AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011236


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011236.t1 MTR_8g018310 99.789 474 1 0 1 474 1 474 0.0 974
MS.gene011236.t1 MTR_2g099670 83.648 477 73 5 1 474 1 475 0.0 811
MS.gene011236.t1 MTR_8g018310 99.735 378 1 0 1 378 1 378 0.0 788
MS.gene011236.t1 MTR_4g126010 75.523 478 89 7 1 474 1 454 0.0 692
MS.gene011236.t1 MTR_2g099670 81.490 416 72 5 62 474 10 423 0.0 686
MS.gene011236.t1 MTR_2g039930 68.936 470 141 4 1 469 1 466 0.0 655
MS.gene011236.t1 MTR_1g069720 59.789 475 156 8 1 465 1 450 0.0 545
MS.gene011236.t1 MTR_7g097160 77.538 325 64 3 1 318 1 323 0.0 541
MS.gene011236.t1 MTR_1g042280 79.180 317 63 2 1 314 2 318 0.0 540
MS.gene011236.t1 MTR_1g075870 79.798 297 59 1 1 296 2 298 0.0 520
MS.gene011236.t1 MTR_2g039930 66.581 389 125 4 82 469 1 385 0.0 516
MS.gene011236.t1 MTR_1g075870 79.798 297 59 1 1 296 2 298 0.0 516
MS.gene011236.t1 MTR_6g087070 77.926 299 65 1 1 298 1 299 1.29e-178 507
MS.gene011236.t1 MTR_8g102930 76.589 299 69 1 1 298 1 299 1.71e-174 496
MS.gene011236.t1 MTR_1g042280 79.496 278 54 2 40 314 9 286 3.85e-168 476
MS.gene011236.t1 MTR_3g110180 65.964 332 106 3 1 326 1 331 3.03e-162 466
MS.gene011236.t1 MTR_0492s0030 71.000 300 84 2 1 297 1 300 5.71e-161 460
MS.gene011236.t1 MTR_0543s0020 71.000 300 84 2 1 297 1 300 5.71e-161 460
MS.gene011236.t1 MTR_3g110180 65.964 332 105 4 1 326 1 330 2.12e-160 461
MS.gene011236.t1 MTR_1g004990 66.144 319 107 1 1 318 1 319 4.50e-160 460
MS.gene011236.t1 MTR_1g075870 81.250 240 44 1 58 296 2 241 7.74e-151 431
MS.gene011236.t1 MTR_7g097160 78.571 182 30 3 144 318 25 204 2.37e-98 299
MS.gene011236.t1 MTR_7g006030 37.276 279 157 6 9 272 37 312 6.68e-57 199
MS.gene011236.t1 MTR_7g085540 38.408 289 159 7 4 276 140 425 9.64e-57 200
MS.gene011236.t1 MTR_1g007150 37.828 267 154 6 9 266 124 387 2.95e-56 198
MS.gene011236.t1 MTR_3g110240 38.951 267 151 6 9 266 121 384 3.14e-56 198
MS.gene011236.t1 MTR_1g116210 37.956 274 157 6 9 272 119 389 1.01e-55 197
MS.gene011236.t1 MTR_8g014050 36.957 276 151 8 9 266 128 398 1.51e-50 183
MS.gene011236.t1 MTR_7g116400 58.462 65 26 1 82 145 3 67 1.83e-18 80.5
MS.gene011236.t1 MTR_5g022030 27.074 229 151 8 2 222 92 312 1.45e-13 73.2
MS.gene011236.t1 MTR_5g022030 27.074 229 151 8 2 222 92 312 1.56e-13 73.2
MS.gene011236.t1 MTR_5g007590 44.595 74 33 1 72 145 54 119 1.34e-12 65.1
MS.gene011236.t1 MTR_4g128820 31.447 159 98 5 1 153 2 155 7.22e-12 67.8
MS.gene011236.t1 MTR_3g466400 27.197 239 120 11 1 213 5 215 1.21e-11 67.0
MS.gene011236.t1 MTR_3g086120 27.619 210 132 10 11 211 610 808 6.22e-11 65.5
MS.gene011236.t1 MTR_3g086120 27.619 210 132 10 11 211 610 808 6.71e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011236.t1 AT1G72710 76.170 470 104 6 1 467 1 465 0.0 709
MS.gene011236.t1 AT4G26100 69.979 473 112 9 1 470 1 446 0.0 652
MS.gene011236.t1 AT5G57015 69.538 476 101 9 1 474 1 434 0.0 644
MS.gene011236.t1 AT2G19470 69.533 407 102 5 1 404 1 388 0.0 573
MS.gene011236.t1 AT1G03930 60.970 474 173 6 1 467 1 469 0.0 542
MS.gene011236.t1 AT5G44100 82.492 297 51 1 1 296 1 297 0.0 539
MS.gene011236.t1 AT5G44100 82.492 297 51 1 1 296 1 297 0.0 539
MS.gene011236.t1 AT3G23340 64.096 415 135 6 1 414 1 402 0.0 531
MS.gene011236.t1 AT4G28540 73.620 326 78 2 1 318 5 330 0.0 520
MS.gene011236.t1 AT4G14340 63.260 411 137 5 1 410 7 404 0.0 519
MS.gene011236.t1 AT5G43320 56.701 485 185 9 1 469 1 476 0.0 519
MS.gene011236.t1 AT4G14340 78.788 297 62 1 1 296 7 303 0.0 511
MS.gene011236.t1 AT1G04440 69.940 336 100 1 1 335 1 336 3.37e-179 510
MS.gene011236.t1 AT5G43320 77.104 297 67 1 1 296 1 297 3.81e-177 501
MS.gene011236.t1 AT5G43320 77.104 297 67 1 1 296 1 297 3.81e-177 501
MS.gene011236.t1 AT4G28880 66.479 355 110 3 1 354 1 347 6.23e-176 500
MS.gene011236.t1 AT4G28880 66.479 355 110 3 1 354 1 347 6.23e-176 500
MS.gene011236.t1 AT4G28880 66.479 355 110 3 1 354 1 347 6.23e-176 500
MS.gene011236.t1 AT4G28880 66.479 355 110 3 1 354 1 347 6.23e-176 500
MS.gene011236.t1 AT3G23340 63.291 395 131 6 21 414 7 388 6.02e-175 498
MS.gene011236.t1 AT4G28860 69.113 327 99 2 1 326 1 326 2.37e-172 489
MS.gene011236.t1 AT4G28860 69.113 327 99 2 1 326 1 326 1.18e-171 489
MS.gene011236.t1 AT4G08800 68.525 305 63 3 1 304 1 273 3.08e-153 437
MS.gene011236.t1 AT2G25760 39.146 281 153 6 4 266 100 380 3.72e-61 212
MS.gene011236.t1 AT2G25760 38.434 281 152 7 4 266 100 377 5.40e-58 203
MS.gene011236.t1 AT3G03940 38.408 289 159 7 4 276 133 418 4.08e-56 198
MS.gene011236.t1 AT5G18190 38.062 289 160 7 4 276 123 408 5.04e-56 198
MS.gene011236.t1 AT5G18190 38.062 289 160 7 4 276 123 408 5.04e-56 198
MS.gene011236.t1 AT3G13670 36.042 283 163 6 9 276 137 416 1.99e-54 194
MS.gene011236.t1 AT2G17890 25.893 224 150 8 7 222 106 321 7.57e-13 71.2
MS.gene011236.t1 AT3G50530 25.532 235 135 8 5 218 144 359 5.76e-12 68.6
MS.gene011236.t1 AT5G39440 29.245 212 128 10 9 212 19 216 2.50e-11 66.2
MS.gene011236.t1 AT3G06030 26.941 219 134 7 8 212 67 273 5.98e-11 65.1
MS.gene011236.t1 AT3G29160 29.577 213 127 11 9 212 20 218 6.50e-11 64.3
MS.gene011236.t1 AT4G36070 25.455 220 148 7 7 218 69 280 8.76e-11 64.7
MS.gene011236.t1 AT4G36070 25.455 220 148 7 7 218 69 280 9.28e-11 64.3
MS.gene011236.t1 AT3G01090 27.313 227 114 9 9 212 19 217 9.95e-11 64.3
MS.gene011236.t1 AT3G01090 27.313 227 114 9 9 212 19 217 9.95e-11 64.3

Find 112 sgRNAs with CRISPR-Local

Find 293 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACATCAAACATAAATAATT+TGG 0.143188 8.2:-76015865 MS.gene011236:CDS
GACAATTTCCTCATGGGTTT+AGG 0.228856 8.2:-76019158 MS.gene011236:CDS
ATTTATTCAATTTCTGTAAT+AGG 0.238085 8.2:-76019361 MS.gene011236:CDS
TTCTTCATTTGTCTGAATAT+TGG 0.261094 8.2:+76020379 None:intergenic
GGAAAAGATGGTAGGAATAT+TGG 0.271839 8.2:-76016792 MS.gene011236:CDS
AAAATTGGTAGCGGATCTTT+TGG 0.312915 8.2:-76020505 MS.gene011236:CDS
CTTGCTGCTGGACCGAGTTC+TGG 0.338183 8.2:-76017039 MS.gene011236:CDS
ACAATTTCCTCATGGGTTTA+GGG 0.340991 8.2:-76019157 MS.gene011236:CDS
GAAAAGATGGTAGGAATATT+GGG 0.370564 8.2:-76016791 MS.gene011236:CDS
ATGAATACTCATCTTGGAAT+TGG 0.372690 8.2:-76017966 MS.gene011236:intron
ACCTCAGTGACCGACAATAA+TGG 0.388781 8.2:+76017489 None:intergenic
TTTCTGCAGTCTACCTTGGC+AGG 0.394985 8.2:-76017721 MS.gene011236:intron
TATCGAGTTCGAATTTCTTT+CGG 0.396736 8.2:-76016076 MS.gene011236:CDS
CACTTACAGGGTCTTGCTGC+TGG 0.397023 8.2:-76017051 MS.gene011236:intron
CTTCATACTTCCATTATTGT+CGG 0.399001 8.2:-76017499 MS.gene011236:CDS
AATCGAAGACATAATCAAAC+TGG 0.405895 8.2:+76017216 None:intergenic
CCAAACCTTCACGGATGAAT+AGG 0.413827 8.2:+76017420 None:intergenic
GGTTTAATGGAACCTCGAAT+TGG 0.417126 8.2:-76020550 None:intergenic
ATGCCATAAAAGTACCTATA+GGG 0.418213 8.2:+76018961 None:intergenic
AATTTGGATTCAACGCTTAG+AGG 0.429713 8.2:-76015849 MS.gene011236:CDS
GCTAGTATGAATACTCATCT+TGG 0.435171 8.2:-76017972 MS.gene011236:CDS
AAGATTCCATCATTAGCAAT+AGG 0.437123 8.2:+76016729 None:intergenic
TTGGAAATAAGTTCCGTCTT+GGG 0.443286 8.2:-76020531 MS.gene011236:CDS
ACACCGGACCATTTCACATT+CGG 0.447768 8.2:+76019437 None:intergenic
CACCATAGCATCTTTAGATC+CGG 0.452993 8.2:+76016671 None:intergenic
ATACAACAATTGAGGGTGCT+TGG 0.454552 8.2:+76019613 None:intergenic
AGTTTGATTATGTCTTCGAT+TGG 0.461696 8.2:-76017214 MS.gene011236:CDS
TTTGCTTCATACAACAATTG+AGG 0.464158 8.2:+76019605 None:intergenic
TCTGGACCTATTGCTAATGA+TGG 0.466720 8.2:-76016735 MS.gene011236:CDS
TTGCTTCATACAACAATTGA+GGG 0.471529 8.2:+76019606 None:intergenic
ATCCTTGTGATGGATTTACT+TGG 0.473724 8.2:-76019398 MS.gene011236:CDS
CCACTTACAAATGACTTAAC+CGG 0.474625 8.2:-76016690 MS.gene011236:CDS
GAAAGTTTCTACATCTATTG+AGG 0.478508 8.2:-76017649 MS.gene011236:intron
CTGGAATACCGAATGTGAAA+TGG 0.479886 8.2:-76019445 MS.gene011236:CDS
GCAAATGCTGATGGACAGTC+AGG 0.482487 8.2:-76017000 MS.gene011236:intron
CCCACTCGAAGGAGAACCTC+TGG 0.486536 8.2:-76016753 MS.gene011236:CDS
CCGGTTAAGTCATTTGTAAG+TGG 0.488016 8.2:+76016690 None:intergenic
ATTGGAAATAAGTTCCGTCT+TGG 0.488327 8.2:-76020532 MS.gene011236:CDS
GAGCACAACCGAGTATCATC+TGG 0.489104 8.2:-76015894 MS.gene011236:CDS
CGGTTAAGTCATTTGTAAGT+GGG 0.492030 8.2:+76016691 None:intergenic
TCTTATGCTTGCCGATCAAA+TGG 0.495084 8.2:-76019318 MS.gene011236:intron
CTAGCTTCTGCAAATGCTGA+TGG 0.497772 8.2:-76017009 MS.gene011236:CDS
AGGGATGATTTAGAGTCGCT+TGG 0.498396 8.2:-76017846 MS.gene011236:CDS
GGTATTTCTGCAGTCTACCT+TGG 0.499822 8.2:-76017725 MS.gene011236:intron
TCGAATTTCTTTCGGTCAAG+TGG 0.500221 8.2:-76016068 MS.gene011236:CDS
CACATCAGCATATTCCCTAT+AGG 0.500725 8.2:-76018975 MS.gene011236:intron
TTTACTTGGCCCTAGTCTTG+AGG 0.502228 8.2:-76019384 MS.gene011236:CDS
CGGAACTTATTTCCAATTCG+AGG 0.504125 8.2:+76020538 None:intergenic
AGCAGCCGCGATGCAGCTGT+TGG 0.504156 8.2:-76016020 MS.gene011236:CDS
TGTTTCTTCCAGATGATACT+CGG 0.516048 8.2:+76015886 None:intergenic
AAGCCAGACAATTTCCTCAT+GGG 0.517628 8.2:-76019164 MS.gene011236:CDS
CTCACGCTGGATTCAAGTCT+AGG 0.518828 8.2:-76015969 MS.gene011236:CDS
TAGGTGTACATCATTGACTT+TGG 0.518918 8.2:-76019024 MS.gene011236:CDS
TTGAATAAATCCTCAAGACT+AGG 0.522442 8.2:+76019374 None:intergenic
CTCCTCTCGTCCTCTCACGC+TGG 0.525433 8.2:-76015982 MS.gene011236:CDS
GGAGCAGTCCGTAAAAGCTC+TGG 0.531646 8.2:-76015948 MS.gene011236:CDS
AAACCCATGAGGAAATTGTC+TGG 0.531680 8.2:+76019161 None:intergenic
AACCGGATCTAAAGATGCTA+TGG 0.540198 8.2:-76016673 MS.gene011236:intron
TGCAGCTGTTGGCAGTGAGA+CGG 0.540876 8.2:-76016009 MS.gene011236:CDS
AAAGCCAGACAATTTCCTCA+TGG 0.544831 8.2:-76019165 MS.gene011236:CDS
TGAATAAATCCTCAAGACTA+GGG 0.545896 8.2:+76019375 None:intergenic
TTCTGCAGTCTACCTTGGCA+GGG 0.547539 8.2:-76017720 MS.gene011236:intron
AAACAAGGCCCAAACCTTCA+CGG 0.553845 8.2:+76017411 None:intergenic
CAGCGTGAGAGGACGAGAGG+AGG 0.553851 8.2:+76015983 None:intergenic
CGTGACCTATTCATCCGTGA+AGG 0.553976 8.2:-76017425 MS.gene011236:intron
CAGAGAGAATAAGAATCTGA+CGG 0.555069 8.2:-76018009 MS.gene011236:CDS
AGCGTGAGAGGACGAGAGGA+GGG 0.556937 8.2:+76015984 None:intergenic
GAAGTATGAAGCAAATTCTG+AGG 0.560679 8.2:+76017511 None:intergenic
TGTGTAGGTGGTGGAAAAGA+TGG 0.562910 8.2:-76016804 MS.gene011236:intron
GTGAAATGGTCCGGTGTGGA+AGG 0.568781 8.2:-76019431 MS.gene011236:CDS
AGACTTGAATCCAGCGTGAG+AGG 0.575553 8.2:+76015972 None:intergenic
TCCAGAGGTTCTCCTTCGAG+TGG 0.576149 8.2:+76016752 None:intergenic
AAGTTCACATATCATGTCAT+CGG 0.576819 8.2:-76015916 MS.gene011236:CDS
AGAGTACAACATCCTTGTGA+TGG 0.579202 8.2:-76019408 MS.gene011236:CDS
ATCATTAGCAATAGGTCCAG+AGG 0.580010 8.2:+76016737 None:intergenic
AGGGAAACCCACCATTTGAT+CGG 0.583445 8.2:+76019307 None:intergenic
CCTTGGCAGGGATTGAAAGC+AGG 0.584404 8.2:-76017708 MS.gene011236:CDS
AGAGAGAATAAGAATCTGAC+GGG 0.585309 8.2:-76018008 MS.gene011236:CDS
CTTTAATAGAGCAAAGCCGT+AGG 0.589565 8.2:-76017866 MS.gene011236:intron
CTTTGCTAGTCTCTCTGTCG+TGG 0.590086 8.2:-76017539 MS.gene011236:intron
ATACCGAATGTGAAATGGTC+CGG 0.593452 8.2:-76019440 MS.gene011236:CDS
ACCATCACTTACAATACCAC+GGG 0.602147 8.2:+76017148 None:intergenic
TTTAATAGAGCAAAGCCGTA+GGG 0.604857 8.2:-76017865 MS.gene011236:intron
CACCATCACTTACAATACCA+CGG 0.605886 8.2:+76017147 None:intergenic
GGTTAAGTCATTTGTAAGTG+GGG 0.606360 8.2:+76016692 None:intergenic
GTCTGCATTTAAACGATGAG+AGG 0.609688 8.2:-76015818 MS.gene011236:CDS
CTTCGTCTGATCCCACTCGA+AGG 0.610986 8.2:-76016764 MS.gene011236:CDS
AAGCTGTATAAAATACTGCA+AGG 0.612393 8.2:-76019584 MS.gene011236:CDS
ATCGCCACTCCTCCTTCCCG+TGG 0.613928 8.2:-76017164 MS.gene011236:CDS
CCTGCTTTCAATCCCTGCCA+AGG 0.616580 8.2:+76017708 None:intergenic
CCAGAGGTTCTCCTTCGAGT+GGG 0.619887 8.2:+76016753 None:intergenic
ATCCAGCGTGAGAGGACGAG+AGG 0.620493 8.2:+76015980 None:intergenic
TCCATTATTGTCGGTCACTG+AGG 0.621842 8.2:-76017490 MS.gene011236:CDS
TTCGGTCAAGTGGATCTGCA+AGG 0.626728 8.2:-76016058 MS.gene011236:CDS
ATTTCCTCATGGGTTTAGGG+AGG 0.628140 8.2:-76019154 MS.gene011236:CDS
CTTACAATACCACGGGAAGG+AGG 0.631667 8.2:+76017155 None:intergenic
AATACCACGGGAAGGAGGAG+TGG 0.634617 8.2:+76017160 None:intergenic
TCTGCATTTAAACGATGAGA+GGG 0.635819 8.2:-76015817 MS.gene011236:CDS
AAGTATGAAGCAAATTCTGA+GGG 0.637275 8.2:+76017512 None:intergenic
GCGACTCTAAATCATCCCTA+CGG 0.637624 8.2:+76017850 None:intergenic
TCAAGTGGATCTGCAAGGCG+AGG 0.638769 8.2:-76016053 MS.gene011236:CDS
TCAGCATTTGCAGAAGCTAG+CGG 0.639218 8.2:+76017012 None:intergenic
TAGGTGGTGGAAAAGATGGT+AGG 0.644820 8.2:-76016800 MS.gene011236:CDS
GCTAGCGGCAGACCAGAACT+CGG 0.647842 8.2:+76017027 None:intergenic
GTTGTACTCTCCTTCCACAC+CGG 0.649985 8.2:+76019421 None:intergenic
GGCCAAGTAAATCCATCACA+AGG 0.666479 8.2:+76019396 None:intergenic
TCACTTACAATACCACGGGA+AGG 0.675431 8.2:+76017152 None:intergenic
CACTGCCAACAGCTGCATCG+CGG 0.679863 8.2:+76016015 None:intergenic
GAATGTGAAATGGTCCGGTG+TGG 0.716403 8.2:-76019435 MS.gene011236:CDS
CACGCCTCCCTAAACCCATG+AGG 0.721724 8.2:+76019150 None:intergenic
AAGATGGTAGGAATATTGGG+TGG 0.729848 8.2:-76016788 MS.gene011236:CDS
CTGTATAAAATACTGCAAGG+AGG 0.737729 8.2:-76019581 MS.gene011236:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCCAAAAATAAAATATAAAT+AGG + chr8.2:76018966-76018985 None:intergenic 10.0%
!!! TCAATATTTATTTGAAATAT+TGG - chr8.2:76019850-76019869 MS.gene011236:intron 10.0%
!!! TCCTATTTATATTTTATTTT+TGG - chr8.2:76018962-76018981 MS.gene011236:intron 10.0%
!! AAAAACTAATTGATACTTAA+TGG + chr8.2:76018026-76018045 None:intergenic 15.0%
!! AAAATATAAATAGGAAAACA+AGG + chr8.2:76018957-76018976 None:intergenic 15.0%
!! AAATAAAGTAATGATTGATT+AGG - chr8.2:76016438-76016457 MS.gene011236:intron 15.0%
!! ATTTATTCAATTTCTGTAAT+AGG - chr8.2:76016989-76017008 MS.gene011236:intron 15.0%
!! GATTACCAAAATAATATTAA+AGG + chr8.2:76017905-76017924 None:intergenic 15.0%
!! GTGAATAAAAAGTTATTAAA+AGG - chr8.2:76018120-76018139 MS.gene011236:intron 15.0%
!!! AAAAAATTAAAGTTTTGTCT+TGG - chr8.2:76019924-76019943 MS.gene011236:intron 15.0%
!!! AATGATTTTAAAAGACATAA+TGG + chr8.2:76018773-76018792 None:intergenic 15.0%
!!! TCATTTTCTTTTTCAAAATT+CGG + chr8.2:76016020-76016039 None:intergenic 15.0%
!!! TGAATCCTTTAATATTATTT+TGG - chr8.2:76017897-76017916 MS.gene011236:intron 15.0%
!!! TTAAGTTATTCAATTTTTAG+TGG - chr8.2:76019262-76019281 MS.gene011236:intron 15.0%
!!! TTTTGTAAAATCTATTATCA+TGG - chr8.2:76017499-76017518 MS.gene011236:CDS 15.0%
!!! TTTTTATTCTTTTGAGTTTT+TGG - chr8.2:76016054-76016073 MS.gene011236:CDS 15.0%
!! AATAAATAATCGTAAAGACT+AGG + chr8.2:76018223-76018242 None:intergenic 20.0%
!! AGTTATTATGTTTGTAAGTA+TGG + chr8.2:76017843-76017862 None:intergenic 20.0%
!! CACATCAAACATAAATAATT+TGG - chr8.2:76020485-76020504 MS.gene011236:intron 20.0%
!! GAATTTATGCCAATTAAATT+TGG - chr8.2:76018144-76018163 MS.gene011236:intron 20.0%
!! TAAATTTACGAACTGATATT+TGG - chr8.2:76016518-76016537 MS.gene011236:intron 20.0%
!! TAACAAATGAAAATCATTCA+AGG + chr8.2:76019499-76019518 None:intergenic 20.0%
!! TGTCAAATGCTAAATAATAA+AGG + chr8.2:76018575-76018594 None:intergenic 20.0%
!! TTGATTGTATACCTATTATA+TGG + chr8.2:76017958-76017977 None:intergenic 20.0%
!! TTGTATAAACTTAATCAGAA+GGG + chr8.2:76020176-76020195 None:intergenic 20.0%
!!! ATTTTTGTTTTGTTTGATTC+AGG - chr8.2:76016702-76016721 MS.gene011236:CDS 20.0%
!!! CAAAACTTTAATTTTTTCCT+TGG + chr8.2:76019921-76019940 None:intergenic 20.0%
!!! CATTTGACATATCTTTTAAT+TGG - chr8.2:76018586-76018605 MS.gene011236:intron 20.0%
!!! CATTTTCTTTTTCAAAATTC+GGG + chr8.2:76016019-76016038 None:intergenic 20.0%
!!! GTTCTTATGTATTTTTTAAG+AGG - chr8.2:76018531-76018550 MS.gene011236:intron 20.0%
!!! TAATTTTTTCCTTGGATAAA+GGG + chr8.2:76019913-76019932 None:intergenic 20.0%
!!! TCAATAACAACAAAAGTATT+CGG + chr8.2:76016092-76016111 None:intergenic 20.0%
!!! TTAAAATCATTGTTGATTGT+GGG - chr8.2:76018782-76018801 MS.gene011236:intron 20.0%
!!! TTAATTTTTTCCTTGGATAA+AGG + chr8.2:76019914-76019933 None:intergenic 20.0%
!!! TTATGTATTTTTTAAGAGGA+AGG - chr8.2:76018535-76018554 MS.gene011236:intron 20.0%
!!! TTTAAAATCATTGTTGATTG+TGG - chr8.2:76018781-76018800 MS.gene011236:intron 20.0%
!!! TTTTGTTGTTGTGAATTTTA+GGG - chr8.2:76015920-76015939 MS.gene011236:CDS 20.0%
!!! TTTTTGTTGTTGTGAATTTT+AGG - chr8.2:76015919-76015938 MS.gene011236:CDS 20.0%
!!! TTTTTTCTTTGTCATAGTTT+AGG - chr8.2:76019049-76019068 MS.gene011236:intron 20.0%
! AAAGAGAAGTTAAAACAACA+AGG + chr8.2:76019379-76019398 None:intergenic 25.0%
! AAATCAATGGCTATTAAGAA+AGG + chr8.2:76018440-76018459 None:intergenic 25.0%
! AATACACAAATTCACTAAGT+TGG + chr8.2:76016805-76016824 None:intergenic 25.0%
! AATCAATGGCTATTAAGAAA+GGG + chr8.2:76018439-76018458 None:intergenic 25.0%
! AATTTGGACATCCATATAAT+AGG - chr8.2:76017944-76017963 MS.gene011236:intron 25.0%
! ATACACAAATTCACTAAGTT+GGG + chr8.2:76016804-76016823 None:intergenic 25.0%
! ATCACAAAAATGCAAGAAAT+TGG + chr8.2:76015898-76015917 None:intergenic 25.0%
! ATTGGATACTCTTTCTTATT+TGG - chr8.2:76018604-76018623 MS.gene011236:intron 25.0%
! CCAATGAAACCAAATTTAAT+TGG + chr8.2:76018156-76018175 None:intergenic 25.0%
! CTTCTGATTAAGTTTATACA+AGG - chr8.2:76020175-76020194 MS.gene011236:intron 25.0%
! CTTGTATAAACTTAATCAGA+AGG + chr8.2:76020177-76020196 None:intergenic 25.0%
! GCTATCATGAATTATTTATG+TGG - chr8.2:76017552-76017571 MS.gene011236:intron 25.0%
! TACAAGGTTATCTGTTTATA+TGG - chr8.2:76020191-76020210 MS.gene011236:intron 25.0%
! TAGACTTCATATTACTTACT+TGG - chr8.2:76016845-76016864 MS.gene011236:intron 25.0%
! TATAACTTCAAATACCAAAC+CGG + chr8.2:76016476-76016495 None:intergenic 25.0%
! TATGATAACTATACAACACA+CGG + chr8.2:76020144-76020163 None:intergenic 25.0%
! TATGGGATATTGAATTTCAT+TGG - chr8.2:76016258-76016277 MS.gene011236:intron 25.0%
! TCAGTTAAGTTAATGATTAC+TGG - chr8.2:76016411-76016430 MS.gene011236:intron 25.0%
! TCCAACATCATATATGATTA+AGG - chr8.2:76019824-76019843 MS.gene011236:intron 25.0%
! TCCTTAATCATATATGATGT+TGG + chr8.2:76019828-76019847 None:intergenic 25.0%
! TTAGAAACCAACAAAAGAAA+TGG + chr8.2:76019956-76019975 None:intergenic 25.0%
! TTATTGAAGTTTGATGAGAA+GGG - chr8.2:76016105-76016124 MS.gene011236:intron 25.0%
! TTCTTCATTTGTCTGAATAT+TGG + chr8.2:76015974-76015993 None:intergenic 25.0%
! TTGAGACATTATAAGAAAAC+TGG + chr8.2:76017098-76017117 None:intergenic 25.0%
!! ACAAAATAAGAAAGCATGAT+AGG + chr8.2:76017485-76017504 None:intergenic 25.0%
!! CAAAATAAGAAAGCATGATA+GGG + chr8.2:76017484-76017503 None:intergenic 25.0%
!! CCAATTAAATTTGGTTTCAT+TGG - chr8.2:76018153-76018172 MS.gene011236:intron 25.0%
!! CTTAGTGAATTTGTGTATTT+TGG - chr8.2:76016806-76016825 MS.gene011236:intron 25.0%
!! TTTGAAACAAAGAGTTGTAT+AGG - chr8.2:76016232-76016251 MS.gene011236:intron 25.0%
!! TTTTCAGTGATGAATTGAAA+GGG - chr8.2:76016155-76016174 MS.gene011236:intron 25.0%
!! TTTTCTGATTTTATTCAGCA+TGG - chr8.2:76017418-76017437 MS.gene011236:intron 25.0%
!!! ATACCAAGTCATTTTTACAT+CGG - chr8.2:76017157-76017176 MS.gene011236:intron 25.0%
!!! CATTTTCAGGTAAAAATCAA+TGG + chr8.2:76018453-76018472 None:intergenic 25.0%
!!! TGGCTTAAATGTTTTTTGTT+GGG - chr8.2:76016865-76016884 MS.gene011236:intron 25.0%
!!! TTAATTTGTGTTTTTGTTGC+AGG - chr8.2:76015946-76015965 MS.gene011236:CDS 25.0%
!!! TTGGCTTAAATGTTTTTTGT+TGG - chr8.2:76016864-76016883 MS.gene011236:intron 25.0%
AAAGAGTTGTATAGGCAATA+TGG - chr8.2:76016240-76016259 MS.gene011236:intron 30.0%
AAGAAAATAGAATCAATGCC+AGG + chr8.2:76017706-76017725 None:intergenic 30.0%
AAGAGTTGTATAGGCAATAT+GGG - chr8.2:76016241-76016260 MS.gene011236:intron 30.0%
AAGATTCCATCATTAGCAAT+AGG + chr8.2:76019624-76019643 None:intergenic 30.0%
AAGCTGTATAAAATACTGCA+AGG - chr8.2:76016766-76016785 MS.gene011236:CDS 30.0%
AAGTATGAAGCAAATTCTGA+GGG + chr8.2:76018841-76018860 None:intergenic 30.0%
AAGTTCACATATCATGTCAT+CGG - chr8.2:76020434-76020453 MS.gene011236:intron 30.0%
AATCATATATGATGTTGGAC+AGG + chr8.2:76019823-76019842 None:intergenic 30.0%
AATCGAAGACATAATCAAAC+TGG + chr8.2:76019137-76019156 None:intergenic 30.0%
AATGGATCTTAGTTCAAACA+AGG + chr8.2:76017816-76017835 None:intergenic 30.0%
AATTGATACATAACAAGCGT+TGG + chr8.2:76017288-76017307 None:intergenic 30.0%
ACCATTAAACTCAGTAGTAT+GGG + chr8.2:76020066-76020085 None:intergenic 30.0%
AGGTAATTAGATGATTGATC+AGG - chr8.2:76016353-76016372 MS.gene011236:intron 30.0%
AGTTTGATTATGTCTTCGAT+TGG - chr8.2:76019136-76019155 MS.gene011236:intron 30.0%
ATAACTTATGTTGCTGTAAG+TGG - chr8.2:76018261-76018280 MS.gene011236:intron 30.0%
ATCATGGAAAATCCTATATC+TGG - chr8.2:76017515-76017534 MS.gene011236:CDS 30.0%
ATGAATACTCATCTTGGAAT+TGG - chr8.2:76018384-76018403 MS.gene011236:intron 30.0%
ATGATAGGGAATATATCGAT+GGG + chr8.2:76017470-76017489 None:intergenic 30.0%
ATTACAAGCTTATGCAATAC+AGG + chr8.2:76017066-76017085 None:intergenic 30.0%
CTTCATACTTCCATTATTGT+CGG - chr8.2:76018851-76018870 MS.gene011236:intron 30.0%
GAAAAGATGGTAGGAATATT+GGG - chr8.2:76019559-76019578 MS.gene011236:intron 30.0%
GAAAGTTTCTACATCTATTG+AGG - chr8.2:76018701-76018720 MS.gene011236:intron 30.0%
GAGTTTAATGGTGTGAATAT+TGG - chr8.2:76020074-76020093 MS.gene011236:intron 30.0%
GATTACTACTATTTAGTAGG+AGG - chr8.2:76017581-76017600 MS.gene011236:intron 30.0%
GCTGATTACTACTATTTAGT+AGG - chr8.2:76017578-76017597 MS.gene011236:intron 30.0%
GTTATTGAAGTTTGATGAGA+AGG - chr8.2:76016104-76016123 MS.gene011236:intron 30.0%
TAATCGATACTTCGATTACA+AGG + chr8.2:76016326-76016345 None:intergenic 30.0%
TACATCTATTGAGGTATGAT+TGG - chr8.2:76018710-76018729 MS.gene011236:intron 30.0%
TATCGAGTTCGAATTTCTTT+CGG - chr8.2:76020274-76020293 MS.gene011236:intron 30.0%
TATTGAAGTTTGATGAGAAG+GGG - chr8.2:76016106-76016125 MS.gene011236:intron 30.0%
TGAATAAATCCTCAAGACTA+GGG + chr8.2:76016978-76016997 None:intergenic 30.0%
TGATTAACCAAGTCTGATTA+TGG + chr8.2:76016394-76016413 None:intergenic 30.0%
TTACAAGCTTATGCAATACA+GGG + chr8.2:76017065-76017084 None:intergenic 30.0%
TTCATATTTGCCTCTTATGT+AGG - chr8.2:76017307-76017326 MS.gene011236:intron 30.0%
TTGAATAAATCCTCAAGACT+AGG + chr8.2:76016979-76016998 None:intergenic 30.0%
TTGCTTCATACAACAATTGA+GGG + chr8.2:76016747-76016766 None:intergenic 30.0%
TTTCAGTGATGAATTGAAAG+GGG - chr8.2:76016156-76016175 MS.gene011236:intron 30.0%
TTTGCTTCATACAACAATTG+AGG + chr8.2:76016748-76016767 None:intergenic 30.0%
! AAAATCCTATATCTGGAATC+TGG - chr8.2:76017522-76017541 MS.gene011236:CDS 30.0%
! AACCTAAACTATGGTTTTCA+AGG + chr8.2:76019004-76019023 None:intergenic 30.0%
! AGCAAAAAACTCACATTTTC+AGG + chr8.2:76018466-76018485 None:intergenic 30.0%
! ATGGTGCGTGTTTTATATAT+GGG - chr8.2:76019696-76019715 MS.gene011236:intron 30.0%
! ATTCCCTATAGGTACTTTTA+TGG - chr8.2:76017386-76017405 MS.gene011236:intron 30.0%
! CTTTTCAGATAAGCATAATC+TGG + chr8.2:76018898-76018917 None:intergenic 30.0%
! GTTTTCAGTGATGAATTGAA+AGG - chr8.2:76016154-76016173 MS.gene011236:intron 30.0%
! TATGGTGCGTGTTTTATATA+TGG - chr8.2:76019695-76019714 MS.gene011236:intron 30.0%
! TTTGTTGGGTTTCTTTTCTT+TGG - chr8.2:76016879-76016898 MS.gene011236:intron 30.0%
!! ATGCCATAAAAGTACCTATA+GGG + chr8.2:76017392-76017411 None:intergenic 30.0%
!! TCATAGTTTAGGTTCTAGAT+GGG - chr8.2:76019060-76019079 MS.gene011236:intron 30.0%
!! TCTTTTGGAGAGATCTATTT+AGG - chr8.2:76015860-76015879 MS.gene011236:CDS 30.0%
!!! TACCAAGTCATTTTTACATC+GGG - chr8.2:76017158-76017177 MS.gene011236:intron 30.0%
!!! TACCAGTGCATTTTTTAATG+TGG - chr8.2:76019517-76019536 MS.gene011236:intron 30.0%
AACATCCAGATTCCAGATAT+AGG + chr8.2:76017530-76017549 None:intergenic 35.0%
AATTTGGATTCAACGCTTAG+AGG - chr8.2:76020501-76020520 MS.gene011236:CDS 35.0%
ACAATTTCCTCATGGGTTTA+GGG - chr8.2:76017193-76017212 MS.gene011236:CDS 35.0%
ACATAATCAAACTGGAATCC+TGG + chr8.2:76019129-76019148 None:intergenic 35.0%
ACCCATACTACTGAGTTTAA+TGG - chr8.2:76020062-76020081 MS.gene011236:intron 35.0%
AGAGAGAATAAGAATCTGAC+GGG - chr8.2:76018342-76018361 MS.gene011236:intron 35.0%
AGATTCTTATTCTCTCTGCA+AGG + chr8.2:76018339-76018358 None:intergenic 35.0%
AGGCAAATAACTTAACGAAC+TGG + chr8.2:76017775-76017794 None:intergenic 35.0%
ATGATGTACACCTACATAAG+AGG + chr8.2:76017320-76017339 None:intergenic 35.0%
ATTGGAAATAAGTTCCGTCT+TGG - chr8.2:76015818-76015837 MS.gene011236:CDS 35.0%
CACCACATTAAAAAATGCAC+TGG + chr8.2:76019522-76019541 None:intergenic 35.0%
CACCATTAAACTCAGTAGTA+TGG + chr8.2:76020067-76020086 None:intergenic 35.0%
CAGAGAGAATAAGAATCTGA+CGG - chr8.2:76018341-76018360 MS.gene011236:intron 35.0%
CATGATAGGGAATATATCGA+TGG + chr8.2:76017471-76017490 None:intergenic 35.0%
CCACTTACAAATGACTTAAC+CGG - chr8.2:76019660-76019679 MS.gene011236:intron 35.0%
CGGTTAAGTCATTTGTAAGT+GGG + chr8.2:76019662-76019681 None:intergenic 35.0%
CGTACTGTGCAAGTTAATAT+TGG - chr8.2:76020097-76020116 MS.gene011236:intron 35.0%
CTGTATAAAATACTGCAAGG+AGG - chr8.2:76016769-76016788 MS.gene011236:CDS 35.0%
GAAGTATGAAGCAAATTCTG+AGG + chr8.2:76018842-76018861 None:intergenic 35.0%
GATTCTTATTCTCTCTGCAA+GGG + chr8.2:76018338-76018357 None:intergenic 35.0%
GCTAGTATGAATACTCATCT+TGG - chr8.2:76018378-76018397 MS.gene011236:intron 35.0%
GGAAAAGATGGTAGGAATAT+TGG - chr8.2:76019558-76019577 MS.gene011236:intron 35.0%
GGCTAACAAAACTATCATCA+AGG + chr8.2:76017795-76017814 None:intergenic 35.0%
GGTTAAGTCATTTGTAAGTG+GGG + chr8.2:76019661-76019680 None:intergenic 35.0%
GTAATCACCATAATCAGACT+TGG - chr8.2:76016384-76016403 MS.gene011236:intron 35.0%
GTCCTTGAAAACCATAGTTT+AGG - chr8.2:76018999-76019018 MS.gene011236:CDS 35.0%
GTTTGTAAGTATGGCATCAA+TGG + chr8.2:76017834-76017853 None:intergenic 35.0%
TCTGCATTTAAACGATGAGA+GGG - chr8.2:76020533-76020552 MS.gene011236:CDS 35.0%
TGATAGGGAATATATCGATG+GGG + chr8.2:76017469-76017488 None:intergenic 35.0%
TGTTTCTTCCAGATGATACT+CGG + chr8.2:76020467-76020486 None:intergenic 35.0%
TTGGAAATAAGTTCCGTCTT+GGG - chr8.2:76015819-76015838 MS.gene011236:CDS 35.0%
TTTAATAGAGCAAAGCCGTA+GGG - chr8.2:76018485-76018504 MS.gene011236:intron 35.0%
! AACTAATTTTGAGCTTTGCG+CGG - chr8.2:76017658-76017677 MS.gene011236:CDS 35.0%
! GATTAGGTGATGTTGATTAC+CGG - chr8.2:76016454-76016473 MS.gene011236:intron 35.0%
! GTGCATTCCATTTCTTTTGT+TGG - chr8.2:76019946-76019965 MS.gene011236:intron 35.0%
! GTTGGTTTCTAAATGTAAGC+AGG - chr8.2:76019964-76019983 MS.gene011236:intron 35.0%
! TACCAATTTTTCTCCCAAGA+CGG + chr8.2:76015835-76015854 None:intergenic 35.0%
!! ACCATAGTTTAGGTTCTAGA+TGG - chr8.2:76019009-76019028 MS.gene011236:CDS 35.0%
!! ATCCTTGTGATGGATTTACT+TGG - chr8.2:76016952-76016971 MS.gene011236:intron 35.0%
!! CCATAGTTTAGGTTCTAGAT+GGG - chr8.2:76019010-76019029 MS.gene011236:CDS 35.0%
!! GATGCCATAAAAGTACCTAT+AGG + chr8.2:76017393-76017412 None:intergenic 35.0%
!! GTCATAGTTTAGGTTCTAGA+TGG - chr8.2:76019059-76019078 MS.gene011236:intron 35.0%
!! TAGGTGTACATCATTGACTT+TGG - chr8.2:76017326-76017345 MS.gene011236:intron 35.0%
!!! AAAATTGGTAGCGGATCTTT+TGG - chr8.2:76015845-76015864 MS.gene011236:CDS 35.0%
AAACCCATGAGGAAATTGTC+TGG + chr8.2:76017192-76017211 None:intergenic 40.0%
AAAGCCAGACAATTTCCTCA+TGG - chr8.2:76017185-76017204 MS.gene011236:CDS 40.0%
AACCGGATCTAAAGATGCTA+TGG - chr8.2:76019677-76019696 MS.gene011236:intron 40.0%
AAGATGGTAGGAATATTGGG+TGG - chr8.2:76019562-76019581 MS.gene011236:intron 40.0%
AAGCCAGACAATTTCCTCAT+GGG - chr8.2:76017186-76017205 MS.gene011236:CDS 40.0%
ACCATCACTTACAATACCAC+GGG + chr8.2:76019205-76019224 None:intergenic 40.0%
ACTGGTGTAACAATCATGCA+AGG + chr8.2:76017757-76017776 None:intergenic 40.0%
AGAGTACAACATCCTTGTGA+TGG - chr8.2:76016942-76016961 MS.gene011236:intron 40.0%
AGTGACAATGTGACACTTAC+AGG - chr8.2:76019286-76019305 MS.gene011236:intron 40.0%
ATACCGAATGTGAAATGGTC+CGG - chr8.2:76016910-76016929 MS.gene011236:intron 40.0%
ATCATTAGCAATAGGTCCAG+AGG + chr8.2:76019616-76019635 None:intergenic 40.0%
CACATCAGCATATTCCCTAT+AGG - chr8.2:76017375-76017394 MS.gene011236:intron 40.0%
CACCATAGCATCTTTAGATC+CGG + chr8.2:76019682-76019701 None:intergenic 40.0%
CACCATCACTTACAATACCA+CGG + chr8.2:76019206-76019225 None:intergenic 40.0%
CCGGTTAAGTCATTTGTAAG+TGG + chr8.2:76019663-76019682 None:intergenic 40.0%
CGGAACTTATTTCCAATTCG+AGG + chr8.2:76015815-76015834 None:intergenic 40.0%
CTATTCATCCGTGAAGGTTT+GGG - chr8.2:76018931-76018950 MS.gene011236:intron 40.0%
CTGGAATACCGAATGTGAAA+TGG - chr8.2:76016905-76016924 MS.gene011236:intron 40.0%
CTTGCAGAAGTCAAAGATGA+TGG - chr8.2:76019749-76019768 MS.gene011236:intron 40.0%
CTTGGGAGAAAAATTGGTAG+CGG - chr8.2:76015836-76015855 MS.gene011236:CDS 40.0%
CTTTAATAGAGCAAAGCCGT+AGG - chr8.2:76018484-76018503 MS.gene011236:intron 40.0%
GACAATTTCCTCATGGGTTT+AGG - chr8.2:76017192-76017211 MS.gene011236:CDS 40.0%
GACTGTTTACCCTTTATCCA+AGG - chr8.2:76019901-76019920 MS.gene011236:intron 40.0%
GGATGAGTCAGATGACAAAA+AGG + chr8.2:76019478-76019497 None:intergenic 40.0%
GTCCCGATGTAAAAATGACT+TGG + chr8.2:76017163-76017182 None:intergenic 40.0%
GTCTGCATTTAAACGATGAG+AGG - chr8.2:76020532-76020551 MS.gene011236:CDS 40.0%
GTGACAATGTGACACTTACA+GGG - chr8.2:76019287-76019306 MS.gene011236:intron 40.0%
TATGTTGCTGTAAGTGGTCA+AGG - chr8.2:76018267-76018286 MS.gene011236:intron 40.0%
TCGAATTTCTTTCGGTCAAG+TGG - chr8.2:76020282-76020301 MS.gene011236:intron 40.0%
TCTGGACCTATTGCTAATGA+TGG - chr8.2:76019615-76019634 MS.gene011236:CDS 40.0%
TCTTATGCTTGCCGATCAAA+TGG - chr8.2:76017032-76017051 MS.gene011236:CDS 40.0%
TTCCGTCTTGGGAGAAAAAT+TGG - chr8.2:76015830-76015849 MS.gene011236:CDS 40.0%
! ACTAATTTTGAGCTTTGCGC+GGG - chr8.2:76017659-76017678 MS.gene011236:CDS 40.0%
! CCCATCTAGAACCTAAACTA+TGG + chr8.2:76019013-76019032 None:intergenic 40.0%
! GATGATTGATCAGGTTAGTC+AGG - chr8.2:76016362-76016381 MS.gene011236:intron 40.0%
!! ATACAACAATTGAGGGTGCT+TGG + chr8.2:76016740-76016759 None:intergenic 40.0%
!! GAAGTATCGATTACAGACGT+AGG - chr8.2:76016333-76016352 MS.gene011236:intron 40.0%
!! GGTTTCTTTTCTTTGGAAGC+TGG - chr8.2:76016886-76016905 MS.gene011236:intron 40.0%
AAACAAGGCCCAAACCTTCA+CGG + chr8.2:76018942-76018961 None:intergenic 45.0%
AATGCCAGGAATGCAAAACC+AGG + chr8.2:76017692-76017711 None:intergenic 45.0%
ACACCGGACCATTTCACATT+CGG + chr8.2:76016916-76016935 None:intergenic 45.0%
ACCTCAGTGACCGACAATAA+TGG + chr8.2:76018864-76018883 None:intergenic 45.0%
AGGGAAACCCACCATTTGAT+CGG + chr8.2:76017046-76017065 None:intergenic 45.0%
ATATTACACACCCCAGAGAG+AGG + chr8.2:76018193-76018212 None:intergenic 45.0%
ATCTTACATTCCCCTTCTCC+GGG - chr8.2:76020025-76020044 MS.gene011236:intron 45.0%
ATGCTTGCCGATCAAATGGT+GGG - chr8.2:76017036-76017055 MS.gene011236:CDS 45.0%
ATTTCCTCATGGGTTTAGGG+AGG - chr8.2:76017196-76017215 MS.gene011236:CDS 45.0%
CATCTTACATTCCCCTTCTC+CGG - chr8.2:76020024-76020043 MS.gene011236:intron 45.0%
CCAAACCTTCACGGATGAAT+AGG + chr8.2:76018933-76018952 None:intergenic 45.0%
CCTATTCATCCGTGAAGGTT+TGG - chr8.2:76018930-76018949 MS.gene011236:intron 45.0%
CTAGCTTCTGCAAATGCTGA+TGG - chr8.2:76019341-76019360 MS.gene011236:CDS 45.0%
GCGACTCTAAATCATCCCTA+CGG + chr8.2:76018503-76018522 None:intergenic 45.0%
GGCCAAGTAAATCCATCACA+AGG + chr8.2:76016957-76016976 None:intergenic 45.0%
TATGCTTGCCGATCAAATGG+TGG - chr8.2:76017035-76017054 MS.gene011236:CDS 45.0%
TATTACACACCCCAGAGAGA+GGG + chr8.2:76018192-76018211 None:intergenic 45.0%
TCACTTACAATACCACGGGA+AGG + chr8.2:76019201-76019220 None:intergenic 45.0%
TCAGCATTTGCAGAAGCTAG+CGG + chr8.2:76019341-76019360 None:intergenic 45.0%
TCCATTATTGTCGGTCACTG+AGG - chr8.2:76018860-76018879 MS.gene011236:intron 45.0%
TCCCGTGGTATTGTAAGTGA+TGG - chr8.2:76019201-76019220 MS.gene011236:CDS 45.0%
TGCTGTCTCATTACGTTAGC+TGG - chr8.2:76019226-76019245 MS.gene011236:intron 45.0%
TTAATGTGGTGCCTCTGTGT+AGG - chr8.2:76019531-76019550 MS.gene011236:intron 45.0%
! AGGGATGATTTAGAGTCGCT+TGG - chr8.2:76018504-76018523 MS.gene011236:intron 45.0%
! CTAATTTTGAGCTTTGCGCG+GGG - chr8.2:76017660-76017679 MS.gene011236:CDS 45.0%
! GGTATTTCTGCAGTCTACCT+TGG - chr8.2:76018625-76018644 MS.gene011236:intron 45.0%
! GGTGATGTTGATTACCGGTT+TGG - chr8.2:76016459-76016478 MS.gene011236:intron 45.0%
! TCTGAGCACCAGAGCTTTTA+CGG + chr8.2:76020413-76020432 None:intergenic 45.0%
!! TAGGTGGTGGAAAAGATGGT+AGG - chr8.2:76019550-76019569 MS.gene011236:intron 45.0%
!! TGTGTAGGTGGTGGAAAAGA+TGG - chr8.2:76019546-76019565 MS.gene011236:intron 45.0%
!! TTTACTTGGCCCTAGTCTTG+AGG - chr8.2:76016966-76016985 MS.gene011236:intron 45.0%
!!! CTTTCCTGGTTTTGCATTCC+TGG - chr8.2:76017685-76017704 MS.gene011236:CDS 45.0%
!!! TATAATTTTTTTAGATAATT+TGG - chr8.2:76017928-76017947 MS.gene011236:intron 5.0%
AACTCAGTAGTATGGGTCCG+TGG + chr8.2:76020059-76020078 None:intergenic 50.0%
ACTGGAATCCTGGAGCAACA+AGG + chr8.2:76019119-76019138 None:intergenic 50.0%
AGACTTGAATCCAGCGTGAG+AGG + chr8.2:76020381-76020400 None:intergenic 50.0%
CGTGACCTATTCATCCGTGA+AGG - chr8.2:76018925-76018944 MS.gene011236:intron 50.0%
CTCACGCTGGATTCAAGTCT+AGG - chr8.2:76020381-76020400 MS.gene011236:CDS 50.0%
CTTACAATACCACGGGAAGG+AGG + chr8.2:76019198-76019217 None:intergenic 50.0%
GAATGTGAAATGGTCCGGTG+TGG - chr8.2:76016915-76016934 MS.gene011236:intron 50.0%
GAGCACAACCGAGTATCATC+TGG - chr8.2:76020456-76020475 MS.gene011236:intron 50.0%
GTTGTACTCTCCTTCCACAC+CGG + chr8.2:76016932-76016951 None:intergenic 50.0%
TTCGGTCAAGTGGATCTGCA+AGG - chr8.2:76020292-76020311 MS.gene011236:intron 50.0%
TTCTGCAGTCTACCTTGGCA+GGG - chr8.2:76018630-76018649 MS.gene011236:intron 50.0%
TTTCTGCAGTCTACCTTGGC+AGG - chr8.2:76018629-76018648 MS.gene011236:intron 50.0%
! CTTTGCTAGTCTCTCTGTCG+TGG - chr8.2:76018811-76018830 MS.gene011236:intron 50.0%
! CTTTTCCACCACCTACACAG+AGG + chr8.2:76019545-76019564 None:intergenic 50.0%
! GCAAATGCTGATGGACAGTC+AGG - chr8.2:76019350-76019369 MS.gene011236:CDS 50.0%
! TGTTCTTGCCTTGTTGCTCC+AGG - chr8.2:76019108-76019127 MS.gene011236:intron 50.0%
AATACCACGGGAAGGAGGAG+TGG + chr8.2:76019193-76019212 None:intergenic 55.0%
ATGTGGTGCCTCTGTGTAGG+TGG - chr8.2:76019534-76019553 MS.gene011236:intron 55.0%
CACTTACAGGGTCTTGCTGC+TGG - chr8.2:76019299-76019318 MS.gene011236:intron 55.0%
CCAGAGGTTCTCCTTCGAGT+GGG + chr8.2:76019600-76019619 None:intergenic 55.0%
CCTGCTTTCAATCCCTGCCA+AGG + chr8.2:76018645-76018664 None:intergenic 55.0%
CCTTGGCAGGGATTGAAAGC+AGG - chr8.2:76018642-76018661 MS.gene011236:intron 55.0%
CTTCGTCTGATCCCACTCGA+AGG - chr8.2:76019586-76019605 MS.gene011236:CDS 55.0%
GGAGCAGTCCGTAAAAGCTC+TGG - chr8.2:76020402-76020421 MS.gene011236:intron 55.0%
GTGAAATGGTCCGGTGTGGA+AGG - chr8.2:76016919-76016938 MS.gene011236:intron 55.0%
TCAAGTGGATCTGCAAGGCG+AGG - chr8.2:76020297-76020316 MS.gene011236:intron 55.0%
TCCAGAGGTTCTCCTTCGAG+TGG + chr8.2:76019601-76019620 None:intergenic 55.0%
TGCAGCTGTTGGCAGTGAGA+CGG - chr8.2:76020341-76020360 MS.gene011236:intron 55.0%
TGGAAGTGAAGCCCGGAGAA+GGG + chr8.2:76020039-76020058 None:intergenic 55.0%
TTCTCCGGGCTTCACTTCCA+CGG - chr8.2:76020039-76020058 MS.gene011236:intron 55.0%
AGCGTGAGAGGACGAGAGGA+GGG + chr8.2:76020369-76020388 None:intergenic 60.0%
ATCCAGCGTGAGAGGACGAG+AGG + chr8.2:76020373-76020392 None:intergenic 60.0%
CACGCCTCCCTAAACCCATG+AGG + chr8.2:76017203-76017222 None:intergenic 60.0%
CACTGCCAACAGCTGCATCG+CGG + chr8.2:76020338-76020357 None:intergenic 60.0%
CCAGAGAGAGGGAGAGAGTC+GGG + chr8.2:76018181-76018200 None:intergenic 60.0%
CCCACTCGAAGGAGAACCTC+TGG - chr8.2:76019597-76019616 MS.gene011236:CDS 60.0%
CCCAGAGAGAGGGAGAGAGT+CGG + chr8.2:76018182-76018201 None:intergenic 60.0%
CCGACTCTCTCCCTCTCTCT+GGG - chr8.2:76018179-76018198 MS.gene011236:intron 60.0%
CGACTCTCTCCCTCTCTCTG+GGG - chr8.2:76018180-76018199 MS.gene011236:intron 60.0%
CTTGCTGCTGGACCGAGTTC+TGG - chr8.2:76019311-76019330 MS.gene011236:intron 60.0%
CTTTGCGCGGGGAACTTTCC+TGG - chr8.2:76017671-76017690 MS.gene011236:CDS 60.0%
GCTAGCGGCAGACCAGAACT+CGG + chr8.2:76019326-76019345 None:intergenic 60.0%
GGAAGTGAAGCCCGGAGAAG+GGG + chr8.2:76020038-76020057 None:intergenic 60.0%
GTGGAAGTGAAGCCCGGAGA+AGG + chr8.2:76020040-76020059 None:intergenic 60.0%
TGGTGCCTCTGTGTAGGTGG+TGG - chr8.2:76019537-76019556 MS.gene011236:intron 60.0%
AGCAGCCGCGATGCAGCTGT+TGG - chr8.2:76020330-76020349 MS.gene011236:intron 65.0%
ATCGCCACTCCTCCTTCCCG+TGG - chr8.2:76019186-76019205 MS.gene011236:CDS 65.0%
CAGCGTGAGAGGACGAGAGG+AGG + chr8.2:76020370-76020389 None:intergenic 65.0%
CCCGACTCTCTCCCTCTCTC+TGG - chr8.2:76018178-76018197 MS.gene011236:intron 65.0%
CTCCTCTCGTCCTCTCACGC+TGG - chr8.2:76020368-76020387 MS.gene011236:CDS 65.0%
GGGTCCGTGGAAGTGAAGCC+CGG + chr8.2:76020046-76020065 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 76015806 76020566 76015806 ID=MS.gene011236
chr8.2 mRNA 76015806 76020566 76015806 ID=MS.gene011236.t1;Parent=MS.gene011236
chr8.2 exon 76020491 76020566 76020491 ID=MS.gene011236.t1.exon1;Parent=MS.gene011236.t1
chr8.2 CDS 76020491 76020566 76020491 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
chr8.2 exon 76020364 76020404 76020364 ID=MS.gene011236.t1.exon2;Parent=MS.gene011236.t1
chr8.2 CDS 76020364 76020404 76020364 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
chr8.2 exon 76019579 76019648 76019579 ID=MS.gene011236.t1.exon3;Parent=MS.gene011236.t1
chr8.2 CDS 76019579 76019648 76019579 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
chr8.2 exon 76019319 76019467 76019319 ID=MS.gene011236.t1.exon4;Parent=MS.gene011236.t1
chr8.2 CDS 76019319 76019467 76019319 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
chr8.2 exon 76019142 76019237 76019142 ID=MS.gene011236.t1.exon5;Parent=MS.gene011236.t1
chr8.2 CDS 76019142 76019237 76019142 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
chr8.2 exon 76018976 76019043 76018976 ID=MS.gene011236.t1.exon6;Parent=MS.gene011236.t1
chr8.2 CDS 76018976 76019043 76018976 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
chr8.2 exon 76017967 76018028 76017967 ID=MS.gene011236.t1.exon7;Parent=MS.gene011236.t1
chr8.2 CDS 76017967 76018028 76017967 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
chr8.2 exon 76017816 76017879 76017816 ID=MS.gene011236.t1.exon8;Parent=MS.gene011236.t1
chr8.2 CDS 76017816 76017879 76017816 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
chr8.2 exon 76017650 76017734 76017650 ID=MS.gene011236.t1.exon9;Parent=MS.gene011236.t1
chr8.2 CDS 76017650 76017734 76017650 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
chr8.2 exon 76017426 76017552 76017426 ID=MS.gene011236.t1.exon10;Parent=MS.gene011236.t1
chr8.2 CDS 76017426 76017552 76017426 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
chr8.2 exon 76017160 76017242 76017160 ID=MS.gene011236.t1.exon11;Parent=MS.gene011236.t1
chr8.2 CDS 76017160 76017242 76017160 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
chr8.2 exon 76017001 76017064 76017001 ID=MS.gene011236.t1.exon12;Parent=MS.gene011236.t1
chr8.2 CDS 76017001 76017064 76017001 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
chr8.2 exon 76016674 76016819 76016674 ID=MS.gene011236.t1.exon13;Parent=MS.gene011236.t1
chr8.2 CDS 76016674 76016819 76016674 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
chr8.2 exon 76015806 76016099 76015806 ID=MS.gene011236.t1.exon14;Parent=MS.gene011236.t1
chr8.2 CDS 76015806 76016099 76015806 ID=cds.MS.gene011236.t1;Parent=MS.gene011236.t1
Gene Sequence

>MS.gene011236

ATGGAACCTCGAATTGGAAATAAGTTCCGTCTTGGGAGAAAAATTGGTAGCGGATCTTTTGGAGAGATCTATTTAGGTTCGTTTTTATTCCAATTTCTTGCATTTTTGTGATTTTTTTGTTGTTGTGAATTTTAGGGTTTTTAATTTGTGTTTTTGTTGCAGGTACCAATATTCAGACAAATGAAGAAGTTGCGATTAAGCTTGTAAGTACCCGAATTTTGAAAAAGAAAATGAAAAAAAAAGTTCTTTTTTTATTCTTTTGAGTTTTTGGTGATTGTGAAATCCGAATACTTTTGTTGTTATTGAAGTTTGATGAGAAGGGGTTATAGAAATTAGTTGAATTTGCTTGTTTTCAGTGATGAATTGAAAGGGGTTATAGAAATTAGTTGAATTTGCTTGTTTTCAGTGATGAATTGAAATAATGAATTTGAAACAAAGAGTTGTATAGGCAATATGGGATATTGAATTTCATTGGTGTGTTTTAGTTTTCGATACTGAACTTGTTGATTTATTTTTGCCTTGTAATCGAAGTATCGATTACAGACGTAGGTAATTAGATGATTGATCAGGTTAGTCAGGTAATCACCATAATCAGACTTGGTTAATCAGTTAAGTTAATGATTACTGGATTAAAATAAAGTAATGATTGATTAGGTGATGTTGATTACCGGTTTGGTATTTGAAGTTATAAGTATCAAGTAATTTAGTCTTTTAAATTTACGAACTGATATTTGGAAATATTGAGCAATTGAGTCGTTTGAATTTACGAATTAACATTATAATTATCGAGCAATTTAGTTGTAAGTATTGAGCAATTTGCAAAGTTTTGTGCATCTCTTTGCTGCAAAATTGAATTTATTGAATGACACTTGTTTAGTTGAGTAGTTTACTAATTTATTTTTGTTTTGTTTGATTCAGGAAAATGTTAAAACCAAGCACCCTCAATTGTTGTATGAAGCAAAGCTGTATAAAATACTGCAAGGAGGAAGTAAGCTCCCAACTTAGTGAATTTGTGTATTTTGGAACTCTTTGCTTACTGTAGACTTCATATTACTTACTTGGCTTAAATGTTTTTTGTTGGGTTTCTTTTCTTTGGAAGCTGGAATACCGAATGTGAAATGGTCCGGTGTGGAAGGAGAGTACAACATCCTTGTGATGGATTTACTTGGCCCTAGTCTTGAGGATTTATTCAATTTCTGTAATAGGAAATTGTCTCTCAAAACTGTTCTTATGCTTGCCGATCAAATGGTGGGTTTCCCTGTATTGCATAAGCTTGTAATTGACATTTACCAGTTTTCTTATAATGTCTCAATCTGCATCTTTTTTCAGATAAATCGAGTTGAATTTGTTCATACCAAGTCATTTTTACATCGGGACATAAAGCCAGACAATTTCCTCATGGGTTTAGGGAGGCGTGCAAATCAAGTACTTGTTTAATTCTTGTTTTTTCAGCTGCTTTCTTAAAATTTATGATCATCTCCAACGCTTGTTATGTATCAATTTCATATTTGCCTCTTATGTAGGTGTACATCATTGACTTTGGTCTTGCTAAGAAATTCAGAGACAGTGCACATCAGCATATTCCCTATAGGTACTTTTATGGCATCAATAGTTTTCTGATTTTATTCAGCATGGTTGCACAGTTCAACTTCAAACTATTCCCCATCGATATATTCCCTATCATGCTTTCTTATTTTGTAAAATCTATTATCATGGAAAATCCTATATCTGGAATCTGGATGTTATGCTATCATGAATTATTTATGTGGATAGCTGATTACTACTATTTAGTAGGAGGAGAGTTTTCTTGTAATAGAAAAAGTAGAAAAATTAATATCATTGAAAGATGCAAAACTAATTTTGAGCTTTGCGCGGGGAACTTTCCTGGTTTTGCATTCCTGGCATTGATTCTATTTTCTTTACTTTGATTTGTTTATGTTTCTATAATCCTTGCATGATTGTTACACCAGTTCGTTAAGTTATTTGCCTTGATGATAGTTTTGTTAGCCTTGTTTGAACTAAGATCCATTGATGCCATACTTACAAACATAATAACTTTTTCTATTTTGTGAAATTAACTAATTCAATGCTTGAATCCTTTAATATTATTTTGGTAATCACATATAATTTTTTTAGATAATTTGGACATCCATATAATAGGTATACAATCAAATAATAAATGTTTACTTACATTTTAAATGTTAAAATGAAGCAGTGCCATTAAGTATCAATTAGTTTTTCTGTTGCATGACATTTTGTAGATTTTATCTACTTTATGAGAATTTTTAACTCAATGACTAGATCAATAAAACTCGTGAATAAAAAGTTATTAAAAGGTGAATTTATGCCAATTAAATTTGGTTTCATTGGATCCCGACTCTCTCCCTCTCTCTGGGGTGTGTAATATCACTTTACCTAGTCTTTACGATTATTTATTTAAAAATCAAGTTAGCACATAACTTATGTTGCTGTAAGTGGTCAAGGAAATATACTCTATTGTGTTTTCTGTGAGTTTGTCTTACATGTAATCCCTTGCAGAGAGAATAAGAATCTGACGGGAACTGCTAGATATGCTAGTATGAATACTCATCTTGGAATTGGTATGCTCTCATAATCTCATTTGATCAGTTCCCTTTCTTAATAGCCATTGATTTTTACCTGAAAATGTGAGTTTTTTGCTTTAATAGAGCAAAGCCGTAGGGATGATTTAGAGTCGCTTGGATATGTTCTTATGTATTTTTTAAGAGGAAGGTAATTAGTCTATCACCTTTATTATTTAGCATTTGACATATCTTTTAATTGGATACTCTTTCTTATTTGGTATTTCTGCAGTCTACCTTGGCAGGGATTGAAAGCAGGTACTAAAAAGCAGAAGTATGAGAGAATCAGTGAGAAGAAAGTTTCTACATCTATTGAGGTATGATTGGAGTGATAAAACAGTAACTTATTTCATATAATGTATGTCCATTATGTCTTTTAAAATCATTGTTGATTGTGGGTTGCTTCTTTGCTAGTCTCTCTGTCGTGGCTATCCCTCAGAATTTGCTTCATACTTCCATTATTGTCGGTCACTGAGGTTTGATGATAAGCCAGATTATGCTTATCTGAAAAGACTTTTGCGTGACCTATTCATCCGTGAAGGTTTGGGCCTTGTTTTCCTATTTATATTTTATTTTTGGAATGATGCACTATAGTCCTTGAAAACCATAGTTTAGGTTCTAGATGGGATGTGTTTTAATGTCATTTTTTCTTTGTCATAGTTTAGGTTCTAGATGGGATGTGTTTTAAATTTATTTTTTCTTTGTTCTTGCCTTGTTGCTCCAGGATTCCAGTTTGATTATGTCTTCGATTGGACTATCTTGAAATATCAGCAGTCTCAAATCGCCACTCCTCCTTCCCGTGGTATTGTAAGTGATGGTGTGCTGTCTCATTACGTTAGCTGGTTGATTGTTGAGATTAAGTTATTCAATTTTTAGTGGAAGTGACAATGTGACACTTACAGGGTCTTGCTGCTGGACCGAGTTCTGGTCTGCCGCTAGCTTCTGCAAATGCTGATGGACAGTCAGGTATCCTTGTTGTTTTAACTTCTCTTTGATTGAGATGTTTAAAGACAGATTGTTATAGTGCAGTTTCATATCATTTAATAACTTGTTAGTTATTCTGTGACATCCTTTTTGTCATCTGACTCATCCTTGAATGATTTTCATTTGTTACCAGTGCATTTTTTAATGTGGTGCCTCTGTGTAGGTGGTGGAAAAGATGGTAGGAATATTGGGTGGTCTTCGTCTGATCCCACTCGAAGGAGAACCTCTGGACCTATTGCTAATGATGGAATCTTATCTAGAGAAAAAGCCCCACTTACAAATGACTTAACCGGATCTAAAGATGCTATGGTGCGTGTTTTATATATGGGCTGTTTTTTGCATGTGAAATCATTTTATTTCTTGCAGAAGTCAAAGATGATGGTTGCTTTGTGCATTAATTTCTAGAATTTTTAATTTGACGATTATTATTCCTGTCCAACATCATATATGATTAAGGAAATCAATATTTATTTGAAATATTGGATTGCTTTACAAAAAGAAAGTATATGAAGACTGTTTACCCTTTATCCAAGGAAAAAATTAAAGTTTTGTCTTGGTGCATTCCATTTCTTTTGTTGGTTTCTAAATGTAAGCAGGTATTGTAAATATTTCTCAAAACTCTGCATTTTGTTAACATCTTACATTCCCCTTCTCCGGGCTTCACTTCCACGGACCCATACTACTGAGTTTAATGGTGTGAATATTGGCGTACTGTGCAAGTTAATATTGGCAAAGAAAATGATTTGAAATGCCGTGTGTTGTATAGTTATCATATATGAGATACCCTTCTGATTAAGTTTATACAAGGTTATCTGTTTATATGGCAATTAGTTTTCATATTACTCATTAACGATTGTTTTGTTTTTTTGCATAATTTATGCAGTTATCGAGTTCGAATTTCTTTCGGTCAAGTGGATCTGCAAGGCGAGGTGCTATGTTAAGCAGCCGCGATGCAGCTGTTGGCAGTGAGACGGAGCCCTCCTCTCGTCCTCTCACGCTGGATTCAAGTCTAGGAGCAGTCCGTAAAAGCTCTGGTGCTCAGAGAAGTTCACATATCATGTCATCGGAGCACAACCGAGTATCATCTGGAAGAAACACATCAAACATAAATAATTTGGATTCAACGCTTAGAGGTATTGAGAGTCTGCATTTAAACGATGAGAGGGCACAGTATTAG

Protein sequence

>MS.gene011236.t1

MEPRIGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYEAKLYKILQGGTGIPNVKWSGVEGEYNILVMDLLGPSLEDLFNFCNRKLSLKTVLMLADQMINRVEFVHTKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKFRDSAHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYERISEKKVSTSIESLCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLLRDLFIREGFQFDYVFDWTILKYQQSQIATPPSRGIGLAAGPSSGLPLASANADGQSGGGKDGRNIGWSSSDPTRRRTSGPIANDGILSREKAPLTNDLTGSKDAMLSSSNFFRSSGSARRGAMLSSRDAAVGSETEPSSRPLTLDSSLGAVRKSSGAQRSSHIMSSEHNRVSSGRNTSNINNLDSTLRGIESLHLNDERAQY