Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011370.t1 | XP_003608913.2 | 99 | 703 | 7 | 0 | 1 | 703 | 1 | 703 | 0.00E+00 | 1303.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011370.t1 | Q94BR1 | 72.5 | 702 | 189 | 4 | 1 | 700 | 1 | 700 | 5.3e-287 | 988.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011370.t1 | G7JNQ7 | 99.0 | 703 | 7 | 0 | 1 | 703 | 1 | 703 | 0.0e+00 | 1303.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene03401 | MS.gene011370 | PPI |
MS.gene03402 | MS.gene011370 | PPI |
MS.gene08021 | MS.gene011370 | PPI |
MS.gene52894 | MS.gene011370 | PPI |
MS.gene011370 | MS.gene85798 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011370.t1 | MTR_4g104360 | 99.147 | 703 | 6 | 0 | 1 | 703 | 1 | 703 | 0.0 | 1422 |
MS.gene011370.t1 | MTR_6g034560 | 54.161 | 709 | 302 | 7 | 1 | 696 | 1 | 699 | 0.0 | 702 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene011370.t1 | AT5G63190 | 75.356 | 702 | 169 | 4 | 1 | 700 | 1 | 700 | 0.0 | 1065 |
MS.gene011370.t1 | AT5G63190 | 75.356 | 702 | 169 | 4 | 1 | 700 | 1 | 700 | 0.0 | 1065 |
MS.gene011370.t1 | AT4G24800 | 74.856 | 696 | 171 | 3 | 5 | 699 | 2 | 694 | 0.0 | 1025 |
MS.gene011370.t1 | AT4G24800 | 74.856 | 696 | 171 | 3 | 5 | 699 | 2 | 694 | 0.0 | 1025 |
MS.gene011370.t1 | AT4G24800 | 74.856 | 696 | 171 | 3 | 5 | 699 | 2 | 694 | 0.0 | 1025 |
MS.gene011370.t1 | AT4G24800 | 74.856 | 696 | 171 | 3 | 5 | 699 | 2 | 694 | 0.0 | 1025 |
MS.gene011370.t1 | AT3G48390 | 72.442 | 606 | 162 | 2 | 96 | 700 | 30 | 631 | 0.0 | 904 |
MS.gene011370.t1 | AT1G22730 | 50.156 | 642 | 284 | 9 | 78 | 698 | 51 | 677 | 0.0 | 603 |
Find 202 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCCAATCCAGCTGGTGAAAA+TGG | 0.176893 | 8.4:+21696603 | MS.gene011370:CDS |
ACCTCGCCACTATCATAATT+TGG | 0.193734 | 8.4:-21695386 | None:intergenic |
TCAACAGAGGATATTGTTAA+TGG | 0.233545 | 8.4:+21696864 | MS.gene011370:CDS |
GTTTCACTACCACTGCATTT+TGG | 0.266094 | 8.4:-21697032 | None:intergenic |
GTGCTGGTGGTAAGGGCACT+TGG | 0.296945 | 8.4:+21695315 | MS.gene011370:CDS |
CAGTAATGGGGATGTTGATT+TGG | 0.304435 | 8.4:+21695804 | MS.gene011370:CDS |
CATGTGCGTCGGTCGCATTC+TGG | 0.309681 | 8.4:+21694045 | MS.gene011370:CDS |
CGGTCGCATTCTGGAAAGTT+AGG | 0.310044 | 8.4:+21694054 | MS.gene011370:CDS |
TAAAGGATTCACCCGGATTA+AGG | 0.323279 | 8.4:+21697364 | MS.gene011370:CDS |
TTCCACCAGCCTTTCTTGCC+AGG | 0.329884 | 8.4:+21696097 | MS.gene011370:CDS |
TGACATCCTTGCTTTATTCC+TGG | 0.334192 | 8.4:+21696050 | MS.gene011370:CDS |
TAGATGAATACTTCAGTAAT+GGG | 0.339593 | 8.4:+21695791 | MS.gene011370:CDS |
TGCTGGTGGTAAGGGCACTT+GGG | 0.342359 | 8.4:+21695316 | MS.gene011370:CDS |
GAGGTTAATAACACTTGCTT+TGG | 0.344003 | 8.4:+21696776 | MS.gene011370:CDS |
ACAAGTCGCTTAATGAAGTA+TGG | 0.352741 | 8.4:-21695868 | None:intergenic |
CAGGGCAAGGAAGGCTCTTC+CGG | 0.356489 | 8.4:+21696116 | MS.gene011370:CDS |
GCTGGTGGTAAGGGCACTTG+GGG | 0.362041 | 8.4:+21695317 | MS.gene011370:CDS |
CACTTGAGCCAAGTTCTCTT+AGG | 0.362449 | 8.4:-21695837 | None:intergenic |
AGATACAACGCTGGATATAC+TGG | 0.366558 | 8.4:+21696914 | MS.gene011370:CDS |
CCATTGAACTTGGATGAAAT+TGG | 0.368898 | 8.4:+21696996 | MS.gene011370:CDS |
CATTAGTCCCACACAGATTA+GGG | 0.370644 | 8.4:+21695966 | MS.gene011370:CDS |
GGGTAGTTTAGCTAGACATC+TGG | 0.378154 | 8.4:-21697500 | None:intergenic |
CTTAAAGAATATGTTGATAG+TGG | 0.380631 | 8.4:+21696282 | MS.gene011370:CDS |
TCATTAGTCCCACACAGATT+AGG | 0.381188 | 8.4:+21695965 | MS.gene011370:CDS |
AGTAGTTCCAACCAGCTCAT+AGG | 0.384481 | 8.4:-21695722 | None:intergenic |
GAATGTGAGGAAGTACAAAA+AGG | 0.386583 | 8.4:+21696647 | MS.gene011370:CDS |
TCTAGGCTTCGAATGAGTTC+AGG | 0.390486 | 8.4:-21696714 | None:intergenic |
CCAATCCAGCTGGTGAAAAT+GGG | 0.390549 | 8.4:+21696604 | MS.gene011370:CDS |
GGCTATTGAGATGCTGGGGC+GGG | 0.391205 | 8.4:+21697102 | MS.gene011370:CDS |
CATCAAGACCCTCCTTAATC+CGG | 0.394068 | 8.4:-21697376 | None:intergenic |
GAGAAAACCCTTTCACCATT+TGG | 0.394077 | 8.4:-21696470 | None:intergenic |
CCAATTTCATCCAAGTTCAA+TGG | 0.400298 | 8.4:-21696996 | None:intergenic |
GTGAAAGGCTATTGAGATGC+TGG | 0.406948 | 8.4:+21697096 | MS.gene011370:CDS |
CTTCCTTGCCCTGGCAAGAA+AGG | 0.407487 | 8.4:-21696106 | None:intergenic |
CATCCTTCAGATATTGCCTT+GGG | 0.409887 | 8.4:-21696564 | None:intergenic |
GGGAACTGGATGGGCTGTGG+AGG | 0.411357 | 8.4:+21697124 | MS.gene011370:CDS |
CAATTTCATCCAAGTTCAAT+GGG | 0.413224 | 8.4:-21696995 | None:intergenic |
TCAGCTCCCTTGGAAGATTC+CGG | 0.416092 | 8.4:-21696135 | None:intergenic |
CTTGCCCTGGCAAGAAAGGC+TGG | 0.425041 | 8.4:-21696102 | None:intergenic |
AAAGTTAGGGCGGGCTAAGA+AGG | 0.432147 | 8.4:+21694068 | MS.gene011370:CDS |
TAAGGAGGGTCTTGATGATC+TGG | 0.435168 | 8.4:+21697382 | MS.gene011370:CDS |
GGTGGTAAGGCACAGACTGC+TGG | 0.438468 | 8.4:+21694009 | MS.gene011370:CDS |
CAGGTGCTCCAAGATCTTCT+AGG | 0.438853 | 8.4:-21696731 | None:intergenic |
CTTGACTACCTCAGCTCCCT+TGG | 0.439299 | 8.4:-21696145 | None:intergenic |
AAACCCTTTCACCATTTGGC+TGG | 0.441435 | 8.4:-21696466 | None:intergenic |
TGCAGATGGTGCTGGTGGTA+AGG | 0.445986 | 8.4:+21695307 | MS.gene011370:intron |
CCATGGAGAAGAAGAATGAT+AGG | 0.451295 | 8.4:+21697282 | MS.gene011370:CDS |
CTCTCTTCTGCTCGTCATGC+AGG | 0.451990 | 8.4:+21697074 | MS.gene011370:CDS |
TTTAACAGCTTCAACAGTAA+AGG | 0.452533 | 8.4:-21696414 | None:intergenic |
ATTCGAAGCCTAGAAGATCT+TGG | 0.457110 | 8.4:+21696723 | MS.gene011370:CDS |
TACTGAAGTATTCATCTATG+AGG | 0.457447 | 8.4:-21695786 | None:intergenic |
AATGATCCAAATTATGATAG+TGG | 0.464061 | 8.4:+21695380 | MS.gene011370:CDS |
AACTACTGTTACTGACCCCT+TGG | 0.468009 | 8.4:+21695738 | MS.gene011370:CDS |
GCTTCCTTTGCCAATCCAGC+TGG | 0.468039 | 8.4:+21696594 | MS.gene011370:CDS |
AGTGAAGAAAGCTTTGGTTA+TGG | 0.470878 | 8.4:+21697259 | MS.gene011370:CDS |
CTTTCTTGCCAGGGCAAGGA+AGG | 0.472429 | 8.4:+21696107 | MS.gene011370:CDS |
GAATCTCCATGGCAAGTACC+AGG | 0.474177 | 8.4:-21696380 | None:intergenic |
TCACATTCTCATCTTCAACT+TGG | 0.474950 | 8.4:-21696632 | None:intergenic |
TGTGCTTGCCCCATTGAACT+TGG | 0.476996 | 8.4:+21696986 | MS.gene011370:CDS |
CAAAGCTCCTGCTGGTGGTA+AGG | 0.478498 | 8.4:+21693996 | MS.gene011370:CDS |
GGGTCTTGATGATCTGGCTC+TGG | 0.479384 | 8.4:+21697388 | MS.gene011370:CDS |
GCTATTGAGATGCTGGGGCG+GGG | 0.479576 | 8.4:+21697103 | MS.gene011370:CDS |
GGCAATGGACAGGCATGATA+AGG | 0.480888 | 8.4:+21695897 | MS.gene011370:CDS |
CCATCACGAGGTTGTGAAGA+AGG | 0.481692 | 8.4:+21696356 | MS.gene011370:CDS |
GCAGATGGTGCTGGTGGTAA+GGG | 0.484044 | 8.4:+21695308 | MS.gene011370:intron |
TGCCAGTGTATTCGTGACTT+GGG | 0.484187 | 8.4:+21697212 | MS.gene011370:CDS |
CGGAAGAGCCTTCCTTGCCC+TGG | 0.485045 | 8.4:-21696115 | None:intergenic |
TCCACCAGCCTTTCTTGCCA+GGG | 0.488180 | 8.4:+21696098 | MS.gene011370:CDS |
TGCTTTCTTGAATTCATCCA+AGG | 0.489968 | 8.4:-21695755 | None:intergenic |
TGAGGTAGTGAAGAAAGCTT+TGG | 0.490667 | 8.4:+21697253 | MS.gene011370:CDS |
GCGACTTGTTTCCATGGCAA+TGG | 0.493441 | 8.4:+21695882 | MS.gene011370:CDS |
GAATCCTTTAGTCAGCTGAT+TGG | 0.493942 | 8.4:-21697351 | None:intergenic |
TGATCTTGCAGTGGATATCC+TGG | 0.494069 | 8.4:+21696020 | MS.gene011370:CDS |
GAAAGCTTTGGTTATGGCCA+TGG | 0.496815 | 8.4:+21697265 | MS.gene011370:CDS |
GGTCGCATTCTGGAAAGTTA+GGG | 0.496864 | 8.4:+21694055 | MS.gene011370:CDS |
CTGCAGGAGTGCTTCAGTGA+AGG | 0.497405 | 8.4:+21697317 | MS.gene011370:CDS |
CCTATCATTCTTCTTCTCCA+TGG | 0.499101 | 8.4:-21697282 | None:intergenic |
ATGCCAGTGTATTCGTGACT+TGG | 0.499296 | 8.4:+21697211 | MS.gene011370:CDS |
GAAGAAGAATGATAGGATGC+TGG | 0.500749 | 8.4:+21697289 | MS.gene011370:CDS |
GGTAGTTTAGCTAGACATCT+GGG | 0.502037 | 8.4:-21697499 | None:intergenic |
GGACAAGATCACAAAGCTCT+TGG | 0.504142 | 8.4:+21697154 | MS.gene011370:CDS |
TTTATAGGAACCCTATGAGC+TGG | 0.506672 | 8.4:+21695711 | MS.gene011370:intron |
AAAGAACAGAGAAAAGGAAA+TGG | 0.507361 | 8.4:+21696803 | MS.gene011370:CDS |
CAGCCTTTCTTGCCAGGGCA+AGG | 0.508041 | 8.4:+21696103 | MS.gene011370:CDS |
GCATCTGACCTAAGAGAACT+TGG | 0.508510 | 8.4:+21695829 | MS.gene011370:CDS |
ATAGATGAATACTTCAGTAA+TGG | 0.511492 | 8.4:+21695790 | MS.gene011370:CDS |
TGTAGGTGTATACGTGAGTT+GGG | 0.511836 | 8.4:+21696321 | MS.gene011370:CDS |
TTGTTTCCATGGCAATGGAC+AGG | 0.512207 | 8.4:+21695887 | MS.gene011370:CDS |
GTAGTTCCAACCAGCTCATA+GGG | 0.512875 | 8.4:-21695721 | None:intergenic |
CTTGTGGATGCAGATGGTGC+TGG | 0.513272 | 8.4:+21695299 | MS.gene011370:intron |
TCCACAAGTTCTGCATGGTG+TGG | 0.514197 | 8.4:-21696195 | None:intergenic |
GTTCCAGCCAAATGGTGAAA+GGG | 0.516399 | 8.4:+21696463 | MS.gene011370:CDS |
ACTGATTAGTTCCAGCCAAA+TGG | 0.516854 | 8.4:+21696455 | MS.gene011370:CDS |
CAACTCACGTATACACCTAC+AGG | 0.516859 | 8.4:-21696319 | None:intergenic |
GGCTCTTCCGGAATCTTCCA+AGG | 0.517641 | 8.4:+21696128 | MS.gene011370:CDS |
GCATGATAAGGAGAAAGAAA+TGG | 0.518042 | 8.4:+21695909 | MS.gene011370:CDS |
AACAGTAAAGGTTCTGCTGA+AGG | 0.520154 | 8.4:-21696402 | None:intergenic |
CTATATGAAGTGCAGATAGC+AGG | 0.521385 | 8.4:-21696833 | None:intergenic |
CCATCCTTCAGATATTGCCT+TGG | 0.522923 | 8.4:-21696565 | None:intergenic |
AGCTGAGAGATAGCTCTTCT+CGG | 0.523111 | 8.4:-21696172 | None:intergenic |
TATCAAGAGCAAGATCATCT+AGG | 0.523207 | 8.4:-21696506 | None:intergenic |
GGACCGAAAGAACAGAGAAA+AGG | 0.523465 | 8.4:+21696797 | MS.gene011370:CDS |
CTATTGAGATGCTGGGGCGG+GGG | 0.523618 | 8.4:+21697104 | MS.gene011370:CDS |
AGCAATGTCGACGGCGACTT+AGG | 0.524812 | 8.4:-21693955 | None:intergenic |
CTGTAGGTGTATACGTGAGT+TGG | 0.525164 | 8.4:+21696320 | MS.gene011370:CDS |
CTCTTGGAGGAGTATGAAAG+TGG | 0.525404 | 8.4:+21697170 | MS.gene011370:CDS |
CATCACATCAAAGCTCCTGC+TGG | 0.525516 | 8.4:+21693988 | MS.gene011370:CDS |
TAGCTAGACATCTGGGGCAG+AGG | 0.526140 | 8.4:-21697492 | None:intergenic |
CATTAAGCGACTTGTTTCCA+TGG | 0.528753 | 8.4:+21695876 | MS.gene011370:CDS |
TGAAACAAGGCTTTAGCTGA+TGG | 0.533442 | 8.4:-21696531 | None:intergenic |
TGAAAGGCTATTGAGATGCT+GGG | 0.533761 | 8.4:+21697097 | MS.gene011370:CDS |
GTGGTAAGGCACAGACTGCT+GGG | 0.533927 | 8.4:+21694010 | MS.gene011370:CDS |
GAAGGCCCTGGTACTTGCCA+TGG | 0.534434 | 8.4:+21696374 | MS.gene011370:CDS |
CAAGATCACAAAGCTCTTGG+AGG | 0.537964 | 8.4:+21697157 | MS.gene011370:CDS |
CAAGGATGTCAACTGCATCC+AGG | 0.537979 | 8.4:-21696038 | None:intergenic |
GTTTCAGTCATTTGTCCCCA+AGG | 0.538145 | 8.4:+21696548 | MS.gene011370:CDS |
GCTTTCTTGAATTCATCCAA+GGG | 0.546570 | 8.4:-21695754 | None:intergenic |
ATCAAGACCCTCCTTAATCC+GGG | 0.549632 | 8.4:-21697375 | None:intergenic |
TCCTTTAGTCAGCTGATTGG+TGG | 0.549699 | 8.4:-21697348 | None:intergenic |
TTAAAAGAAGCAGCAGCAGA+AGG | 0.550137 | 8.4:+21696432 | MS.gene011370:CDS |
AGTTCCAGCCAAATGGTGAA+AGG | 0.550968 | 8.4:+21696462 | MS.gene011370:CDS |
AGGCTATTGAGATGCTGGGG+CGG | 0.551446 | 8.4:+21697101 | MS.gene011370:CDS |
CGCATTCTGGAAAGTTAGGG+CGG | 0.554864 | 8.4:+21694058 | MS.gene011370:CDS |
TTCACCAGCTGGATTGGCAA+AGG | 0.554928 | 8.4:-21696598 | None:intergenic |
GGGGAAATGGCGTCGAACGA+GGG | 0.561534 | 8.4:+21693862 | None:intergenic |
ACCACCAATCAGCTGACTAA+AGG | 0.562228 | 8.4:+21697347 | MS.gene011370:CDS |
ATGGGCTGTGGAGGATGCTA+AGG | 0.562248 | 8.4:+21697133 | MS.gene011370:CDS |
GTCTGTGCCTTACCACCAGC+AGG | 0.563393 | 8.4:-21694003 | None:intergenic |
ACTACCTCATGGTTGAAGAA+AGG | 0.564053 | 8.4:-21697239 | None:intergenic |
AAGTTAGGGCGGGCTAAGAA+GGG | 0.565574 | 8.4:+21694069 | MS.gene011370:CDS |
CCTTCTTCACAACCTCGTGA+TGG | 0.565630 | 8.4:-21696356 | None:intergenic |
CTGGTGGTAAGGGCACTTGG+GGG | 0.567812 | 8.4:+21695318 | MS.gene011370:CDS |
AAGCTTTCTTCACTACCTCA+TGG | 0.568149 | 8.4:-21697250 | None:intergenic |
TGATGGTAGAAGCCACCCCT+TGG | 0.570649 | 8.4:-21697462 | None:intergenic |
TAGGAACCCTATGAGCTGGT+TGG | 0.572366 | 8.4:+21695715 | MS.gene011370:intron |
CATCAACAACAGCACGTGCC+AGG | 0.573372 | 8.4:-21696068 | None:intergenic |
CTGCTCGTCATGCAGGTGAA+AGG | 0.573520 | 8.4:+21697081 | MS.gene011370:CDS |
TGGGGAAATGGCGTCGAACG+AGG | 0.577450 | 8.4:+21693861 | None:intergenic |
GTCTTTCCACAAGTTCTGCA+TGG | 0.577504 | 8.4:-21696200 | None:intergenic |
GTGGAGCATGCACAGACCAA+GGG | 0.578585 | 8.4:+21697446 | MS.gene011370:CDS |
AATCCATCCCTAATCTGTGT+GGG | 0.579210 | 8.4:-21695973 | None:intergenic |
TGGTAGTGAAACTGTGCGTA+TGG | 0.580211 | 8.4:+21697043 | MS.gene011370:CDS |
CGAGGTTGTGAAGAAGGCCC+TGG | 0.585050 | 8.4:+21696362 | MS.gene011370:CDS |
ATCATGCCTGTCCATTGCCA+TGG | 0.586529 | 8.4:-21695893 | None:intergenic |
AGTCCCACACAGATTAGGGA+TGG | 0.587668 | 8.4:+21695970 | MS.gene011370:CDS |
GTCCCCAAGGCAATATCTGA+AGG | 0.590596 | 8.4:+21696561 | MS.gene011370:CDS |
TCCACACCATGCAGAACTTG+TGG | 0.592118 | 8.4:+21696194 | MS.gene011370:CDS |
AGGATTCACCCGGATTAAGG+AGG | 0.594490 | 8.4:+21697367 | MS.gene011370:CDS |
ACTGAAGTATTCATCTATGA+GGG | 0.597331 | 8.4:-21695785 | None:intergenic |
TAGGATGCTGGATTTGCTGC+AGG | 0.597535 | 8.4:+21697301 | MS.gene011370:CDS |
TTCTGCTGAAGGAATCTCCA+TGG | 0.597635 | 8.4:-21696391 | None:intergenic |
CCAAGGCAATATCTGAAGGA+TGG | 0.597668 | 8.4:+21696565 | MS.gene011370:CDS |
CAGAACTTGTGGAAAGACGA+TGG | 0.601439 | 8.4:+21696205 | MS.gene011370:CDS |
TCAGCTGATTGGTGGTGATG+AGG | 0.602174 | 8.4:-21697340 | None:intergenic |
CAATCCAGCTGGTGAAAATG+GGG | 0.602846 | 8.4:+21696605 | MS.gene011370:CDS |
AAATCCATCCCTAATCTGTG+TGG | 0.607645 | 8.4:-21695974 | None:intergenic |
GGGGCAGAGGAATCAAATGA+TGG | 0.608075 | 8.4:-21697479 | None:intergenic |
CACATCAAAGCTCCTGCTGG+TGG | 0.608523 | 8.4:+21693991 | MS.gene011370:CDS |
GCATTCTGGAAAGTTAGGGC+GGG | 0.610221 | 8.4:+21694059 | MS.gene011370:CDS |
TGTGGAGCATGCACAGACCA+AGG | 0.614176 | 8.4:+21697445 | MS.gene011370:CDS |
GGATTCACCCGGATTAAGGA+GGG | 0.622780 | 8.4:+21697368 | MS.gene011370:CDS |
AGAACTTGTGGAAAGACGAT+GGG | 0.626205 | 8.4:+21696206 | MS.gene011370:CDS |
ATCTGCTGATGATCTTGCAG+TGG | 0.629980 | 8.4:+21696011 | MS.gene011370:CDS |
TATCATAATTTGGATCATTG+CGG | 0.630208 | 8.4:-21695376 | None:intergenic |
GCCAGTGTATTCGTGACTTG+GGG | 0.631751 | 8.4:+21697213 | MS.gene011370:CDS |
CTTTCTTGAATTCATCCAAG+GGG | 0.633512 | 8.4:-21695753 | None:intergenic |
AGTTGCATTCTTCCATCACG+AGG | 0.633964 | 8.4:+21696344 | MS.gene011370:CDS |
TTGCTGTGAGGCATGTGCGT+CGG | 0.634726 | 8.4:+21694034 | MS.gene011370:CDS |
TCTTGGAGGAGTATGAAAGT+GGG | 0.639560 | 8.4:+21697171 | MS.gene011370:CDS |
GCTCTTCCGGAATCTTCCAA+GGG | 0.641419 | 8.4:+21696129 | MS.gene011370:CDS |
AAATGCTGAAGATACAACGC+TGG | 0.642106 | 8.4:+21696905 | MS.gene011370:CDS |
GTGGATGCAGATGGTGCTGG+TGG | 0.644646 | 8.4:+21695302 | MS.gene011370:intron |
TATAGAGATATTCTCAACAG+AGG | 0.644683 | 8.4:+21696851 | MS.gene011370:CDS |
GGAATCTTCCAAGGGAGCTG+AGG | 0.644900 | 8.4:+21696137 | MS.gene011370:CDS |
CACGTGCCAGGAATAAAGCA+AGG | 0.649502 | 8.4:-21696056 | None:intergenic |
TGGAGGAGTATGAAAGTGGG+GGG | 0.649814 | 8.4:+21697174 | MS.gene011370:CDS |
TTGGAGGAGTATGAAAGTGG+GGG | 0.650081 | 8.4:+21697173 | MS.gene011370:CDS |
CTTGGAGGAGTATGAAAGTG+GGG | 0.653649 | 8.4:+21697172 | MS.gene011370:CDS |
AAGTTGAAGATGAGAATGTG+AGG | 0.655201 | 8.4:+21696634 | MS.gene011370:CDS |
GGGGACAAATGACTGAAACA+AGG | 0.656814 | 8.4:-21696544 | None:intergenic |
GGAGGAGTATGAAAGTGGGG+GGG | 0.657610 | 8.4:+21697175 | MS.gene011370:CDS |
TCTGGACATACCAAACGCCA+AGG | 0.659262 | 8.4:+21697406 | MS.gene011370:CDS |
GCCCTGGCAAGAAAGGCTGG+TGG | 0.659425 | 8.4:-21696099 | None:intergenic |
AGCATGCACAGACCAAGGGG+TGG | 0.663824 | 8.4:+21697450 | MS.gene011370:CDS |
AGCTGACTAAAGGATTCACC+CGG | 0.666003 | 8.4:+21697357 | MS.gene011370:CDS |
GGATGAATTCAAGAAAGCAG+TGG | 0.666447 | 8.4:+21695759 | MS.gene011370:CDS |
AGATGAATACTTCAGTAATG+GGG | 0.676923 | 8.4:+21695792 | MS.gene011370:CDS |
AATCTCCATGGCAAGTACCA+GGG | 0.677633 | 8.4:-21696379 | None:intergenic |
GAAAGGCTATTGAGATGCTG+GGG | 0.679754 | 8.4:+21697098 | MS.gene011370:CDS |
GCGAGACACTTGAAGCCTGT+AGG | 0.680196 | 8.4:+21696304 | MS.gene011370:CDS |
TGGAGCATGCACAGACCAAG+GGG | 0.681884 | 8.4:+21697447 | MS.gene011370:CDS |
TGATCAGCAAGCAATGTCGA+CGG | 0.684900 | 8.4:-21693964 | None:intergenic |
GTAGTTTAGCTAGACATCTG+GGG | 0.685216 | 8.4:-21697498 | None:intergenic |
CTTGTGGAAAGACGATGGGG+TGG | 0.687294 | 8.4:+21696210 | MS.gene011370:CDS |
TCCCCAAGTCACGAATACAC+TGG | 0.687638 | 8.4:-21697214 | None:intergenic |
ATCCTTCAGATATTGCCTTG+GGG | 0.691723 | 8.4:-21696563 | None:intergenic |
AGACTGCTGGGATTGCTGTG+AGG | 0.694684 | 8.4:+21694022 | MS.gene011370:CDS |
AGACTACCACCAAAATGCAG+TGG | 0.698145 | 8.4:+21697023 | MS.gene011370:CDS |
TCCAAATTATGATAGTGGCG+AGG | 0.698403 | 8.4:+21695385 | MS.gene011370:CDS |
GATGCCTTTCTTCAACCATG+AGG | 0.721876 | 8.4:+21697235 | MS.gene011370:CDS |
AATTTCATCCAAGTTCAATG+GGG | 0.741522 | 8.4:-21696994 | None:intergenic |
GAACTTGTGGAAAGACGATG+GGG | 0.755832 | 8.4:+21696207 | MS.gene011370:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAAAATAATTTATACATATA+AGG | + | chr8.4:21694654-21694673 | MS.gene011370:intron | 10.0% |
!! | TTTATACATATAAGTTATAA+CGG | + | chr8.4:21694662-21694681 | MS.gene011370:intron | 10.0% |
!! | TTTATACATATTAGTTATAA+CGG | + | chr8.4:21694560-21694579 | MS.gene011370:intron | 10.0% |
!! | TAGTATATATTTAGATGAAT+AGG | + | chr8.4:21694248-21694267 | MS.gene011370:intron | 15.0% |
!! | TTTATACATATAAGGTATAA+CGG | + | chr8.4:21694764-21694783 | MS.gene011370:intron | 15.0% |
!!! | TAAATTATTTTCCTAAAAAG+TGG | - | chr8.4:21694544-21694563 | None:intergenic | 15.0% |
!!! | TTACCAATTGTTTTTTTTAA+TGG | + | chr8.4:21695245-21695264 | MS.gene011370:intron | 15.0% |
!! | AGACCATTAAAAAAAACAAT+TGG | - | chr8.4:21695251-21695270 | None:intergenic | 20.0% |
!! | AGTGAATTTACTAGAAATTT+AGG | - | chr8.4:21695115-21695134 | None:intergenic | 20.0% |
!! | ATTAACCTCTTCAAAAATAT+TGG | - | chr8.4:21696765-21696784 | None:intergenic | 20.0% |
!! | CAAACTATCTTAAAAAAAGA+TGG | + | chr8.4:21695514-21695533 | MS.gene011370:intron | 20.0% |
!! | TTAACCTCTTCAAAAATATT+GGG | - | chr8.4:21696764-21696783 | None:intergenic | 20.0% |
!!! | TTTGGATAATTTTCATAAAC+TGG | + | chr8.4:21695146-21695165 | MS.gene011370:intron | 20.0% |
!!! | TTTTATCATTCTGATTTTGT+TGG | + | chr8.4:21695418-21695437 | MS.gene011370:intron | 20.0% |
! | AAAAATATTGGGTTATACTC+AGG | - | chr8.4:21696753-21696772 | None:intergenic | 25.0% |
! | AATGATCCAAATTATGATAG+TGG | + | chr8.4:21695380-21695399 | MS.gene011370:CDS | 25.0% |
! | ATAGATGAATACTTCAGTAA+TGG | + | chr8.4:21695790-21695809 | MS.gene011370:CDS | 25.0% |
! | ATTCACTTGCACATATTATT+TGG | + | chr8.4:21695128-21695147 | MS.gene011370:intron | 25.0% |
! | GTAATAGTGTTAACTAAACT+AGG | - | chr8.4:21694956-21694975 | None:intergenic | 25.0% |
! | TACAGAAGAGTTAACAATAT+GGG | - | chr8.4:21695593-21695612 | None:intergenic | 25.0% |
! | TAGAATGGAAAAAATAAAGC+AGG | - | chr8.4:21695623-21695642 | None:intergenic | 25.0% |
! | TAGATGAATACTTCAGTAAT+GGG | + | chr8.4:21695791-21695810 | MS.gene011370:CDS | 25.0% |
! | TATCATAATTTGGATCATTG+CGG | - | chr8.4:21695379-21695398 | None:intergenic | 25.0% |
!! | ATAGAAAGCAAATTTTTCCT+TGG | - | chr8.4:21697426-21697445 | None:intergenic | 25.0% |
!! | CTTAAAGAATATGTTGATAG+TGG | + | chr8.4:21696282-21696301 | MS.gene011370:CDS | 25.0% |
!! | TAGGATTTTCGAAGTTTATT+CGG | + | chr8.4:21694279-21694298 | MS.gene011370:intron | 25.0% |
!! | TGCATACTTTTGCATTTTAT+AGG | + | chr8.4:21695696-21695715 | MS.gene011370:intron | 25.0% |
!!! | AAGCTGTAGTATTTTTACTT+AGG | + | chr8.4:21694169-21694188 | MS.gene011370:intron | 25.0% |
!!! | AAGTCATTCATTATTTCTGA+AGG | + | chr8.4:21694911-21694930 | MS.gene011370:intron | 25.0% |
!!! | ATAACCCAATATTTTTGAAG+AGG | + | chr8.4:21696757-21696776 | MS.gene011370:CDS | 25.0% |
!!! | GTTATTGTTTCTGATAAATG+TGG | + | chr8.4:21694415-21694434 | MS.gene011370:intron | 25.0% |
!!! | TTACTTTATTTCGTCTTTTG+CGG | + | chr8.4:21694339-21694358 | MS.gene011370:intron | 25.0% |
AAAGAACAGAGAAAAGGAAA+TGG | + | chr8.4:21696803-21696822 | MS.gene011370:CDS | 30.0% | |
AATTTCATCCAAGTTCAATG+GGG | - | chr8.4:21696997-21697016 | None:intergenic | 30.0% | |
ACAACAAGAGAAAGATAGAA+TGG | - | chr8.4:21695638-21695657 | None:intergenic | 30.0% | |
AGATGAATACTTCAGTAATG+GGG | + | chr8.4:21695792-21695811 | MS.gene011370:CDS | 30.0% | |
AGATGAATAGGTGATAGATT+AGG | + | chr8.4:21694260-21694279 | MS.gene011370:intron | 30.0% | |
AGCTAATCTTATTGATCATG+AGG | + | chr8.4:21695002-21695021 | MS.gene011370:intron | 30.0% | |
CAATTTCATCCAAGTTCAAT+GGG | - | chr8.4:21696998-21697017 | None:intergenic | 30.0% | |
CATGCGATAATAATCTACAT+TGG | + | chr8.4:21695272-21695291 | MS.gene011370:intron | 30.0% | |
CTAAAAAGTGGTATTGTATC+TGG | - | chr8.4:21694634-21694653 | None:intergenic | 30.0% | |
CTCAATCAATTAGAACTGAT+AGG | + | chr8.4:21694490-21694509 | MS.gene011370:intron | 30.0% | |
GTACAGAAGAGTTAACAATA+TGG | - | chr8.4:21695594-21695613 | None:intergenic | 30.0% | |
TATAGAGATATTCTCAACAG+AGG | + | chr8.4:21696851-21696870 | MS.gene011370:CDS | 30.0% | |
TCAACAGAGGATATTGTTAA+TGG | + | chr8.4:21696864-21696883 | MS.gene011370:CDS | 30.0% | |
TTTAACAGCTTCAACAGTAA+AGG | - | chr8.4:21696417-21696436 | None:intergenic | 30.0% | |
! | AATGATTGCATTTTCGGTAT+AGG | + | chr8.4:21694694-21694713 | MS.gene011370:intron | 30.0% |
! | ACTGAAGTATTCATCTATGA+GGG | - | chr8.4:21695788-21695807 | None:intergenic | 30.0% |
! | AGGATTTTCGAAGTTTATTC+GGG | + | chr8.4:21694280-21694299 | MS.gene011370:intron | 30.0% |
! | CTATCAGTTCTAATTGATTG+AGG | - | chr8.4:21694492-21694511 | None:intergenic | 30.0% |
! | GGAAAAATTTGCTTTCTATG+TGG | + | chr8.4:21697427-21697446 | MS.gene011370:CDS | 30.0% |
! | GGATAATTTTCATAAACTGG+AGG | + | chr8.4:21695149-21695168 | MS.gene011370:intron | 30.0% |
! | TACTGAAGTATTCATCTATG+AGG | - | chr8.4:21695789-21695808 | None:intergenic | 30.0% |
! | TCTGTGAATGATTGCATTTT+CGG | + | chr8.4:21694688-21694707 | MS.gene011370:intron | 30.0% |
! | TCTGTGAATGATTGCATTTT+TGG | + | chr8.4:21694688-21694707 | MS.gene011370:intron | 30.0% |
! | TTTCCTTTTCTCTGTTCTTT+CGG | - | chr8.4:21696803-21696822 | None:intergenic | 30.0% |
! | TTTTGTCGTAGTTGCATTTT+CGG | + | chr8.4:21694823-21694842 | MS.gene011370:intron | 30.0% |
!! | AGTATTTTTACTTAGGCTGT+TGG | + | chr8.4:21694176-21694195 | MS.gene011370:intron | 30.0% |
!! | GATCAATAAGATTAGCTTCA+TGG | - | chr8.4:21694999-21695018 | None:intergenic | 30.0% |
!! | TAGAAGAAAGACTTTTGAGA+AGG | + | chr8.4:21694216-21694235 | MS.gene011370:intron | 30.0% |
!!! | ATGATTGCATTTTTGGTACA+TGG | + | chr8.4:21694797-21694816 | MS.gene011370:intron | 30.0% |
!!! | CAGATACAATACCACTTTTT+AGG | + | chr8.4:21694632-21694651 | MS.gene011370:intron | 30.0% |
!!! | TGATTGCATTTTTGGTACAT+GGG | + | chr8.4:21694798-21694817 | MS.gene011370:intron | 30.0% |
AAGTTGAAGATGAGAATGTG+AGG | + | chr8.4:21696634-21696653 | MS.gene011370:CDS | 35.0% | |
AATCTACATTGGTCATCTTG+TGG | + | chr8.4:21695283-21695302 | MS.gene011370:intron | 35.0% | |
ACAAGTCGCTTAATGAAGTA+TGG | - | chr8.4:21695871-21695890 | None:intergenic | 35.0% | |
CACATATTAGCCCTGAATTT+GGG | - | chr8.4:21695216-21695235 | None:intergenic | 35.0% | |
CCAATTTCATCCAAGTTCAA+TGG | - | chr8.4:21696999-21697018 | None:intergenic | 35.0% | |
CCATTGAACTTGGATGAAAT+TGG | + | chr8.4:21696996-21697015 | MS.gene011370:CDS | 35.0% | |
CTAAAAAGTGGTATCGTATC+TGG | - | chr8.4:21694532-21694551 | None:intergenic | 35.0% | |
CTTTCTTGAATTCATCCAAG+GGG | - | chr8.4:21695756-21695775 | None:intergenic | 35.0% | |
GAAAAAATAAAGCAGGCAAC+AGG | - | chr8.4:21695616-21695635 | None:intergenic | 35.0% | |
GAGGTTAATAACACTTGCTT+TGG | + | chr8.4:21696776-21696795 | MS.gene011370:CDS | 35.0% | |
GCATGATAAGGAGAAAGAAA+TGG | + | chr8.4:21695909-21695928 | MS.gene011370:CDS | 35.0% | |
GCTTTCTTGAATTCATCCAA+GGG | - | chr8.4:21695757-21695776 | None:intergenic | 35.0% | |
GTTAACAATATGGGTCTGTT+TGG | - | chr8.4:21695584-21695603 | None:intergenic | 35.0% | |
TATCAAGAGCAAGATCATCT+AGG | - | chr8.4:21696509-21696528 | None:intergenic | 35.0% | |
TCACATATTAGCCCTGAATT+TGG | - | chr8.4:21695217-21695236 | None:intergenic | 35.0% | |
TCACATTCTCATCTTCAACT+TGG | - | chr8.4:21696635-21696654 | None:intergenic | 35.0% | |
TGATTCTATATGCTATGCTG+TGG | + | chr8.4:21694127-21694146 | MS.gene011370:intron | 35.0% | |
TGCTTTCTTGAATTCATCCA+AGG | - | chr8.4:21695758-21695777 | None:intergenic | 35.0% | |
TTATTGATCATGAGGTACAG+AGG | + | chr8.4:21695010-21695029 | MS.gene011370:intron | 35.0% | |
TTTCCTTTCTCCCAAATTCA+GGG | + | chr8.4:21695203-21695222 | MS.gene011370:intron | 35.0% | |
! | AATGATCGCATTTTCGGTAT+AGG | + | chr8.4:21694592-21694611 | MS.gene011370:intron | 35.0% |
! | AGTGAAGAAAGCTTTGGTTA+TGG | + | chr8.4:21697259-21697278 | MS.gene011370:CDS | 35.0% |
! | GAATGTGAGGAAGTACAAAA+AGG | + | chr8.4:21696647-21696666 | MS.gene011370:CDS | 35.0% |
! | GGAAGCAAAATCATTTTCGT+TGG | - | chr8.4:21694978-21694997 | None:intergenic | 35.0% |
! | TAGTTGCATTTTCGGTACAT+GGG | + | chr8.4:21694831-21694850 | MS.gene011370:intron | 35.0% |
! | TCAGTTCTAATTGATTGAGG+AGG | - | chr8.4:21694489-21694508 | None:intergenic | 35.0% |
! | TCTGTGAATGATCGCATTTT+CGG | + | chr8.4:21694586-21694605 | MS.gene011370:intron | 35.0% |
! | TTTTCCTTTCTCCCAAATTC+AGG | + | chr8.4:21695202-21695221 | MS.gene011370:intron | 35.0% |
!! | ATTTTTGACTGAAGGACAGA+GGG | + | chr8.4:21693885-21693904 | MS.gene011370:CDS | 35.0% |
!!! | CAGATACGATACCACTTTTT+AGG | + | chr8.4:21694530-21694549 | MS.gene011370:intron | 35.0% |
!!! | TAATGGTTTTGTCATGCTTC+TGG | + | chr8.4:21696881-21696900 | MS.gene011370:CDS | 35.0% |
AAATCCATCCCTAATCTGTG+TGG | - | chr8.4:21695977-21695996 | None:intergenic | 40.0% | |
AAATGCTGAAGATACAACGC+TGG | + | chr8.4:21696905-21696924 | MS.gene011370:CDS | 40.0% | |
AACAGTAAAGGTTCTGCTGA+AGG | - | chr8.4:21696405-21696424 | None:intergenic | 40.0% | |
AAGCTTTCTTCACTACCTCA+TGG | - | chr8.4:21697253-21697272 | None:intergenic | 40.0% | |
AATCCATCCCTAATCTGTGT+GGG | - | chr8.4:21695976-21695995 | None:intergenic | 40.0% | |
AATGAATGACTTTCCACCCT+TGG | - | chr8.4:21694903-21694922 | None:intergenic | 40.0% | |
ACCTCGCCACTATCATAATT+TGG | - | chr8.4:21695389-21695408 | None:intergenic | 40.0% | |
ACTACCTCATGGTTGAAGAA+AGG | - | chr8.4:21697242-21697261 | None:intergenic | 40.0% | |
AGAACTTGTGGAAAGACGAT+GGG | + | chr8.4:21696206-21696225 | MS.gene011370:CDS | 40.0% | |
AGATACAACGCTGGATATAC+TGG | + | chr8.4:21696914-21696933 | MS.gene011370:CDS | 40.0% | |
ATCCTTCAGATATTGCCTTG+GGG | - | chr8.4:21696566-21696585 | None:intergenic | 40.0% | |
ATGAATGACTTTCCACCCTT+GGG | - | chr8.4:21694902-21694921 | None:intergenic | 40.0% | |
ATTCGAAGCCTAGAAGATCT+TGG | + | chr8.4:21696723-21696742 | MS.gene011370:CDS | 40.0% | |
CATCCTTCAGATATTGCCTT+GGG | - | chr8.4:21696567-21696586 | None:intergenic | 40.0% | |
CATTAGTCCCACACAGATTA+GGG | + | chr8.4:21695966-21695985 | MS.gene011370:CDS | 40.0% | |
CCATGGAGAAGAAGAATGAT+AGG | + | chr8.4:21697282-21697301 | MS.gene011370:CDS | 40.0% | |
CCTATCATTCTTCTTCTCCA+TGG | - | chr8.4:21697285-21697304 | None:intergenic | 40.0% | |
CTATATGAAGTGCAGATAGC+AGG | - | chr8.4:21696836-21696855 | None:intergenic | 40.0% | |
GAAGAAGAATGATAGGATGC+TGG | + | chr8.4:21697289-21697308 | MS.gene011370:CDS | 40.0% | |
GAATCCTTTAGTCAGCTGAT+TGG | - | chr8.4:21697354-21697373 | None:intergenic | 40.0% | |
GAGAAAACCCTTTCACCATT+TGG | - | chr8.4:21696473-21696492 | None:intergenic | 40.0% | |
GGATGAATTCAAGAAAGCAG+TGG | + | chr8.4:21695759-21695778 | MS.gene011370:CDS | 40.0% | |
GGCTGTTGGATTTCTTGAAA+AGG | + | chr8.4:21694190-21694209 | MS.gene011370:intron | 40.0% | |
GTGGACATCAATGCAAAACA+AGG | + | chr8.4:21695032-21695051 | MS.gene011370:intron | 40.0% | |
TAAAGGATTCACCCGGATTA+AGG | + | chr8.4:21697364-21697383 | MS.gene011370:CDS | 40.0% | |
TATGGGTCTGTTTGGAAGAT+TGG | - | chr8.4:21695576-21695595 | None:intergenic | 40.0% | |
TCATTAGTCCCACACAGATT+AGG | + | chr8.4:21695965-21695984 | MS.gene011370:CDS | 40.0% | |
TGAAAGGCTATTGAGATGCT+GGG | + | chr8.4:21697097-21697116 | MS.gene011370:CDS | 40.0% | |
TGAGGTAGTGAAGAAAGCTT+TGG | + | chr8.4:21697253-21697272 | MS.gene011370:CDS | 40.0% | |
TGTAGGTGTATACGTGAGTT+GGG | + | chr8.4:21696321-21696340 | MS.gene011370:CDS | 40.0% | |
TTAAAAGAAGCAGCAGCAGA+AGG | + | chr8.4:21696432-21696451 | MS.gene011370:CDS | 40.0% | |
TTTATAGGAACCCTATGAGC+TGG | + | chr8.4:21695711-21695730 | MS.gene011370:intron | 40.0% | |
TTTCTTCCCATCATTCCCAA+GGG | + | chr8.4:21694884-21694903 | MS.gene011370:intron | 40.0% | |
! | ACATGGGCATTTTGTCGTAT+TGG | + | chr8.4:21694847-21694866 | MS.gene011370:intron | 40.0% |
! | ACTGATTAGTTCCAGCCAAA+TGG | + | chr8.4:21696455-21696474 | MS.gene011370:CDS | 40.0% |
! | ATTTCGTCTTTTGCGGCTAA+TGG | + | chr8.4:21694346-21694365 | MS.gene011370:intron | 40.0% |
! | CAGTAATGGGGATGTTGATT+TGG | + | chr8.4:21695804-21695823 | MS.gene011370:CDS | 40.0% |
! | CATTAAGCGACTTGTTTCCA+TGG | + | chr8.4:21695876-21695895 | MS.gene011370:CDS | 40.0% |
! | GCAAATTTTTCCTTGGCGTT+TGG | - | chr8.4:21697419-21697438 | None:intergenic | 40.0% |
! | GTAGTTGCATTTTCGGTACA+TGG | + | chr8.4:21694830-21694849 | MS.gene011370:intron | 40.0% |
! | GTTTCACTACCACTGCATTT+TGG | - | chr8.4:21697035-21697054 | None:intergenic | 40.0% |
! | TCTTGGAGGAGTATGAAAGT+GGG | + | chr8.4:21697171-21697190 | MS.gene011370:CDS | 40.0% |
! | TGAAACAAGGCTTTAGCTGA+TGG | - | chr8.4:21696534-21696553 | None:intergenic | 40.0% |
! | TGACATCCTTGCTTTATTCC+TGG | + | chr8.4:21696050-21696069 | MS.gene011370:CDS | 40.0% |
!! | AACGAGGGATTTTTGACTGA+AGG | + | chr8.4:21693877-21693896 | MS.gene011370:CDS | 40.0% |
!! | GATTTTTGACTGAAGGACAG+AGG | + | chr8.4:21693884-21693903 | MS.gene011370:CDS | 40.0% |
!! | TCCAAATTATGATAGTGGCG+AGG | + | chr8.4:21695385-21695404 | MS.gene011370:CDS | 40.0% |
!!! | AGCTTGCTCTGTTTTTAGCT+CGG | + | chr8.4:21696949-21696968 | MS.gene011370:CDS | 40.0% |
!!! | GGCTAATGGCTTTTTTGCAA+TGG | + | chr8.4:21694360-21694379 | MS.gene011370:intron | 40.0% |
AAACCCTTTCACCATTTGGC+TGG | - | chr8.4:21696469-21696488 | None:intergenic | 45.0% | |
AACTACTGTTACTGACCCCT+TGG | + | chr8.4:21695738-21695757 | MS.gene011370:CDS | 45.0% | |
AATCTCCATGGCAAGTACCA+GGG | - | chr8.4:21696382-21696401 | None:intergenic | 45.0% | |
ACCACCAATCAGCTGACTAA+AGG | + | chr8.4:21697347-21697366 | MS.gene011370:CDS | 45.0% | |
AGACTACCACCAAAATGCAG+TGG | + | chr8.4:21697023-21697042 | MS.gene011370:CDS | 45.0% | |
AGCTGACTAAAGGATTCACC+CGG | + | chr8.4:21697357-21697376 | MS.gene011370:CDS | 45.0% | |
AGCTGAGAGATAGCTCTTCT+CGG | - | chr8.4:21696175-21696194 | None:intergenic | 45.0% | |
AGGGTGAGTTGTGTGTTCTT+TGG | + | chr8.4:21694088-21694107 | MS.gene011370:intron | 45.0% | |
AGTAGTTCCAACCAGCTCAT+AGG | - | chr8.4:21695725-21695744 | None:intergenic | 45.0% | |
AGTTCCAGCCAAATGGTGAA+AGG | + | chr8.4:21696462-21696481 | MS.gene011370:CDS | 45.0% | |
AGTTGCATTCTTCCATCACG+AGG | + | chr8.4:21696344-21696363 | MS.gene011370:CDS | 45.0% | |
ATCAAGACCCTCCTTAATCC+GGG | - | chr8.4:21697378-21697397 | None:intergenic | 45.0% | |
ATCTGCTGATGATCTTGCAG+TGG | + | chr8.4:21696011-21696030 | MS.gene011370:CDS | 45.0% | |
ATGCCAGTGTATTCGTGACT+TGG | + | chr8.4:21697211-21697230 | MS.gene011370:CDS | 45.0% | |
CAACTCACGTATACACCTAC+AGG | - | chr8.4:21696322-21696341 | None:intergenic | 45.0% | |
CAAGATCACAAAGCTCTTGG+AGG | + | chr8.4:21697157-21697176 | MS.gene011370:CDS | 45.0% | |
CAATCCAGCTGGTGAAAATG+GGG | + | chr8.4:21696605-21696624 | MS.gene011370:CDS | 45.0% | |
CACTTGAGCCAAGTTCTCTT+AGG | - | chr8.4:21695840-21695859 | None:intergenic | 45.0% | |
CAGAACTTGTGGAAAGACGA+TGG | + | chr8.4:21696205-21696224 | MS.gene011370:CDS | 45.0% | |
CATCAAGACCCTCCTTAATC+CGG | - | chr8.4:21697379-21697398 | None:intergenic | 45.0% | |
CCAAGGCAATATCTGAAGGA+TGG | + | chr8.4:21696565-21696584 | MS.gene011370:CDS | 45.0% | |
CCAATCCAGCTGGTGAAAAT+GGG | + | chr8.4:21696604-21696623 | MS.gene011370:CDS | 45.0% | |
CCATCCTTCAGATATTGCCT+TGG | - | chr8.4:21696568-21696587 | None:intergenic | 45.0% | |
CTGTAGGTGTATACGTGAGT+TGG | + | chr8.4:21696320-21696339 | MS.gene011370:CDS | 45.0% | |
CTTTCTTCCCATCATTCCCA+AGG | + | chr8.4:21694883-21694902 | MS.gene011370:intron | 45.0% | |
GAAAGGCTATTGAGATGCTG+GGG | + | chr8.4:21697098-21697117 | MS.gene011370:CDS | 45.0% | |
GAACTTGTGGAAAGACGATG+GGG | + | chr8.4:21696207-21696226 | MS.gene011370:CDS | 45.0% | |
GATGCCTTTCTTCAACCATG+AGG | + | chr8.4:21697235-21697254 | MS.gene011370:CDS | 45.0% | |
GCATCTGACCTAAGAGAACT+TGG | + | chr8.4:21695829-21695848 | MS.gene011370:CDS | 45.0% | |
GGACAAGATCACAAAGCTCT+TGG | + | chr8.4:21697154-21697173 | MS.gene011370:CDS | 45.0% | |
GGACCGAAAGAACAGAGAAA+AGG | + | chr8.4:21696797-21696816 | MS.gene011370:CDS | 45.0% | |
GGGGACAAATGACTGAAACA+AGG | - | chr8.4:21696547-21696566 | None:intergenic | 45.0% | |
GGTCTGTTTGGAAGATTGGA+GGG | - | chr8.4:21695572-21695591 | None:intergenic | 45.0% | |
GTAGTTCCAACCAGCTCATA+GGG | - | chr8.4:21695724-21695743 | None:intergenic | 45.0% | |
GTCTGTTTGGAAGATTGGAG+GGG | - | chr8.4:21695571-21695590 | None:intergenic | 45.0% | |
GTCTTTCCACAAGTTCTGCA+TGG | - | chr8.4:21696203-21696222 | None:intergenic | 45.0% | |
GTGAAAGGCTATTGAGATGC+TGG | + | chr8.4:21697096-21697115 | MS.gene011370:CDS | 45.0% | |
GTTCCAGCCAAATGGTGAAA+GGG | + | chr8.4:21696463-21696482 | MS.gene011370:CDS | 45.0% | |
GTTTCAGTCATTTGTCCCCA+AGG | + | chr8.4:21696548-21696567 | MS.gene011370:CDS | 45.0% | |
TAGCCCTGAATTTGGGAGAA+AGG | - | chr8.4:21695209-21695228 | None:intergenic | 45.0% | |
TCCTTTAGTCAGCTGATTGG+TGG | - | chr8.4:21697351-21697370 | None:intergenic | 45.0% | |
TCTAGGCTTCGAATGAGTTC+AGG | - | chr8.4:21696717-21696736 | None:intergenic | 45.0% | |
TGATCAGCAAGCAATGTCGA+CGG | - | chr8.4:21693967-21693986 | None:intergenic | 45.0% | |
TGATCTTGCAGTGGATATCC+TGG | + | chr8.4:21696020-21696039 | MS.gene011370:CDS | 45.0% | |
TGCCAGTGTATTCGTGACTT+GGG | + | chr8.4:21697212-21697231 | MS.gene011370:CDS | 45.0% | |
TTCTGCTGAAGGAATCTCCA+TGG | - | chr8.4:21696394-21696413 | None:intergenic | 45.0% | |
TTGATCATGAGGTACAGAGG+TGG | + | chr8.4:21695013-21695032 | MS.gene011370:intron | 45.0% | |
TTGTTTCCATGGCAATGGAC+AGG | + | chr8.4:21695887-21695906 | MS.gene011370:CDS | 45.0% | |
TTTCCACCCTTGGGAATGAT+GGG | - | chr8.4:21694893-21694912 | None:intergenic | 45.0% | |
! | AATTCCCCATTTTCACCAGC+TGG | - | chr8.4:21696612-21696631 | None:intergenic | 45.0% |
! | CTCTTGGAGGAGTATGAAAG+TGG | + | chr8.4:21697170-21697189 | MS.gene011370:CDS | 45.0% |
! | CTTGGAGGAGTATGAAAGTG+GGG | + | chr8.4:21697172-21697191 | MS.gene011370:CDS | 45.0% |
! | GAAAGCTTTGGTTATGGCCA+TGG | + | chr8.4:21697265-21697284 | MS.gene011370:CDS | 45.0% |
! | GGGTTTTCTCGATTGGAAGA+AGG | + | chr8.4:21696483-21696502 | MS.gene011370:CDS | 45.0% |
! | GGTCGCATTCTGGAAAGTTA+GGG | + | chr8.4:21694055-21694074 | MS.gene011370:CDS | 45.0% |
! | GGTGAAAGGGTTTTCTCGAT+TGG | + | chr8.4:21696476-21696495 | MS.gene011370:CDS | 45.0% |
! | TAAGGAGGGTCTTGATGATC+TGG | + | chr8.4:21697382-21697401 | MS.gene011370:CDS | 45.0% |
! | TCACTACCACTGCATTTTGG+TGG | - | chr8.4:21697032-21697051 | None:intergenic | 45.0% |
! | TGGTAGTGAAACTGTGCGTA+TGG | + | chr8.4:21697043-21697062 | MS.gene011370:CDS | 45.0% |
! | TTGGAGGAGTATGAAAGTGG+GGG | + | chr8.4:21697173-21697192 | MS.gene011370:CDS | 45.0% |
!!! | GCTTGCTCTGTTTTTAGCTC+GGG | + | chr8.4:21696950-21696969 | MS.gene011370:CDS | 45.0% |
AGGATTCACCCGGATTAAGG+AGG | + | chr8.4:21697367-21697386 | MS.gene011370:CDS | 50.0% | |
AGTCCCACACAGATTAGGGA+TGG | + | chr8.4:21695970-21695989 | MS.gene011370:CDS | 50.0% | |
ATCATGCCTGTCCATTGCCA+TGG | - | chr8.4:21695896-21695915 | None:intergenic | 50.0% | |
CAAGGATGTCAACTGCATCC+AGG | - | chr8.4:21696041-21696060 | None:intergenic | 50.0% | |
CACGTGCCAGGAATAAAGCA+AGG | - | chr8.4:21696059-21696078 | None:intergenic | 50.0% | |
CAGGTGCTCCAAGATCTTCT+AGG | - | chr8.4:21696734-21696753 | None:intergenic | 50.0% | |
CATCACATCAAAGCTCCTGC+TGG | + | chr8.4:21693988-21694007 | MS.gene011370:CDS | 50.0% | |
CCATCACGAGGTTGTGAAGA+AGG | + | chr8.4:21696356-21696375 | MS.gene011370:CDS | 50.0% | |
CCTTCTTCACAACCTCGTGA+TGG | - | chr8.4:21696359-21696378 | None:intergenic | 50.0% | |
CTTTCCACCCTTGGGAATGA+TGG | - | chr8.4:21694894-21694913 | None:intergenic | 50.0% | |
GAATCTCCATGGCAAGTACC+AGG | - | chr8.4:21696383-21696402 | None:intergenic | 50.0% | |
GCCAATCCAGCTGGTGAAAA+TGG | + | chr8.4:21696603-21696622 | MS.gene011370:CDS | 50.0% | |
GCCAGTGTATTCGTGACTTG+GGG | + | chr8.4:21697213-21697232 | MS.gene011370:CDS | 50.0% | |
GCTCTTCCGGAATCTTCCAA+GGG | + | chr8.4:21696129-21696148 | MS.gene011370:CDS | 50.0% | |
GGATTCACCCGGATTAAGGA+GGG | + | chr8.4:21697368-21697387 | MS.gene011370:CDS | 50.0% | |
GGCAATGGACAGGCATGATA+AGG | + | chr8.4:21695897-21695916 | MS.gene011370:CDS | 50.0% | |
GGGGCAGAGGAATCAAATGA+TGG | - | chr8.4:21697482-21697501 | None:intergenic | 50.0% | |
GGGTCTGTTTGGAAGATTGG+AGG | - | chr8.4:21695573-21695592 | None:intergenic | 50.0% | |
GGTCATCTTGTGGATGCAGA+TGG | + | chr8.4:21695293-21695312 | MS.gene011370:intron | 50.0% | |
GTCCCCAAGGCAATATCTGA+AGG | + | chr8.4:21696561-21696580 | MS.gene011370:CDS | 50.0% | |
GTTTGGAAGATTGGAGGGGA+CGG | - | chr8.4:21695567-21695586 | None:intergenic | 50.0% | |
TAGGAACCCTATGAGCTGGT+TGG | + | chr8.4:21695715-21695734 | MS.gene011370:intron | 50.0% | |
TATGAAAGTGGGGGGGTTGT+CGG | + | chr8.4:21697182-21697201 | MS.gene011370:CDS | 50.0% | |
TCAGCTCCCTTGGAAGATTC+CGG | - | chr8.4:21696138-21696157 | None:intergenic | 50.0% | |
TCCACAAGTTCTGCATGGTG+TGG | - | chr8.4:21696198-21696217 | None:intergenic | 50.0% | |
TCCACACCATGCAGAACTTG+TGG | + | chr8.4:21696194-21696213 | MS.gene011370:CDS | 50.0% | |
TCCCCAAGTCACGAATACAC+TGG | - | chr8.4:21697217-21697236 | None:intergenic | 50.0% | |
TCTGGACATACCAAACGCCA+AGG | + | chr8.4:21697406-21697425 | MS.gene011370:CDS | 50.0% | |
TGTGCTTGCCCCATTGAACT+TGG | + | chr8.4:21696986-21697005 | MS.gene011370:CDS | 50.0% | |
TTTGGAAGATTGGAGGGGAC+GGG | - | chr8.4:21695566-21695585 | None:intergenic | 50.0% | |
! | CCCATTTTCACCAGCTGGAT+TGG | - | chr8.4:21696607-21696626 | None:intergenic | 50.0% |
! | CGCATTCTGGAAAGTTAGGG+CGG | + | chr8.4:21694058-21694077 | MS.gene011370:CDS | 50.0% |
! | CGGTCGCATTCTGGAAAGTT+AGG | + | chr8.4:21694054-21694073 | MS.gene011370:CDS | 50.0% |
! | GCATTCTGGAAAGTTAGGGC+GGG | + | chr8.4:21694059-21694078 | MS.gene011370:CDS | 50.0% |
! | GCGACTTGTTTCCATGGCAA+TGG | + | chr8.4:21695882-21695901 | MS.gene011370:CDS | 50.0% |
! | TGGAGGAGTATGAAAGTGGG+GGG | + | chr8.4:21697174-21697193 | MS.gene011370:CDS | 50.0% |
!! | AAAGTTAGGGCGGGCTAAGA+AGG | + | chr8.4:21694068-21694087 | MS.gene011370:CDS | 50.0% |
!! | AAGTTAGGGCGGGCTAAGAA+GGG | + | chr8.4:21694069-21694088 | MS.gene011370:CDS | 50.0% |
!! | TAGGATGCTGGATTTGCTGC+AGG | + | chr8.4:21697301-21697320 | MS.gene011370:CDS | 50.0% |
!! | TCAGCTGATTGGTGGTGATG+AGG | - | chr8.4:21697343-21697362 | None:intergenic | 50.0% |
!! | TTCACCAGCTGGATTGGCAA+AGG | - | chr8.4:21696601-21696620 | None:intergenic | 50.0% |
AGACTGCTGGGATTGCTGTG+AGG | + | chr8.4:21694022-21694041 | MS.gene011370:CDS | 55.0% | |
AGCAATGTCGACGGCGACTT+AGG | - | chr8.4:21693958-21693977 | None:intergenic | 55.0% | |
AGGCTATTGAGATGCTGGGG+CGG | + | chr8.4:21697101-21697120 | MS.gene011370:CDS | 55.0% | |
ATTGGAGGGGACGGGATTAG+AGG | - | chr8.4:21695558-21695577 | None:intergenic | 55.0% | |
CAAAGCTCCTGCTGGTGGTA+AGG | + | chr8.4:21693996-21694015 | MS.gene011370:CDS | 55.0% | |
CACATCAAAGCTCCTGCTGG+TGG | + | chr8.4:21693991-21694010 | MS.gene011370:CDS | 55.0% | |
CATCAACAACAGCACGTGCC+AGG | - | chr8.4:21696071-21696090 | None:intergenic | 55.0% | |
CTCTCTTCTGCTCGTCATGC+AGG | + | chr8.4:21697074-21697093 | MS.gene011370:CDS | 55.0% | |
CTGCTCGTCATGCAGGTGAA+AGG | + | chr8.4:21697081-21697100 | MS.gene011370:CDS | 55.0% | |
CTTCCCATCATTCCCAAGGG+TGG | + | chr8.4:21694887-21694906 | MS.gene011370:intron | 55.0% | |
CTTCCTTGCCCTGGCAAGAA+AGG | - | chr8.4:21696109-21696128 | None:intergenic | 55.0% | |
CTTGACTACCTCAGCTCCCT+TGG | - | chr8.4:21696148-21696167 | None:intergenic | 55.0% | |
CTTGTGGAAAGACGATGGGG+TGG | + | chr8.4:21696210-21696229 | MS.gene011370:CDS | 55.0% | |
CTTGTGGATGCAGATGGTGC+TGG | + | chr8.4:21695299-21695318 | MS.gene011370:intron | 55.0% | |
CTTTCTTGCCAGGGCAAGGA+AGG | + | chr8.4:21696107-21696126 | MS.gene011370:CDS | 55.0% | |
GCGAGACACTTGAAGCCTGT+AGG | + | chr8.4:21696304-21696323 | MS.gene011370:CDS | 55.0% | |
GCTTCCTTTGCCAATCCAGC+TGG | + | chr8.4:21696594-21696613 | MS.gene011370:CDS | 55.0% | |
GGAATCTTCCAAGGGAGCTG+AGG | + | chr8.4:21696137-21696156 | MS.gene011370:CDS | 55.0% | |
GGCTCTTCCGGAATCTTCCA+AGG | + | chr8.4:21696128-21696147 | MS.gene011370:CDS | 55.0% | |
GTGGAGCATGCACAGACCAA+GGG | + | chr8.4:21697446-21697465 | MS.gene011370:CDS | 55.0% | |
GTGGTAAGGCACAGACTGCT+GGG | + | chr8.4:21694010-21694029 | MS.gene011370:CDS | 55.0% | |
TCCACCAGCCTTTCTTGCCA+GGG | + | chr8.4:21696098-21696117 | MS.gene011370:CDS | 55.0% | |
TGATGGTAGAAGCCACCCCT+TGG | - | chr8.4:21697465-21697484 | None:intergenic | 55.0% | |
TGGAGCATGCACAGACCAAG+GGG | + | chr8.4:21697447-21697466 | MS.gene011370:CDS | 55.0% | |
TGTGGAGCATGCACAGACCA+AGG | + | chr8.4:21697445-21697464 | MS.gene011370:CDS | 55.0% | |
TTCCACCAGCCTTTCTTGCC+AGG | + | chr8.4:21696097-21696116 | MS.gene011370:CDS | 55.0% | |
TTGCTGTGAGGCATGTGCGT+CGG | + | chr8.4:21694034-21694053 | MS.gene011370:CDS | 55.0% | |
TTGGAGGGGACGGGATTAGA+GGG | - | chr8.4:21695557-21695576 | None:intergenic | 55.0% | |
! | ATGGGCTGTGGAGGATGCTA+AGG | + | chr8.4:21697133-21697152 | MS.gene011370:CDS | 55.0% |
! | GGAGGAGTATGAAAGTGGGG+GGG | + | chr8.4:21697175-21697194 | MS.gene011370:CDS | 55.0% |
! | GGGTCTTGATGATCTGGCTC+TGG | + | chr8.4:21697388-21697407 | MS.gene011370:CDS | 55.0% |
!! | CTGCAGGAGTGCTTCAGTGA+AGG | + | chr8.4:21697317-21697336 | MS.gene011370:CDS | 55.0% |
!! | GCAGATGGTGCTGGTGGTAA+GGG | + | chr8.4:21695308-21695327 | MS.gene011370:intron | 55.0% |
!! | TGCAGATGGTGCTGGTGGTA+AGG | + | chr8.4:21695307-21695326 | MS.gene011370:intron | 55.0% |
!! | TGCTGGTGGTAAGGGCACTT+GGG | + | chr8.4:21695316-21695335 | MS.gene011370:CDS | 55.0% |
AGCATGCACAGACCAAGGGG+TGG | + | chr8.4:21697450-21697469 | MS.gene011370:CDS | 60.0% | |
CAGCCTTTCTTGCCAGGGCA+AGG | + | chr8.4:21696103-21696122 | MS.gene011370:CDS | 60.0% | |
CAGGGCAAGGAAGGCTCTTC+CGG | + | chr8.4:21696116-21696135 | MS.gene011370:CDS | 60.0% | |
CGAGGTTGTGAAGAAGGCCC+TGG | + | chr8.4:21696362-21696381 | MS.gene011370:CDS | 60.0% | |
CTATTGAGATGCTGGGGCGG+GGG | + | chr8.4:21697104-21697123 | MS.gene011370:CDS | 60.0% | |
CTTGCCCTGGCAAGAAAGGC+TGG | - | chr8.4:21696105-21696124 | None:intergenic | 60.0% | |
GAAGGCCCTGGTACTTGCCA+TGG | + | chr8.4:21696374-21696393 | MS.gene011370:CDS | 60.0% | |
GCTATTGAGATGCTGGGGCG+GGG | + | chr8.4:21697103-21697122 | MS.gene011370:CDS | 60.0% | |
GGCTATTGAGATGCTGGGGC+GGG | + | chr8.4:21697102-21697121 | MS.gene011370:CDS | 60.0% | |
GGGCACTTGGGGGAAATTGC+TGG | + | chr8.4:21695328-21695347 | MS.gene011370:CDS | 60.0% | |
GGTGGTAAGGCACAGACTGC+TGG | + | chr8.4:21694009-21694028 | MS.gene011370:CDS | 60.0% | |
GTCTGTGCCTTACCACCAGC+AGG | - | chr8.4:21694006-21694025 | None:intergenic | 60.0% | |
! | CATGTGCGTCGGTCGCATTC+TGG | + | chr8.4:21694045-21694064 | MS.gene011370:CDS | 60.0% |
! | GTGGATGCAGATGGTGCTGG+TGG | + | chr8.4:21695302-21695321 | MS.gene011370:intron | 60.0% |
!! | CTGGTGGTAAGGGCACTTGG+GGG | + | chr8.4:21695318-21695337 | MS.gene011370:CDS | 60.0% |
!! | GCTGGTGGTAAGGGCACTTG+GGG | + | chr8.4:21695317-21695336 | MS.gene011370:CDS | 60.0% |
!! | GTGCTGGTGGTAAGGGCACT+TGG | + | chr8.4:21695315-21695334 | MS.gene011370:CDS | 60.0% |
CGGAAGAGCCTTCCTTGCCC+TGG | - | chr8.4:21696118-21696137 | None:intergenic | 65.0% | |
GCCCTGGCAAGAAAGGCTGG+TGG | - | chr8.4:21696102-21696121 | None:intergenic | 65.0% | |
!! | GGGAACTGGATGGGCTGTGG+AGG | + | chr8.4:21697124-21697143 | MS.gene011370:CDS | 65.0% |
AGATGCTGGGGCGGGGGAAC+TGG | + | chr8.4:21697110-21697129 | MS.gene011370:CDS | 70.0% | |
CTGGGGCGGGGGAACTGGAT+GGG | + | chr8.4:21697115-21697134 | MS.gene011370:CDS | 70.0% | |
!! | CGGGGGAACTGGATGGGCTG+TGG | + | chr8.4:21697121-21697140 | MS.gene011370:CDS | 70.0% |
GCTGGGGCGGGGGAACTGGA+TGG | + | chr8.4:21697114-21697133 | MS.gene011370:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 21693868 | 21697511 | 21693868 | ID=MS.gene011370 |
chr8.4 | mRNA | 21693868 | 21697511 | 21693868 | ID=MS.gene011370.t1;Parent=MS.gene011370 |
chr8.4 | exon | 21693868 | 21694090 | 21693868 | ID=MS.gene011370.t1.exon1;Parent=MS.gene011370.t1 |
chr8.4 | CDS | 21693868 | 21694090 | 21693868 | ID=cds.MS.gene011370.t1;Parent=MS.gene011370.t1 |
chr8.4 | exon | 21695312 | 21695406 | 21695312 | ID=MS.gene011370.t1.exon2;Parent=MS.gene011370.t1 |
chr8.4 | CDS | 21695312 | 21695406 | 21695312 | ID=cds.MS.gene011370.t1;Parent=MS.gene011370.t1 |
chr8.4 | exon | 21695718 | 21697511 | 21695718 | ID=MS.gene011370.t1.exon3;Parent=MS.gene011370.t1 |
chr8.4 | CDS | 21695718 | 21697511 | 21695718 | ID=cds.MS.gene011370.t1;Parent=MS.gene011370.t1 |
Gene Sequence |
Protein sequence |