867-56262886 None:intergenic 40.0%
!! TTGGGTGCTGTTATGATGAT+AGG - chr5.1:56262816-56262835 MS.gene35887:intron 40.0%
!!! AAGTTTTGTTGTGCAATGGC+TGG - chr5.1:56261771-56261790 MS.gene35887:intron 40.0%
!!! AGTTTTGTTGTGCAATGGCT+GGG - chr5.1:56261772-56261791 MS.gene35887:intron 40.0%
!!! CATTTTGTTCATGCTGGTTC+GGG - chr5.1:56260659-56260678 MS.gene35887:intron 40.0%
!!! GGATTTTTTGACAACTGCGA+TGG - chr5.1:56263260-56263279 MS.gene35887:intron 40.0%
AAGAGCTTGACTGACGGAAA+CGG + chr5.1:56260495-56260514 None:intergenic 45.0%
AGTGTTTACGCCGATGGATA+TGG - chr5.1:56260709-56260728 MS.gene35887:intron 45.0%
ATGGCCCACGACAAGAATAT+GGG + chr5.1:56263365-56263384 None:intergenic 45.0%
ATTGCAGACTGCAGAGAGTT+TGG - chr5.1:56262797-56262816 MS.gene35887:intron 45.0%
CAGTACTCCTTACAAGATGG+AGG - chr5.1:56262921-56262940 MS.gene35887:intron 45.0%
CCGGTACCATAACTTCATGT+TGG + chr5.1:56262740-56262759 None:intergenic 45.0%
CGATGGATATGGTGAAACAG+AGG - chr5.1:56260720-56260739 MS.gene35887:intron 45.0%
CTAGGGAAATTTGGGGATCT+AGG + chr5.1:56261913-56261932 None:intergenic 45.0%
CTCTCATCATCAACACTCTC+TGG + chr5.1:56260926-56260945 None:intergenic 45.0%
CTGGAATTAGGCAGTAACAG+GGG + chr5.1:56262865-56262884 None:intergenic 45.0%
GAGAAGAGGGAAAAGGGTTA+GGG - chr5.1:56261882-56261901 MS.gene35887:intron 45.0%
GAGCAGTACTCCTTACAAGA+TGG - chr5.1:56262918-56262937 MS.gene35887:intron 45.0%
GATATAGCGGCATATCGAAG+CGG + chr5.1:56262096-56262115 None:intergenic 45.0%
GCGAAATGCACAGCAGTAAA+AGG + chr5.1:56260863-56260882 None:intergenic 45.0%
GGATTTGTGCATTCTGCACT+TGG + chr5.1:56262844-56262863 None:intergenic 45.0%
GTGAAATCAGGTCGGTAATC+TGG + chr5.1:56260314-56260333 None:intergenic 45.0%
GTGTTCGATACAACCAGCAA+TGG + chr5.1:56260405-56260424 None:intergenic 45.0%
TGAGAAGAGGGAAAAGGGTT+AGG - chr5.1:56261881-56261900 MS.gene35887:intron 45.0%
TGATTGTTCATGCTACTGCC+GGG - chr5.1:56260948-56260967 MS.gene35887:intron 45.0%
TTCCCCCATATTCTTGTCGT+GGG - chr5.1:56263358-56263377 MS.gene35887:intron 45.0%
TTCTCTCAGCCATCAGTCAA+AGG + chr5.1:56261753-56261772 None:intergenic 45.0%
TTGCAGACTGCAGAGAGTTT+GGG - chr5.1:56262798-56262817 MS.gene35887:intron 45.0%
TTTCCGTCAGTCAAGCTCTT+CGG - chr5.1:56260495-56260514 MS.gene35887:intron 45.0%
! TGCTGGTCTACATATGAAGC+TGG - chr5.1:56264423-56264442 MS.gene35887:CDS 45.0%
! TGCTGGTTGTATCGAACACA+TGG - chr5.1:56260406-56260425 MS.gene35887:CDS 45.0%
!! CAGAGAGTGTTGATGATGAG+AGG - chr5.1:56260924-56260943 MS.gene35887:intron 45.0%
!! CTGTTTGTGCAGCGGATTTT+TGG - chr5.1:56263333-56263352 MS.gene35887:intron 45.0%
!! GAGCGCGAAGTGTTGTTAAA+TGG - chr5.1:56263207-56263226 MS.gene35887:intron 45.0%
!! GATTCTGGAACTGTCACCTA+AGG - chr5.1:56264480-56264499 MS.gene35887:CDS 45.0%
!! GTTTTGAGTGAGGAAGGGTT+TGG - chr5.1:56260794-56260813 MS.gene35887:intron 45.0%
!! TAAATGGTGTTGCACCCCTA+TGG - chr5.1:56263223-56263242 MS.gene35887:intron 45.0%
!!! AAGAGGGTTTTGAGTGAGGA+AGG - chr5.1:56260788-56260807 MS.gene35887:intron 45.0%
!!! AGAGGGTTTTGAGTGAGGAA+GGG - chr5.1:56260789-56260808 MS.gene35887:intron 45.0%
!!! GGTTTTGTTTTGCCATGGCT+GGG - chr5.1:56261826-56261845 MS.gene35887:intron 45.0%
!!! TGTGAAGAGGGTTTTGAGTG+AGG - chr5.1:56260784-56260803 MS.gene35887:intron 45.0%
AAACAGAACACTGCGGCCTA+TGG + chr5.1:56263319-56263338 None:intergenic 50.0%
ACCACAGCATTCTGCCATAG+GGG + chr5.1:56263240-56263259 None:intergenic 50.0%
ACCTTGAAGCAGCACAAACC+CGG + chr5.1:56262759-56262778 None:intergenic 50.0%
AGGGTGTGTGTGGATGTGAT+AGG - chr5.1:56264283-56264302 MS.gene35887:CDS 50.0%
ATACCGCGGTATAAGGCAGA+CGG + chr5.1:56260542-56260561 None:intergenic 50.0%
ATCTGCTCCTTCTCGGTCAA+GGG + chr5.1:56262981-56263000 None:intergenic 50.0%
CACCACAGCATTCTGCCATA+GGG + chr5.1:56263241-56263260 None:intergenic 50.0%
CACGACAAGAATATGGGGGA+AGG + chr5.1:56263359-56263378 None:intergenic 50.0%
CTCTGCTATGGCCATTACCA+GGG - chr5.1:56262060-56262079 MS.gene35887:intron 50.0%
CTTCCCCCATATTCTTGTCG+TGG - chr5.1:56263357-56263376 MS.gene35887:intron 50.0%
GAGAAATAAACAGCGTGGGC+CGG + chr5.1:56260590-56260609 None:intergenic 50.0%
GAGAGGGATGCATGTATGAG+AGG + chr5.1:56263080-56263099 None:intergenic 50.0%
GATACAAAGGGCTCATGCGA+GGG - chr5.1:56264358-56264377 MS.gene35887:CDS 50.0%
GATGGCCCACGACAAGAATA+TGG + chr5.1:56263366-56263385 None:intergenic 50.0%
GATTGTTCATGCTACTGCCG+GGG - chr5.1:56260949-56260968 MS.gene35887:intron 50.0%
GCAGTGTTCTGTTTGTGCAG+CGG - chr5.1:56263325-56263344 MS.gene35887:intron 50.0%
GCTGCACAAACAGAACACTG+CGG + chr5.1:56263326-56263345 None:intergenic 50.0%
GGCTGGGAGTGAAAAGACAA+TGG - chr5.1:56261842-56261861 MS.gene35887:intron 50.0%
GGGAGAAGATGAGGGAAATG+AGG - chr5.1:56263126-56263145 MS.gene35887:intron 50.0%
GGGGATCAAAACACAGCCTT+AGG - chr5.1:56262710-56262729 MS.gene35887:intron 50.0%
GGTGCCCCAACATGAAGTTA+TGG - chr5.1:56262731-56262750 MS.gene35887:intron 50.0%
TATTCCACCCTTGACCGAGA+AGG - chr5.1:56262971-56262990 MS.gene35887:intron 50.0%
TCTCTGCTATGGCCATTACC+AGG - chr5.1:56262059-56262078 MS.gene35887:intron 50.0%
TCTGCCTTATACCGCGGTAT+CGG - chr5.1:56260542-56260561 MS.gene35887:intron 50.0%
TGACCGAAGAGCTTGACTGA+CGG + chr5.1:56260501-56260520 None:intergenic 50.0%
TGGCCCACGACAAGAATATG+GGG + chr5.1:56263364-56263383 None:intergenic 50.0%
TGGGAAGAGGGAGAAGATGA+GGG - chr5.1:56263118-56263137 MS.gene35887:intron 50.0%
TTCGCAATAGCAGCTGCTCA+AGG + chr5.1:56262037-56262056 None:intergenic 50.0%
! ACTTCATGTTGGGGCACCTA+AGG + chr5.1:56262729-56262748 None:intergenic 50.0%
! TGAAGACCGTCGTGAGTTGA+CGG + chr5.1:56260356-56260375 None:intergenic 50.0%
! TGTCTTTTCACTCCCAGCCA+TGG + chr5.1:56261841-56261860 None:intergenic 50.0%
!! ATTCTCTCCGGTGTTGTCGA+TGG + chr5.1:56263384-56263403 None:intergenic 50.0%
!! GGAGCATGAAAGAGCATCCT+TGG + chr5.1:56264390-56264409 None:intergenic 50.0%
!!! GGCTGGGAGAAGTTTTGTTG+TGG - chr5.1:56261788-56261807 MS.gene35887:intron 50.0%
!!! GGGTTTTGTTTTGCCATGGC+TGG - chr5.1:56261825-56261844 MS.gene35887:intron 50.0%
ACCCCTATGGCAGAATGCTG+TGG - chr5.1:56263236-56263255 MS.gene35887:intron 55.0%
AGCACGGATCTGCTCCTTCT+CGG + chr5.1:56262988-56263007 None:intergenic 55.0%
CCACCACAGCATTCTGCCAT+AGG + chr5.1:56263242-56263261 None:intergenic 55.0%
CCTATGGCAGAATGCTGTGG+TGG - chr5.1:56263239-56263258 MS.gene35887:intron 55.0%
CTCACGACGGTCTTCACTAC+TGG - chr5.1:56260360-56260379 MS.gene35887:CDS 55.0%
GATCTGCTCCTTCTCGGTCA+AGG + chr5.1:56262982-56263001 None:intergenic 55.0%
GCACACTGTCGTGACAAACG+TGG + chr5.1:56262224-56262243 None:intergenic 55.0%
GGATACAAAGGGCTCATGCG+AGG - chr5.1:56264357-56264376 MS.gene35887:CDS 55.0%
GGCCCACGACAAGAATATGG+GGG + chr5.1:56263363-56263382 None:intergenic 55.0%
GGTGGTTTAATGTGGCAGCG+AGG + chr5.1:56263014-56263033 None:intergenic 55.0%
GTATAAGGCAGACGGGCCTT+CGG + chr5.1:56260534-56260553 None:intergenic 55.0%
GTGGGAAGAGGGAGAAGATG+AGG - chr5.1:56263117-56263136 MS.gene35887:intron 55.0%
TACCGCGGTATAAGGCAGAC+GGG + chr5.1:56260541-56260560 None:intergenic 55.0%
TGACGCAGTGTTTACGCCGA+TGG - chr5.1:56260703-56260722 MS.gene35887:intron 55.0%
TGCTATGGCCATTACCAGGG+CGG - chr5.1:56262063-56262082 MS.gene35887:intron 55.0%
TTGGGCCTTCTGCGCTTATG+TGG - chr5.1:56261210-56261229 MS.gene35887:intron 55.0%
! AAGGTGCTATAGCGCCTCCT+GGG + chr5.1:56262018-56262037 None:intergenic 55.0%
! TGGTTCGGGTGTTTGTGCGA+CGG - chr5.1:56260673-56260692 MS.gene35887:intron 55.0%
!! ACCGGGTTTGTGCTGCTTCA+AGG - chr5.1:56262755-56262774 MS.gene35887:intron 55.0%
!! CTGGGTAGCGGACAGGTTAA+CGG + chr5.1:56262000-56262019 None:intergenic 55.0%
ACAAAGGGCTCATGCGAGGG+TGG - chr5.1:56264361-56264380 MS.gene35887:CDS 60.0%
ATAAACAGCGTGGGCCGGAC+CGG + chr5.1:56260585-56260604 None:intergenic 60.0%
CAAAGGGCTCATGCGAGGGT+GGG - chr5.1:56264362-56264381 MS.gene35887:CDS 60.0%
CGGCATATCGAAGCGGACGT+TGG + chr5.1:56262089-56262108 None:intergenic 60.0%
CGTTAACCTGTCCGCTACCC+AGG - chr5.1:56261998-56262017 MS.gene35887:intron 60.0%
CTATAGCGCCTCCTGGGTAG+CGG + chr5.1:56262012-56262031 None:intergenic 60.0%
GCCTGCCATTGCAGCACCAT+AGG - chr5.1:56263300-56263319 MS.gene35887:intron 60.0%
TAACCTGTCCGCTACCCAGG+AGG - chr5.1:56262001-56262020 MS.gene35887:intron 60.0%
TCGTGGGCCATCGACAACAC+CGG - chr5.1:56263374-56263393 MS.gene35887:intron 60.0%
TGCTCCTTCTCGGTCAAGGG+TGG + chr5.1:56262978-56262997 None:intergenic 60.0%
TGTGGCAGCGAGGTTGAGCA+CGG + chr5.1:56263004-56263023 None:intergenic 60.0%
TGTTCATGCTACTGCCGGGG+CGG - chr5.1:56260952-56260971 MS.gene35887:intron 60.0%
TTCGGGTGTTTGTGCGACGG+TGG - chr5.1:56260676-56260695 MS.gene35887:intron 60.0%
! AGACCAGCAGATAGCGGCTG+CGG + chr5.1:56264412-56264431 None:intergenic 60.0%
! AGACCGTCGTGAGTTGACGG+CGG + chr5.1:56260353-56260372 None:intergenic 60.0%
! CAAGGTGCTATAGCGCCTCC+TGG + chr5.1:56262019-56262038 None:intergenic 60.0%
! TCATGCGAGGGTGGGTTCCA+AGG - chr5.1:56264370-56264389 MS.gene35887:CDS 60.0%
! TGCGCCGATACCGCGGTATA+AGG + chr5.1:56260549-56260568 None:intergenic 60.0%
!! ATACCGCGGTATCGGCGCAA+TGG - chr5.1:56260550-56260569 MS.gene35887:intron 60.0%
!! GCCTATGGTGCTGCAATGGC+AGG + chr5.1:56263304-56263323 None:intergenic 60.0%
!! TACCGCGGTATCGGCGCAAT+GGG - chr5.1:56260551-56260570 MS.gene35887:intron 60.0%
!! TGCGGCCTATGGTGCTGCAA+TGG + chr5.1:56263308-56263327 None:intergenic 60.0%
GACGTTGGCCGCCCTGGTAA+TGG + chr5.1:56262074-56262093 None:intergenic 65.0%
GGCCCGTCTGCCTTATACCG+CGG - chr5.1:56260536-56260555 MS.gene35887:intron 65.0%
! GACCAGCAGATAGCGGCTGC+GGG + chr5.1:56264411-56264430 None:intergenic 65.0%
!! GGTATCGGCGCAATGGGCCT+TGG - chr5.1:56260557-56260576 MS.gene35887:intron 65.0%
CTCCCGCAGCCGCTATCTGC+TGG - chr5.1:56264406-56264425 MS.gene35887:CDS 70.0%
GCGCCGCCGTCAACTCACGA+CGG - chr5.1:56260347-56260366 MS.gene35887:CDS 70.0%
! GGCCCATTGCGCCGATACCG+CGG + chr5.1:56260556-56260575 None:intergenic 70.0%
! TCGTGAGTTGACGGCGGCGC+CGG + chr5.1:56260347-56260366 None:intergenic 70.0%
!! AATGGGCCTTGGCGCCGGTC+CGG - chr5.1:56260568-56260587 MS.gene35887:intron 70.0%
CAACCCACCAGCAGCCGCCC+CGG + chr5.1:56260969-56260988 None:intergenic 75.0%
GAAGCGGACGTTGGCCGCCC+TGG + chr5.1:56262080-56262099 None:intergenic 75.0%
GGCGCAATGGGCCTTGGCGC+CGG - chr5.1:56260563-56260582 MS.gene35887:intron 75.0%
!! GCGCCTCCTGGGTAGCGGAC+AGG + chr5.1:56262007-56262026 None:intergenic 75.0%
! ACTGCCGGGGCGGCTGCTGG+TGG - chr5.1:56260962-56260981 MS.gene35887:intron 80.0%
! CTGCCGGGGCGGCTGCTGGT+GGG - chr5.1:56260963-56260982 MS.gene35887:intron 80.0%
! GCTACTGCCGGGGCGGCTGC+TGG - chr5.1:56260959-56260978 MS.gene35887:intron 80.0%
!! CGGGGCGGCTGCTGGTGGGT+TGG - chr5.1:56260967-56260986 MS.gene35887:intron 80.0%
! CGTGGGCCGGACCGGCGCCA+AGG + chr5.1:56260577-56260596 None:intergenic 85.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 56260278 56264500 56260278 ID=MS.gene35887
chr5.1 mRNA 56260278 56264500 56260278 ID=MS.gene35887.t1;Parent=MS.gene35887
chr5.1 exon 56263736 56264500 56263736 ID=MS.gene35887.t1.exon1;Parent=MS.gene35887.t1
chr5.1 CDS 56263736 56264500 56263736 ID=cds.MS.gene35887.t1;Parent=MS.gene35887.t1
chr5.1 exon 56260278 56260493 56260278 ID=MS.gene35887.t1.exon2;Parent=MS.gene35887.t1
chr5.1 CDS 56260278 56260493 56260278 ID=cds.MS.gene35887.t1;Parent=MS.gene35887.t1
Gene Sequence

>MS.gene35887

ATGGCCACAGAAGCAAGAACAAAGTTTCAAAACCCAGATTACCGACCTGATTTCACAAACTTAACGCCGGCGCCGCCGTCAACTCACGACGGTCTTCACTACTGGCAATTCATGATTTCTGGATCCATTGCTGGTTGTATCGAACACATGGCAATGTTTCCCGTTGACACCGTTAAAACTCACATGCAAGCCATCACATCTTGTCCAATTAAATCCGTTTCCGTCAGTCAAGCTCTTCGGTCAATCTTAAAATCCGAAGGCCCGTCTGCCTTATACCGCGGTATCGGCGCAATGGGCCTTGGCGCCGGTCCGGCCCACGCTGTTTATTTCTCAGTTTATGAAACCCTTAAAAAGAAATTCTCACATGGAAATGTTAGTGATCATTTTGTTCATGCTGGTTCGGGTGTTTGTGCGACGGTGGCGAGTGACGCAGTGTTTACGCCGATGGATATGGTGAAACAGAGGTTGCAGTTGAGTAATAGTGGTTATAAGGGTGTTTTTGATTGTGTGAAGAGGGTTTTGAGTGAGGAAGGGTTTGGTGCTTTTTATGCTAGTTATAGGACTACTGTTTTGATGAATGCGCCTTTTACTGCTGTGCATTTCGCGACTTATGAAGCTGCGAAAAGAGGGTTGAATGAGATTTCTCCAGAGAGTGTTGATGATGAGAGGTTGATTGTTCATGCTACTGCCGGGGCGGCTGCTGGTGGGTTGGCTGCTGCTGTTACTACGCCGCTTGATGTTGTTAAAACTCAATTGCAATGCCAGGTATAGCTATGACAACAATAGTAGTAATGATAATTTGTTGATTTTGAATTATAGCTATGATAATAATAGTAGTAACGATAATTTGTTGATTTTGAATTGCTTAGCTATAGTACTTGCCTTTAAAGTTTAGCATATGAAGAAATTAACTATGTGCTCTTTTAATGAATTTGGGCCTTCTGCGCTTATGTGGTATATTCCTGTGTTTGTGACTTGTGAATGGAACAATGCTGTTAAATAGCCCCTATAGTGTAGTGTAATTTGAACAATTTGCTAGTCCTATGATATACTATTTAGTCCAAAATATTGTCAAATAGCAACTCTAGCATTAAACATTTATAAATCAAAACTCAAGCCTTAATCAAAGCAGATGTCTTAATCAAAACATTACATTCTATTCCCAATGCCAATAACAGAGAAAGAGAACAGAACAGAGATGACAAATGAAAGAAAATGAAAACAGAATACAAAGAAAGAAAGAGAGATAACGTACAACAAAACAGAGTTGAGAGATGAAAGAAAACATAACAGAACAAAGAAAGAACGCGTAAAAGAGAACATAGAACTGAAAGAAATAACACAAAAGAGAACATAACATAGCCCTAAAAATAACCTAAAAGAAATAAAGAAAAGAACATGTATTACTGAAAGAAAGAAAACGCAAAACAGAACATAAAGAGAAGAGAAATGAGAGAGCGTAGAAAGAAGAACCTTTGACTGATGGCTGAGAGAAGTTTTGTTGTGCAATGGCTGGGAGAAGTTTTGTTGTGGAATGAAATTTTTTTGGGTTTTGTTTTGCCATGGCTGGGAGTGAAAAGACAATGGAACAGTTACTAAACTGTGAGAAGAGGGAAAAGGGTTAGGGATAATCCTAGATCCCCAAATTTCCCTAGAAACGGTTTAAAATTTAGGGTCTATTTGATGTTTTCACATTTGAACACAGTAGTGGATCAGAGACCGTTAACCTGTCCGCTACCCAGGAGGCGCTATAGCACCTTGAGCAGCTGCTATTGCGAACTTCTCTGCTATGGCCATTACCAGGGCGGCCAACGTCCGCTTCGATATGCCGCTATATCGCGCTATTAACTACCTAGGTTTGGTTGTCATTTTCATTGATTATCAAGCTTCTGTTTTGAGAATGTGAGTTCCATAGGCAAACTCTTTGTGCTTATGTGGGGATTCCACGTTTGTCACGACAGTGTGCGAAAAACGTGAAGCAAATGATATTAGTAGGGCTTTAATTGGTAGGGTATTACAAATATAAGGTTGGATAGTTGTAGAGTTATGGGTTGGGTAGTTCAAGTCAAACTATTACGAGAGATTTGGAGTTAAATAGTTTTTTATATTTACATATGATTCATTATAAGATGTTATGGTGTTGTTAGATTTGATCTATGTAGTTGACCATCCTAAGTTGAAAAAGATTTTTGTTATTCTTGTTGGTGTGTTGTTGAAATGGTTAGGGAATGGTTTTGAAAAATTAGGGGGAACAATTTTCTCTTAAGTAGTTTTATTGTAATTTTGTTGTTTGAACCAATGGTGTCAATTTTATATGTAGCTATTCCCTATCTATTTTATAGGGCTTTTTTGTTAAATTGGAATTCATAATATATGTTGAGGGGATGGCTAAAACTTAAAGGTGGCCTGAGTGTGATTTTATGCGACTGAATGGGGATCAAAACACAGCCTTAGGTGCCCCAACATGAAGTTATGGTACCGGGTTTGTGCTGCTTCAAGGTGCAGATATGTTAGATAAGATTGCAGACTGCAGAGAGTTTGGGTGCTGTTATGATGATAGGAACCAAGTGCAGAATGCACAAATCCCCTGTTACTGCCTAATTCCAGAACTGTATAGGAATTGACATAATAATGAAGCTGGAGCAGTACTCCTTACAAGATGGAGGAAAACATATAATGCCTAAGAAAAAATATATTCCACCCTTGACCGAGAAGGAGCAGATCCGTGCTCAACCTCGCTGCCACATTAAACCACCTTTTCCCACTTGATTCTTTCTTATCTCATACAAGAAGTTGGATCCTCTCATACATGCATCCCTCTCCAACAAAAAGAATGAGAGTGGGAAGAGGGAGAAGATGAGGGAAATGAGGAGTTGATATGGTGAGAGAGAAATGAAATGTTGTGCAGTGATGTAGAAATTTTTTGTGAGAGCGCGAAGTGTTGTTAAATGGTGTTGCACCCCTATGGCAGAATGCTGTGGTGGATTTTTTGACAACTGCGATGGTCAGTTTGTGAAATGATGCCTGCCATTGCAGCACCATAGGCCGCAGTGTTCTGTTTGTGCAGCGGATTTTTGGCCTTCCCCCATATTCTTGTCGTGGGCCATCGACAACACCGGAGAGAATCCAAACTTATCAAGGAAAATGCATGGTATATTGTACACACACATGCACACATCAGTTAAATATCCTATCAAAAATCGTAAAACTTTATCGTTGAAAATAATAATTGATTGCTAATAAGTAACACCTTTCAGTACTAGTTTAGATAGAAGCATGATATGTCACATATATGATATATATGCCAGTTATGAGAGAGAGAGAAATAAATACAGGGTGATATTATATAATGAACTACAAATTGTTTACTACTCAAATAGGATAATTAACAGACTAGTTGTGAGTAGCATATTATTTATTTTTCAGTACTATTTACAGGCATGAAATTTTACATATATGTATGCCATTGGTTAACAGAATTGTTGATTTTTGTCGGAAATGACCAACTAAAGTAAAGTTAGGGGACCAAAACAGAACAAAGAATAATTATGCAACTGAGTGAAACCACAAAATTAGTTAAGGGACCAAATGTGTAATTTAACCTAATATTTTCTGATCAAACGAAAAGGTTTTAAATCTGATTAGGATTATTTGTTATTTTTTGTTGGAGCATTATGGTGTTGTTTGATTCATGTGGTTACTAGTCACTCCACTGTCTGAAAATAATTGTTACTGTTGTCATATTGTTTGATATGGTCTATGGTGTTTGATCAAGGTGTTATTTTATTTTATTTTTTGACTCAAGATGTTATTTTATTTGGAACTTGATTGTTCTGCAACTTTTATTATACGAATGTTTGGTATCCTTGGGTTTGACAATGATTCTAAATCTTTTTTAAAAATATTAAAGAATGATTGTAAATGAAGGGGAATTAGACAACAACTTTTTTAATCCCTATCTTTTCTCTCGTTGGAGAATTGATCTTAACATTGGATTCATGGTGCAGGGTGTGTGTGGATGTGATAGGTTCAAAAGTGGTTCCATTGGCGATGTTGTTAAAACAATAGTGAAAAAGGACGGATACAAAGGGCTCATGCGAGGGTGGGTTCCAAGGATGCTCTTTCATGCTCCCGCAGCCGCTATCTGCTGGTCTACATATGAAGCTGGAAAATCCTTTTTCCAAGATTACAACGAGCAGAAAGATTCTGGAACTGTCACCTAA

Protein sequence

>MS.gene35887.t1

MATEARTKFQNPDYRPDFTNLTPAPPSTHDGLHYWQFMISGSIAGCIEHMAMFPVDTVKTHMQAITSCPIKSVSVSQALRSILKSEGPSALYRGIGAMGLGAGPAHAVYFSVYETLKKKFSHGNVSDHFVHAGSGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVFDCVKRVLSEEGFGAFYASYRTTVLMNAPFTAVHFATYEAAKRGLNEISPESVDDERLIVHATAGAAAGGLAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVVKTIVKKDGYKGLMRGWVPRMLFHAPAAAICWSTYEAGKSFFQDYNEQKDSGTVT