AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene011370


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011370.t1 MTR_4g104360 99.147 703 6 0 1 703 1 703 0.0 1422
MS.gene011370.t1 MTR_6g034560 54.161 709 302 7 1 696 1 699 0.0 702
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene011370.t1 AT5G63190 75.356 702 169 4 1 700 1 700 0.0 1065
MS.gene011370.t1 AT5G63190 75.356 702 169 4 1 700 1 700 0.0 1065
MS.gene011370.t1 AT4G24800 74.856 696 171 3 5 699 2 694 0.0 1025
MS.gene011370.t1 AT4G24800 74.856 696 171 3 5 699 2 694 0.0 1025
MS.gene011370.t1 AT4G24800 74.856 696 171 3 5 699 2 694 0.0 1025
MS.gene011370.t1 AT4G24800 74.856 696 171 3 5 699 2 694 0.0 1025
MS.gene011370.t1 AT3G48390 72.442 606 162 2 96 700 30 631 0.0 904
MS.gene011370.t1 AT1G22730 50.156 642 284 9 78 698 51 677 0.0 603

Find 202 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCAATCCAGCTGGTGAAAA+TGG 0.176893 8.4:+21696603 MS.gene011370:CDS
ACCTCGCCACTATCATAATT+TGG 0.193734 8.4:-21695386 None:intergenic
TCAACAGAGGATATTGTTAA+TGG 0.233545 8.4:+21696864 MS.gene011370:CDS
GTTTCACTACCACTGCATTT+TGG 0.266094 8.4:-21697032 None:intergenic
GTGCTGGTGGTAAGGGCACT+TGG 0.296945 8.4:+21695315 MS.gene011370:CDS
CAGTAATGGGGATGTTGATT+TGG 0.304435 8.4:+21695804 MS.gene011370:CDS
CATGTGCGTCGGTCGCATTC+TGG 0.309681 8.4:+21694045 MS.gene011370:CDS
CGGTCGCATTCTGGAAAGTT+AGG 0.310044 8.4:+21694054 MS.gene011370:CDS
TAAAGGATTCACCCGGATTA+AGG 0.323279 8.4:+21697364 MS.gene011370:CDS
TTCCACCAGCCTTTCTTGCC+AGG 0.329884 8.4:+21696097 MS.gene011370:CDS
TGACATCCTTGCTTTATTCC+TGG 0.334192 8.4:+21696050 MS.gene011370:CDS
TAGATGAATACTTCAGTAAT+GGG 0.339593 8.4:+21695791 MS.gene011370:CDS
TGCTGGTGGTAAGGGCACTT+GGG 0.342359 8.4:+21695316 MS.gene011370:CDS
GAGGTTAATAACACTTGCTT+TGG 0.344003 8.4:+21696776 MS.gene011370:CDS
ACAAGTCGCTTAATGAAGTA+TGG 0.352741 8.4:-21695868 None:intergenic
CAGGGCAAGGAAGGCTCTTC+CGG 0.356489 8.4:+21696116 MS.gene011370:CDS
GCTGGTGGTAAGGGCACTTG+GGG 0.362041 8.4:+21695317 MS.gene011370:CDS
CACTTGAGCCAAGTTCTCTT+AGG 0.362449 8.4:-21695837 None:intergenic
AGATACAACGCTGGATATAC+TGG 0.366558 8.4:+21696914 MS.gene011370:CDS
CCATTGAACTTGGATGAAAT+TGG 0.368898 8.4:+21696996 MS.gene011370:CDS
CATTAGTCCCACACAGATTA+GGG 0.370644 8.4:+21695966 MS.gene011370:CDS
GGGTAGTTTAGCTAGACATC+TGG 0.378154 8.4:-21697500 None:intergenic
CTTAAAGAATATGTTGATAG+TGG 0.380631 8.4:+21696282 MS.gene011370:CDS
TCATTAGTCCCACACAGATT+AGG 0.381188 8.4:+21695965 MS.gene011370:CDS
AGTAGTTCCAACCAGCTCAT+AGG 0.384481 8.4:-21695722 None:intergenic
GAATGTGAGGAAGTACAAAA+AGG 0.386583 8.4:+21696647 MS.gene011370:CDS
TCTAGGCTTCGAATGAGTTC+AGG 0.390486 8.4:-21696714 None:intergenic
CCAATCCAGCTGGTGAAAAT+GGG 0.390549 8.4:+21696604 MS.gene011370:CDS
GGCTATTGAGATGCTGGGGC+GGG 0.391205 8.4:+21697102 MS.gene011370:CDS
CATCAAGACCCTCCTTAATC+CGG 0.394068 8.4:-21697376 None:intergenic
GAGAAAACCCTTTCACCATT+TGG 0.394077 8.4:-21696470 None:intergenic
CCAATTTCATCCAAGTTCAA+TGG 0.400298 8.4:-21696996 None:intergenic
GTGAAAGGCTATTGAGATGC+TGG 0.406948 8.4:+21697096 MS.gene011370:CDS
CTTCCTTGCCCTGGCAAGAA+AGG 0.407487 8.4:-21696106 None:intergenic
CATCCTTCAGATATTGCCTT+GGG 0.409887 8.4:-21696564 None:intergenic
GGGAACTGGATGGGCTGTGG+AGG 0.411357 8.4:+21697124 MS.gene011370:CDS
CAATTTCATCCAAGTTCAAT+GGG 0.413224 8.4:-21696995 None:intergenic
TCAGCTCCCTTGGAAGATTC+CGG 0.416092 8.4:-21696135 None:intergenic
CTTGCCCTGGCAAGAAAGGC+TGG 0.425041 8.4:-21696102 None:intergenic
AAAGTTAGGGCGGGCTAAGA+AGG 0.432147 8.4:+21694068 MS.gene011370:CDS
TAAGGAGGGTCTTGATGATC+TGG 0.435168 8.4:+21697382 MS.gene011370:CDS
GGTGGTAAGGCACAGACTGC+TGG 0.438468 8.4:+21694009 MS.gene011370:CDS
CAGGTGCTCCAAGATCTTCT+AGG 0.438853 8.4:-21696731 None:intergenic
CTTGACTACCTCAGCTCCCT+TGG 0.439299 8.4:-21696145 None:intergenic
AAACCCTTTCACCATTTGGC+TGG 0.441435 8.4:-21696466 None:intergenic
TGCAGATGGTGCTGGTGGTA+AGG 0.445986 8.4:+21695307 MS.gene011370:intron
CCATGGAGAAGAAGAATGAT+AGG 0.451295 8.4:+21697282 MS.gene011370:CDS
CTCTCTTCTGCTCGTCATGC+AGG 0.451990 8.4:+21697074 MS.gene011370:CDS
TTTAACAGCTTCAACAGTAA+AGG 0.452533 8.4:-21696414 None:intergenic
ATTCGAAGCCTAGAAGATCT+TGG 0.457110 8.4:+21696723 MS.gene011370:CDS
TACTGAAGTATTCATCTATG+AGG 0.457447 8.4:-21695786 None:intergenic
AATGATCCAAATTATGATAG+TGG 0.464061 8.4:+21695380 MS.gene011370:CDS
AACTACTGTTACTGACCCCT+TGG 0.468009 8.4:+21695738 MS.gene011370:CDS
GCTTCCTTTGCCAATCCAGC+TGG 0.468039 8.4:+21696594 MS.gene011370:CDS
AGTGAAGAAAGCTTTGGTTA+TGG 0.470878 8.4:+21697259 MS.gene011370:CDS
CTTTCTTGCCAGGGCAAGGA+AGG 0.472429 8.4:+21696107 MS.gene011370:CDS
GAATCTCCATGGCAAGTACC+AGG 0.474177 8.4:-21696380 None:intergenic
TCACATTCTCATCTTCAACT+TGG 0.474950 8.4:-21696632 None:intergenic
TGTGCTTGCCCCATTGAACT+TGG 0.476996 8.4:+21696986 MS.gene011370:CDS
CAAAGCTCCTGCTGGTGGTA+AGG 0.478498 8.4:+21693996 MS.gene011370:CDS
GGGTCTTGATGATCTGGCTC+TGG 0.479384 8.4:+21697388 MS.gene011370:CDS
GCTATTGAGATGCTGGGGCG+GGG 0.479576 8.4:+21697103 MS.gene011370:CDS
GGCAATGGACAGGCATGATA+AGG 0.480888 8.4:+21695897 MS.gene011370:CDS
CCATCACGAGGTTGTGAAGA+AGG 0.481692 8.4:+21696356 MS.gene011370:CDS
GCAGATGGTGCTGGTGGTAA+GGG 0.484044 8.4:+21695308 MS.gene011370:intron
TGCCAGTGTATTCGTGACTT+GGG 0.484187 8.4:+21697212 MS.gene011370:CDS
CGGAAGAGCCTTCCTTGCCC+TGG 0.485045 8.4:-21696115 None:intergenic
TCCACCAGCCTTTCTTGCCA+GGG 0.488180 8.4:+21696098 MS.gene011370:CDS
TGCTTTCTTGAATTCATCCA+AGG 0.489968 8.4:-21695755 None:intergenic
TGAGGTAGTGAAGAAAGCTT+TGG 0.490667 8.4:+21697253 MS.gene011370:CDS
GCGACTTGTTTCCATGGCAA+TGG 0.493441 8.4:+21695882 MS.gene011370:CDS
GAATCCTTTAGTCAGCTGAT+TGG 0.493942 8.4:-21697351 None:intergenic
TGATCTTGCAGTGGATATCC+TGG 0.494069 8.4:+21696020 MS.gene011370:CDS
GAAAGCTTTGGTTATGGCCA+TGG 0.496815 8.4:+21697265 MS.gene011370:CDS
GGTCGCATTCTGGAAAGTTA+GGG 0.496864 8.4:+21694055 MS.gene011370:CDS
CTGCAGGAGTGCTTCAGTGA+AGG 0.497405 8.4:+21697317 MS.gene011370:CDS
CCTATCATTCTTCTTCTCCA+TGG 0.499101 8.4:-21697282 None:intergenic
ATGCCAGTGTATTCGTGACT+TGG 0.499296 8.4:+21697211 MS.gene011370:CDS
GAAGAAGAATGATAGGATGC+TGG 0.500749 8.4:+21697289 MS.gene011370:CDS
GGTAGTTTAGCTAGACATCT+GGG 0.502037 8.4:-21697499 None:intergenic
GGACAAGATCACAAAGCTCT+TGG 0.504142 8.4:+21697154 MS.gene011370:CDS
TTTATAGGAACCCTATGAGC+TGG 0.506672 8.4:+21695711 MS.gene011370:intron
AAAGAACAGAGAAAAGGAAA+TGG 0.507361 8.4:+21696803 MS.gene011370:CDS
CAGCCTTTCTTGCCAGGGCA+AGG 0.508041 8.4:+21696103 MS.gene011370:CDS
GCATCTGACCTAAGAGAACT+TGG 0.508510 8.4:+21695829 MS.gene011370:CDS
ATAGATGAATACTTCAGTAA+TGG 0.511492 8.4:+21695790 MS.gene011370:CDS
TGTAGGTGTATACGTGAGTT+GGG 0.511836 8.4:+21696321 MS.gene011370:CDS
TTGTTTCCATGGCAATGGAC+AGG 0.512207 8.4:+21695887 MS.gene011370:CDS
GTAGTTCCAACCAGCTCATA+GGG 0.512875 8.4:-21695721 None:intergenic
CTTGTGGATGCAGATGGTGC+TGG 0.513272 8.4:+21695299 MS.gene011370:intron
TCCACAAGTTCTGCATGGTG+TGG 0.514197 8.4:-21696195 None:intergenic
GTTCCAGCCAAATGGTGAAA+GGG 0.516399 8.4:+21696463 MS.gene011370:CDS
ACTGATTAGTTCCAGCCAAA+TGG 0.516854 8.4:+21696455 MS.gene011370:CDS
CAACTCACGTATACACCTAC+AGG 0.516859 8.4:-21696319 None:intergenic
GGCTCTTCCGGAATCTTCCA+AGG 0.517641 8.4:+21696128 MS.gene011370:CDS
GCATGATAAGGAGAAAGAAA+TGG 0.518042 8.4:+21695909 MS.gene011370:CDS
AACAGTAAAGGTTCTGCTGA+AGG 0.520154 8.4:-21696402 None:intergenic
CTATATGAAGTGCAGATAGC+AGG 0.521385 8.4:-21696833 None:intergenic
CCATCCTTCAGATATTGCCT+TGG 0.522923 8.4:-21696565 None:intergenic
AGCTGAGAGATAGCTCTTCT+CGG 0.523111 8.4:-21696172 None:intergenic
TATCAAGAGCAAGATCATCT+AGG 0.523207 8.4:-21696506 None:intergenic
GGACCGAAAGAACAGAGAAA+AGG 0.523465 8.4:+21696797 MS.gene011370:CDS
CTATTGAGATGCTGGGGCGG+GGG 0.523618 8.4:+21697104 MS.gene011370:CDS
AGCAATGTCGACGGCGACTT+AGG 0.524812 8.4:-21693955 None:intergenic
CTGTAGGTGTATACGTGAGT+TGG 0.525164 8.4:+21696320 MS.gene011370:CDS
CTCTTGGAGGAGTATGAAAG+TGG 0.525404 8.4:+21697170 MS.gene011370:CDS
CATCACATCAAAGCTCCTGC+TGG 0.525516 8.4:+21693988 MS.gene011370:CDS
TAGCTAGACATCTGGGGCAG+AGG 0.526140 8.4:-21697492 None:intergenic
CATTAAGCGACTTGTTTCCA+TGG 0.528753 8.4:+21695876 MS.gene011370:CDS
TGAAACAAGGCTTTAGCTGA+TGG 0.533442 8.4:-21696531 None:intergenic
TGAAAGGCTATTGAGATGCT+GGG 0.533761 8.4:+21697097 MS.gene011370:CDS
GTGGTAAGGCACAGACTGCT+GGG 0.533927 8.4:+21694010 MS.gene011370:CDS
GAAGGCCCTGGTACTTGCCA+TGG 0.534434 8.4:+21696374 MS.gene011370:CDS
CAAGATCACAAAGCTCTTGG+AGG 0.537964 8.4:+21697157 MS.gene011370:CDS
CAAGGATGTCAACTGCATCC+AGG 0.537979 8.4:-21696038 None:intergenic
GTTTCAGTCATTTGTCCCCA+AGG 0.538145 8.4:+21696548 MS.gene011370:CDS
GCTTTCTTGAATTCATCCAA+GGG 0.546570 8.4:-21695754 None:intergenic
ATCAAGACCCTCCTTAATCC+GGG 0.549632 8.4:-21697375 None:intergenic
TCCTTTAGTCAGCTGATTGG+TGG 0.549699 8.4:-21697348 None:intergenic
TTAAAAGAAGCAGCAGCAGA+AGG 0.550137 8.4:+21696432 MS.gene011370:CDS
AGTTCCAGCCAAATGGTGAA+AGG 0.550968 8.4:+21696462 MS.gene011370:CDS
AGGCTATTGAGATGCTGGGG+CGG 0.551446 8.4:+21697101 MS.gene011370:CDS
CGCATTCTGGAAAGTTAGGG+CGG 0.554864 8.4:+21694058 MS.gene011370:CDS
TTCACCAGCTGGATTGGCAA+AGG 0.554928 8.4:-21696598 None:intergenic
GGGGAAATGGCGTCGAACGA+GGG 0.561534 8.4:+21693862 None:intergenic
ACCACCAATCAGCTGACTAA+AGG 0.562228 8.4:+21697347 MS.gene011370:CDS
ATGGGCTGTGGAGGATGCTA+AGG 0.562248 8.4:+21697133 MS.gene011370:CDS
GTCTGTGCCTTACCACCAGC+AGG 0.563393 8.4:-21694003 None:intergenic
ACTACCTCATGGTTGAAGAA+AGG 0.564053 8.4:-21697239 None:intergenic
AAGTTAGGGCGGGCTAAGAA+GGG 0.565574 8.4:+21694069 MS.gene011370:CDS
CCTTCTTCACAACCTCGTGA+TGG 0.565630 8.4:-21696356 None:intergenic
CTGGTGGTAAGGGCACTTGG+GGG 0.567812 8.4:+21695318 MS.gene011370:CDS
AAGCTTTCTTCACTACCTCA+TGG 0.568149 8.4:-21697250 None:intergenic
TGATGGTAGAAGCCACCCCT+TGG 0.570649 8.4:-21697462 None:intergenic
TAGGAACCCTATGAGCTGGT+TGG 0.572366 8.4:+21695715 MS.gene011370:intron
CATCAACAACAGCACGTGCC+AGG 0.573372 8.4:-21696068 None:intergenic
CTGCTCGTCATGCAGGTGAA+AGG 0.573520 8.4:+21697081 MS.gene011370:CDS
TGGGGAAATGGCGTCGAACG+AGG 0.577450 8.4:+21693861 None:intergenic
GTCTTTCCACAAGTTCTGCA+TGG 0.577504 8.4:-21696200 None:intergenic
GTGGAGCATGCACAGACCAA+GGG 0.578585 8.4:+21697446 MS.gene011370:CDS
AATCCATCCCTAATCTGTGT+GGG 0.579210 8.4:-21695973 None:intergenic
TGGTAGTGAAACTGTGCGTA+TGG 0.580211 8.4:+21697043 MS.gene011370:CDS
CGAGGTTGTGAAGAAGGCCC+TGG 0.585050 8.4:+21696362 MS.gene011370:CDS
ATCATGCCTGTCCATTGCCA+TGG 0.586529 8.4:-21695893 None:intergenic
AGTCCCACACAGATTAGGGA+TGG 0.587668 8.4:+21695970 MS.gene011370:CDS
GTCCCCAAGGCAATATCTGA+AGG 0.590596 8.4:+21696561 MS.gene011370:CDS
TCCACACCATGCAGAACTTG+TGG 0.592118 8.4:+21696194 MS.gene011370:CDS
AGGATTCACCCGGATTAAGG+AGG 0.594490 8.4:+21697367 MS.gene011370:CDS
ACTGAAGTATTCATCTATGA+GGG 0.597331 8.4:-21695785 None:intergenic
TAGGATGCTGGATTTGCTGC+AGG 0.597535 8.4:+21697301 MS.gene011370:CDS
TTCTGCTGAAGGAATCTCCA+TGG 0.597635 8.4:-21696391 None:intergenic
CCAAGGCAATATCTGAAGGA+TGG 0.597668 8.4:+21696565 MS.gene011370:CDS
CAGAACTTGTGGAAAGACGA+TGG 0.601439 8.4:+21696205 MS.gene011370:CDS
TCAGCTGATTGGTGGTGATG+AGG 0.602174 8.4:-21697340 None:intergenic
CAATCCAGCTGGTGAAAATG+GGG 0.602846 8.4:+21696605 MS.gene011370:CDS
AAATCCATCCCTAATCTGTG+TGG 0.607645 8.4:-21695974 None:intergenic
GGGGCAGAGGAATCAAATGA+TGG 0.608075 8.4:-21697479 None:intergenic
CACATCAAAGCTCCTGCTGG+TGG 0.608523 8.4:+21693991 MS.gene011370:CDS
GCATTCTGGAAAGTTAGGGC+GGG 0.610221 8.4:+21694059 MS.gene011370:CDS
TGTGGAGCATGCACAGACCA+AGG 0.614176 8.4:+21697445 MS.gene011370:CDS
GGATTCACCCGGATTAAGGA+GGG 0.622780 8.4:+21697368 MS.gene011370:CDS
AGAACTTGTGGAAAGACGAT+GGG 0.626205 8.4:+21696206 MS.gene011370:CDS
ATCTGCTGATGATCTTGCAG+TGG 0.629980 8.4:+21696011 MS.gene011370:CDS
TATCATAATTTGGATCATTG+CGG 0.630208 8.4:-21695376 None:intergenic
GCCAGTGTATTCGTGACTTG+GGG 0.631751 8.4:+21697213 MS.gene011370:CDS
CTTTCTTGAATTCATCCAAG+GGG 0.633512 8.4:-21695753 None:intergenic
AGTTGCATTCTTCCATCACG+AGG 0.633964 8.4:+21696344 MS.gene011370:CDS
TTGCTGTGAGGCATGTGCGT+CGG 0.634726 8.4:+21694034 MS.gene011370:CDS
TCTTGGAGGAGTATGAAAGT+GGG 0.639560 8.4:+21697171 MS.gene011370:CDS
GCTCTTCCGGAATCTTCCAA+GGG 0.641419 8.4:+21696129 MS.gene011370:CDS
AAATGCTGAAGATACAACGC+TGG 0.642106 8.4:+21696905 MS.gene011370:CDS
GTGGATGCAGATGGTGCTGG+TGG 0.644646 8.4:+21695302 MS.gene011370:intron
TATAGAGATATTCTCAACAG+AGG 0.644683 8.4:+21696851 MS.gene011370:CDS
GGAATCTTCCAAGGGAGCTG+AGG 0.644900 8.4:+21696137 MS.gene011370:CDS
CACGTGCCAGGAATAAAGCA+AGG 0.649502 8.4:-21696056 None:intergenic
TGGAGGAGTATGAAAGTGGG+GGG 0.649814 8.4:+21697174 MS.gene011370:CDS
TTGGAGGAGTATGAAAGTGG+GGG 0.650081 8.4:+21697173 MS.gene011370:CDS
CTTGGAGGAGTATGAAAGTG+GGG 0.653649 8.4:+21697172 MS.gene011370:CDS
AAGTTGAAGATGAGAATGTG+AGG 0.655201 8.4:+21696634 MS.gene011370:CDS
GGGGACAAATGACTGAAACA+AGG 0.656814 8.4:-21696544 None:intergenic
GGAGGAGTATGAAAGTGGGG+GGG 0.657610 8.4:+21697175 MS.gene011370:CDS
TCTGGACATACCAAACGCCA+AGG 0.659262 8.4:+21697406 MS.gene011370:CDS
GCCCTGGCAAGAAAGGCTGG+TGG 0.659425 8.4:-21696099 None:intergenic
AGCATGCACAGACCAAGGGG+TGG 0.663824 8.4:+21697450 MS.gene011370:CDS
AGCTGACTAAAGGATTCACC+CGG 0.666003 8.4:+21697357 MS.gene011370:CDS
GGATGAATTCAAGAAAGCAG+TGG 0.666447 8.4:+21695759 MS.gene011370:CDS
AGATGAATACTTCAGTAATG+GGG 0.676923 8.4:+21695792 MS.gene011370:CDS
AATCTCCATGGCAAGTACCA+GGG 0.677633 8.4:-21696379 None:intergenic
GAAAGGCTATTGAGATGCTG+GGG 0.679754 8.4:+21697098 MS.gene011370:CDS
GCGAGACACTTGAAGCCTGT+AGG 0.680196 8.4:+21696304 MS.gene011370:CDS
TGGAGCATGCACAGACCAAG+GGG 0.681884 8.4:+21697447 MS.gene011370:CDS
TGATCAGCAAGCAATGTCGA+CGG 0.684900 8.4:-21693964 None:intergenic
GTAGTTTAGCTAGACATCTG+GGG 0.685216 8.4:-21697498 None:intergenic
CTTGTGGAAAGACGATGGGG+TGG 0.687294 8.4:+21696210 MS.gene011370:CDS
TCCCCAAGTCACGAATACAC+TGG 0.687638 8.4:-21697214 None:intergenic
ATCCTTCAGATATTGCCTTG+GGG 0.691723 8.4:-21696563 None:intergenic
AGACTGCTGGGATTGCTGTG+AGG 0.694684 8.4:+21694022 MS.gene011370:CDS
AGACTACCACCAAAATGCAG+TGG 0.698145 8.4:+21697023 MS.gene011370:CDS
TCCAAATTATGATAGTGGCG+AGG 0.698403 8.4:+21695385 MS.gene011370:CDS
GATGCCTTTCTTCAACCATG+AGG 0.721876 8.4:+21697235 MS.gene011370:CDS
AATTTCATCCAAGTTCAATG+GGG 0.741522 8.4:-21696994 None:intergenic
GAACTTGTGGAAAGACGATG+GGG 0.755832 8.4:+21696207 MS.gene011370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAATAATTTATACATATA+AGG + chr8.4:21694654-21694673 MS.gene011370:intron 10.0%
!! TTTATACATATAAGTTATAA+CGG + chr8.4:21694662-21694681 MS.gene011370:intron 10.0%
!! TTTATACATATTAGTTATAA+CGG + chr8.4:21694560-21694579 MS.gene011370:intron 10.0%
!! TAGTATATATTTAGATGAAT+AGG + chr8.4:21694248-21694267 MS.gene011370:intron 15.0%
!! TTTATACATATAAGGTATAA+CGG + chr8.4:21694764-21694783 MS.gene011370:intron 15.0%
!!! TAAATTATTTTCCTAAAAAG+TGG - chr8.4:21694544-21694563 None:intergenic 15.0%
!!! TTACCAATTGTTTTTTTTAA+TGG + chr8.4:21695245-21695264 MS.gene011370:intron 15.0%
!! AGACCATTAAAAAAAACAAT+TGG - chr8.4:21695251-21695270 None:intergenic 20.0%
!! AGTGAATTTACTAGAAATTT+AGG - chr8.4:21695115-21695134 None:intergenic 20.0%
!! ATTAACCTCTTCAAAAATAT+TGG - chr8.4:21696765-21696784 None:intergenic 20.0%
!! CAAACTATCTTAAAAAAAGA+TGG + chr8.4:21695514-21695533 MS.gene011370:intron 20.0%
!! TTAACCTCTTCAAAAATATT+GGG - chr8.4:21696764-21696783 None:intergenic 20.0%
!!! TTTGGATAATTTTCATAAAC+TGG + chr8.4:21695146-21695165 MS.gene011370:intron 20.0%
!!! TTTTATCATTCTGATTTTGT+TGG + chr8.4:21695418-21695437 MS.gene011370:intron 20.0%
! AAAAATATTGGGTTATACTC+AGG - chr8.4:21696753-21696772 None:intergenic 25.0%
! AATGATCCAAATTATGATAG+TGG + chr8.4:21695380-21695399 MS.gene011370:CDS 25.0%
! ATAGATGAATACTTCAGTAA+TGG + chr8.4:21695790-21695809 MS.gene011370:CDS 25.0%
! ATTCACTTGCACATATTATT+TGG + chr8.4:21695128-21695147 MS.gene011370:intron 25.0%
! GTAATAGTGTTAACTAAACT+AGG - chr8.4:21694956-21694975 None:intergenic 25.0%
! TACAGAAGAGTTAACAATAT+GGG - chr8.4:21695593-21695612 None:intergenic 25.0%
! TAGAATGGAAAAAATAAAGC+AGG - chr8.4:21695623-21695642 None:intergenic 25.0%
! TAGATGAATACTTCAGTAAT+GGG + chr8.4:21695791-21695810 MS.gene011370:CDS 25.0%
! TATCATAATTTGGATCATTG+CGG - chr8.4:21695379-21695398 None:intergenic 25.0%
!! ATAGAAAGCAAATTTTTCCT+TGG - chr8.4:21697426-21697445 None:intergenic 25.0%
!! CTTAAAGAATATGTTGATAG+TGG + chr8.4:21696282-21696301 MS.gene011370:CDS 25.0%
!! TAGGATTTTCGAAGTTTATT+CGG + chr8.4:21694279-21694298 MS.gene011370:intron 25.0%
!! TGCATACTTTTGCATTTTAT+AGG + chr8.4:21695696-21695715 MS.gene011370:intron 25.0%
!!! AAGCTGTAGTATTTTTACTT+AGG + chr8.4:21694169-21694188 MS.gene011370:intron 25.0%
!!! AAGTCATTCATTATTTCTGA+AGG + chr8.4:21694911-21694930 MS.gene011370:intron 25.0%
!!! ATAACCCAATATTTTTGAAG+AGG + chr8.4:21696757-21696776 MS.gene011370:CDS 25.0%
!!! GTTATTGTTTCTGATAAATG+TGG + chr8.4:21694415-21694434 MS.gene011370:intron 25.0%
!!! TTACTTTATTTCGTCTTTTG+CGG + chr8.4:21694339-21694358 MS.gene011370:intron 25.0%
AAAGAACAGAGAAAAGGAAA+TGG + chr8.4:21696803-21696822 MS.gene011370:CDS 30.0%
AATTTCATCCAAGTTCAATG+GGG - chr8.4:21696997-21697016 None:intergenic 30.0%
ACAACAAGAGAAAGATAGAA+TGG - chr8.4:21695638-21695657 None:intergenic 30.0%
AGATGAATACTTCAGTAATG+GGG + chr8.4:21695792-21695811 MS.gene011370:CDS 30.0%
AGATGAATAGGTGATAGATT+AGG + chr8.4:21694260-21694279 MS.gene011370:intron 30.0%
AGCTAATCTTATTGATCATG+AGG + chr8.4:21695002-21695021 MS.gene011370:intron 30.0%
CAATTTCATCCAAGTTCAAT+GGG - chr8.4:21696998-21697017 None:intergenic 30.0%
CATGCGATAATAATCTACAT+TGG + chr8.4:21695272-21695291 MS.gene011370:intron 30.0%
CTAAAAAGTGGTATTGTATC+TGG - chr8.4:21694634-21694653 None:intergenic 30.0%
CTCAATCAATTAGAACTGAT+AGG + chr8.4:21694490-21694509 MS.gene011370:intron 30.0%
GTACAGAAGAGTTAACAATA+TGG - chr8.4:21695594-21695613 None:intergenic 30.0%
TATAGAGATATTCTCAACAG+AGG + chr8.4:21696851-21696870 MS.gene011370:CDS 30.0%
TCAACAGAGGATATTGTTAA+TGG + chr8.4:21696864-21696883 MS.gene011370:CDS 30.0%
TTTAACAGCTTCAACAGTAA+AGG - chr8.4:21696417-21696436 None:intergenic 30.0%
! AATGATTGCATTTTCGGTAT+AGG + chr8.4:21694694-21694713 MS.gene011370:intron 30.0%
! ACTGAAGTATTCATCTATGA+GGG - chr8.4:21695788-21695807 None:intergenic 30.0%
! AGGATTTTCGAAGTTTATTC+GGG + chr8.4:21694280-21694299 MS.gene011370:intron 30.0%
! CTATCAGTTCTAATTGATTG+AGG - chr8.4:21694492-21694511 None:intergenic 30.0%
! GGAAAAATTTGCTTTCTATG+TGG + chr8.4:21697427-21697446 MS.gene011370:CDS 30.0%
! GGATAATTTTCATAAACTGG+AGG + chr8.4:21695149-21695168 MS.gene011370:intron 30.0%
! TACTGAAGTATTCATCTATG+AGG - chr8.4:21695789-21695808 None:intergenic 30.0%
! TCTGTGAATGATTGCATTTT+CGG + chr8.4:21694688-21694707 MS.gene011370:intron 30.0%
! TCTGTGAATGATTGCATTTT+TGG + chr8.4:21694688-21694707 MS.gene011370:intron 30.0%
! TTTCCTTTTCTCTGTTCTTT+CGG - chr8.4:21696803-21696822 None:intergenic 30.0%
! TTTTGTCGTAGTTGCATTTT+CGG + chr8.4:21694823-21694842 MS.gene011370:intron 30.0%
!! AGTATTTTTACTTAGGCTGT+TGG + chr8.4:21694176-21694195 MS.gene011370:intron 30.0%
!! GATCAATAAGATTAGCTTCA+TGG - chr8.4:21694999-21695018 None:intergenic 30.0%
!! TAGAAGAAAGACTTTTGAGA+AGG + chr8.4:21694216-21694235 MS.gene011370:intron 30.0%
!!! ATGATTGCATTTTTGGTACA+TGG + chr8.4:21694797-21694816 MS.gene011370:intron 30.0%
!!! CAGATACAATACCACTTTTT+AGG + chr8.4:21694632-21694651 MS.gene011370:intron 30.0%
!!! TGATTGCATTTTTGGTACAT+GGG + chr8.4:21694798-21694817 MS.gene011370:intron 30.0%
AAGTTGAAGATGAGAATGTG+AGG + chr8.4:21696634-21696653 MS.gene011370:CDS 35.0%
AATCTACATTGGTCATCTTG+TGG + chr8.4:21695283-21695302 MS.gene011370:intron 35.0%
ACAAGTCGCTTAATGAAGTA+TGG - chr8.4:21695871-21695890 None:intergenic 35.0%
CACATATTAGCCCTGAATTT+GGG - chr8.4:21695216-21695235 None:intergenic 35.0%
CCAATTTCATCCAAGTTCAA+TGG - chr8.4:21696999-21697018 None:intergenic 35.0%
CCATTGAACTTGGATGAAAT+TGG + chr8.4:21696996-21697015 MS.gene011370:CDS 35.0%
CTAAAAAGTGGTATCGTATC+TGG - chr8.4:21694532-21694551 None:intergenic 35.0%
CTTTCTTGAATTCATCCAAG+GGG - chr8.4:21695756-21695775 None:intergenic 35.0%
GAAAAAATAAAGCAGGCAAC+AGG - chr8.4:21695616-21695635 None:intergenic 35.0%
GAGGTTAATAACACTTGCTT+TGG + chr8.4:21696776-21696795 MS.gene011370:CDS 35.0%
GCATGATAAGGAGAAAGAAA+TGG + chr8.4:21695909-21695928 MS.gene011370:CDS 35.0%
GCTTTCTTGAATTCATCCAA+GGG - chr8.4:21695757-21695776 None:intergenic 35.0%
GTTAACAATATGGGTCTGTT+TGG - chr8.4:21695584-21695603 None:intergenic 35.0%
TATCAAGAGCAAGATCATCT+AGG - chr8.4:21696509-21696528 None:intergenic 35.0%
TCACATATTAGCCCTGAATT+TGG - chr8.4:21695217-21695236 None:intergenic 35.0%
TCACATTCTCATCTTCAACT+TGG - chr8.4:21696635-21696654 None:intergenic 35.0%
TGATTCTATATGCTATGCTG+TGG + chr8.4:21694127-21694146 MS.gene011370:intron 35.0%
TGCTTTCTTGAATTCATCCA+AGG - chr8.4:21695758-21695777 None:intergenic 35.0%
TTATTGATCATGAGGTACAG+AGG + chr8.4:21695010-21695029 MS.gene011370:intron 35.0%
TTTCCTTTCTCCCAAATTCA+GGG + chr8.4:21695203-21695222 MS.gene011370:intron 35.0%
! AATGATCGCATTTTCGGTAT+AGG + chr8.4:21694592-21694611 MS.gene011370:intron 35.0%
! AGTGAAGAAAGCTTTGGTTA+TGG + chr8.4:21697259-21697278 MS.gene011370:CDS 35.0%
! GAATGTGAGGAAGTACAAAA+AGG + chr8.4:21696647-21696666 MS.gene011370:CDS 35.0%
! GGAAGCAAAATCATTTTCGT+TGG - chr8.4:21694978-21694997 None:intergenic 35.0%
! TAGTTGCATTTTCGGTACAT+GGG + chr8.4:21694831-21694850 MS.gene011370:intron 35.0%
! TCAGTTCTAATTGATTGAGG+AGG - chr8.4:21694489-21694508 None:intergenic 35.0%
! TCTGTGAATGATCGCATTTT+CGG + chr8.4:21694586-21694605 MS.gene011370:intron 35.0%
! TTTTCCTTTCTCCCAAATTC+AGG + chr8.4:21695202-21695221 MS.gene011370:intron 35.0%
!! ATTTTTGACTGAAGGACAGA+GGG + chr8.4:21693885-21693904 MS.gene011370:CDS 35.0%
!!! CAGATACGATACCACTTTTT+AGG + chr8.4:21694530-21694549 MS.gene011370:intron 35.0%
!!! TAATGGTTTTGTCATGCTTC+TGG + chr8.4:21696881-21696900 MS.gene011370:CDS 35.0%
AAATCCATCCCTAATCTGTG+TGG - chr8.4:21695977-21695996 None:intergenic 40.0%
AAATGCTGAAGATACAACGC+TGG + chr8.4:21696905-21696924 MS.gene011370:CDS 40.0%
AACAGTAAAGGTTCTGCTGA+AGG - chr8.4:21696405-21696424 None:intergenic 40.0%
AAGCTTTCTTCACTACCTCA+TGG - chr8.4:21697253-21697272 None:intergenic 40.0%
AATCCATCCCTAATCTGTGT+GGG - chr8.4:21695976-21695995 None:intergenic 40.0%
AATGAATGACTTTCCACCCT+TGG - chr8.4:21694903-21694922 None:intergenic 40.0%
ACCTCGCCACTATCATAATT+TGG - chr8.4:21695389-21695408 None:intergenic 40.0%
ACTACCTCATGGTTGAAGAA+AGG - chr8.4:21697242-21697261 None:intergenic 40.0%
AGAACTTGTGGAAAGACGAT+GGG + chr8.4:21696206-21696225 MS.gene011370:CDS 40.0%
AGATACAACGCTGGATATAC+TGG + chr8.4:21696914-21696933 MS.gene011370:CDS 40.0%
ATCCTTCAGATATTGCCTTG+GGG - chr8.4:21696566-21696585 None:intergenic 40.0%
ATGAATGACTTTCCACCCTT+GGG - chr8.4:21694902-21694921 None:intergenic 40.0%
ATTCGAAGCCTAGAAGATCT+TGG + chr8.4:21696723-21696742 MS.gene011370:CDS 40.0%
CATCCTTCAGATATTGCCTT+GGG - chr8.4:21696567-21696586 None:intergenic 40.0%
CATTAGTCCCACACAGATTA+GGG + chr8.4:21695966-21695985 MS.gene011370:CDS 40.0%
CCATGGAGAAGAAGAATGAT+AGG + chr8.4:21697282-21697301 MS.gene011370:CDS 40.0%
CCTATCATTCTTCTTCTCCA+TGG - chr8.4:21697285-21697304 None:intergenic 40.0%
CTATATGAAGTGCAGATAGC+AGG - chr8.4:21696836-21696855 None:intergenic 40.0%
GAAGAAGAATGATAGGATGC+TGG + chr8.4:21697289-21697308 MS.gene011370:CDS 40.0%
GAATCCTTTAGTCAGCTGAT+TGG - chr8.4:21697354-21697373 None:intergenic 40.0%
GAGAAAACCCTTTCACCATT+TGG - chr8.4:21696473-21696492 None:intergenic 40.0%
GGATGAATTCAAGAAAGCAG+TGG + chr8.4:21695759-21695778 MS.gene011370:CDS 40.0%
GGCTGTTGGATTTCTTGAAA+AGG + chr8.4:21694190-21694209 MS.gene011370:intron 40.0%
GTGGACATCAATGCAAAACA+AGG + chr8.4:21695032-21695051 MS.gene011370:intron 40.0%
TAAAGGATTCACCCGGATTA+AGG + chr8.4:21697364-21697383 MS.gene011370:CDS 40.0%
TATGGGTCTGTTTGGAAGAT+TGG - chr8.4:21695576-21695595 None:intergenic 40.0%
TCATTAGTCCCACACAGATT+AGG + chr8.4:21695965-21695984 MS.gene011370:CDS 40.0%
TGAAAGGCTATTGAGATGCT+GGG + chr8.4:21697097-21697116 MS.gene011370:CDS 40.0%
TGAGGTAGTGAAGAAAGCTT+TGG + chr8.4:21697253-21697272 MS.gene011370:CDS 40.0%
TGTAGGTGTATACGTGAGTT+GGG + chr8.4:21696321-21696340 MS.gene011370:CDS 40.0%
TTAAAAGAAGCAGCAGCAGA+AGG + chr8.4:21696432-21696451 MS.gene011370:CDS 40.0%
TTTATAGGAACCCTATGAGC+TGG + chr8.4:21695711-21695730 MS.gene011370:intron 40.0%
TTTCTTCCCATCATTCCCAA+GGG + chr8.4:21694884-21694903 MS.gene011370:intron 40.0%
! ACATGGGCATTTTGTCGTAT+TGG + chr8.4:21694847-21694866 MS.gene011370:intron 40.0%
! ACTGATTAGTTCCAGCCAAA+TGG + chr8.4:21696455-21696474 MS.gene011370:CDS 40.0%
! ATTTCGTCTTTTGCGGCTAA+TGG + chr8.4:21694346-21694365 MS.gene011370:intron 40.0%
! CAGTAATGGGGATGTTGATT+TGG + chr8.4:21695804-21695823 MS.gene011370:CDS 40.0%
! CATTAAGCGACTTGTTTCCA+TGG + chr8.4:21695876-21695895 MS.gene011370:CDS 40.0%
! GCAAATTTTTCCTTGGCGTT+TGG - chr8.4:21697419-21697438 None:intergenic 40.0%
! GTAGTTGCATTTTCGGTACA+TGG + chr8.4:21694830-21694849 MS.gene011370:intron 40.0%
! GTTTCACTACCACTGCATTT+TGG - chr8.4:21697035-21697054 None:intergenic 40.0%
! TCTTGGAGGAGTATGAAAGT+GGG + chr8.4:21697171-21697190 MS.gene011370:CDS 40.0%
! TGAAACAAGGCTTTAGCTGA+TGG - chr8.4:21696534-21696553 None:intergenic 40.0%
! TGACATCCTTGCTTTATTCC+TGG + chr8.4:21696050-21696069 MS.gene011370:CDS 40.0%
!! AACGAGGGATTTTTGACTGA+AGG + chr8.4:21693877-21693896 MS.gene011370:CDS 40.0%
!! GATTTTTGACTGAAGGACAG+AGG + chr8.4:21693884-21693903 MS.gene011370:CDS 40.0%
!! TCCAAATTATGATAGTGGCG+AGG + chr8.4:21695385-21695404 MS.gene011370:CDS 40.0%
!!! AGCTTGCTCTGTTTTTAGCT+CGG + chr8.4:21696949-21696968 MS.gene011370:CDS 40.0%
!!! GGCTAATGGCTTTTTTGCAA+TGG + chr8.4:21694360-21694379 MS.gene011370:intron 40.0%
AAACCCTTTCACCATTTGGC+TGG - chr8.4:21696469-21696488 None:intergenic 45.0%
AACTACTGTTACTGACCCCT+TGG + chr8.4:21695738-21695757 MS.gene011370:CDS 45.0%
AATCTCCATGGCAAGTACCA+GGG - chr8.4:21696382-21696401 None:intergenic 45.0%
ACCACCAATCAGCTGACTAA+AGG + chr8.4:21697347-21697366 MS.gene011370:CDS 45.0%
AGACTACCACCAAAATGCAG+TGG + chr8.4:21697023-21697042 MS.gene011370:CDS 45.0%
AGCTGACTAAAGGATTCACC+CGG + chr8.4:21697357-21697376 MS.gene011370:CDS 45.0%
AGCTGAGAGATAGCTCTTCT+CGG - chr8.4:21696175-21696194 None:intergenic 45.0%
AGGGTGAGTTGTGTGTTCTT+TGG + chr8.4:21694088-21694107 MS.gene011370:intron 45.0%
AGTAGTTCCAACCAGCTCAT+AGG - chr8.4:21695725-21695744 None:intergenic 45.0%
AGTTCCAGCCAAATGGTGAA+AGG + chr8.4:21696462-21696481 MS.gene011370:CDS 45.0%
AGTTGCATTCTTCCATCACG+AGG + chr8.4:21696344-21696363 MS.gene011370:CDS 45.0%
ATCAAGACCCTCCTTAATCC+GGG - chr8.4:21697378-21697397 None:intergenic 45.0%
ATCTGCTGATGATCTTGCAG+TGG + chr8.4:21696011-21696030 MS.gene011370:CDS 45.0%
ATGCCAGTGTATTCGTGACT+TGG + chr8.4:21697211-21697230 MS.gene011370:CDS 45.0%
CAACTCACGTATACACCTAC+AGG - chr8.4:21696322-21696341 None:intergenic 45.0%
CAAGATCACAAAGCTCTTGG+AGG + chr8.4:21697157-21697176 MS.gene011370:CDS 45.0%
CAATCCAGCTGGTGAAAATG+GGG + chr8.4:21696605-21696624 MS.gene011370:CDS 45.0%
CACTTGAGCCAAGTTCTCTT+AGG - chr8.4:21695840-21695859 None:intergenic 45.0%
CAGAACTTGTGGAAAGACGA+TGG + chr8.4:21696205-21696224 MS.gene011370:CDS 45.0%
CATCAAGACCCTCCTTAATC+CGG - chr8.4:21697379-21697398 None:intergenic 45.0%
CCAAGGCAATATCTGAAGGA+TGG + chr8.4:21696565-21696584 MS.gene011370:CDS 45.0%
CCAATCCAGCTGGTGAAAAT+GGG + chr8.4:21696604-21696623 MS.gene011370:CDS 45.0%
CCATCCTTCAGATATTGCCT+TGG - chr8.4:21696568-21696587 None:intergenic 45.0%
CTGTAGGTGTATACGTGAGT+TGG + chr8.4:21696320-21696339 MS.gene011370:CDS 45.0%
CTTTCTTCCCATCATTCCCA+AGG + chr8.4:21694883-21694902 MS.gene011370:intron 45.0%
GAAAGGCTATTGAGATGCTG+GGG + chr8.4:21697098-21697117 MS.gene011370:CDS 45.0%
GAACTTGTGGAAAGACGATG+GGG + chr8.4:21696207-21696226 MS.gene011370:CDS 45.0%
GATGCCTTTCTTCAACCATG+AGG + chr8.4:21697235-21697254 MS.gene011370:CDS 45.0%
GCATCTGACCTAAGAGAACT+TGG + chr8.4:21695829-21695848 MS.gene011370:CDS 45.0%
GGACAAGATCACAAAGCTCT+TGG + chr8.4:21697154-21697173 MS.gene011370:CDS 45.0%
GGACCGAAAGAACAGAGAAA+AGG + chr8.4:21696797-21696816 MS.gene011370:CDS 45.0%
GGGGACAAATGACTGAAACA+AGG - chr8.4:21696547-21696566 None:intergenic 45.0%
GGTCTGTTTGGAAGATTGGA+GGG - chr8.4:21695572-21695591 None:intergenic 45.0%
GTAGTTCCAACCAGCTCATA+GGG - chr8.4:21695724-21695743 None:intergenic 45.0%
GTCTGTTTGGAAGATTGGAG+GGG - chr8.4:21695571-21695590 None:intergenic 45.0%
GTCTTTCCACAAGTTCTGCA+TGG - chr8.4:21696203-21696222 None:intergenic 45.0%
GTGAAAGGCTATTGAGATGC+TGG + chr8.4:21697096-21697115 MS.gene011370:CDS 45.0%
GTTCCAGCCAAATGGTGAAA+GGG + chr8.4:21696463-21696482 MS.gene011370:CDS 45.0%
GTTTCAGTCATTTGTCCCCA+AGG + chr8.4:21696548-21696567 MS.gene011370:CDS 45.0%
TAGCCCTGAATTTGGGAGAA+AGG - chr8.4:21695209-21695228 None:intergenic 45.0%
TCCTTTAGTCAGCTGATTGG+TGG - chr8.4:21697351-21697370 None:intergenic 45.0%
TCTAGGCTTCGAATGAGTTC+AGG - chr8.4:21696717-21696736 None:intergenic 45.0%
TGATCAGCAAGCAATGTCGA+CGG - chr8.4:21693967-21693986 None:intergenic 45.0%
TGATCTTGCAGTGGATATCC+TGG + chr8.4:21696020-21696039 MS.gene011370:CDS 45.0%
TGCCAGTGTATTCGTGACTT+GGG + chr8.4:21697212-21697231 MS.gene011370:CDS 45.0%
TTCTGCTGAAGGAATCTCCA+TGG - chr8.4:21696394-21696413 None:intergenic 45.0%
TTGATCATGAGGTACAGAGG+TGG + chr8.4:21695013-21695032 MS.gene011370:intron 45.0%
TTGTTTCCATGGCAATGGAC+AGG + chr8.4:21695887-21695906 MS.gene011370:CDS 45.0%
TTTCCACCCTTGGGAATGAT+GGG - chr8.4:21694893-21694912 None:intergenic 45.0%
! AATTCCCCATTTTCACCAGC+TGG - chr8.4:21696612-21696631 None:intergenic 45.0%
! CTCTTGGAGGAGTATGAAAG+TGG + chr8.4:21697170-21697189 MS.gene011370:CDS 45.0%
! CTTGGAGGAGTATGAAAGTG+GGG + chr8.4:21697172-21697191 MS.gene011370:CDS 45.0%
! GAAAGCTTTGGTTATGGCCA+TGG + chr8.4:21697265-21697284 MS.gene011370:CDS 45.0%
! GGGTTTTCTCGATTGGAAGA+AGG + chr8.4:21696483-21696502 MS.gene011370:CDS 45.0%
! GGTCGCATTCTGGAAAGTTA+GGG + chr8.4:21694055-21694074 MS.gene011370:CDS 45.0%
! GGTGAAAGGGTTTTCTCGAT+TGG + chr8.4:21696476-21696495 MS.gene011370:CDS 45.0%
! TAAGGAGGGTCTTGATGATC+TGG + chr8.4:21697382-21697401 MS.gene011370:CDS 45.0%
! TCACTACCACTGCATTTTGG+TGG - chr8.4:21697032-21697051 None:intergenic 45.0%
! TGGTAGTGAAACTGTGCGTA+TGG + chr8.4:21697043-21697062 MS.gene011370:CDS 45.0%
! TTGGAGGAGTATGAAAGTGG+GGG + chr8.4:21697173-21697192 MS.gene011370:CDS 45.0%
!!! GCTTGCTCTGTTTTTAGCTC+GGG + chr8.4:21696950-21696969 MS.gene011370:CDS 45.0%
AGGATTCACCCGGATTAAGG+AGG + chr8.4:21697367-21697386 MS.gene011370:CDS 50.0%
AGTCCCACACAGATTAGGGA+TGG + chr8.4:21695970-21695989 MS.gene011370:CDS 50.0%
ATCATGCCTGTCCATTGCCA+TGG - chr8.4:21695896-21695915 None:intergenic 50.0%
CAAGGATGTCAACTGCATCC+AGG - chr8.4:21696041-21696060 None:intergenic 50.0%
CACGTGCCAGGAATAAAGCA+AGG - chr8.4:21696059-21696078 None:intergenic 50.0%
CAGGTGCTCCAAGATCTTCT+AGG - chr8.4:21696734-21696753 None:intergenic 50.0%
CATCACATCAAAGCTCCTGC+TGG + chr8.4:21693988-21694007 MS.gene011370:CDS 50.0%
CCATCACGAGGTTGTGAAGA+AGG + chr8.4:21696356-21696375 MS.gene011370:CDS 50.0%
CCTTCTTCACAACCTCGTGA+TGG - chr8.4:21696359-21696378 None:intergenic 50.0%
CTTTCCACCCTTGGGAATGA+TGG - chr8.4:21694894-21694913 None:intergenic 50.0%
GAATCTCCATGGCAAGTACC+AGG - chr8.4:21696383-21696402 None:intergenic 50.0%
GCCAATCCAGCTGGTGAAAA+TGG + chr8.4:21696603-21696622 MS.gene011370:CDS 50.0%
GCCAGTGTATTCGTGACTTG+GGG + chr8.4:21697213-21697232 MS.gene011370:CDS 50.0%
GCTCTTCCGGAATCTTCCAA+GGG + chr8.4:21696129-21696148 MS.gene011370:CDS 50.0%
GGATTCACCCGGATTAAGGA+GGG + chr8.4:21697368-21697387 MS.gene011370:CDS 50.0%
GGCAATGGACAGGCATGATA+AGG + chr8.4:21695897-21695916 MS.gene011370:CDS 50.0%
GGGGCAGAGGAATCAAATGA+TGG - chr8.4:21697482-21697501 None:intergenic 50.0%
GGGTCTGTTTGGAAGATTGG+AGG - chr8.4:21695573-21695592 None:intergenic 50.0%
GGTCATCTTGTGGATGCAGA+TGG + chr8.4:21695293-21695312 MS.gene011370:intron 50.0%
GTCCCCAAGGCAATATCTGA+AGG + chr8.4:21696561-21696580 MS.gene011370:CDS 50.0%
GTTTGGAAGATTGGAGGGGA+CGG - chr8.4:21695567-21695586 None:intergenic 50.0%
TAGGAACCCTATGAGCTGGT+TGG + chr8.4:21695715-21695734 MS.gene011370:intron 50.0%
TATGAAAGTGGGGGGGTTGT+CGG + chr8.4:21697182-21697201 MS.gene011370:CDS 50.0%
TCAGCTCCCTTGGAAGATTC+CGG - chr8.4:21696138-21696157 None:intergenic 50.0%
TCCACAAGTTCTGCATGGTG+TGG - chr8.4:21696198-21696217 None:intergenic 50.0%
TCCACACCATGCAGAACTTG+TGG + chr8.4:21696194-21696213 MS.gene011370:CDS 50.0%
TCCCCAAGTCACGAATACAC+TGG - chr8.4:21697217-21697236 None:intergenic 50.0%
TCTGGACATACCAAACGCCA+AGG + chr8.4:21697406-21697425 MS.gene011370:CDS 50.0%
TGTGCTTGCCCCATTGAACT+TGG + chr8.4:21696986-21697005 MS.gene011370:CDS 50.0%
TTTGGAAGATTGGAGGGGAC+GGG - chr8.4:21695566-21695585 None:intergenic 50.0%
! CCCATTTTCACCAGCTGGAT+TGG - chr8.4:21696607-21696626 None:intergenic 50.0%
! CGCATTCTGGAAAGTTAGGG+CGG + chr8.4:21694058-21694077 MS.gene011370:CDS 50.0%
! CGGTCGCATTCTGGAAAGTT+AGG + chr8.4:21694054-21694073 MS.gene011370:CDS 50.0%
! GCATTCTGGAAAGTTAGGGC+GGG + chr8.4:21694059-21694078 MS.gene011370:CDS 50.0%
! GCGACTTGTTTCCATGGCAA+TGG + chr8.4:21695882-21695901 MS.gene011370:CDS 50.0%
! TGGAGGAGTATGAAAGTGGG+GGG + chr8.4:21697174-21697193 MS.gene011370:CDS 50.0%
!! AAAGTTAGGGCGGGCTAAGA+AGG + chr8.4:21694068-21694087 MS.gene011370:CDS 50.0%
!! AAGTTAGGGCGGGCTAAGAA+GGG + chr8.4:21694069-21694088 MS.gene011370:CDS 50.0%
!! TAGGATGCTGGATTTGCTGC+AGG + chr8.4:21697301-21697320 MS.gene011370:CDS 50.0%
!! TCAGCTGATTGGTGGTGATG+AGG - chr8.4:21697343-21697362 None:intergenic 50.0%
!! TTCACCAGCTGGATTGGCAA+AGG - chr8.4:21696601-21696620 None:intergenic 50.0%
AGACTGCTGGGATTGCTGTG+AGG + chr8.4:21694022-21694041 MS.gene011370:CDS 55.0%
AGCAATGTCGACGGCGACTT+AGG - chr8.4:21693958-21693977 None:intergenic 55.0%
AGGCTATTGAGATGCTGGGG+CGG + chr8.4:21697101-21697120 MS.gene011370:CDS 55.0%
ATTGGAGGGGACGGGATTAG+AGG - chr8.4:21695558-21695577 None:intergenic 55.0%
CAAAGCTCCTGCTGGTGGTA+AGG + chr8.4:21693996-21694015 MS.gene011370:CDS 55.0%
CACATCAAAGCTCCTGCTGG+TGG + chr8.4:21693991-21694010 MS.gene011370:CDS 55.0%
CATCAACAACAGCACGTGCC+AGG - chr8.4:21696071-21696090 None:intergenic 55.0%
CTCTCTTCTGCTCGTCATGC+AGG + chr8.4:21697074-21697093 MS.gene011370:CDS 55.0%
CTGCTCGTCATGCAGGTGAA+AGG + chr8.4:21697081-21697100 MS.gene011370:CDS 55.0%
CTTCCCATCATTCCCAAGGG+TGG + chr8.4:21694887-21694906 MS.gene011370:intron 55.0%
CTTCCTTGCCCTGGCAAGAA+AGG - chr8.4:21696109-21696128 None:intergenic 55.0%
CTTGACTACCTCAGCTCCCT+TGG - chr8.4:21696148-21696167 None:intergenic 55.0%
CTTGTGGAAAGACGATGGGG+TGG + chr8.4:21696210-21696229 MS.gene011370:CDS 55.0%
CTTGTGGATGCAGATGGTGC+TGG + chr8.4:21695299-21695318 MS.gene011370:intron 55.0%
CTTTCTTGCCAGGGCAAGGA+AGG + chr8.4:21696107-21696126 MS.gene011370:CDS 55.0%
GCGAGACACTTGAAGCCTGT+AGG + chr8.4:21696304-21696323 MS.gene011370:CDS 55.0%
GCTTCCTTTGCCAATCCAGC+TGG + chr8.4:21696594-21696613 MS.gene011370:CDS 55.0%
GGAATCTTCCAAGGGAGCTG+AGG + chr8.4:21696137-21696156 MS.gene011370:CDS 55.0%
GGCTCTTCCGGAATCTTCCA+AGG + chr8.4:21696128-21696147 MS.gene011370:CDS 55.0%
GTGGAGCATGCACAGACCAA+GGG + chr8.4:21697446-21697465 MS.gene011370:CDS 55.0%
GTGGTAAGGCACAGACTGCT+GGG + chr8.4:21694010-21694029 MS.gene011370:CDS 55.0%
TCCACCAGCCTTTCTTGCCA+GGG + chr8.4:21696098-21696117 MS.gene011370:CDS 55.0%
TGATGGTAGAAGCCACCCCT+TGG - chr8.4:21697465-21697484 None:intergenic 55.0%
TGGAGCATGCACAGACCAAG+GGG + chr8.4:21697447-21697466 MS.gene011370:CDS 55.0%
TGTGGAGCATGCACAGACCA+AGG + chr8.4:21697445-21697464 MS.gene011370:CDS 55.0%
TTCCACCAGCCTTTCTTGCC+AGG + chr8.4:21696097-21696116 MS.gene011370:CDS 55.0%
TTGCTGTGAGGCATGTGCGT+CGG + chr8.4:21694034-21694053 MS.gene011370:CDS 55.0%
TTGGAGGGGACGGGATTAGA+GGG - chr8.4:21695557-21695576 None:intergenic 55.0%
! ATGGGCTGTGGAGGATGCTA+AGG + chr8.4:21697133-21697152 MS.gene011370:CDS 55.0%
! GGAGGAGTATGAAAGTGGGG+GGG + chr8.4:21697175-21697194 MS.gene011370:CDS 55.0%
! GGGTCTTGATGATCTGGCTC+TGG + chr8.4:21697388-21697407 MS.gene011370:CDS 55.0%
!! CTGCAGGAGTGCTTCAGTGA+AGG + chr8.4:21697317-21697336 MS.gene011370:CDS 55.0%
!! GCAGATGGTGCTGGTGGTAA+GGG + chr8.4:21695308-21695327 MS.gene011370:intron 55.0%
!! TGCAGATGGTGCTGGTGGTA+AGG + chr8.4:21695307-21695326 MS.gene011370:intron 55.0%
!! TGCTGGTGGTAAGGGCACTT+GGG + chr8.4:21695316-21695335 MS.gene011370:CDS 55.0%
AGCATGCACAGACCAAGGGG+TGG + chr8.4:21697450-21697469 MS.gene011370:CDS 60.0%
CAGCCTTTCTTGCCAGGGCA+AGG + chr8.4:21696103-21696122 MS.gene011370:CDS 60.0%
CAGGGCAAGGAAGGCTCTTC+CGG + chr8.4:21696116-21696135 MS.gene011370:CDS 60.0%
CGAGGTTGTGAAGAAGGCCC+TGG + chr8.4:21696362-21696381 MS.gene011370:CDS 60.0%
CTATTGAGATGCTGGGGCGG+GGG + chr8.4:21697104-21697123 MS.gene011370:CDS 60.0%
CTTGCCCTGGCAAGAAAGGC+TGG - chr8.4:21696105-21696124 None:intergenic 60.0%
GAAGGCCCTGGTACTTGCCA+TGG + chr8.4:21696374-21696393 MS.gene011370:CDS 60.0%
GCTATTGAGATGCTGGGGCG+GGG + chr8.4:21697103-21697122 MS.gene011370:CDS 60.0%
GGCTATTGAGATGCTGGGGC+GGG + chr8.4:21697102-21697121 MS.gene011370:CDS 60.0%
GGGCACTTGGGGGAAATTGC+TGG + chr8.4:21695328-21695347 MS.gene011370:CDS 60.0%
GGTGGTAAGGCACAGACTGC+TGG + chr8.4:21694009-21694028 MS.gene011370:CDS 60.0%
GTCTGTGCCTTACCACCAGC+AGG - chr8.4:21694006-21694025 None:intergenic 60.0%
! CATGTGCGTCGGTCGCATTC+TGG + chr8.4:21694045-21694064 MS.gene011370:CDS 60.0%
! GTGGATGCAGATGGTGCTGG+TGG + chr8.4:21695302-21695321 MS.gene011370:intron 60.0%
!! CTGGTGGTAAGGGCACTTGG+GGG + chr8.4:21695318-21695337 MS.gene011370:CDS 60.0%
!! GCTGGTGGTAAGGGCACTTG+GGG + chr8.4:21695317-21695336 MS.gene011370:CDS 60.0%
!! GTGCTGGTGGTAAGGGCACT+TGG + chr8.4:21695315-21695334 MS.gene011370:CDS 60.0%
CGGAAGAGCCTTCCTTGCCC+TGG - chr8.4:21696118-21696137 None:intergenic 65.0%
GCCCTGGCAAGAAAGGCTGG+TGG - chr8.4:21696102-21696121 None:intergenic 65.0%
!! GGGAACTGGATGGGCTGTGG+AGG + chr8.4:21697124-21697143 MS.gene011370:CDS 65.0%
AGATGCTGGGGCGGGGGAAC+TGG + chr8.4:21697110-21697129 MS.gene011370:CDS 70.0%
CTGGGGCGGGGGAACTGGAT+GGG + chr8.4:21697115-21697134 MS.gene011370:CDS 70.0%
!! CGGGGGAACTGGATGGGCTG+TGG + chr8.4:21697121-21697140 MS.gene011370:CDS 70.0%
GCTGGGGCGGGGGAACTGGA+TGG + chr8.4:21697114-21697133 MS.gene011370:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 21693868 21697511 21693868 ID=MS.gene011370
chr8.4 mRNA 21693868 21697511 21693868 ID=MS.gene011370.t1;Parent=MS.gene011370
chr8.4 exon 21693868 21694090 21693868 ID=MS.gene011370.t1.exon1;Parent=MS.gene011370.t1
chr8.4 CDS 21693868 21694090 21693868 ID=cds.MS.gene011370.t1;Parent=MS.gene011370.t1
chr8.4 exon 21695312 21695406 21695312 ID=MS.gene011370.t1.exon2;Parent=MS.gene011370.t1
chr8.4 CDS 21695312 21695406 21695312 ID=cds.MS.gene011370.t1;Parent=MS.gene011370.t1
chr8.4 exon 21695718 21697511 21695718 ID=MS.gene011370.t1.exon3;Parent=MS.gene011370.t1
chr8.4 CDS 21695718 21697511 21695718 ID=cds.MS.gene011370.t1;Parent=MS.gene011370.t1
Gene Sequence

>MS.gene011370

ATGGCGTCGAACGAGGGATTTTTGACTGAAGGACAGAGGGAGATGTTGAAAATTGCGAGTCAGAACGCTGAGAATTTGTCGTCGTCGCCTAAGTCGCCGTCGACATTGCTTGCTGATCATCATCACATCAAAGCTCCTGCTGGTGGTAAGGCACAGACTGCTGGGATTGCTGTGAGGCATGTGCGTCGGTCGCATTCTGGAAAGTTAGGGCGGGCTAAGAAGGGTGAGTTGTGTGTTCTTTGGATATTTTATTTTGAATTGATTCTATATGCTATGCTGTGGTTATTGTTGTTACGTTCGTAAGCTGTAGTATTTTTACTTAGGCTGTTGGATTTCTTGAAAAGGTTTTAGAAGAAAGACTTTTGAGAAGGAATATAATATAGTATATATTTAGATGAATAGGTGATAGATTAGGATTTTCGAAGTTTATTCGGGACTAAGTTGATCGCTGCGATAAGAAAATTTTAAGTATTACTTTATTTCGTCTTTTGCGGCTAATGGCTTTTTTGCAATGGAAAATATTTCGTTTTGATTAAATGTTTGCTCAGTTATTGTTTCTGATAAATGTGGAATTATTTGATGTTATTATTAAATGATGATTTTGCTGTAGTCGATCAGCCTCCTCAATCAATTAGAACTGATAGGTTGAAGTTTTAATCAGCCAGATACGATACCACTTTTTAGGAAAATAATTTATACATATTAGTTATAACGGTAATCTGTGAATGATCGCATTTTCGGTATAGGTTCAAATTTTAATCAGCCAGATACAATACCACTTTTTAGGAAAATAATTTATACATATAAGTTATAACGGTAATCTGTGAATGATTGCATTTTCGGTATAGGTTGAAGTTTTAATCAGCCAGATACGATACCACTTTTTAGGAAAATAATTTATACATATAAGGTATAACGGTAATCTGTGAATGATTGCATTTTTGGTACATGGGCATTTTGTCGTAGTTGCATTTTCGGTACATGGGCATTTTGTCGTATTGGAGCACGAGAGCTGCTTTCTTCCCATCATTCCCAAGGGTGGAAAGTCATTCATTATTTCTGAAGGCAAAGCTGTGTAATCTTTGCCTAGTTTAGTTAACACTATTACCAACGAAAATGATTTTGCTTCCATGAAGCTAATCTTATTGATCATGAGGTACAGAGGTGGACATCAATGCAAAACAAGGCTGAAACTTCAATTGTTTTAAGAGTACAAATAATATTGCATTTACGTTTTAATTTTACCTAAATTTCTAGTAAATTCACTTGCACATATTATTTGGATAATTTTCATAAACTGGAGGACGAATGATAAGCTTCTAGATTTGATTTTTTTTTCCTTTCTCCCAAATTCAGGGCTAATATGTGATTGTTTGTTTACCAATTGTTTTTTTTAATGGTCTTCATGCGATAATAATCTACATTGGTCATCTTGTGGATGCAGATGGTGCTGGTGGTAAGGGCACTTGGGGGAAATTGCTGGACACAGAAATTGATTCTCACATAGACCGCAATGATCCAAATTATGATAGTGGCGAGGTGAAGTATTTTTTTATCATTCTGATTTTGTTGGCTGTTTCTATGTTGTTATAATACTCTTAAAACTAAAAATATATTAATTACAAGTTTCAATTTATCATTCTCTACAAACTATCTTAAAAAAAGATGGTAGATGTCTCTCTCTTTCCCTCTAATCCCGTCCCCTCCAATCTTCCAAACAGACCCATATTGTTAACTCTTCTGTACCTGTTGCCTGCTTTATTTTTTCCATTCTATCTTTCTCTTGTTGTAAATGAATTACATACATAAGCATATAACATGTTCTATTTGCATACTTTTGCATTTTATAGGAACCCTATGAGCTGGTTGGAACTACTGTTACTGACCCCTTGGATGAATTCAAGAAAGCAGTGGTATCCCTCATAGATGAATACTTCAGTAATGGGGATGTTGATTTGGCAGCATCTGACCTAAGAGAACTTGGCTCAAGTGAATATTATCCATACTTCATTAAGCGACTTGTTTCCATGGCAATGGACAGGCATGATAAGGAGAAAGAAATGGCTTCTGTTCTGCTTTCAGCACTGTATGCTGATGTCATTAGTCCCACACAGATTAGGGATGGATTTTTTATGCTTATTGAATCTGCTGATGATCTTGCAGTGGATATCCTGGATGCAGTTGACATCCTTGCTTTATTCCTGGCACGTGCTGTTGTTGATGATATTCTTCCACCAGCCTTTCTTGCCAGGGCAAGGAAGGCTCTTCCGGAATCTTCCAAGGGAGCTGAGGTAGTCAAGACTGCCGAGAAGAGCTATCTCTCAGCTCCACACCATGCAGAACTTGTGGAAAGACGATGGGGTGGTAGCACTCACATTACTGTTGAAGAAATGAAGAAAAAGATTGCTGATTTACTTAAAGAATATGTTGATAGTGGCGAGACACTTGAAGCCTGTAGGTGTATACGTGAGTTGGGAGTTGCATTCTTCCATCACGAGGTTGTGAAGAAGGCCCTGGTACTTGCCATGGAGATTCCTTCAGCAGAACCTTTACTGTTGAAGCTGTTAAAAGAAGCAGCAGCAGAAGGACTGATTAGTTCCAGCCAAATGGTGAAAGGGTTTTCTCGATTGGAAGAAGGCCTAGATGATCTTGCTCTTGATATTCCATCAGCTAAAGCCTTGTTTCAGTCATTTGTCCCCAAGGCAATATCTGAAGGATGGCTTGATGCTTCCTTTGCCAATCCAGCTGGTGAAAATGGGGAATTCCAAGTTGAAGATGAGAATGTGAGGAAGTACAAAAAGGAAGCTGTAACTATAATTCATGAGTATTTTCTCTCTGATGACATTCCTGAACTCATTCGAAGCCTAGAAGATCTTGGAGCACCTGAGTATAACCCAATATTTTTGAAGAGGTTAATAACACTTGCTTTGGACCGAAAGAACAGAGAAAAGGAAATGGCATCTGTCCTGCTATCTGCACTTCATATAGAGATATTCTCAACAGAGGATATTGTTAATGGTTTTGTCATGCTTCTGGAAAATGCTGAAGATACAACGCTGGATATACTGGATGCTTCAAATGAGCTTGCTCTGTTTTTAGCTCGGGCTGTGATTGATGATGTGCTTGCCCCATTGAACTTGGATGAAATTGGCAGCAGACTACCACCAAAATGCAGTGGTAGTGAAACTGTGCGTATGGCTCGAACACTCTCTTCTGCTCGTCATGCAGGTGAAAGGCTATTGAGATGCTGGGGCGGGGGAACTGGATGGGCTGTGGAGGATGCTAAGGACAAGATCACAAAGCTCTTGGAGGAGTATGAAAGTGGGGGGGTTGTCGGTGAAGCATGCCAGTGTATTCGTGACTTGGGGATGCCTTTCTTCAACCATGAGGTAGTGAAGAAAGCTTTGGTTATGGCCATGGAGAAGAAGAATGATAGGATGCTGGATTTGCTGCAGGAGTGCTTCAGTGAAGGCCTCATCACCACCAATCAGCTGACTAAAGGATTCACCCGGATTAAGGAGGGTCTTGATGATCTGGCTCTGGACATACCAAACGCCAAGGAAAAATTTGCTTTCTATGTGGAGCATGCACAGACCAAGGGGTGGCTTCTACCATCATTTGATTCCTCTGCCCCAGATGTCTAG

Protein sequence

>MS.gene011370.t1

MASNEGFLTEGQREMLKIASQNAENLSSSPKSPSTLLADHHHIKAPAGGKAQTAGIAVRHVRRSHSGKLGRAKKDGAGGKGTWGKLLDTEIDSHIDRNDPNYDSGEEPYELVGTTVTDPLDEFKKAVVSLIDEYFSNGDVDLAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPTQIRDGFFMLIESADDLAVDILDAVDILALFLARAVVDDILPPAFLARARKALPESSKGAEVVKTAEKSYLSAPHHAELVERRWGGSTHITVEEMKKKIADLLKEYVDSGETLEACRCIRELGVAFFHHEVVKKALVLAMEIPSAEPLLLKLLKEAAAEGLISSSQMVKGFSRLEEGLDDLALDIPSAKALFQSFVPKAISEGWLDASFANPAGENGEFQVEDENVRKYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEYNPIFLKRLITLALDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLENAEDTTLDILDASNELALFLARAVIDDVLAPLNLDEIGSRLPPKCSGSETVRMARTLSSARHAGERLLRCWGGGTGWAVEDAKDKITKLLEEYESGGVVGEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITTNQLTKGFTRIKEGLDDLALDIPNAKEKFAFYVEHAQTKGWLLPSFDSSAPDV