Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35887.t1 | XP_003615848.2 | 97.9 | 327 | 6 | 1 | 1 | 326 | 1 | 327 | 1.70E-183 | 651.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35887.t1 | Q55DY8 | 43.0 | 291 | 151 | 6 | 30 | 307 | 12 | 300 | 1.3e-57 | 224.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35887.t1 | G7JZN0 | 97.9 | 327 | 6 | 1 | 1 | 326 | 1 | 327 | 1.3e-183 | 651.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056973 | MS.gene35887 | 0.804918 | 1.72E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene009772 | MS.gene35887 | PPI |
MS.gene80657 | MS.gene35887 | PPI |
MS.gene62620 | MS.gene35887 | PPI |
MS.gene56682 | MS.gene35887 | PPI |
MS.gene32803 | MS.gene35887 | PPI |
MS.gene53169 | MS.gene35887 | PPI |
MS.gene37414 | MS.gene35887 | PPI |
MS.gene29604 | MS.gene35887 | PPI |
MS.gene070056 | MS.gene35887 | PPI |
MS.gene99693 | MS.gene35887 | PPI |
MS.gene015005 | MS.gene35887 | PPI |
MS.gene041982 | MS.gene35887 | PPI |
MS.gene040151 | MS.gene35887 | PPI |
MS.gene50236 | MS.gene35887 | PPI |
MS.gene95889 | MS.gene35887 | PPI |
MS.gene93783 | MS.gene35887 | PPI |
MS.gene55382 | MS.gene35887 | PPI |
MS.gene066511 | MS.gene35887 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35887.t1 | MTR_5g073040 | 97.859 | 327 | 6 | 1 | 1 | 326 | 1 | 327 | 0.0 | 667 |
MS.gene35887.t1 | MTR_8g092080 | 31.348 | 319 | 189 | 10 | 2 | 315 | 14 | 307 | 1.17e-38 | 139 |
MS.gene35887.t1 | MTR_8g092080 | 30.208 | 192 | 123 | 4 | 30 | 216 | 125 | 310 | 6.49e-17 | 80.5 |
MS.gene35887.t1 | MTR_1g097890 | 31.959 | 291 | 170 | 8 | 35 | 322 | 48 | 313 | 1.22e-37 | 137 |
MS.gene35887.t1 | MTR_8g098240 | 32.609 | 276 | 174 | 6 | 40 | 313 | 322 | 587 | 2.57e-35 | 135 |
MS.gene35887.t1 | MTR_8g098240 | 26.131 | 199 | 135 | 3 | 112 | 310 | 302 | 488 | 1.02e-12 | 69.3 |
MS.gene35887.t1 | MTR_6g015860 | 28.621 | 290 | 181 | 6 | 24 | 293 | 3 | 286 | 1.16e-34 | 129 |
MS.gene35887.t1 | MTR_6g015860 | 22.727 | 176 | 129 | 4 | 148 | 318 | 33 | 206 | 1.95e-11 | 64.3 |
MS.gene35887.t1 | MTR_3g025800 | 29.254 | 335 | 196 | 7 | 23 | 323 | 11 | 338 | 2.24e-34 | 129 |
MS.gene35887.t1 | MTR_7g015870 | 31.071 | 280 | 163 | 8 | 50 | 307 | 37 | 308 | 6.34e-34 | 127 |
MS.gene35887.t1 | MTR_7g015870 | 26.396 | 197 | 134 | 6 | 128 | 319 | 25 | 215 | 5.66e-15 | 74.7 |
MS.gene35887.t1 | MTR_7g015870 | 31.071 | 280 | 163 | 8 | 50 | 307 | 33 | 304 | 1.11e-33 | 126 |
MS.gene35887.t1 | MTR_7g015870 | 25.381 | 197 | 136 | 5 | 128 | 319 | 21 | 211 | 8.26e-15 | 74.3 |
MS.gene35887.t1 | MTR_5g009500 | 27.937 | 315 | 202 | 6 | 24 | 313 | 24 | 338 | 1.20e-32 | 124 |
MS.gene35887.t1 | MTR_1g012030 | 28.070 | 285 | 183 | 7 | 38 | 313 | 139 | 410 | 1.09e-31 | 123 |
MS.gene35887.t1 | MTR_3g107510 | 27.336 | 289 | 194 | 7 | 38 | 320 | 122 | 400 | 1.14e-31 | 122 |
MS.gene35887.t1 | MTR_3g107510 | 26.108 | 203 | 131 | 7 | 20 | 211 | 199 | 393 | 6.91e-12 | 66.2 |
MS.gene35887.t1 | MTR_6g034515 | 29.391 | 279 | 185 | 6 | 49 | 321 | 78 | 350 | 2.18e-30 | 118 |
MS.gene35887.t1 | MTR_2g032610 | 31.023 | 303 | 174 | 11 | 30 | 307 | 21 | 313 | 2.03e-29 | 115 |
MS.gene35887.t1 | MTR_8g027975 | 27.723 | 303 | 192 | 6 | 38 | 313 | 51 | 353 | 2.11e-28 | 113 |
MS.gene35887.t1 | MTR_8g027975 | 24.510 | 204 | 142 | 5 | 117 | 313 | 39 | 237 | 5.98e-14 | 72.0 |
MS.gene35887.t1 | MTR_4g114320 | 27.273 | 286 | 193 | 8 | 38 | 318 | 123 | 398 | 9.52e-27 | 109 |
MS.gene35887.t1 | MTR_7g109135 | 29.965 | 287 | 184 | 9 | 40 | 313 | 24 | 306 | 3.58e-26 | 106 |
MS.gene35887.t1 | MTR_3g098460 | 28.155 | 309 | 198 | 10 | 14 | 310 | 181 | 477 | 2.12e-25 | 106 |
MS.gene35887.t1 | MTR_3g098460 | 29.348 | 184 | 120 | 4 | 38 | 212 | 299 | 481 | 1.30e-19 | 89.7 |
MS.gene35887.t1 | MTR_3g098460 | 25.758 | 198 | 133 | 5 | 122 | 316 | 198 | 384 | 1.27e-12 | 68.6 |
MS.gene35887.t1 | MTR_8g019480 | 27.653 | 311 | 173 | 7 | 52 | 318 | 47 | 349 | 3.62e-25 | 103 |
MS.gene35887.t1 | MTR_8g019480 | 29.688 | 192 | 106 | 6 | 134 | 310 | 41 | 218 | 1.72e-12 | 67.8 |
MS.gene35887.t1 | MTR_7g084400 | 25.974 | 308 | 199 | 7 | 17 | 311 | 192 | 483 | 4.15e-25 | 105 |
MS.gene35887.t1 | MTR_7g084400 | 29.050 | 179 | 122 | 2 | 38 | 212 | 309 | 486 | 2.81e-19 | 88.6 |
MS.gene35887.t1 | MTR_7g084400 | 29.255 | 188 | 128 | 3 | 134 | 320 | 215 | 398 | 1.29e-11 | 65.5 |
MS.gene35887.t1 | MTR_8g096050 | 28.428 | 299 | 190 | 10 | 25 | 311 | 214 | 500 | 9.06e-25 | 104 |
MS.gene35887.t1 | MTR_8g096050 | 28.962 | 183 | 122 | 2 | 38 | 212 | 321 | 503 | 1.30e-20 | 92.8 |
MS.gene35887.t1 | MTR_4g119770 | 25.938 | 320 | 189 | 8 | 40 | 317 | 16 | 329 | 3.23e-24 | 101 |
MS.gene35887.t1 | MTR_4g119770 | 23.113 | 212 | 138 | 4 | 28 | 215 | 119 | 329 | 7.15e-12 | 65.9 |
MS.gene35887.t1 | MTR_2g436930 | 26.899 | 316 | 185 | 8 | 40 | 315 | 17 | 326 | 1.64e-23 | 99.0 |
MS.gene35887.t1 | MTR_2g436930 | 25.238 | 210 | 132 | 4 | 29 | 214 | 119 | 327 | 1.47e-12 | 67.8 |
MS.gene35887.t1 | MTR_2g436930 | 25.701 | 214 | 136 | 5 | 129 | 324 | 12 | 220 | 2.75e-12 | 67.0 |
MS.gene35887.t1 | MTR_7g109135 | 28.214 | 280 | 191 | 6 | 40 | 313 | 24 | 299 | 2.52e-23 | 98.2 |
MS.gene35887.t1 | MTR_7g064980 | 26.000 | 300 | 200 | 5 | 38 | 319 | 25 | 320 | 2.76e-23 | 98.2 |
MS.gene35887.t1 | MTR_1g095780 | 28.028 | 289 | 178 | 8 | 39 | 320 | 526 | 791 | 5.86e-23 | 100 |
MS.gene35887.t1 | MTR_4g057850 | 28.975 | 283 | 171 | 10 | 39 | 303 | 23 | 293 | 1.27e-22 | 96.3 |
MS.gene35887.t1 | MTR_1g087840 | 27.737 | 274 | 179 | 6 | 54 | 313 | 35 | 303 | 3.37e-22 | 95.1 |
MS.gene35887.t1 | MTR_1g087840 | 28.889 | 180 | 112 | 6 | 50 | 216 | 132 | 308 | 8.92e-11 | 62.4 |
MS.gene35887.t1 | MTR_6g091800 | 25.667 | 300 | 189 | 7 | 38 | 314 | 19 | 307 | 9.75e-22 | 94.0 |
MS.gene35887.t1 | MTR_8g066975 | 30.263 | 304 | 165 | 13 | 38 | 311 | 8 | 294 | 1.26e-21 | 93.2 |
MS.gene35887.t1 | MTR_5g081150 | 27.148 | 291 | 188 | 9 | 38 | 310 | 34 | 318 | 3.63e-21 | 92.4 |
MS.gene35887.t1 | MTR_5g081150 | 33.537 | 164 | 100 | 3 | 166 | 325 | 75 | 233 | 2.22e-14 | 73.2 |
MS.gene35887.t1 | MTR_5g081150 | 29.148 | 223 | 137 | 6 | 8 | 215 | 109 | 325 | 4.10e-14 | 72.4 |
MS.gene35887.t1 | MTR_5g055410 | 26.619 | 278 | 177 | 6 | 54 | 313 | 37 | 305 | 1.03e-20 | 91.7 |
MS.gene35887.t1 | MTR_5g055410 | 31.111 | 180 | 107 | 7 | 54 | 218 | 135 | 312 | 1.32e-11 | 65.1 |
MS.gene35887.t1 | MTR_7g068340 | 27.240 | 279 | 178 | 7 | 54 | 319 | 103 | 369 | 1.06e-20 | 92.0 |
MS.gene35887.t1 | MTR_7g109135 | 30.603 | 232 | 148 | 8 | 91 | 313 | 1 | 228 | 2.72e-20 | 88.6 |
MS.gene35887.t1 | MTR_7g109135 | 31.792 | 173 | 98 | 7 | 54 | 211 | 61 | 228 | 1.58e-11 | 63.9 |
MS.gene35887.t1 | MTR_8g076760 | 26.087 | 276 | 180 | 9 | 52 | 307 | 28 | 299 | 1.19e-19 | 88.2 |
MS.gene35887.t1 | MTR_3g100570 | 25.962 | 312 | 192 | 9 | 39 | 316 | 7 | 313 | 3.20e-19 | 87.0 |
MS.gene35887.t1 | MTR_2g102010 | 28.302 | 265 | 160 | 7 | 39 | 287 | 18 | 268 | 3.32e-19 | 86.7 |
MS.gene35887.t1 | MTR_2g102010 | 29.834 | 181 | 108 | 6 | 48 | 213 | 120 | 296 | 8.72e-15 | 73.9 |
MS.gene35887.t1 | MTR_8g099910 | 26.214 | 309 | 195 | 8 | 22 | 312 | 51 | 344 | 4.58e-19 | 87.0 |
MS.gene35887.t1 | MTR_5g030530 | 29.667 | 300 | 172 | 13 | 38 | 311 | 8 | 294 | 1.00e-18 | 85.1 |
MS.gene35887.t1 | MTR_6g033280 | 26.897 | 290 | 185 | 6 | 33 | 310 | 58 | 332 | 2.24e-18 | 85.1 |
MS.gene35887.t1 | MTR_6g091800 | 23.765 | 324 | 189 | 7 | 38 | 314 | 19 | 331 | 2.65e-18 | 84.7 |
MS.gene35887.t1 | MTR_4g094578 | 24.211 | 285 | 191 | 6 | 38 | 310 | 29 | 300 | 3.77e-18 | 84.0 |
MS.gene35887.t1 | MTR_3g104810 | 25.658 | 304 | 168 | 7 | 51 | 307 | 45 | 337 | 3.98e-18 | 84.3 |
MS.gene35887.t1 | MTR_5g024770 | 25.704 | 284 | 174 | 6 | 33 | 310 | 16 | 268 | 4.73e-18 | 83.6 |
MS.gene35887.t1 | MTR_4g005330 | 22.289 | 332 | 207 | 10 | 8 | 313 | 47 | 353 | 6.01e-18 | 84.0 |
MS.gene35887.t1 | MTR_4g005330 | 22.074 | 299 | 197 | 8 | 39 | 313 | 1 | 287 | 2.06e-17 | 81.6 |
MS.gene35887.t1 | MTR_6g034145 | 26.236 | 263 | 161 | 6 | 75 | 314 | 1 | 253 | 3.59e-17 | 80.1 |
MS.gene35887.t1 | MTR_4g012850 | 27.308 | 260 | 170 | 6 | 38 | 287 | 16 | 266 | 3.66e-17 | 80.9 |
MS.gene35887.t1 | MTR_4g012850 | 28.829 | 222 | 140 | 5 | 5 | 211 | 74 | 292 | 4.67e-16 | 77.8 |
MS.gene35887.t1 | MTR_6g092210 | 26.848 | 257 | 161 | 6 | 75 | 314 | 1 | 247 | 4.81e-17 | 79.7 |
MS.gene35887.t1 | MTR_2g436930 | 27.615 | 239 | 140 | 7 | 104 | 315 | 4 | 236 | 7.75e-17 | 79.0 |
MS.gene35887.t1 | MTR_2g436930 | 25.238 | 210 | 132 | 4 | 29 | 214 | 29 | 237 | 8.57e-13 | 67.4 |
MS.gene35887.t1 | MTR_3g104600 | 26.861 | 309 | 187 | 8 | 34 | 313 | 31 | 329 | 7.80e-17 | 80.5 |
MS.gene35887.t1 | MTR_6g091800 | 26.250 | 240 | 143 | 7 | 38 | 254 | 19 | 247 | 2.97e-15 | 75.1 |
MS.gene35887.t1 | MTR_6g091800 | 26.250 | 240 | 143 | 7 | 38 | 254 | 19 | 247 | 3.93e-15 | 74.7 |
MS.gene35887.t1 | MTR_4g119770 | 26.295 | 251 | 144 | 7 | 40 | 255 | 16 | 260 | 4.96e-15 | 74.3 |
MS.gene35887.t1 | MTR_4g119770 | 24.074 | 216 | 139 | 4 | 129 | 324 | 11 | 221 | 4.12e-11 | 62.8 |
MS.gene35887.t1 | MTR_5g081150 | 33.537 | 164 | 100 | 3 | 166 | 325 | 75 | 233 | 8.24e-15 | 73.6 |
MS.gene35887.t1 | MTR_7g066690 | 26.263 | 297 | 182 | 12 | 40 | 314 | 19 | 300 | 8.83e-15 | 73.9 |
MS.gene35887.t1 | MTR_5g081150 | 33.537 | 164 | 100 | 3 | 166 | 325 | 75 | 233 | 9.29e-15 | 73.6 |
MS.gene35887.t1 | MTR_7g083790 | 26.224 | 286 | 183 | 7 | 40 | 312 | 83 | 353 | 1.17e-14 | 74.3 |
MS.gene35887.t1 | MTR_4g088545 | 27.178 | 287 | 186 | 7 | 39 | 307 | 13 | 294 | 1.77e-14 | 73.2 |
MS.gene35887.t1 | MTR_1g088995 | 29.258 | 229 | 146 | 6 | 33 | 255 | 32 | 250 | 2.39e-14 | 72.8 |
MS.gene35887.t1 | MTR_4g016730 | 24.908 | 273 | 170 | 7 | 54 | 313 | 105 | 355 | 2.96e-14 | 73.2 |
MS.gene35887.t1 | MTR_4g016730 | 22.222 | 180 | 126 | 3 | 30 | 209 | 188 | 353 | 1.62e-11 | 65.1 |
MS.gene35887.t1 | MTR_8g068890 | 24.841 | 314 | 191 | 8 | 39 | 316 | 11 | 315 | 3.03e-14 | 72.8 |
MS.gene35887.t1 | MTR_5g032420 | 24.688 | 320 | 191 | 7 | 39 | 316 | 11 | 322 | 6.33e-14 | 71.6 |
MS.gene35887.t1 | MTR_1g090330 | 22.887 | 284 | 191 | 8 | 42 | 307 | 18 | 291 | 6.35e-14 | 71.6 |
MS.gene35887.t1 | MTR_4g018750 | 26.102 | 295 | 181 | 13 | 40 | 312 | 17 | 296 | 1.36e-13 | 70.5 |
MS.gene35887.t1 | MTR_3g462140 | 29.012 | 162 | 108 | 3 | 54 | 209 | 136 | 296 | 2.74e-13 | 69.7 |
MS.gene35887.t1 | MTR_3g462140 | 25.413 | 303 | 194 | 11 | 32 | 314 | 9 | 299 | 6.91e-12 | 65.5 |
MS.gene35887.t1 | MTR_7g084400 | 25.123 | 203 | 137 | 4 | 17 | 209 | 186 | 383 | 1.87e-12 | 68.2 |
MS.gene35887.t1 | MTR_7g084400 | 29.255 | 188 | 128 | 3 | 134 | 320 | 209 | 392 | 1.82e-11 | 65.1 |
MS.gene35887.t1 | MTR_8g090210 | 25.753 | 299 | 188 | 9 | 33 | 310 | 109 | 394 | 2.91e-12 | 67.4 |
MS.gene35887.t1 | MTR_8g090210 | 27.322 | 183 | 121 | 5 | 131 | 311 | 109 | 281 | 4.05e-11 | 63.9 |
MS.gene35887.t1 | MTR_3g074490 | 25.888 | 197 | 126 | 6 | 131 | 321 | 115 | 297 | 1.06e-11 | 65.9 |
MS.gene35887.t1 | MTR_3g074490 | 25.743 | 303 | 183 | 11 | 33 | 310 | 115 | 400 | 5.23e-11 | 63.5 |
MS.gene35887.t1 | MTR_7g109135 | 31.792 | 173 | 98 | 7 | 54 | 211 | 40 | 207 | 1.40e-11 | 63.5 |
MS.gene35887.t1 | MTR_6g091910 | 26.974 | 152 | 106 | 1 | 163 | 314 | 63 | 209 | 1.46e-11 | 63.5 |
MS.gene35887.t1 | MTR_4g088545 | 27.273 | 242 | 157 | 6 | 39 | 262 | 13 | 253 | 1.64e-11 | 64.3 |
MS.gene35887.t1 | MTR_3g090820 | 25.781 | 256 | 157 | 8 | 82 | 310 | 135 | 384 | 2.03e-11 | 64.7 |
MS.gene35887.t1 | MTR_4g018750 | 25.957 | 235 | 144 | 10 | 40 | 252 | 17 | 243 | 4.67e-11 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene35887.t1 | AT1G07030 | 73.231 | 325 | 74 | 4 | 1 | 317 | 1 | 320 | 1.43e-164 | 461 |
MS.gene35887.t1 | AT1G07030 | 28.788 | 198 | 125 | 7 | 128 | 322 | 38 | 222 | 1.60e-12 | 67.8 |
MS.gene35887.t1 | AT2G30160 | 70.149 | 335 | 82 | 3 | 1 | 322 | 1 | 330 | 2.62e-161 | 453 |
MS.gene35887.t1 | AT1G07025 | 47.500 | 160 | 82 | 2 | 24 | 182 | 8 | 166 | 4.00e-38 | 133 |
MS.gene35887.t1 | AT1G34065 | 30.208 | 288 | 173 | 8 | 35 | 319 | 72 | 334 | 1.76e-37 | 137 |
MS.gene35887.t1 | AT1G34065 | 30.476 | 210 | 132 | 5 | 14 | 218 | 135 | 335 | 4.83e-18 | 84.0 |
MS.gene35887.t1 | AT1G34065 | 30.208 | 288 | 173 | 8 | 35 | 319 | 79 | 341 | 2.22e-37 | 137 |
MS.gene35887.t1 | AT1G34065 | 30.476 | 210 | 132 | 5 | 14 | 218 | 142 | 342 | 6.14e-18 | 83.6 |
MS.gene35887.t1 | AT4G39460 | 31.900 | 279 | 162 | 8 | 35 | 310 | 55 | 308 | 4.16e-36 | 133 |
MS.gene35887.t1 | AT4G39460 | 30.415 | 217 | 133 | 6 | 14 | 223 | 118 | 323 | 1.73e-16 | 79.3 |
MS.gene35887.t1 | AT4G39460 | 31.900 | 279 | 162 | 8 | 35 | 310 | 55 | 308 | 4.16e-36 | 133 |
MS.gene35887.t1 | AT4G39460 | 30.415 | 217 | 133 | 6 | 14 | 223 | 118 | 323 | 1.73e-16 | 79.3 |
MS.gene35887.t1 | AT4G39460 | 31.900 | 279 | 162 | 8 | 35 | 310 | 55 | 308 | 4.16e-36 | 133 |
MS.gene35887.t1 | AT4G39460 | 30.415 | 217 | 133 | 6 | 14 | 223 | 118 | 323 | 1.73e-16 | 79.3 |
MS.gene35887.t1 | AT1G74240 | 30.000 | 320 | 187 | 6 | 27 | 315 | 25 | 338 | 1.25e-34 | 130 |
MS.gene35887.t1 | AT4G11440 | 30.508 | 295 | 193 | 7 | 24 | 313 | 316 | 603 | 2.24e-33 | 130 |
MS.gene35887.t1 | AT4G11440 | 30.508 | 295 | 193 | 7 | 24 | 313 | 316 | 603 | 2.24e-33 | 130 |
MS.gene35887.t1 | AT4G32400 | 28.472 | 288 | 190 | 6 | 38 | 319 | 114 | 391 | 3.57e-33 | 126 |
MS.gene35887.t1 | AT4G32400 | 26.042 | 192 | 124 | 7 | 38 | 218 | 208 | 392 | 1.55e-11 | 65.1 |
MS.gene35887.t1 | AT5G15640 | 28.947 | 304 | 185 | 7 | 30 | 307 | 8 | 306 | 9.21e-31 | 118 |
MS.gene35887.t1 | AT5G15640 | 29.097 | 299 | 186 | 6 | 30 | 307 | 20 | 313 | 1.03e-30 | 118 |
MS.gene35887.t1 | AT1G74240 | 29.831 | 295 | 170 | 6 | 52 | 315 | 2 | 290 | 1.50e-29 | 115 |
MS.gene35887.t1 | AT4G01100 | 28.344 | 314 | 184 | 7 | 38 | 310 | 42 | 355 | 2.67e-27 | 110 |
MS.gene35887.t1 | AT4G01100 | 25.000 | 204 | 129 | 5 | 135 | 317 | 46 | 246 | 9.21e-12 | 65.9 |
MS.gene35887.t1 | AT4G01100 | 28.383 | 303 | 190 | 8 | 38 | 313 | 42 | 344 | 9.60e-27 | 108 |
MS.gene35887.t1 | AT4G01100 | 26.842 | 190 | 129 | 4 | 135 | 317 | 46 | 232 | 1.07e-14 | 74.3 |
MS.gene35887.t1 | AT2G37890 | 26.936 | 297 | 199 | 5 | 32 | 313 | 39 | 332 | 2.99e-26 | 107 |
MS.gene35887.t1 | AT2G37890 | 31.720 | 186 | 116 | 4 | 38 | 214 | 152 | 335 | 6.46e-21 | 92.0 |
MS.gene35887.t1 | AT2G37890 | 32.237 | 152 | 89 | 3 | 172 | 316 | 92 | 236 | 3.70e-13 | 69.7 |
MS.gene35887.t1 | AT3G55640 | 26.174 | 298 | 200 | 6 | 38 | 319 | 38 | 331 | 3.52e-26 | 106 |
MS.gene35887.t1 | AT3G55640 | 26.174 | 298 | 200 | 6 | 38 | 319 | 38 | 331 | 3.52e-26 | 106 |
MS.gene35887.t1 | AT5G42130 | 26.690 | 281 | 191 | 8 | 49 | 321 | 129 | 402 | 4.27e-26 | 107 |
MS.gene35887.t1 | AT5G26200 | 27.113 | 284 | 176 | 5 | 51 | 307 | 52 | 331 | 9.04e-26 | 105 |
MS.gene35887.t1 | AT2G47490 | 30.292 | 274 | 171 | 7 | 54 | 313 | 33 | 300 | 1.13e-25 | 104 |
MS.gene35887.t1 | AT2G47490 | 31.638 | 177 | 101 | 7 | 50 | 211 | 129 | 300 | 1.54e-11 | 64.7 |
MS.gene35887.t1 | AT1G72820 | 27.986 | 293 | 171 | 7 | 51 | 307 | 44 | 332 | 3.67e-25 | 103 |
MS.gene35887.t1 | AT1G72820 | 27.986 | 293 | 171 | 7 | 51 | 307 | 44 | 332 | 3.67e-25 | 103 |
MS.gene35887.t1 | AT4G01100 | 28.231 | 294 | 184 | 8 | 47 | 313 | 1 | 294 | 1.80e-24 | 101 |
MS.gene35887.t1 | AT4G01100 | 28.205 | 195 | 114 | 4 | 40 | 208 | 97 | 291 | 3.97e-18 | 83.6 |
MS.gene35887.t1 | AT4G01100 | 25.683 | 183 | 127 | 3 | 142 | 317 | 2 | 182 | 2.93e-14 | 72.8 |
MS.gene35887.t1 | AT5G61810 | 24.458 | 323 | 203 | 7 | 17 | 310 | 19 | 329 | 5.78e-23 | 97.8 |
MS.gene35887.t1 | AT5G61810 | 25.140 | 179 | 127 | 4 | 38 | 211 | 156 | 332 | 4.62e-13 | 69.3 |
MS.gene35887.t1 | AT1G25380 | 28.159 | 277 | 179 | 6 | 54 | 315 | 37 | 308 | 7.17e-23 | 97.8 |
MS.gene35887.t1 | AT1G25380 | 29.167 | 192 | 115 | 7 | 50 | 223 | 133 | 321 | 1.62e-11 | 65.1 |
MS.gene35887.t1 | AT1G25380 | 28.159 | 277 | 179 | 6 | 54 | 315 | 37 | 308 | 7.17e-23 | 97.8 |
MS.gene35887.t1 | AT1G25380 | 29.167 | 192 | 115 | 7 | 50 | 223 | 133 | 321 | 1.62e-11 | 65.1 |
MS.gene35887.t1 | AT5G51050 | 25.150 | 334 | 200 | 9 | 17 | 314 | 177 | 496 | 1.05e-22 | 98.6 |
MS.gene35887.t1 | AT5G51050 | 28.218 | 202 | 133 | 4 | 121 | 319 | 215 | 407 | 1.86e-13 | 71.2 |
MS.gene35887.t1 | AT2G17270 | 26.148 | 283 | 180 | 7 | 39 | 310 | 23 | 287 | 2.07e-22 | 95.9 |
MS.gene35887.t1 | AT5G61810 | 24.383 | 324 | 204 | 7 | 17 | 311 | 162 | 473 | 2.29e-22 | 97.8 |
MS.gene35887.t1 | AT5G61810 | 25.140 | 179 | 127 | 4 | 38 | 211 | 299 | 475 | 7.44e-13 | 69.3 |
MS.gene35887.t1 | AT1G79900 | 31.405 | 242 | 144 | 7 | 53 | 287 | 31 | 257 | 3.56e-22 | 94.7 |
MS.gene35887.t1 | AT1G79900 | 30.653 | 199 | 118 | 5 | 25 | 216 | 103 | 288 | 7.54e-20 | 88.6 |
MS.gene35887.t1 | AT3G53940 | 27.797 | 295 | 187 | 8 | 38 | 313 | 73 | 360 | 3.93e-22 | 95.9 |
MS.gene35887.t1 | AT3G53940 | 31.892 | 185 | 117 | 4 | 38 | 214 | 180 | 363 | 2.00e-20 | 91.3 |
MS.gene35887.t1 | AT3G53940 | 29.697 | 165 | 108 | 2 | 166 | 326 | 114 | 274 | 6.96e-14 | 72.0 |
MS.gene35887.t1 | AT5G01500 | 28.090 | 267 | 172 | 7 | 54 | 313 | 135 | 388 | 5.43e-21 | 93.2 |
MS.gene35887.t1 | AT2G35800 | 26.962 | 293 | 195 | 7 | 24 | 314 | 531 | 806 | 7.08e-21 | 94.0 |
MS.gene35887.t1 | AT1G14560 | 26.207 | 290 | 180 | 7 | 51 | 314 | 40 | 321 | 2.53e-20 | 90.5 |
MS.gene35887.t1 | AT1G14560 | 23.590 | 195 | 125 | 2 | 38 | 208 | 123 | 317 | 4.18e-14 | 72.4 |
MS.gene35887.t1 | AT5G46800 | 29.412 | 306 | 174 | 11 | 35 | 311 | 5 | 297 | 3.21e-20 | 89.7 |
MS.gene35887.t1 | AT5G46800 | 29.412 | 306 | 174 | 11 | 35 | 311 | 5 | 297 | 3.21e-20 | 89.7 |
MS.gene35887.t1 | AT5G46800 | 29.412 | 306 | 174 | 11 | 35 | 311 | 5 | 297 | 3.21e-20 | 89.7 |
MS.gene35887.t1 | AT3G20240 | 23.684 | 304 | 198 | 7 | 39 | 319 | 53 | 345 | 4.37e-20 | 89.7 |
MS.gene35887.t1 | AT3G51870 | 25.368 | 272 | 185 | 5 | 54 | 319 | 107 | 366 | 2.10e-19 | 88.2 |
MS.gene35887.t1 | AT3G51870 | 22.283 | 184 | 131 | 3 | 30 | 209 | 183 | 358 | 4.50e-12 | 66.6 |
MS.gene35887.t1 | AT5G07320 | 26.667 | 270 | 180 | 8 | 47 | 311 | 218 | 474 | 9.17e-19 | 87.0 |
MS.gene35887.t1 | AT5G07320 | 24.719 | 178 | 129 | 2 | 38 | 211 | 300 | 476 | 2.07e-12 | 68.2 |
MS.gene35887.t1 | AT4G26180 | 25.839 | 298 | 184 | 10 | 38 | 310 | 21 | 306 | 9.40e-19 | 85.9 |
MS.gene35887.t1 | AT4G24570 | 26.250 | 320 | 177 | 9 | 39 | 316 | 11 | 313 | 2.52e-18 | 84.3 |
MS.gene35887.t1 | AT5G66380 | 24.272 | 309 | 205 | 10 | 35 | 321 | 7 | 308 | 2.97e-18 | 84.3 |
MS.gene35887.t1 | AT5G01340 | 25.532 | 282 | 185 | 8 | 39 | 304 | 18 | 290 | 3.19e-18 | 84.0 |
MS.gene35887.t1 | AT5G14040 | 25.796 | 314 | 202 | 8 | 15 | 312 | 55 | 353 | 1.79e-17 | 82.8 |
MS.gene35887.t1 | AT5G09470 | 25.887 | 282 | 181 | 6 | 54 | 315 | 61 | 334 | 2.12e-17 | 82.0 |
MS.gene35887.t1 | AT2G26360 | 25.448 | 279 | 186 | 6 | 33 | 307 | 110 | 370 | 2.43e-17 | 82.4 |
MS.gene35887.t1 | AT1G14560 | 26.236 | 263 | 160 | 7 | 51 | 287 | 40 | 294 | 1.51e-16 | 79.3 |
MS.gene35887.t1 | AT1G14560 | 31.250 | 176 | 106 | 4 | 148 | 310 | 43 | 216 | 3.47e-12 | 66.6 |
MS.gene35887.t1 | AT1G14560 | 23.392 | 171 | 107 | 2 | 38 | 184 | 123 | 293 | 9.29e-11 | 62.4 |
MS.gene35887.t1 | AT4G26180 | 25.818 | 275 | 167 | 10 | 38 | 287 | 21 | 283 | 1.68e-16 | 79.0 |
MS.gene35887.t1 | AT4G26180 | 26.738 | 187 | 123 | 4 | 135 | 310 | 25 | 208 | 7.00e-11 | 62.4 |
MS.gene35887.t1 | AT3G48850 | 23.944 | 284 | 189 | 5 | 39 | 310 | 72 | 340 | 5.14e-16 | 78.2 |
MS.gene35887.t1 | AT5G48970 | 24.611 | 321 | 191 | 10 | 40 | 318 | 24 | 335 | 8.29e-16 | 77.4 |
MS.gene35887.t1 | AT5G48970 | 24.887 | 221 | 143 | 4 | 123 | 325 | 13 | 228 | 2.30e-13 | 70.5 |
MS.gene35887.t1 | AT2G22500 | 24.516 | 310 | 195 | 8 | 39 | 317 | 11 | 312 | 1.40e-15 | 76.6 |
MS.gene35887.t1 | AT3G21390 | 23.344 | 317 | 195 | 9 | 40 | 314 | 21 | 331 | 2.42e-15 | 76.3 |
MS.gene35887.t1 | AT3G21390 | 25.352 | 213 | 138 | 4 | 123 | 319 | 10 | 217 | 3.69e-12 | 66.6 |
MS.gene35887.t1 | AT3G21390 | 23.344 | 317 | 195 | 9 | 40 | 314 | 43 | 353 | 4.10e-15 | 75.5 |
MS.gene35887.t1 | AT3G21390 | 25.352 | 213 | 138 | 4 | 123 | 319 | 32 | 239 | 5.15e-12 | 66.6 |
MS.gene35887.t1 | AT1G14560 | 23.590 | 195 | 125 | 2 | 38 | 208 | 25 | 219 | 9.69e-15 | 72.8 |
MS.gene35887.t1 | AT3G55640 | 30.519 | 154 | 99 | 3 | 166 | 315 | 79 | 228 | 2.02e-14 | 72.4 |
MS.gene35887.t1 | AT3G55640 | 30.519 | 154 | 99 | 3 | 166 | 315 | 79 | 228 | 2.02e-14 | 72.4 |
MS.gene35887.t1 | AT5G48970 | 25.461 | 271 | 164 | 8 | 77 | 318 | 3 | 264 | 3.14e-14 | 72.0 |
MS.gene35887.t1 | AT4G03115 | 26.383 | 235 | 158 | 6 | 25 | 255 | 29 | 252 | 3.69e-14 | 72.4 |
MS.gene35887.t1 | AT3G53940 | 29.697 | 165 | 108 | 2 | 166 | 326 | 114 | 274 | 3.93e-14 | 72.0 |
MS.gene35887.t1 | AT3G54110 | 24.000 | 300 | 193 | 9 | 42 | 320 | 19 | 304 | 5.28e-14 | 72.0 |
MS.gene35887.t1 | AT3G54110 | 25.683 | 183 | 130 | 2 | 38 | 214 | 118 | 300 | 4.92e-12 | 66.2 |
MS.gene35887.t1 | AT4G03115 | 26.383 | 235 | 158 | 6 | 25 | 255 | 61 | 284 | 5.63e-14 | 72.4 |
MS.gene35887.t1 | AT2G33820 | 24.832 | 298 | 193 | 9 | 27 | 301 | 7 | 296 | 1.73e-13 | 70.5 |
MS.gene35887.t1 | AT4G27940 | 27.607 | 163 | 92 | 3 | 163 | 307 | 146 | 300 | 8.63e-13 | 68.9 |
MS.gene35887.t1 | AT4G03115 | 28.000 | 175 | 120 | 3 | 82 | 255 | 12 | 181 | 1.83e-12 | 66.6 |
MS.gene35887.t1 | AT4G03115 | 28.000 | 175 | 120 | 3 | 82 | 255 | 20 | 189 | 2.00e-12 | 66.6 |
MS.gene35887.t1 | AT5G58970 | 24.503 | 302 | 195 | 11 | 32 | 313 | 10 | 298 | 3.15e-12 | 66.6 |
MS.gene35887.t1 | AT1G14140 | 24.483 | 290 | 188 | 10 | 38 | 307 | 16 | 294 | 6.59e-12 | 65.9 |
MS.gene35887.t1 | AT5G56450 | 25.275 | 182 | 127 | 4 | 39 | 212 | 146 | 326 | 6.80e-12 | 65.9 |
MS.gene35887.t1 | AT2G33820 | 24.183 | 306 | 193 | 10 | 27 | 301 | 7 | 304 | 5.19e-11 | 63.2 |
MS.gene35887.t1 | AT2G33820 | 28.415 | 183 | 118 | 4 | 134 | 307 | 20 | 198 | 9.87e-11 | 62.0 |
Find 82 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACTGGCAATTCATGATTTC+TGG | 0.143348 | 5.1:-56264379 | MS.gene35887:CDS |
CTGACGGAAACGGATTTAAT+TGG | 0.211854 | 5.1:+56264274 | None:intergenic |
CTTTCTGCTCGTTGTAATCT+TGG | 0.231051 | 5.1:+56260298 | None:intergenic |
GTTGAGTAATAGTGGTTATA+AGG | 0.239383 | 5.1:-56264008 | MS.gene35887:CDS |
GTGAAATCAGGTCGGTAATC+TGG | 0.268484 | 5.1:+56264445 | None:intergenic |
GCGAAATGCACAGCAGTAAA+AGG | 0.303287 | 5.1:+56263896 | None:intergenic |
CTCGTTGTAATCTTGGAAAA+AGG | 0.310351 | 5.1:+56260305 | None:intergenic |
TACAACGAGCAGAAAGATTC+TGG | 0.317286 | 5.1:-56260291 | MS.gene35887:CDS |
GGTATCGGCGCAATGGGCCT+TGG | 0.320857 | 5.1:-56264199 | MS.gene35887:CDS |
GCTACTGCCGGGGCGGCTGC+TGG | 0.323395 | 5.1:-56263797 | MS.gene35887:CDS |
TGTTAAAACAATAGTGAAAA+AGG | 0.326887 | 5.1:-56260424 | MS.gene35887:CDS |
AATGGGCCTTGGCGCCGGTC+CGG | 0.341444 | 5.1:-56264188 | MS.gene35887:CDS |
ATGATTTCTGGATCCATTGC+TGG | 0.344227 | 5.1:-56264367 | MS.gene35887:CDS |
GGCGTTAAGTTTGTGAAATC+AGG | 0.351974 | 5.1:+56264433 | None:intergenic |
GGCGCAATGGGCCTTGGCGC+CGG | 0.356819 | 5.1:-56264193 | MS.gene35887:CDS |
CTCCCGCAGCCGCTATCTGC+TGG | 0.375742 | 5.1:-56260350 | MS.gene35887:CDS |
CTGCCGGGGCGGCTGCTGGT+GGG | 0.377867 | 5.1:-56263793 | MS.gene35887:CDS |
TGCGCCGATACCGCGGTATA+AGG | 0.382409 | 5.1:+56264210 | None:intergenic |
AGTGTTTACGCCGATGGATA+TGG | 0.393475 | 5.1:-56264047 | MS.gene35887:CDS |
ACTGCCGGGGCGGCTGCTGG+TGG | 0.398253 | 5.1:-56263794 | MS.gene35887:CDS |
CGGGGCGGCTGCTGGTGGGT+TGG | 0.405879 | 5.1:-56263789 | MS.gene35887:CDS |
CTCTCATCATCAACACTCTC+TGG | 0.417304 | 5.1:+56263833 | None:intergenic |
TTGATTGTTCATGCTACTGC+CGG | 0.428369 | 5.1:-56263809 | MS.gene35887:CDS |
CAACCCACCAGCAGCCGCCC+CGG | 0.433417 | 5.1:+56263790 | None:intergenic |
AAACTTTGTTCTTGCTTCTG+TGG | 0.444930 | 5.1:+56264474 | None:intergenic |
TACCGCGGTATCGGCGCAAT+GGG | 0.459673 | 5.1:-56264205 | MS.gene35887:CDS |
TGTTCTTGCTTCTGTGGCCA+TGG | 0.460311 | 5.1:+56264480 | None:intergenic |
CGTGGGCCGGACCGGCGCCA+AGG | 0.462222 | 5.1:+56264182 | None:intergenic |
TCGTGAGTTGACGGCGGCGC+CGG | 0.465043 | 5.1:+56264412 | None:intergenic |
ATAAACAGCGTGGGCCGGAC+CGG | 0.468252 | 5.1:+56264174 | None:intergenic |
TGAAATCAGGTCGGTAATCT+GGG | 0.470095 | 5.1:+56264446 | None:intergenic |
TTGAGTAATAGTGGTTATAA+GGG | 0.471100 | 5.1:-56264007 | MS.gene35887:CDS |
CTCACGACGGTCTTCACTAC+TGG | 0.471340 | 5.1:-56264396 | MS.gene35887:CDS |
AGGTTGCAGTTGAGTAATAG+TGG | 0.471563 | 5.1:-56264016 | MS.gene35887:CDS |
GGAGCATGAAAGAGCATCCT+TGG | 0.472086 | 5.1:+56260369 | None:intergenic |
TCATGCGAGGGTGGGTTCCA+AGG | 0.475084 | 5.1:-56260386 | MS.gene35887:CDS |
AAGAGCTTGACTGACGGAAA+CGG | 0.478473 | 5.1:+56264264 | None:intergenic |
TGATTGTTCATGCTACTGCC+GGG | 0.479934 | 5.1:-56263808 | MS.gene35887:CDS |
GTATAAGGCAGACGGGCCTT+CGG | 0.490929 | 5.1:+56264225 | None:intergenic |
TGCTGGTCTACATATGAAGC+TGG | 0.491218 | 5.1:-56260333 | MS.gene35887:CDS |
TTTCCGTCAGTCAAGCTCTT+CGG | 0.494358 | 5.1:-56264261 | MS.gene35887:CDS |
GACCAGCAGATAGCGGCTGC+GGG | 0.507968 | 5.1:+56260348 | None:intergenic |
ACTTATGAAGCTGCGAAAAG+AGG | 0.510074 | 5.1:-56263872 | MS.gene35887:CDS |
TCTGCCTTATACCGCGGTAT+CGG | 0.511096 | 5.1:-56264214 | MS.gene35887:CDS |
AGACCAGCAGATAGCGGCTG+CGG | 0.512887 | 5.1:+56260347 | None:intergenic |
CTTATGAAGCTGCGAAAAGA+GGG | 0.516796 | 5.1:-56263871 | MS.gene35887:CDS |
TAAAACTCAATTGCAATGCC+AGG | 0.525231 | 5.1:-56263735 | MS.gene35887:intron |
ACAAAGGGCTCATGCGAGGG+TGG | 0.536925 | 5.1:-56260395 | MS.gene35887:CDS |
GAGAAATAAACAGCGTGGGC+CGG | 0.537692 | 5.1:+56264169 | None:intergenic |
AGGTTCAAAAGTGGTTCCAT+TGG | 0.544925 | 5.1:-56260453 | MS.gene35887:CDS |
CTCTGTTTCACCATATCCAT+CGG | 0.552176 | 5.1:+56264037 | None:intergenic |
TTCATGGTGCAGGGTGTGTG+TGG | 0.554065 | 5.1:-56260483 | MS.gene35887:intron |
TGACGCAGTGTTTACGCCGA+TGG | 0.559443 | 5.1:-56264053 | MS.gene35887:CDS |
TGAAGACCGTCGTGAGTTGA+CGG | 0.559910 | 5.1:+56264403 | None:intergenic |
TTTAATTGGACAAGATGTGA+TGG | 0.562571 | 5.1:+56264288 | None:intergenic |
ATACCGCGGTATCGGCGCAA+TGG | 0.570095 | 5.1:-56264206 | MS.gene35887:CDS |
AGGGTGTGTGTGGATGTGAT+AGG | 0.574367 | 5.1:-56260473 | MS.gene35887:CDS |
GGCCCATTGCGCCGATACCG+CGG | 0.581793 | 5.1:+56264203 | None:intergenic |
CGGTCAATCTTAAAATCCGA+AGG | 0.591376 | 5.1:-56264241 | MS.gene35887:CDS |
GTGTTCGATACAACCAGCAA+TGG | 0.594126 | 5.1:+56264354 | None:intergenic |
TGCTGGTTGTATCGAACACA+TGG | 0.602280 | 5.1:-56264350 | MS.gene35887:CDS |
AACTGAGAAATAAACAGCGT+GGG | 0.604326 | 5.1:+56264165 | None:intergenic |
CAAAGGGCTCATGCGAGGGT+GGG | 0.612108 | 5.1:-56260394 | MS.gene35887:CDS |
TACCGCGGTATAAGGCAGAC+GGG | 0.621026 | 5.1:+56264218 | None:intergenic |
TGATTTCACAAACTTAACGC+CGG | 0.621178 | 5.1:-56264431 | MS.gene35887:CDS |
TGGTTCGGGTGTTTGTGCGA+CGG | 0.622075 | 5.1:-56264083 | MS.gene35887:CDS |
GGATACAAAGGGCTCATGCG+AGG | 0.624051 | 5.1:-56260399 | MS.gene35887:CDS |
GGCCCGTCTGCCTTATACCG+CGG | 0.625142 | 5.1:-56264220 | MS.gene35887:CDS |
GATTGTTCATGCTACTGCCG+GGG | 0.628010 | 5.1:-56263807 | MS.gene35887:CDS |
TGACCGAAGAGCTTGACTGA+CGG | 0.634127 | 5.1:+56264258 | None:intergenic |
GATACAAAGGGCTCATGCGA+GGG | 0.636199 | 5.1:-56260398 | MS.gene35887:CDS |
ATACCGCGGTATAAGGCAGA+CGG | 0.640078 | 5.1:+56264217 | None:intergenic |
TGTTCATGCTACTGCCGGGG+CGG | 0.649622 | 5.1:-56263804 | MS.gene35887:CDS |
CAGAGAGTGTTGATGATGAG+AGG | 0.663254 | 5.1:-56263832 | MS.gene35887:CDS |
TTCGGGTGTTTGTGCGACGG+TGG | 0.664905 | 5.1:-56264080 | MS.gene35887:CDS |
ATATGTAGACCAGCAGATAG+CGG | 0.675850 | 5.1:+56260341 | None:intergenic |
GGATGTGATAGGTTCAAAAG+TGG | 0.680142 | 5.1:-56260462 | MS.gene35887:CDS |
AAACTGAGAAATAAACAGCG+TGG | 0.696014 | 5.1:+56264164 | None:intergenic |
CGATGGATATGGTGAAACAG+AGG | 0.697564 | 5.1:-56264036 | MS.gene35887:CDS |
TTAAGTTTGTGAAATCAGGT+CGG | 0.707755 | 5.1:+56264437 | None:intergenic |
AGACCGTCGTGAGTTGACGG+CGG | 0.717166 | 5.1:+56264406 | None:intergenic |
GCGCCGCCGTCAACTCACGA+CGG | 0.745640 | 5.1:-56264409 | MS.gene35887:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTCTTTTAGGTTATTTTT+AGG | + | chr5.1:56261644-56261663 | None:intergenic | 15.0% |
!!! | GATTATTTGTTATTTTTTGT+TGG | - | chr5.1:56263923-56263942 | MS.gene35887:CDS | 15.0% |
!!! | TTCTTTTCTTTATTTCTTTT+AGG | + | chr5.1:56261655-56261674 | None:intergenic | 15.0% |
!!! | TTTCTTTTAGGTTATTTTTA+GGG | + | chr5.1:56261643-56261662 | None:intergenic | 15.0% |
!! | AAAGAATGATTGTAAATGAA+GGG | - | chr5.1:56264184-56264203 | MS.gene35887:CDS | 20.0% |
!! | AAATTGTTTACTACTCAAAT+AGG | - | chr5.1:56263636-56263655 | MS.gene35887:intron | 20.0% |
!! | AATTCATAATATATGTTGAG+GGG | - | chr5.1:56262639-56262658 | MS.gene35887:intron | 20.0% |
!! | ATTAGGTTAAATTACACATT+TGG | + | chr5.1:56263865-56263884 | None:intergenic | 20.0% |
!! | GAATTCATAATATATGTTGA+GGG | - | chr5.1:56262638-56262657 | MS.gene35887:intron | 20.0% |
!! | TAAAGAATGATTGTAAATGA+AGG | - | chr5.1:56264183-56264202 | MS.gene35887:CDS | 20.0% |
!! | TGATTCATTATAAGATGTTA+TGG | - | chr5.1:56262393-56262412 | MS.gene35887:intron | 20.0% |
!! | TGTTAAAACAATAGTGAAAA+AGG | - | chr5.1:56264332-56264351 | MS.gene35887:CDS | 20.0% |
!!! | AAAAGGTTTTAAATCTGATT+AGG | - | chr5.1:56263901-56263920 | MS.gene35887:CDS | 20.0% |
!!! | AAAGTTTTACGATTTTTGAT+AGG | + | chr5.1:56263470-56263489 | None:intergenic | 20.0% |
!!! | AAGATTTTTGTTATTCTTGT+TGG | - | chr5.1:56262460-56262479 | MS.gene35887:intron | 20.0% |
!!! | AATTATTCTTTGTTCTGTTT+TGG | + | chr5.1:56263806-56263825 | None:intergenic | 20.0% |
!!! | ACAAAAATCTTTTTCAACTT+AGG | + | chr5.1:56262451-56262470 | None:intergenic | 20.0% |
!!! | ACTCAAGATGTTATTTTATT+TGG | - | chr5.1:56264076-56264095 | MS.gene35887:CDS | 20.0% |
!!! | ACTTTTATTATACGAATGTT+TGG | - | chr5.1:56264116-56264135 | MS.gene35887:CDS | 20.0% |
!!! | ATGTGAGAATTTCTTTTTAA+GGG | + | chr5.1:56260624-56260643 | None:intergenic | 20.0% |
!!! | TAAATTTTAAACCGTTTCTA+GGG | + | chr5.1:56261930-56261949 | None:intergenic | 20.0% |
!!! | TAGAAACGGTTTAAAATTTA+GGG | - | chr5.1:56261930-56261949 | MS.gene35887:intron | 20.0% |
!!! | TATTCCCTATCTATTTTATA+GGG | - | chr5.1:56262599-56262618 | MS.gene35887:intron | 20.0% |
!!! | TATTTTTCAGTACTATTTAC+AGG | - | chr5.1:56263694-56263713 | MS.gene35887:intron | 20.0% |
!!! | TTGTGGAATGAAATTTTTTT+GGG | - | chr5.1:56261805-56261824 | MS.gene35887:intron | 20.0% |
! | AAAACAATAGTGAAAAAGGA+CGG | - | chr5.1:56264336-56264355 | MS.gene35887:CDS | 25.0% |
! | AAAAGCCCTATAAAATAGAT+AGG | + | chr5.1:56262607-56262626 | None:intergenic | 25.0% |
! | AAAGCCCTATAAAATAGATA+GGG | + | chr5.1:56262606-56262625 | None:intergenic | 25.0% |
! | AAGAATGATTGTAAATGAAG+GGG | - | chr5.1:56264185-56264204 | MS.gene35887:CDS | 25.0% |
! | AATTGACATAATAATGAAGC+TGG | - | chr5.1:56262896-56262915 | MS.gene35887:intron | 25.0% |
! | ACATATAAAATTGACACCAT+TGG | + | chr5.1:56262576-56262595 | None:intergenic | 25.0% |
! | ATATTGTTTGATATGGTCTA+TGG | - | chr5.1:56264018-56264037 | MS.gene35887:CDS | 25.0% |
! | CTTAAAAAGAAATTCTCACA+TGG | - | chr5.1:56260623-56260642 | MS.gene35887:intron | 25.0% |
! | CTTCATATGCTAAACTTTAA+AGG | + | chr5.1:56261162-56261181 | None:intergenic | 25.0% |
! | GAAACCACAAAATTAGTTAA+GGG | - | chr5.1:56263838-56263857 | MS.gene35887:CDS | 25.0% |
! | GGAATTCATAATATATGTTG+AGG | - | chr5.1:56262637-56262656 | MS.gene35887:intron | 25.0% |
! | TCAAATTACACTACACTATA+GGG | + | chr5.1:56261285-56261304 | None:intergenic | 25.0% |
! | TCGTTTGATCAGAAAATATT+AGG | + | chr5.1:56263882-56263901 | None:intergenic | 25.0% |
! | TGAAACCACAAAATTAGTTA+AGG | - | chr5.1:56263837-56263856 | MS.gene35887:CDS | 25.0% |
! | TGAAGCAAATGATATTAGTA+GGG | - | chr5.1:56262252-56262271 | MS.gene35887:intron | 25.0% |
! | TGGACTAAATAGTATATCAT+AGG | + | chr5.1:56261321-56261340 | None:intergenic | 25.0% |
! | TGTTGTCATATTGTTTGATA+TGG | - | chr5.1:56264011-56264030 | MS.gene35887:CDS | 25.0% |
! | TTCAAATTACACTACACTAT+AGG | + | chr5.1:56261286-56261305 | None:intergenic | 25.0% |
! | TTGAGTAATAGTGGTTATAA+GGG | - | chr5.1:56260749-56260768 | MS.gene35887:intron | 25.0% |
! | TTTACATATATGTATGCCAT+TGG | - | chr5.1:56263725-56263744 | MS.gene35887:intron | 25.0% |
!! | ATGTGCTCTTTTAATGAATT+TGG | - | chr5.1:56261191-56261210 | MS.gene35887:intron | 25.0% |
!! | CATGTGAGAATTTCTTTTTA+AGG | + | chr5.1:56260625-56260644 | None:intergenic | 25.0% |
!! | CTAAATTTTAAACCGTTTCT+AGG | + | chr5.1:56261931-56261950 | None:intergenic | 25.0% |
!! | CTAGAAACGGTTTAAAATTT+AGG | - | chr5.1:56261929-56261948 | MS.gene35887:intron | 25.0% |
!! | CTATTCCCTATCTATTTTAT+AGG | - | chr5.1:56262598-56262617 | MS.gene35887:intron | 25.0% |
!! | TAACAATTATTTTCAGACAG+TGG | + | chr5.1:56263990-56264009 | None:intergenic | 25.0% |
!! | TATTTTCTGATCAAACGAAA+AGG | - | chr5.1:56263884-56263903 | MS.gene35887:CDS | 25.0% |
!! | TGTGCTCTTTTAATGAATTT+GGG | - | chr5.1:56261192-56261211 | MS.gene35887:intron | 25.0% |
!!! | AAATCTTTTTCAACTTAGGA+TGG | + | chr5.1:56262447-56262466 | None:intergenic | 25.0% |
!!! | AATGGTTTTGAAAAATTAGG+GGG | - | chr5.1:56262505-56262524 | MS.gene35887:intron | 25.0% |
!!! | AATTTTGTTGTTTGAACCAA+TGG | - | chr5.1:56262557-56262576 | MS.gene35887:intron | 25.0% |
!!! | ACAGAATTGTTGATTTTTGT+CGG | - | chr5.1:56263751-56263770 | MS.gene35887:CDS | 25.0% |
!!! | ATAGGGCTTTTTTGTTAAAT+TGG | - | chr5.1:56262616-56262635 | MS.gene35887:intron | 25.0% |
!!! | GAATGGTTTTGAAAAATTAG+GGG | - | chr5.1:56262504-56262523 | MS.gene35887:intron | 25.0% |
!!! | GGAATGGTTTTGAAAAATTA+GGG | - | chr5.1:56262503-56262522 | MS.gene35887:intron | 25.0% |
!!! | GGTGGAATATATTTTTTCTT+AGG | + | chr5.1:56262960-56262979 | None:intergenic | 25.0% |
!!! | GTTGCTATTTGACAATATTT+TGG | + | chr5.1:56261341-56261360 | None:intergenic | 25.0% |
!!! | GTTGTGGAATGAAATTTTTT+TGG | - | chr5.1:56261804-56261823 | MS.gene35887:intron | 25.0% |
!!! | TATTTTTTGTTGGAGCATTA+TGG | - | chr5.1:56263933-56263952 | MS.gene35887:CDS | 25.0% |
AACTTATCAAGGAAAATGCA+TGG | - | chr5.1:56263407-56263426 | MS.gene35887:intron | 30.0% | |
ACCAACTAAAGTAAAGTTAG+GGG | - | chr5.1:56263779-56263798 | MS.gene35887:CDS | 30.0% | |
AGAGAGAGAGAAATAAATAC+AGG | - | chr5.1:56263591-56263610 | MS.gene35887:intron | 30.0% | |
CAAATTACACTACACTATAG+GGG | + | chr5.1:56261284-56261303 | None:intergenic | 30.0% | |
GACCAACTAAAGTAAAGTTA+GGG | - | chr5.1:56263778-56263797 | MS.gene35887:CDS | 30.0% | |
GAGAGAGAGAAATAAATACA+GGG | - | chr5.1:56263592-56263611 | MS.gene35887:intron | 30.0% | |
GAGATAAGAAAGAATCAAGT+GGG | + | chr5.1:56263041-56263060 | None:intergenic | 30.0% | |
GGGTATTACAAATATAAGGT+TGG | - | chr5.1:56262287-56262306 | MS.gene35887:intron | 30.0% | |
GTGAAGCAAATGATATTAGT+AGG | - | chr5.1:56262251-56262270 | MS.gene35887:intron | 30.0% | |
GTTGAGTAATAGTGGTTATA+AGG | - | chr5.1:56260748-56260767 | MS.gene35887:intron | 30.0% | |
TAAGACATCTGCTTTGATTA+AGG | + | chr5.1:56261398-56261417 | None:intergenic | 30.0% | |
TCAAACTATTACGAGAGATT+TGG | - | chr5.1:56262343-56262362 | MS.gene35887:intron | 30.0% | |
TCAACAATTCTGTTAACCAA+TGG | + | chr5.1:56263744-56263763 | None:intergenic | 30.0% | |
TCTTATCTCATACAAGAAGT+TGG | - | chr5.1:56263052-56263071 | MS.gene35887:intron | 30.0% | |
TGACCAACTAAAGTAAAGTT+AGG | - | chr5.1:56263777-56263796 | MS.gene35887:CDS | 30.0% | |
TGAGATAAGAAAGAATCAAG+TGG | + | chr5.1:56263042-56263061 | None:intergenic | 30.0% | |
TGGAGAATTGATCTTAACAT+TGG | - | chr5.1:56264249-56264268 | MS.gene35887:CDS | 30.0% | |
TTAAGTTTGTGAAATCAGGT+CGG | + | chr5.1:56260322-56260341 | None:intergenic | 30.0% | |
TTGGATAGTTGTAGAGTTAT+GGG | - | chr5.1:56262306-56262325 | MS.gene35887:intron | 30.0% | |
TTTAATTGGACAAGATGTGA+TGG | + | chr5.1:56260471-56260490 | None:intergenic | 30.0% | |
! | CTATCTAAACTAGTACTGAA+AGG | + | chr5.1:56263530-56263549 | None:intergenic | 30.0% |
! | GATATTAGTAGGGCTTTAAT+TGG | - | chr5.1:56262262-56262281 | MS.gene35887:intron | 30.0% |
! | GGTAGGGTATTACAAATATA+AGG | - | chr5.1:56262283-56262302 | MS.gene35887:intron | 30.0% |
! | TGCATTTTCCTTGATAAGTT+TGG | + | chr5.1:56263407-56263426 | None:intergenic | 30.0% |
!! | GTGCTTTTTATGCTAGTTAT+AGG | - | chr5.1:56260816-56260835 | MS.gene35887:intron | 30.0% |
!! | TGAGTTTTAACAACATCAAG+CGG | + | chr5.1:56261010-56261029 | None:intergenic | 30.0% |
!! | TGTTTTTGATTGTGTGAAGA+GGG | - | chr5.1:56260772-56260791 | MS.gene35887:intron | 30.0% |
!!! | GGGAATGGTTTTGAAAAATT+AGG | - | chr5.1:56262502-56262521 | MS.gene35887:intron | 30.0% |
AAACTCTTTGTGCTTATGTG+GGG | - | chr5.1:56262195-56262214 | MS.gene35887:intron | 35.0% | |
AAACTGAGAAATAAACAGCG+TGG | + | chr5.1:56260595-56260614 | None:intergenic | 35.0% | |
AAACTTTGTTCTTGCTTCTG+TGG | + | chr5.1:56260285-56260304 | None:intergenic | 35.0% | |
AAAGAAGAACCTTTGACTGA+TGG | - | chr5.1:56261741-56261760 | MS.gene35887:intron | 35.0% | |
AACTGAGAAATAAACAGCGT+GGG | + | chr5.1:56260594-56260613 | None:intergenic | 35.0% | |
AGAAAGAATCAAGTGGGAAA+AGG | + | chr5.1:56263035-56263054 | None:intergenic | 35.0% | |
AGTTACTAAACTGTGAGAAG+AGG | - | chr5.1:56261868-56261887 | MS.gene35887:intron | 35.0% | |
ATACGAATGTTTGGTATCCT+TGG | - | chr5.1:56264125-56264144 | MS.gene35887:CDS | 35.0% | |
ATAGTTGTAGAGTTATGGGT+TGG | - | chr5.1:56262310-56262329 | MS.gene35887:intron | 35.0% | |
ATTGTTGTCATAGCTATACC+TGG | + | chr5.1:56261042-56261061 | None:intergenic | 35.0% | |
ATTTCTCTCTCTCTCATAAC+TGG | + | chr5.1:56263585-56263604 | None:intergenic | 35.0% | |
CAAACTCTTTGTGCTTATGT+GGG | - | chr5.1:56262194-56262213 | MS.gene35887:intron | 35.0% | |
CATAATATATGTTGAGGGGA+TGG | - | chr5.1:56262643-56262662 | MS.gene35887:intron | 35.0% | |
CCAACAAAAAGAATGAGAGT+GGG | - | chr5.1:56263099-56263118 | MS.gene35887:intron | 35.0% | |
CTCGTTGTAATCTTGGAAAA+AGG | + | chr5.1:56264454-56264473 | None:intergenic | 35.0% | |
CTGTTCTCTTTCTCTGTTAT+TGG | + | chr5.1:56261449-56261468 | None:intergenic | 35.0% | |
CTTTCTCTGTTATTGGCATT+GGG | + | chr5.1:56261442-56261461 | None:intergenic | 35.0% | |
GAGAGAATCCAAACTTATCA+AGG | - | chr5.1:56263396-56263415 | MS.gene35887:intron | 35.0% | |
GTTACTAAACTGTGAGAAGA+GGG | - | chr5.1:56261869-56261888 | MS.gene35887:intron | 35.0% | |
GTTGGATAGTTGTAGAGTTA+TGG | - | chr5.1:56262305-56262324 | MS.gene35887:intron | 35.0% | |
TAAAACTCAATTGCAATGCC+AGG | - | chr5.1:56261021-56261040 | MS.gene35887:intron | 35.0% | |
TACGAATGTTTGGTATCCTT+GGG | - | chr5.1:56264126-56264145 | MS.gene35887:CDS | 35.0% | |
TACTGGCAATTCATGATTTC+TGG | - | chr5.1:56260377-56260396 | MS.gene35887:CDS | 35.0% | |
TAGAATCATTGTCAAACCCA+AGG | + | chr5.1:56264145-56264164 | None:intergenic | 35.0% | |
TAGTTAATAGCGCGATATAG+CGG | + | chr5.1:56262109-56262128 | None:intergenic | 35.0% | |
TAGTTGTAGAGTTATGGGTT+GGG | - | chr5.1:56262311-56262330 | MS.gene35887:intron | 35.0% | |
TCCAACAAAAAGAATGAGAG+TGG | - | chr5.1:56263098-56263117 | MS.gene35887:intron | 35.0% | |
TCCCCTAACTTTACTTTAGT+TGG | + | chr5.1:56263783-56263802 | None:intergenic | 35.0% | |
TCTTTCTCTGTTATTGGCAT+TGG | + | chr5.1:56261443-56261462 | None:intergenic | 35.0% | |
TGAAAAAGGACGGATACAAA+GGG | - | chr5.1:56264346-56264365 | MS.gene35887:CDS | 35.0% | |
TGAAAATGACAACCAAACCT+AGG | + | chr5.1:56262132-56262151 | None:intergenic | 35.0% | |
TGATAAGTTTGGATTCTCTC+CGG | + | chr5.1:56263396-56263415 | None:intergenic | 35.0% | |
TGATTTCACAAACTTAACGC+CGG | - | chr5.1:56260325-56260344 | MS.gene35887:CDS | 35.0% | |
TGTCAATTCCTATACAGTTC+TGG | + | chr5.1:56262884-56262903 | None:intergenic | 35.0% | |
TTCACATTTGAACACAGTAG+TGG | - | chr5.1:56261966-56261985 | MS.gene35887:intron | 35.0% | |
TTGTTGAAATGGTTAGGGAA+TGG | - | chr5.1:56262487-56262506 | MS.gene35887:intron | 35.0% | |
TTTGAGAATGTGAGTTCCAT+AGG | - | chr5.1:56262171-56262190 | MS.gene35887:intron | 35.0% | |
! | AAACCGTTTCTAGGGAAATT+TGG | + | chr5.1:56261922-56261941 | None:intergenic | 35.0% |
! | AACCGTTTCTAGGGAAATTT+GGG | + | chr5.1:56261921-56261940 | None:intergenic | 35.0% |
! | AGTGATCATTTTGTTCATGC+TGG | - | chr5.1:56260653-56260672 | MS.gene35887:intron | 35.0% |
! | ATGTTTTCCTCCATCTTGTA+AGG | + | chr5.1:56262931-56262950 | None:intergenic | 35.0% |
! | CTCATTCTTTTTGTTGGAGA+GGG | + | chr5.1:56263096-56263115 | None:intergenic | 35.0% |
! | GTGATTTTATGCGACTGAAT+GGG | - | chr5.1:56262690-56262709 | MS.gene35887:intron | 35.0% |
! | GTGTGTTGTTGAAATGGTTA+GGG | - | chr5.1:56262482-56262501 | MS.gene35887:intron | 35.0% |
! | TAGTAGGGCTTTAATTGGTA+GGG | - | chr5.1:56262267-56262286 | MS.gene35887:intron | 35.0% |
! | TCTCATTCTTTTTGTTGGAG+AGG | + | chr5.1:56263097-56263116 | None:intergenic | 35.0% |
! | TGATTTTATGCGACTGAATG+GGG | - | chr5.1:56262691-56262710 | MS.gene35887:intron | 35.0% |
! | TGGTCCCTTAACTAATTTTG+TGG | + | chr5.1:56263845-56263864 | None:intergenic | 35.0% |
! | TGTGATTTTATGCGACTGAA+TGG | - | chr5.1:56262689-56262708 | MS.gene35887:intron | 35.0% |
! | TTAGTAGGGCTTTAATTGGT+AGG | - | chr5.1:56262266-56262285 | MS.gene35887:intron | 35.0% |
! | TTGTTGGTGTGTTGTTGAAA+TGG | - | chr5.1:56262476-56262495 | MS.gene35887:intron | 35.0% |
!! | ATGGTGTTGTTTGATTCATG+TGG | - | chr5.1:56263952-56263971 | MS.gene35887:CDS | 35.0% |
!! | GTGTTTTTGATTGTGTGAAG+AGG | - | chr5.1:56260771-56260790 | MS.gene35887:intron | 35.0% |
!! | TCATTTTGTTCATGCTGGTT+CGG | - | chr5.1:56260658-56260677 | MS.gene35887:intron | 35.0% |
!! | TCCTATACAGTTCTGGAATT+AGG | + | chr5.1:56262877-56262896 | None:intergenic | 35.0% |
!!! | AGAGAAGTTTTGTTGTGCAA+TGG | - | chr5.1:56261767-56261786 | MS.gene35887:intron | 35.0% |
!!! | TGTTTTAACAACATCGCCAA+TGG | + | chr5.1:56264322-56264341 | None:intergenic | 35.0% |
!!! | TTTTGGGTTTTGTTTTGCCA+TGG | - | chr5.1:56261821-56261840 | MS.gene35887:intron | 35.0% |
AAAAGAATGAGAGTGGGAAG+AGG | - | chr5.1:56263105-56263124 | MS.gene35887:intron | 40.0% | |
AAACTGTGAGAAGAGGGAAA+AGG | - | chr5.1:56261875-56261894 | MS.gene35887:intron | 40.0% | |
AAAGAATGAGAGTGGGAAGA+GGG | - | chr5.1:56263106-56263125 | MS.gene35887:intron | 40.0% | |
AACTGTGAGAAGAGGGAAAA+GGG | - | chr5.1:56261876-56261895 | MS.gene35887:intron | 40.0% | |
AAGAATCAAGTGGGAAAAGG+TGG | + | chr5.1:56263032-56263051 | None:intergenic | 40.0% | |
AAGCACAAAGAGTTTGCCTA+TGG | + | chr5.1:56262190-56262209 | None:intergenic | 40.0% | |
ACTTATGAAGCTGCGAAAAG+AGG | - | chr5.1:56260884-56260903 | MS.gene35887:intron | 40.0% | |
AGGGGATGGCTAAAACTTAA+AGG | - | chr5.1:56262657-56262676 | MS.gene35887:intron | 40.0% | |
AGGTTCAAAAGTGGTTCCAT+TGG | - | chr5.1:56264303-56264322 | MS.gene35887:CDS | 40.0% | |
AGGTTGCAGTTGAGTAATAG+TGG | - | chr5.1:56260740-56260759 | MS.gene35887:intron | 40.0% | |
AGTCGCATAAAATCACACTC+AGG | + | chr5.1:56262686-56262705 | None:intergenic | 40.0% | |
ATATACCACATAAGCGCAGA+AGG | + | chr5.1:56261218-56261237 | None:intergenic | 40.0% | |
ATATGTAGACCAGCAGATAG+CGG | + | chr5.1:56264418-56264437 | None:intergenic | 40.0% | |
CAACATGAAGTTATGGTACC+GGG | - | chr5.1:56262738-56262757 | MS.gene35887:intron | 40.0% | |
CATTCACAAGTCACAAACAC+AGG | + | chr5.1:56261242-56261261 | None:intergenic | 40.0% | |
CCAACATGAAGTTATGGTAC+CGG | - | chr5.1:56262737-56262756 | MS.gene35887:intron | 40.0% | |
CGCTATTAACTACCTAGGTT+TGG | - | chr5.1:56262117-56262136 | MS.gene35887:intron | 40.0% | |
CGGTACCATAACTTCATGTT+GGG | + | chr5.1:56262739-56262758 | None:intergenic | 40.0% | |
CGGTCAATCTTAAAATCCGA+AGG | - | chr5.1:56260515-56260534 | MS.gene35887:intron | 40.0% | |
CTCCAACGAGAGAAAAGATA+GGG | + | chr5.1:56264234-56264253 | None:intergenic | 40.0% | |
CTCTGTTTCACCATATCCAT+CGG | + | chr5.1:56260722-56260741 | None:intergenic | 40.0% | |
CTTATGAAGCTGCGAAAAGA+GGG | - | chr5.1:56260885-56260904 | MS.gene35887:intron | 40.0% | |
CTTTCTGCTCGTTGTAATCT+TGG | + | chr5.1:56264461-56264480 | None:intergenic | 40.0% | |
GCAAACTCTTTGTGCTTATG+TGG | - | chr5.1:56262193-56262212 | MS.gene35887:intron | 40.0% | |
GCCTAATTCCAGAACTGTAT+AGG | - | chr5.1:56262873-56262892 | MS.gene35887:intron | 40.0% | |
GGATGGCTAAAACTTAAAGG+TGG | - | chr5.1:56262660-56262679 | MS.gene35887:intron | 40.0% | |
GGATGTGATAGGTTCAAAAG+TGG | - | chr5.1:56264294-56264313 | MS.gene35887:CDS | 40.0% | |
GGCGTTAAGTTTGTGAAATC+AGG | + | chr5.1:56260326-56260345 | None:intergenic | 40.0% | |
GGTACCATAACTTCATGTTG+GGG | + | chr5.1:56262738-56262757 | None:intergenic | 40.0% | |
GTGAAAAAGGACGGATACAA+AGG | - | chr5.1:56264345-56264364 | MS.gene35887:CDS | 40.0% | |
TACAACGAGCAGAAAGATTC+TGG | - | chr5.1:56264465-56264484 | MS.gene35887:CDS | 40.0% | |
TATCGCGCTATTAACTACCT+AGG | - | chr5.1:56262112-56262131 | MS.gene35887:intron | 40.0% | |
TATTGCGAACTTCTCTGCTA+TGG | - | chr5.1:56262048-56262067 | MS.gene35887:intron | 40.0% | |
TCCCCAAATTTCCCTAGAAA+CGG | - | chr5.1:56261916-56261935 | MS.gene35887:intron | 40.0% | |
TCTCCAACGAGAGAAAAGAT+AGG | + | chr5.1:56264235-56264254 | None:intergenic | 40.0% | |
TGAAATCAGGTCGGTAATCT+GGG | + | chr5.1:56260313-56260332 | None:intergenic | 40.0% | |
TGGGAAAAGGTGGTTTAATG+TGG | + | chr5.1:56263022-56263041 | None:intergenic | 40.0% | |
TGGTCTATGGTGTTTGATCA+AGG | - | chr5.1:56264031-56264050 | MS.gene35887:CDS | 40.0% | |
TTGATTGTTCATGCTACTGC+CGG | - | chr5.1:56260947-56260966 | MS.gene35887:intron | 40.0% | |
! | ACCGTTTCTAGGGAAATTTG+GGG | + | chr5.1:56261920-56261939 | None:intergenic | 40.0% |
! | ATCCCTATCTTTTCTCTCGT+TGG | - | chr5.1:56264229-56264248 | MS.gene35887:CDS | 40.0% |
! | ATGATTTCTGGATCCATTGC+TGG | - | chr5.1:56260389-56260408 | MS.gene35887:CDS | 40.0% |
! | CCCACTCTCATTCTTTTTGT+TGG | + | chr5.1:56263102-56263121 | None:intergenic | 40.0% |
! | CTGACGGAAACGGATTTAAT+TGG | + | chr5.1:56260485-56260504 | None:intergenic | 40.0% |
! | CTGTGTTTGTGACTTGTGAA+TGG | - | chr5.1:56261240-56261259 | MS.gene35887:intron | 40.0% |
! | GGTGTGTTGTTGAAATGGTT+AGG | - | chr5.1:56262481-56262500 | MS.gene35887:intron | 40.0% |
! | TCTGGAATTAGGCAGTAACA+GGG | + | chr5.1:56262866-56262885 | None:intergenic | 40.0% |
!! | AGGGAAATGAGGAGTTGATA+TGG | - | chr5.1:56263137-56263156 | MS.gene35887:intron | 40.0% |
!! | GGCTTGCATGTGAGTTTTAA+CGG | + | chr5.1:56260450-56260469 | None:intergenic | 40.0% |
!! | GTGAGTTTTAACGGTGTCAA+CGG | + | chr5.1:56260441-56260460 | None:intergenic | 40.0% |
!! | TGAGTTTTAACGGTGTCAAC+GGG | + | chr5.1:56260440-56260459 | None:intergenic | 40.0% |
!! | TTCTGGAATTAGGCAGTAAC+AGG | + | chr5.1:56262867-56262886 | None:intergenic | 40.0% |
!! | TTGGGTGCTGTTATGATGAT+AGG | - | chr5.1:56262816-56262835 | MS.gene35887:intron | 40.0% |
!!! | AAGTTTTGTTGTGCAATGGC+TGG | - | chr5.1:56261771-56261790 | MS.gene35887:intron | 40.0% |
!!! | AGTTTTGTTGTGCAATGGCT+GGG | - | chr5.1:56261772-56261791 | MS.gene35887:intron | 40.0% |
!!! | CATTTTGTTCATGCTGGTTC+GGG | - | chr5.1:56260659-56260678 | MS.gene35887:intron | 40.0% |
!!! | GGATTTTTTGACAACTGCGA+TGG | - | chr5.1:56263260-56263279 | MS.gene35887:intron | 40.0% |
AAGAGCTTGACTGACGGAAA+CGG | + | chr5.1:56260495-56260514 | None:intergenic | 45.0% | |
AGTGTTTACGCCGATGGATA+TGG | - | chr5.1:56260709-56260728 | MS.gene35887:intron | 45.0% | |
ATGGCCCACGACAAGAATAT+GGG | + | chr5.1:56263365-56263384 | None:intergenic | 45.0% | |
ATTGCAGACTGCAGAGAGTT+TGG | - | chr5.1:56262797-56262816 | MS.gene35887:intron | 45.0% | |
CAGTACTCCTTACAAGATGG+AGG | - | chr5.1:56262921-56262940 | MS.gene35887:intron | 45.0% | |
CCGGTACCATAACTTCATGT+TGG | + | chr5.1:56262740-56262759 | None:intergenic | 45.0% | |
CGATGGATATGGTGAAACAG+AGG | - | chr5.1:56260720-56260739 | MS.gene35887:intron | 45.0% | |
CTAGGGAAATTTGGGGATCT+AGG | + | chr5.1:56261913-56261932 | None:intergenic | 45.0% | |
CTCTCATCATCAACACTCTC+TGG | + | chr5.1:56260926-56260945 | None:intergenic | 45.0% | |
CTGGAATTAGGCAGTAACAG+GGG | + | chr5.1:56262865-56262884 | None:intergenic | 45.0% | |
GAGAAGAGGGAAAAGGGTTA+GGG | - | chr5.1:56261882-56261901 | MS.gene35887:intron | 45.0% | |
GAGCAGTACTCCTTACAAGA+TGG | - | chr5.1:56262918-56262937 | MS.gene35887:intron | 45.0% | |
GATATAGCGGCATATCGAAG+CGG | + | chr5.1:56262096-56262115 | None:intergenic | 45.0% | |
GCGAAATGCACAGCAGTAAA+AGG | + | chr5.1:56260863-56260882 | None:intergenic | 45.0% | |
GGATTTGTGCATTCTGCACT+TGG | + | chr5.1:56262844-56262863 | None:intergenic | 45.0% | |
GTGAAATCAGGTCGGTAATC+TGG | + | chr5.1:56260314-56260333 | None:intergenic | 45.0% | |
GTGTTCGATACAACCAGCAA+TGG | + | chr5.1:56260405-56260424 | None:intergenic | 45.0% | |
TGAGAAGAGGGAAAAGGGTT+AGG | - | chr5.1:56261881-56261900 | MS.gene35887:intron | 45.0% | |
TGATTGTTCATGCTACTGCC+GGG | - | chr5.1:56260948-56260967 | MS.gene35887:intron | 45.0% | |
TTCCCCCATATTCTTGTCGT+GGG | - | chr5.1:56263358-56263377 | MS.gene35887:intron | 45.0% | |
TTCTCTCAGCCATCAGTCAA+AGG | + | chr5.1:56261753-56261772 | None:intergenic | 45.0% | |
TTGCAGACTGCAGAGAGTTT+GGG | - | chr5.1:56262798-56262817 | MS.gene35887:intron | 45.0% | |
TTTCCGTCAGTCAAGCTCTT+CGG | - | chr5.1:56260495-56260514 | MS.gene35887:intron | 45.0% | |
! | TGCTGGTCTACATATGAAGC+TGG | - | chr5.1:56264423-56264442 | MS.gene35887:CDS | 45.0% |
! | TGCTGGTTGTATCGAACACA+TGG | - | chr5.1:56260406-56260425 | MS.gene35887:CDS | 45.0% |
!! | CAGAGAGTGTTGATGATGAG+AGG | - | chr5.1:56260924-56260943 | MS.gene35887:intron | 45.0% |
!! | CTGTTTGTGCAGCGGATTTT+TGG | - | chr5.1:56263333-56263352 | MS.gene35887:intron | 45.0% |
!! | GAGCGCGAAGTGTTGTTAAA+TGG | - | chr5.1:56263207-56263226 | MS.gene35887:intron | 45.0% |
!! | GATTCTGGAACTGTCACCTA+AGG | - | chr5.1:56264480-56264499 | MS.gene35887:CDS | 45.0% |
!! | GTTTTGAGTGAGGAAGGGTT+TGG | - | chr5.1:56260794-56260813 | MS.gene35887:intron | 45.0% |
!! | TAAATGGTGTTGCACCCCTA+TGG | - | chr5.1:56263223-56263242 | MS.gene35887:intron | 45.0% |
!!! | AAGAGGGTTTTGAGTGAGGA+AGG | - | chr5.1:56260788-56260807 | MS.gene35887:intron | 45.0% |
!!! | AGAGGGTTTTGAGTGAGGAA+GGG | - | chr5.1:56260789-56260808 | MS.gene35887:intron | 45.0% |
!!! | GGTTTTGTTTTGCCATGGCT+GGG | - | chr5.1:56261826-56261845 | MS.gene35887:intron | 45.0% |
!!! | TGTGAAGAGGGTTTTGAGTG+AGG | - | chr5.1:56260784-56260803 | MS.gene35887:intron | 45.0% |
AAACAGAACACTGCGGCCTA+TGG | + | chr5.1:56263319-56263338 | None:intergenic | 50.0% | |
ACCACAGCATTCTGCCATAG+GGG | + | chr5.1:56263240-56263259 | None:intergenic | 50.0% | |
ACCTTGAAGCAGCACAAACC+CGG | + | chr5.1:56262759-56262778 | None:intergenic | 50.0% | |
AGGGTGTGTGTGGATGTGAT+AGG | - | chr5.1:56264283-56264302 | MS.gene35887:CDS | 50.0% | |
ATACCGCGGTATAAGGCAGA+CGG | + | chr5.1:56260542-56260561 | None:intergenic | 50.0% | |
ATCTGCTCCTTCTCGGTCAA+GGG | + | chr5.1:56262981-56263000 | None:intergenic | 50.0% | |
CACCACAGCATTCTGCCATA+GGG | + | chr5.1:56263241-56263260 | None:intergenic | 50.0% | |
CACGACAAGAATATGGGGGA+AGG | + | chr5.1:56263359-56263378 | None:intergenic | 50.0% | |
CTCTGCTATGGCCATTACCA+GGG | - | chr5.1:56262060-56262079 | MS.gene35887:intron | 50.0% | |
CTTCCCCCATATTCTTGTCG+TGG | - | chr5.1:56263357-56263376 | MS.gene35887:intron | 50.0% | |
GAGAAATAAACAGCGTGGGC+CGG | + | chr5.1:56260590-56260609 | None:intergenic | 50.0% | |
GAGAGGGATGCATGTATGAG+AGG | + | chr5.1:56263080-56263099 | None:intergenic | 50.0% | |
GATACAAAGGGCTCATGCGA+GGG | - | chr5.1:56264358-56264377 | MS.gene35887:CDS | 50.0% | |
GATGGCCCACGACAAGAATA+TGG | + | chr5.1:56263366-56263385 | None:intergenic | 50.0% | |
GATTGTTCATGCTACTGCCG+GGG | - | chr5.1:56260949-56260968 | MS.gene35887:intron | 50.0% | |
GCAGTGTTCTGTTTGTGCAG+CGG | - | chr5.1:56263325-56263344 | MS.gene35887:intron | 50.0% | |
GCTGCACAAACAGAACACTG+CGG | + | chr5.1:56263326-56263345 | None:intergenic | 50.0% | |
GGCTGGGAGTGAAAAGACAA+TGG | - | chr5.1:56261842-56261861 | MS.gene35887:intron | 50.0% | |
GGGAGAAGATGAGGGAAATG+AGG | - | chr5.1:56263126-56263145 | MS.gene35887:intron | 50.0% | |
GGGGATCAAAACACAGCCTT+AGG | - | chr5.1:56262710-56262729 | MS.gene35887:intron | 50.0% | |
GGTGCCCCAACATGAAGTTA+TGG | - | chr5.1:56262731-56262750 | MS.gene35887:intron | 50.0% | |
TATTCCACCCTTGACCGAGA+AGG | - | chr5.1:56262971-56262990 | MS.gene35887:intron | 50.0% | |
TCTCTGCTATGGCCATTACC+AGG | - | chr5.1:56262059-56262078 | MS.gene35887:intron | 50.0% | |
TCTGCCTTATACCGCGGTAT+CGG | - | chr5.1:56260542-56260561 | MS.gene35887:intron | 50.0% | |
TGACCGAAGAGCTTGACTGA+CGG | + | chr5.1:56260501-56260520 | None:intergenic | 50.0% | |
TGGCCCACGACAAGAATATG+GGG | + | chr5.1:56263364-56263383 | None:intergenic | 50.0% | |
TGGGAAGAGGGAGAAGATGA+GGG | - | chr5.1:56263118-56263137 | MS.gene35887:intron | 50.0% | |
TTCGCAATAGCAGCTGCTCA+AGG | + | chr5.1:56262037-56262056 | None:intergenic | 50.0% | |
! | ACTTCATGTTGGGGCACCTA+AGG | + | chr5.1:56262729-56262748 | None:intergenic | 50.0% |
! | TGAAGACCGTCGTGAGTTGA+CGG | + | chr5.1:56260356-56260375 | None:intergenic | 50.0% |
! | TGTCTTTTCACTCCCAGCCA+TGG | + | chr5.1:56261841-56261860 | None:intergenic | 50.0% |
!! | ATTCTCTCCGGTGTTGTCGA+TGG | + | chr5.1:56263384-56263403 | None:intergenic | 50.0% |
!! | GGAGCATGAAAGAGCATCCT+TGG | + | chr5.1:56264390-56264409 | None:intergenic | 50.0% |
!!! | GGCTGGGAGAAGTTTTGTTG+TGG | - | chr5.1:56261788-56261807 | MS.gene35887:intron | 50.0% |
!!! | GGGTTTTGTTTTGCCATGGC+TGG | - | chr5.1:56261825-56261844 | MS.gene35887:intron | 50.0% |
ACCCCTATGGCAGAATGCTG+TGG | - | chr5.1:56263236-56263255 | MS.gene35887:intron | 55.0% | |
AGCACGGATCTGCTCCTTCT+CGG | + | chr5.1:56262988-56263007 | None:intergenic | 55.0% | |
CCACCACAGCATTCTGCCAT+AGG | + | chr5.1:56263242-56263261 | None:intergenic | 55.0% | |
CCTATGGCAGAATGCTGTGG+TGG | - | chr5.1:56263239-56263258 | MS.gene35887:intron | 55.0% | |
CTCACGACGGTCTTCACTAC+TGG | - | chr5.1:56260360-56260379 | MS.gene35887:CDS | 55.0% | |
GATCTGCTCCTTCTCGGTCA+AGG | + | chr5.1:56262982-56263001 | None:intergenic | 55.0% | |
GCACACTGTCGTGACAAACG+TGG | + | chr5.1:56262224-56262243 | None:intergenic | 55.0% | |
GGATACAAAGGGCTCATGCG+AGG | - | chr5.1:56264357-56264376 | MS.gene35887:CDS | 55.0% | |
GGCCCACGACAAGAATATGG+GGG | + | chr5.1:56263363-56263382 | None:intergenic | 55.0% | |
GGTGGTTTAATGTGGCAGCG+AGG | + | chr5.1:56263014-56263033 | None:intergenic | 55.0% | |
GTATAAGGCAGACGGGCCTT+CGG | + | chr5.1:56260534-56260553 | None:intergenic | 55.0% | |
GTGGGAAGAGGGAGAAGATG+AGG | - | chr5.1:56263117-56263136 | MS.gene35887:intron | 55.0% | |
TACCGCGGTATAAGGCAGAC+GGG | + | chr5.1:56260541-56260560 | None:intergenic | 55.0% | |
TGACGCAGTGTTTACGCCGA+TGG | - | chr5.1:56260703-56260722 | MS.gene35887:intron | 55.0% | |
TGCTATGGCCATTACCAGGG+CGG | - | chr5.1:56262063-56262082 | MS.gene35887:intron | 55.0% | |
TTGGGCCTTCTGCGCTTATG+TGG | - | chr5.1:56261210-56261229 | MS.gene35887:intron | 55.0% | |
! | AAGGTGCTATAGCGCCTCCT+GGG | + | chr5.1:56262018-56262037 | None:intergenic | 55.0% |
! | TGGTTCGGGTGTTTGTGCGA+CGG | - | chr5.1:56260673-56260692 | MS.gene35887:intron | 55.0% |
!! | ACCGGGTTTGTGCTGCTTCA+AGG | - | chr5.1:56262755-56262774 | MS.gene35887:intron | 55.0% |
!! | CTGGGTAGCGGACAGGTTAA+CGG | + | chr5.1:56262000-56262019 | None:intergenic | 55.0% |
ACAAAGGGCTCATGCGAGGG+TGG | - | chr5.1:56264361-56264380 | MS.gene35887:CDS | 60.0% | |
ATAAACAGCGTGGGCCGGAC+CGG | + | chr5.1:56260585-56260604 | None:intergenic | 60.0% | |
CAAAGGGCTCATGCGAGGGT+GGG | - | chr5.1:56264362-56264381 | MS.gene35887:CDS | 60.0% | |
CGGCATATCGAAGCGGACGT+TGG | + | chr5.1:56262089-56262108 | None:intergenic | 60.0% | |
CGTTAACCTGTCCGCTACCC+AGG | - | chr5.1:56261998-56262017 | MS.gene35887:intron | 60.0% | |
CTATAGCGCCTCCTGGGTAG+CGG | + | chr5.1:56262012-56262031 | None:intergenic | 60.0% | |
GCCTGCCATTGCAGCACCAT+AGG | - | chr5.1:56263300-56263319 | MS.gene35887:intron | 60.0% | |
TAACCTGTCCGCTACCCAGG+AGG | - | chr5.1:56262001-56262020 | MS.gene35887:intron | 60.0% | |
TCGTGGGCCATCGACAACAC+CGG | - | chr5.1:56263374-56263393 | MS.gene35887:intron | 60.0% | |
TGCTCCTTCTCGGTCAAGGG+TGG | + | chr5.1:56262978-56262997 | None:intergenic | 60.0% | |
TGTGGCAGCGAGGTTGAGCA+CGG | + | chr5.1:56263004-56263023 | None:intergenic | 60.0% | |
TGTTCATGCTACTGCCGGGG+CGG | - | chr5.1:56260952-56260971 | MS.gene35887:intron | 60.0% | |
TTCGGGTGTTTGTGCGACGG+TGG | - | chr5.1:56260676-56260695 | MS.gene35887:intron | 60.0% | |
! | AGACCAGCAGATAGCGGCTG+CGG | + | chr5.1:56264412-56264431 | None:intergenic | 60.0% |
! | AGACCGTCGTGAGTTGACGG+CGG | + | chr5.1:56260353-56260372 | None:intergenic | 60.0% |
! | CAAGGTGCTATAGCGCCTCC+TGG | + | chr5.1:56262019-56262038 | None:intergenic | 60.0% |
! | TCATGCGAGGGTGGGTTCCA+AGG | - | chr5.1:56264370-56264389 | MS.gene35887:CDS | 60.0% |
! | TGCGCCGATACCGCGGTATA+AGG | + | chr5.1:56260549-56260568 | None:intergenic | 60.0% |
!! | ATACCGCGGTATCGGCGCAA+TGG | - | chr5.1:56260550-56260569 | MS.gene35887:intron | 60.0% |
!! | GCCTATGGTGCTGCAATGGC+AGG | + | chr5.1:56263304-56263323 | None:intergenic | 60.0% |
!! | TACCGCGGTATCGGCGCAAT+GGG | - | chr5.1:56260551-56260570 | MS.gene35887:intron | 60.0% |
!! | TGCGGCCTATGGTGCTGCAA+TGG | + | chr5.1:56263308-56263327 | None:intergenic | 60.0% |
GACGTTGGCCGCCCTGGTAA+TGG | + | chr5.1:56262074-56262093 | None:intergenic | 65.0% | |
GGCCCGTCTGCCTTATACCG+CGG | - | chr5.1:56260536-56260555 | MS.gene35887:intron | 65.0% | |
! | GACCAGCAGATAGCGGCTGC+GGG | + | chr5.1:56264411-56264430 | None:intergenic | 65.0% |
!! | GGTATCGGCGCAATGGGCCT+TGG | - | chr5.1:56260557-56260576 | MS.gene35887:intron | 65.0% |
CTCCCGCAGCCGCTATCTGC+TGG | - | chr5.1:56264406-56264425 | MS.gene35887:CDS | 70.0% | |
GCGCCGCCGTCAACTCACGA+CGG | - | chr5.1:56260347-56260366 | MS.gene35887:CDS | 70.0% | |
! | GGCCCATTGCGCCGATACCG+CGG | + | chr5.1:56260556-56260575 | None:intergenic | 70.0% |
! | TCGTGAGTTGACGGCGGCGC+CGG | + | chr5.1:56260347-56260366 | None:intergenic | 70.0% |
!! | AATGGGCCTTGGCGCCGGTC+CGG | - | chr5.1:56260568-56260587 | MS.gene35887:intron | 70.0% |
CAACCCACCAGCAGCCGCCC+CGG | + | chr5.1:56260969-56260988 | None:intergenic | 75.0% | |
GAAGCGGACGTTGGCCGCCC+TGG | + | chr5.1:56262080-56262099 | None:intergenic | 75.0% | |
GGCGCAATGGGCCTTGGCGC+CGG | - | chr5.1:56260563-56260582 | MS.gene35887:intron | 75.0% | |
!! | GCGCCTCCTGGGTAGCGGAC+AGG | + | chr5.1:56262007-56262026 | None:intergenic | 75.0% |
! | ACTGCCGGGGCGGCTGCTGG+TGG | - | chr5.1:56260962-56260981 | MS.gene35887:intron | 80.0% |
! | CTGCCGGGGCGGCTGCTGGT+GGG | - | chr5.1:56260963-56260982 | MS.gene35887:intron | 80.0% |
! | GCTACTGCCGGGGCGGCTGC+TGG | - | chr5.1:56260959-56260978 | MS.gene35887:intron | 80.0% |
!! | CGGGGCGGCTGCTGGTGGGT+TGG | - | chr5.1:56260967-56260986 | MS.gene35887:intron | 80.0% |
! | CGTGGGCCGGACCGGCGCCA+AGG | + | chr5.1:56260577-56260596 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 56260278 | 56264500 | 56260278 | ID=MS.gene35887 |
chr5.1 | mRNA | 56260278 | 56264500 | 56260278 | ID=MS.gene35887.t1;Parent=MS.gene35887 |
chr5.1 | exon | 56263736 | 56264500 | 56263736 | ID=MS.gene35887.t1.exon1;Parent=MS.gene35887.t1 |
chr5.1 | CDS | 56263736 | 56264500 | 56263736 | ID=cds.MS.gene35887.t1;Parent=MS.gene35887.t1 |
chr5.1 | exon | 56260278 | 56260493 | 56260278 | ID=MS.gene35887.t1.exon2;Parent=MS.gene35887.t1 |
chr5.1 | CDS | 56260278 | 56260493 | 56260278 | ID=cds.MS.gene35887.t1;Parent=MS.gene35887.t1 |
Gene Sequence |
Protein sequence |