Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60302.t1 | XP_013465806.1 | 97.5 | 709 | 17 | 1 | 1 | 709 | 1 | 708 | 0.00E+00 | 1263.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60302.t1 | F4IRM4 | 56.4 | 741 | 286 | 9 | 1 | 707 | 1 | 738 | 4.8e-219 | 762.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60302.t1 | A0A072VDJ0 | 97.5 | 709 | 17 | 1 | 1 | 709 | 1 | 708 | 0.0e+00 | 1263.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04915 | MS.gene60302 | 0.838767 | 2.36E-57 | -1.69E-46 |
| MS.gene04917 | MS.gene60302 | 0.842757 | 2.13E-58 | -1.69E-46 |
| MS.gene049283 | MS.gene60302 | 0.823646 | 1.24E-53 | -1.69E-46 |
| MS.gene049419 | MS.gene60302 | -0.807428 | 5.08E-50 | -1.69E-46 |
| MS.gene049983 | MS.gene60302 | 0.831567 | 1.55E-55 | -1.69E-46 |
| MS.gene04998 | MS.gene60302 | 0.807657 | 4.54E-50 | -1.69E-46 |
| MS.gene050359 | MS.gene60302 | 0.809784 | 1.59E-50 | -1.69E-46 |
| MS.gene050414 | MS.gene60302 | 0.821806 | 3.32E-53 | -1.69E-46 |
| MS.gene050646 | MS.gene60302 | 0.805643 | 1.21E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene60302 | 0.860466 | 2.03E-63 | -1.69E-46 |
| MS.gene050737 | MS.gene60302 | 0.83213 | 1.13E-55 | -1.69E-46 |
| MS.gene050759 | MS.gene60302 | 0.820773 | 5.74E-53 | -1.69E-46 |
| MS.gene050941 | MS.gene60302 | 0.865111 | 7.48E-65 | -1.69E-46 |
| MS.gene050962 | MS.gene60302 | 0.809612 | 1.74E-50 | -1.69E-46 |
| MS.gene051122 | MS.gene60302 | 0.819755 | 9.83E-53 | -1.69E-46 |
| MS.gene051184 | MS.gene60302 | 0.855183 | 7.49E-62 | -1.69E-46 |
| MS.gene051541 | MS.gene60302 | 0.856841 | 2.45E-62 | -1.69E-46 |
| MS.gene051831 | MS.gene60302 | 0.813652 | 2.30E-51 | -1.69E-46 |
| MS.gene051852 | MS.gene60302 | 0.815918 | 7.23E-52 | -1.69E-46 |
| MS.gene052016 | MS.gene60302 | 0.800729 | 1.26E-48 | -1.69E-46 |
| MS.gene052052 | MS.gene60302 | 0.804131 | 2.50E-49 | -1.69E-46 |
| MS.gene052118 | MS.gene60302 | 0.80188 | 7.31E-49 | -1.69E-46 |
| MS.gene052342 | MS.gene60302 | 0.818979 | 1.48E-52 | -1.69E-46 |
| MS.gene052434 | MS.gene60302 | 0.811851 | 5.69E-51 | -1.69E-46 |
| MS.gene052463 | MS.gene60302 | 0.819301 | 1.25E-52 | -1.69E-46 |
| MS.gene052464 | MS.gene60302 | 0.809494 | 1.84E-50 | -1.69E-46 |
| MS.gene052493 | MS.gene60302 | 0.833793 | 4.35E-56 | -1.69E-46 |
| MS.gene052518 | MS.gene60302 | 0.800935 | 1.14E-48 | -1.69E-46 |
| MS.gene052674 | MS.gene60302 | 0.844719 | 6.35E-59 | -1.69E-46 |
| MS.gene052675 | MS.gene60302 | 0.839611 | 1.43E-57 | -1.69E-46 |
| MS.gene052677 | MS.gene60302 | 0.833243 | 5.96E-56 | -1.69E-46 |
| MS.gene05350 | MS.gene60302 | 0.824657 | 7.17E-54 | -1.69E-46 |
| MS.gene053726 | MS.gene60302 | 0.839135 | 1.90E-57 | -1.69E-46 |
| MS.gene054479 | MS.gene60302 | 0.849941 | 2.34E-60 | -1.69E-46 |
| MS.gene054641 | MS.gene60302 | 0.802633 | 5.11E-49 | -1.69E-46 |
| MS.gene054892 | MS.gene60302 | 0.858361 | 8.68E-63 | -1.69E-46 |
| MS.gene054893 | MS.gene60302 | 0.864194 | 1.45E-64 | -1.69E-46 |
| MS.gene055327 | MS.gene60302 | 0.824463 | 7.96E-54 | -1.69E-46 |
| MS.gene055513 | MS.gene60302 | 0.809197 | 2.13E-50 | -1.69E-46 |
| MS.gene055864 | MS.gene60302 | 0.857062 | 2.11E-62 | -1.69E-46 |
| MS.gene056480 | MS.gene60302 | 0.813233 | 2.84E-51 | -1.69E-46 |
| MS.gene056779 | MS.gene60302 | 0.800299 | 1.54E-48 | -1.69E-46 |
| MS.gene056831 | MS.gene60302 | 0.801539 | 8.59E-49 | -1.69E-46 |
| MS.gene056849 | MS.gene60302 | 0.805864 | 1.09E-49 | -1.69E-46 |
| MS.gene058081 | MS.gene60302 | 0.82691 | 2.09E-54 | -1.69E-46 |
| MS.gene058159 | MS.gene60302 | 0.814036 | 1.89E-51 | -1.69E-46 |
| MS.gene058223 | MS.gene60302 | -0.823745 | 1.17E-53 | -1.69E-46 |
| MS.gene058278 | MS.gene60302 | 0.85086 | 1.29E-60 | -1.69E-46 |
| MS.gene058429 | MS.gene60302 | 0.880255 | 6.38E-70 | -1.69E-46 |
| MS.gene058758 | MS.gene60302 | 0.814769 | 1.30E-51 | -1.69E-46 |
| MS.gene059170 | MS.gene60302 | 0.826363 | 2.83E-54 | -1.69E-46 |
| MS.gene059283 | MS.gene60302 | 0.833638 | 4.75E-56 | -1.69E-46 |
| MS.gene05952 | MS.gene60302 | 0.818436 | 1.96E-52 | -1.69E-46 |
| MS.gene060259 | MS.gene60302 | 0.836665 | 8.19E-57 | -1.69E-46 |
| MS.gene060412 | MS.gene60302 | 0.806122 | 9.59E-50 | -1.69E-46 |
| MS.gene060435 | MS.gene60302 | 0.824221 | 9.08E-54 | -1.69E-46 |
| MS.gene06052 | MS.gene60302 | 0.851098 | 1.11E-60 | -1.69E-46 |
| MS.gene060777 | MS.gene60302 | 0.816513 | 5.32E-52 | -1.69E-46 |
| MS.gene060850 | MS.gene60302 | 0.833072 | 6.58E-56 | -1.69E-46 |
| MS.gene060851 | MS.gene60302 | 0.842489 | 2.51E-58 | -1.69E-46 |
| MS.gene060852 | MS.gene60302 | 0.842913 | 1.93E-58 | -1.69E-46 |
| MS.gene060932 | MS.gene60302 | 0.93454 | 3.45E-96 | -1.69E-46 |
| MS.gene061100 | MS.gene60302 | 0.802846 | 4.62E-49 | -1.69E-46 |
| MS.gene06121 | MS.gene60302 | 0.850628 | 1.50E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene68933 | MS.gene60302 | PPI |
| MS.gene012678 | MS.gene60302 | PPI |
| MS.gene042139 | MS.gene60302 | PPI |
| MS.gene68959 | MS.gene60302 | PPI |
| MS.gene60302 | MS.gene68877 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60302.t1 | MTR_1g012840 | 97.038 | 709 | 20 | 1 | 1 | 709 | 1 | 708 | 0.0 | 1428 |
| MS.gene60302.t1 | MTR_4g132780 | 36.207 | 754 | 371 | 14 | 1 | 659 | 1 | 739 | 5.66e-144 | 439 |
| MS.gene60302.t1 | MTR_2g025130 | 37.642 | 441 | 196 | 10 | 251 | 662 | 50 | 440 | 1.01e-88 | 286 |
| MS.gene60302.t1 | MTR_2g451540 | 57.377 | 183 | 73 | 3 | 6 | 185 | 2 | 182 | 1.78e-60 | 216 |
| MS.gene60302.t1 | MTR_7g059150 | 31.646 | 158 | 93 | 5 | 7 | 152 | 52 | 206 | 5.75e-16 | 79.0 |
| MS.gene60302.t1 | MTR_2g090135 | 33.913 | 115 | 70 | 4 | 41 | 152 | 98 | 209 | 8.06e-14 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60302.t1 | AT2G25290 | 59.164 | 742 | 264 | 15 | 1 | 707 | 1 | 738 | 0.0 | 831 |
| MS.gene60302.t1 | AT2G25290 | 59.164 | 742 | 264 | 15 | 1 | 707 | 1 | 738 | 0.0 | 831 |
| MS.gene60302.t1 | AT2G25290 | 59.164 | 742 | 264 | 15 | 1 | 707 | 1 | 738 | 0.0 | 831 |
| MS.gene60302.t1 | AT2G25290 | 59.164 | 742 | 264 | 15 | 1 | 707 | 1 | 738 | 0.0 | 831 |
| MS.gene60302.t1 | AT4G32070 | 55.357 | 784 | 264 | 18 | 1 | 707 | 1 | 775 | 0.0 | 808 |
| MS.gene60302.t1 | AT4G32070 | 55.357 | 784 | 264 | 18 | 1 | 707 | 1 | 775 | 0.0 | 808 |
| MS.gene60302.t1 | AT5G20360 | 39.478 | 689 | 386 | 13 | 38 | 705 | 33 | 711 | 7.64e-163 | 486 |
| MS.gene60302.t1 | AT5G20360 | 39.478 | 689 | 386 | 13 | 38 | 705 | 33 | 711 | 7.64e-163 | 486 |
| MS.gene60302.t1 | AT5G20360 | 39.478 | 689 | 386 | 13 | 38 | 705 | 63 | 741 | 9.07e-163 | 487 |
| MS.gene60302.t1 | AT5G20360 | 39.478 | 689 | 386 | 13 | 38 | 705 | 63 | 741 | 9.07e-163 | 487 |
| MS.gene60302.t1 | AT5G20360 | 39.478 | 689 | 386 | 13 | 38 | 705 | 113 | 791 | 1.10e-161 | 486 |
| MS.gene60302.t1 | AT5G20360 | 39.478 | 689 | 386 | 13 | 38 | 705 | 123 | 801 | 1.37e-161 | 486 |
| MS.gene60302.t1 | AT5G20360 | 39.478 | 689 | 386 | 13 | 38 | 705 | 123 | 801 | 1.37e-161 | 486 |
| MS.gene60302.t1 | AT1G62390 | 37.464 | 702 | 366 | 10 | 31 | 662 | 41 | 739 | 2.18e-145 | 442 |
| MS.gene60302.t1 | AT3G58620 | 36.885 | 122 | 70 | 3 | 45 | 166 | 453 | 567 | 4.27e-12 | 70.1 |
| MS.gene60302.t1 | AT3G58620 | 36.885 | 122 | 70 | 3 | 45 | 166 | 453 | 567 | 4.85e-12 | 69.7 |
| MS.gene60302.t1 | AT4G30480 | 34.532 | 139 | 78 | 4 | 41 | 169 | 105 | 240 | 1.17e-11 | 66.6 |
Find 184 sgRNAs with CRISPR-Local
Find 213 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTTGGCTTTGTTTAAT+TGG | 0.077180 | 1.1:+8308350 | MS.gene60302:CDS |
| TGCTTTGGCTTTGTTTAATT+GGG | 0.159575 | 1.1:+8308351 | MS.gene60302:CDS |
| TAATGCACAGTTAGAGAAAA+TGG | 0.163980 | 1.1:+8308753 | MS.gene60302:CDS |
| TTCTTGTTGTTGTTTGATTT+TGG | 0.181726 | 1.1:-8307074 | None:intergenic |
| GGCGTTGAATCGGTTGGATT+TGG | 0.260217 | 1.1:+8307415 | MS.gene60302:CDS |
| GGATAGGTATCCGGGGTTAA+AGG | 0.285842 | 1.1:+8307910 | MS.gene60302:CDS |
| CGCGGTTTAGGAAAGTTGTT+AGG | 0.290109 | 1.1:+8307597 | MS.gene60302:CDS |
| ACAATAAGGTGCCCCATAAA+AGG | 0.298701 | 1.1:-8308852 | None:intergenic |
| GCAGAGGACAGCATGGAAAA+AGG | 0.303320 | 1.1:+8308667 | MS.gene60302:CDS |
| GTATATTACGCAGGTGGATT+TGG | 0.326290 | 1.1:+8308039 | MS.gene60302:CDS |
| GTTTGATTCTGATTCGTATC+TGG | 0.333235 | 1.1:+8308216 | MS.gene60302:CDS |
| ATAAGGGTGTTGGGGCTAAT+AGG | 0.333240 | 1.1:+8308134 | MS.gene60302:CDS |
| TACGCAGGTGGATTTGGATA+TGG | 0.341945 | 1.1:+8308045 | MS.gene60302:CDS |
| GTGAGGTGAGAGGGGAGAAT+GGG | 0.343540 | 1.1:+8308098 | MS.gene60302:CDS |
| GGGGAATGTTCACTTGTCTA+AGG | 0.350249 | 1.1:+8308372 | MS.gene60302:CDS |
| TGATAGTTTGAGGATTACTA+TGG | 0.351621 | 1.1:+8307502 | MS.gene60302:CDS |
| TAAGGATAGGGAAGGTGATT+TGG | 0.357323 | 1.1:+8307949 | MS.gene60302:CDS |
| AGCCGCCTGCTGCGCGGTTT+AGG | 0.357668 | 1.1:+8307585 | MS.gene60302:CDS |
| GTTTCAAGAGATGGCTGCTT+TGG | 0.361028 | 1.1:+8308336 | MS.gene60302:CDS |
| TCCAACGCAGTTGAATTATT+CGG | 0.366515 | 1.1:-8307473 | None:intergenic |
| TATTAGATGGGCGCAGTTGC+CGG | 0.370574 | 1.1:+8307850 | MS.gene60302:CDS |
| GGGTGTTCTTGTGAAGTATA+AGG | 0.372992 | 1.1:+8307931 | MS.gene60302:CDS |
| ACCAACATGGGAGGAATGTT+TGG | 0.374580 | 1.1:+8308909 | MS.gene60302:CDS |
| GGCCATGTGTTATATGCAAT+TGG | 0.379545 | 1.1:+8307292 | MS.gene60302:CDS |
| AAGAAGAAGAAAGGGCATAA+AGG | 0.384960 | 1.1:+8307632 | MS.gene60302:CDS |
| TTCTGAAGAAGCTGAAGATC+AGG | 0.386284 | 1.1:+8308804 | MS.gene60302:CDS |
| AGGACTGTGAAGTTGATATA+TGG | 0.388536 | 1.1:+8307821 | MS.gene60302:CDS |
| GGATAGTAACGAAGTTGTTA+AGG | 0.389904 | 1.1:+8307781 | MS.gene60302:CDS |
| GGCTGTTTAAGAACCATGTT+GGG | 0.393596 | 1.1:+8308194 | MS.gene60302:CDS |
| TATATGGAGAGGATATTAGA+TGG | 0.397585 | 1.1:+8307837 | MS.gene60302:CDS |
| ATGGGCTACGAAGGAGTATA+AGG | 0.401726 | 1.1:+8308468 | MS.gene60302:CDS |
| AAGATTAATAAGAAGAAGAA+AGG | 0.408833 | 1.1:+8307623 | MS.gene60302:CDS |
| GAGAAGGAGATAAGGGTGTT+GGG | 0.411879 | 1.1:+8308125 | MS.gene60302:CDS |
| TGAGTAGTGGTGAGGTGAGA+GGG | 0.413021 | 1.1:+8308089 | MS.gene60302:CDS |
| TACGAGGGACTCCTAGCTCT+TGG | 0.413739 | 1.1:+8308538 | MS.gene60302:CDS |
| TGATGAGACTGAGATTGCTT+TGG | 0.414076 | 1.1:+8307544 | MS.gene60302:CDS |
| AACAGAACGCTCATACAATA+AGG | 0.415328 | 1.1:-8308866 | None:intergenic |
| GGTGAGGTGAGAGGGGAGAA+TGG | 0.419918 | 1.1:+8308097 | MS.gene60302:CDS |
| GTGAGAGGGGAGAATGGGGT+TGG | 0.422494 | 1.1:+8308103 | MS.gene60302:CDS |
| ATTGAGGAACAGCGTTTGAA+TGG | 0.424825 | 1.1:+8308709 | MS.gene60302:CDS |
| GGGGAGAATGGGGTTGGAGA+AGG | 0.425637 | 1.1:+8308109 | MS.gene60302:CDS |
| AAATGTTAATGTTAATGTTA+AGG | 0.428883 | 1.1:+8307715 | MS.gene60302:CDS |
| TGGAGATTCTTGATAGTTTG+AGG | 0.428936 | 1.1:+8307492 | MS.gene60302:CDS |
| AGCTGCAGAACCTCCTCAAA+AGG | 0.429826 | 1.1:-8308634 | None:intergenic |
| TGTGATAAGGGATAGGTATC+CGG | 0.440872 | 1.1:+8307901 | MS.gene60302:CDS |
| AAAATTGTTCCAGGATGTAA+TGG | 0.443210 | 1.1:-8309241 | None:intergenic |
| GAAGGATAAGGTTACGGATA+AGG | 0.446110 | 1.1:+8307754 | MS.gene60302:CDS |
| CTCGACCCGTCTTCCTGAAA+AGG | 0.446613 | 1.1:-8308409 | None:intergenic |
| ATCTGGATATTCATGAGGTT+GGG | 0.451158 | 1.1:+8308233 | MS.gene60302:CDS |
| GGTTGGGATGAAGATATATT+CGG | 0.451414 | 1.1:+8308249 | MS.gene60302:CDS |
| TGGGGTTGGAGAAGGAGATA+AGG | 0.452188 | 1.1:+8308117 | MS.gene60302:CDS |
| TGTTATATGCAATTGGGTCT+TGG | 0.453077 | 1.1:+8307299 | MS.gene60302:CDS |
| GTGATAAGGGATAGGTATCC+GGG | 0.453408 | 1.1:+8307902 | MS.gene60302:CDS |
| AGGATTACTATGGAGGAGAA+AGG | 0.457524 | 1.1:+8307512 | MS.gene60302:CDS |
| AACATTAACATTTCCAACAT+TGG | 0.459292 | 1.1:-8307705 | None:intergenic |
| AACAATAAGAATATCGAAGT+TGG | 0.461398 | 1.1:+8308610 | MS.gene60302:CDS |
| ACGAGGGACTCCTAGCTCTT+GGG | 0.465698 | 1.1:+8308539 | MS.gene60302:CDS |
| GCTGAGGGTTGTCATGTGCT+TGG | 0.466822 | 1.1:+8308004 | MS.gene60302:CDS |
| GGGTGAAGATTCGAAGGATA+AGG | 0.466903 | 1.1:+8307742 | MS.gene60302:CDS |
| GCTTTGGCTTTGTTTAATTG+GGG | 0.471043 | 1.1:+8308352 | MS.gene60302:CDS |
| TATCTGGATATTCATGAGGT+TGG | 0.472474 | 1.1:+8308232 | MS.gene60302:CDS |
| GTTGGTGAGAGATGTGATAA+GGG | 0.473972 | 1.1:+8307889 | MS.gene60302:CDS |
| GTCATGTGCTTGGTTCGATC+CGG | 0.477175 | 1.1:+8308014 | MS.gene60302:CDS |
| GATAGGTATCCGGGGTTAAA+GGG | 0.478058 | 1.1:+8307911 | MS.gene60302:CDS |
| AGATTAATAAGAAGAAGAAA+GGG | 0.479602 | 1.1:+8307624 | MS.gene60302:CDS |
| AGATCGATGGGGAAACCAGC+TGG | 0.483060 | 1.1:+8307029 | None:intergenic |
| GGGGTTGGAGAAGGAGATAA+GGG | 0.485908 | 1.1:+8308118 | MS.gene60302:CDS |
| AATGCACAGTTAGAGAAAAT+GGG | 0.486916 | 1.1:+8308754 | MS.gene60302:CDS |
| GGAGAAGGAGATAAGGGTGT+TGG | 0.487702 | 1.1:+8308124 | MS.gene60302:CDS |
| TTGAGCAAGCAAAGCTATGC+TGG | 0.490157 | 1.1:+8308572 | MS.gene60302:CDS |
| CCACCTGCGTAATATACAAC+CGG | 0.493909 | 1.1:-8308033 | None:intergenic |
| GAGTAGTGGTGAGGTGAGAG+GGG | 0.494532 | 1.1:+8308090 | MS.gene60302:CDS |
| AGTGTTACGAGGCGTTGAAT+CGG | 0.494656 | 1.1:+8307405 | MS.gene60302:CDS |
| TCACAAGAATTAAGAGAAGA+AGG | 0.494937 | 1.1:+8307155 | MS.gene60302:CDS |
| TAAGGTTACGGATAAGGATA+AGG | 0.497434 | 1.1:+8307760 | MS.gene60302:CDS |
| AGTTGGTGAGAGATGTGATA+AGG | 0.498390 | 1.1:+8307888 | MS.gene60302:CDS |
| TCCAGGATGTAATGGAGTCT+TGG | 0.500662 | 1.1:-8309233 | None:intergenic |
| TTCTGAGTTGAGGTTAGCTG+AGG | 0.503420 | 1.1:+8307988 | MS.gene60302:CDS |
| GAGAAGAAAGCCACCAATGT+TGG | 0.504400 | 1.1:+8307692 | MS.gene60302:CDS |
| CTTTGGCTTTGTTTAATTGG+GGG | 0.508071 | 1.1:+8308353 | MS.gene60302:CDS |
| ATGAGTAGTGGTGAGGTGAG+AGG | 0.509195 | 1.1:+8308088 | MS.gene60302:CDS |
| GTTGATGTGGGAGGAGATTG+AGG | 0.511356 | 1.1:+8308693 | MS.gene60302:CDS |
| GGATTACTATGGAGGAGAAA+GGG | 0.511446 | 1.1:+8307513 | MS.gene60302:CDS |
| TTACGAGGCGTTGAATCGGT+TGG | 0.511704 | 1.1:+8307409 | MS.gene60302:CDS |
| GAAGATATATTCGGAGGCGA+TGG | 0.514826 | 1.1:+8308258 | MS.gene60302:CDS |
| AGGAAGATAAAGCGGTTACT+AGG | 0.515733 | 1.1:+8307801 | MS.gene60302:CDS |
| TCTGTTGTGGAATTTAAGCT+AGG | 0.515915 | 1.1:+8308883 | MS.gene60302:CDS |
| GACTCGAACCATTGTTTCGT+CGG | 0.516704 | 1.1:+8309204 | MS.gene60302:CDS |
| ATGTTAATGCTGGATATGAA+TGG | 0.519626 | 1.1:+8308449 | MS.gene60302:CDS |
| AATGTCAGTTGTAGAAGCTC+CGG | 0.523785 | 1.1:-8308959 | None:intergenic |
| AGGCTGTTTAAGAACCATGT+TGG | 0.526266 | 1.1:+8308193 | MS.gene60302:CDS |
| GCCGAATAATTCAACTGCGT+TGG | 0.526616 | 1.1:+8307472 | MS.gene60302:CDS |
| AATGGTTCGAGTCGGAAAGT+TGG | 0.527329 | 1.1:-8309194 | None:intergenic |
| TCTCTCGAGCATGTTAATGC+TGG | 0.529882 | 1.1:+8308439 | MS.gene60302:CDS |
| TGCGGATAAGTTTCAAGAGA+TGG | 0.533330 | 1.1:+8308327 | MS.gene60302:CDS |
| GCGGTTTAGGAAAGTTGTTA+GGG | 0.534543 | 1.1:+8307598 | MS.gene60302:CDS |
| AGATTCGAAGGATAAGGTTA+CGG | 0.534915 | 1.1:+8307748 | MS.gene60302:CDS |
| ACTTTCCTAAACCGCGCAGC+AGG | 0.535349 | 1.1:-8307590 | None:intergenic |
| TAGTTTGAGGATTACTATGG+AGG | 0.535558 | 1.1:+8307505 | MS.gene60302:CDS |
| GTTGAAAAGTTTGAACTAGC+CGG | 0.537285 | 1.1:+8308940 | MS.gene60302:CDS |
| AGGAGTCCCTCGTAGAAGTC+CGG | 0.537617 | 1.1:-8308529 | None:intergenic |
| TGAGAGATGTGATAAGGGAT+AGG | 0.541480 | 1.1:+8307894 | MS.gene60302:CDS |
| GCATGGAATGAGATGTATGA+TGG | 0.545970 | 1.1:+8309155 | MS.gene60302:CDS |
| TTGCTGTTTCATTAGAACAA+TGG | 0.546528 | 1.1:-8308999 | None:intergenic |
| AGAATCTGTGAAAATCAAAC+CGG | 0.549691 | 1.1:+8308510 | MS.gene60302:CDS |
| ATTAACATTTCCAACATTGG+TGG | 0.550948 | 1.1:-8307702 | None:intergenic |
| TCTGAGTTGAGGTTAGCTGA+GGG | 0.552191 | 1.1:+8307989 | MS.gene60302:CDS |
| GATATATTCGGAGGCGATGG+AGG | 0.553793 | 1.1:+8308261 | MS.gene60302:CDS |
| GGATGATTACTGTGGAGGAA+TGG | 0.555855 | 1.1:+8308155 | MS.gene60302:CDS |
| GGTGAAGGGTGAAGATTCGA+AGG | 0.556597 | 1.1:+8307736 | MS.gene60302:CDS |
| TTCTTGTGAAGTATAAGGAT+AGG | 0.556963 | 1.1:+8307936 | MS.gene60302:CDS |
| TCGATGACATAGTGCAAGCA+TGG | 0.557013 | 1.1:+8309138 | MS.gene60302:CDS |
| GCCATGTGTTATATGCAATT+GGG | 0.559073 | 1.1:+8307293 | MS.gene60302:CDS |
| ATTCAACGCCTCGTAACACT+TGG | 0.561428 | 1.1:-8307402 | None:intergenic |
| GCTGCAGAACCTCCTCAAAA+GGG | 0.561685 | 1.1:-8308633 | None:intergenic |
| AAGTAGAGCCGCCTGCTGCG+CGG | 0.563860 | 1.1:+8307579 | MS.gene60302:CDS |
| ACAAGAACACCCTTTAACCC+CGG | 0.566730 | 1.1:-8307920 | None:intergenic |
| TGAGGTGAGAGGGGAGAATG+GGG | 0.567723 | 1.1:+8308099 | MS.gene60302:CDS |
| TCTTGTGAAGTATAAGGATA+GGG | 0.568474 | 1.1:+8307937 | MS.gene60302:CDS |
| AATGTTAATGTTAAGGTGAA+GGG | 0.568909 | 1.1:+8307722 | MS.gene60302:CDS |
| GGAACACGCCGACGAAACAA+TGG | 0.570618 | 1.1:-8309212 | None:intergenic |
| AACATGGGAGGAATGTTTGG+AGG | 0.573058 | 1.1:+8308912 | MS.gene60302:CDS |
| CATATAACACATGGCCATGT+TGG | 0.573374 | 1.1:-8307285 | None:intergenic |
| AAGAAAGGGCATAAAGGAGA+AGG | 0.575305 | 1.1:+8307638 | MS.gene60302:CDS |
| ACTGTTGATACCCAAGAGCT+AGG | 0.576141 | 1.1:-8308549 | None:intergenic |
| AAGGAGAAGGCGAGGAAGAG+CGG | 0.579153 | 1.1:+8307651 | MS.gene60302:CDS |
| TCCAAGACTCCATTACATCC+TGG | 0.582606 | 1.1:+8309232 | MS.gene60302:CDS |
| TTACTACTACTTCTGAGTTG+AGG | 0.582702 | 1.1:+8307978 | MS.gene60302:CDS |
| GAGGATTCAGTGACGAATGA+TGG | 0.587808 | 1.1:+8308280 | MS.gene60302:CDS |
| TAATGTTAATGTTAAGGTGA+AGG | 0.589069 | 1.1:+8307721 | MS.gene60302:CDS |
| AATGGCTTGTTCAGTTTGCG+AGG | 0.590314 | 1.1:+8308173 | MS.gene60302:CDS |
| TGTTAATGCTGGATATGAAT+GGG | 0.591430 | 1.1:+8308450 | MS.gene60302:CDS |
| TCCAAACATTCCTCCCATGT+TGG | 0.593550 | 1.1:-8308910 | None:intergenic |
| TTAGAGAAAATGGGTTTGCA+CGG | 0.595862 | 1.1:+8308763 | MS.gene60302:CDS |
| AGAAGGAGATAAGGGTGTTG+GGG | 0.600333 | 1.1:+8308126 | MS.gene60302:CDS |
| TTCCTAAACCGCGCAGCAGG+CGG | 0.600423 | 1.1:-8307587 | None:intergenic |
| ATATGGAGAGGATATTAGAT+GGG | 0.603947 | 1.1:+8307838 | MS.gene60302:CDS |
| TAATAGGATGATTACTGTGG+AGG | 0.608454 | 1.1:+8308150 | MS.gene60302:CDS |
| TTGCACTCGTTAATCGCTCG+AGG | 0.610141 | 1.1:-8307329 | None:intergenic |
| TAACAAGGCAGAGGACAGCA+TGG | 0.611758 | 1.1:+8308660 | MS.gene60302:CDS |
| GGTGAATTGTAGTATGAAGT+TGG | 0.612990 | 1.1:+8307871 | MS.gene60302:CDS |
| AGAAGAGCTTTACTATACCT+CGG | 0.613368 | 1.1:-8307371 | None:intergenic |
| ATCAAACCGGACTTCTACGA+GGG | 0.616046 | 1.1:+8308523 | MS.gene60302:CDS |
| ATTGTATGAGCGTTCTGTTG+TGG | 0.617025 | 1.1:+8308870 | MS.gene60302:CDS |
| AACTTCATACTACAATTCAC+CGG | 0.617885 | 1.1:-8307869 | None:intergenic |
| GGTTCTGCAGCTCTATAACA+AGG | 0.619781 | 1.1:+8308645 | MS.gene60302:CDS |
| AAAAGGGATGTTGATGTGGG+AGG | 0.621444 | 1.1:+8308684 | MS.gene60302:CDS |
| TTGTTCTAATGAAACAGCAA+TGG | 0.622294 | 1.1:+8309002 | MS.gene60302:CDS |
| AGGGCATAAAGGAGAAGGCG+AGG | 0.623032 | 1.1:+8307643 | MS.gene60302:CDS |
| CCGGTTGTATATTACGCAGG+TGG | 0.623338 | 1.1:+8308033 | MS.gene60302:CDS |
| TTCGTATCTGGATATTCATG+AGG | 0.624473 | 1.1:+8308228 | MS.gene60302:CDS |
| TCTAATGAAACAGCAATGGA+AGG | 0.625596 | 1.1:+8309006 | MS.gene60302:CDS |
| AATCAGAATCAAACCCAACA+TGG | 0.625835 | 1.1:-8308207 | None:intergenic |
| AGTTGTTAAGGAAGATAAAG+CGG | 0.626540 | 1.1:+8307793 | MS.gene60302:CDS |
| TGGATATGAATGGGCTACGA+AGG | 0.626647 | 1.1:+8308459 | MS.gene60302:CDS |
| GTGAAGTATAAGGATAGGGA+AGG | 0.628310 | 1.1:+8307941 | MS.gene60302:CDS |
| TTAAGCTAGGACTACCAACA+TGG | 0.632474 | 1.1:+8308896 | MS.gene60302:CDS |
| GCAGCTCTATAACAAGGCAG+AGG | 0.632813 | 1.1:+8308651 | MS.gene60302:CDS |
| AAGATCAGGCTTCAAAGATG+AGG | 0.634249 | 1.1:+8308818 | MS.gene60302:CDS |
| GATCCGGTTGTATATTACGC+AGG | 0.635696 | 1.1:+8308030 | MS.gene60302:CDS |
| TGCACATCTTCACACCAACA+TGG | 0.638664 | 1.1:+8307271 | MS.gene60302:CDS |
| TTGTGACATGTTGATGAACA+TGG | 0.639131 | 1.1:-8307138 | None:intergenic |
| TCAAACAACAACAAGAACAA+AGG | 0.642821 | 1.1:+8307080 | MS.gene60302:CDS |
| TGTGAAGTTGATATATGGAG+AGG | 0.643074 | 1.1:+8307826 | MS.gene60302:CDS |
| GACGAAACAATGGTTCGAGT+CGG | 0.643395 | 1.1:-8309202 | None:intergenic |
| AGAGCTGTTTGATATTGCTG+CGG | 0.643756 | 1.1:+8308309 | MS.gene60302:CDS |
| TAGAAGAGCCAAGTGTTACG+AGG | 0.646607 | 1.1:+8307394 | MS.gene60302:CDS |
| TGCACTCGTTAATCGCTCGA+GGG | 0.647015 | 1.1:-8307328 | None:intergenic |
| GGAGCTTCTACAACTGACAT+TGG | 0.653645 | 1.1:+8308961 | MS.gene60302:CDS |
| ATGTTCACTTGTCTAAGGCG+AGG | 0.655166 | 1.1:+8308377 | MS.gene60302:CDS |
| CATGGAATGAGATGTATGAT+GGG | 0.662583 | 1.1:+8309156 | MS.gene60302:CDS |
| ACCCAATTGCATATAACACA+TGG | 0.669146 | 1.1:-8307294 | None:intergenic |
| TATGATGAAAAGATGAGTAG+TGG | 0.669294 | 1.1:+8308076 | MS.gene60302:CDS |
| TGATAAGGGATAGGTATCCG+GGG | 0.671748 | 1.1:+8307903 | MS.gene60302:CDS |
| TAAGCTAGGACTACCAACAT+GGG | 0.675321 | 1.1:+8308897 | MS.gene60302:CDS |
| TTCACTTGTCTAAGGCGAGG+AGG | 0.676418 | 1.1:+8308380 | MS.gene60302:CDS |
| TTGCTCTGCAAGTTTCGCCG+AGG | 0.682933 | 1.1:+8307354 | MS.gene60302:CDS |
| TGGGATGAAGATATATTCGG+AGG | 0.690271 | 1.1:+8308252 | MS.gene60302:CDS |
| TGAAAAGATGAGTAGTGGTG+AGG | 0.697497 | 1.1:+8308081 | MS.gene60302:CDS |
| GGCTAATAGGATGATTACTG+TGG | 0.700839 | 1.1:+8308147 | MS.gene60302:CDS |
| AATCAAACCGGACTTCTACG+AGG | 0.700981 | 1.1:+8308522 | MS.gene60302:CDS |
| GAAGATGTGCAACATCTATG+TGG | 0.701400 | 1.1:-8307259 | None:intergenic |
| GCTAGGACTACCAACATGGG+AGG | 0.703040 | 1.1:+8308900 | MS.gene60302:CDS |
| GGAATGAGATGTATGATGGG+TGG | 0.713527 | 1.1:+8309159 | MS.gene60302:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAAATATTTGAAACATAAA+AGG | - | chr1.1:8309077-8309096 | None:intergenic | 10.0% |
| !!! | TTTATGTTTCAAATATTTTA+GGG | + | chr1.1:8309077-8309096 | MS.gene60302:intron | 10.0% |
| !!! | TTTTATGTTTCAAATATTTT+AGG | + | chr1.1:8309076-8309095 | MS.gene60302:intron | 10.0% |
| !! | AAATGTTAATGTTAATGTTA+AGG | + | chr1.1:8307715-8307734 | MS.gene60302:CDS | 15.0% |
| !! | AAGATTAATAAGAAGAAGAA+AGG | + | chr1.1:8307623-8307642 | MS.gene60302:CDS | 20.0% |
| !! | AGATTAATAAGAAGAAGAAA+GGG | + | chr1.1:8307624-8307643 | MS.gene60302:CDS | 20.0% |
| ! | AACAATAAGAATATCGAAGT+TGG | + | chr1.1:8308610-8308629 | MS.gene60302:CDS | 25.0% |
| ! | AACATTAACATTTCCAACAT+TGG | - | chr1.1:8307708-8307727 | None:intergenic | 25.0% |
| ! | AATGTTAATGTTAAGGTGAA+GGG | + | chr1.1:8307722-8307741 | MS.gene60302:CDS | 25.0% |
| ! | TAATGTTAATGTTAAGGTGA+AGG | + | chr1.1:8307721-8307740 | MS.gene60302:CDS | 25.0% |
| !! | ATACAGATATACCTTTTATG+GGG | + | chr1.1:8308841-8308860 | MS.gene60302:CDS | 25.0% |
| !! | GATACAGATATACCTTTTAT+GGG | + | chr1.1:8308840-8308859 | MS.gene60302:CDS | 25.0% |
| !!! | TTCTTGTTGTTGTTTGATTT+TGG | - | chr1.1:8307077-8307096 | None:intergenic | 25.0% |
| AAAATTGTTCCAGGATGTAA+TGG | - | chr1.1:8309244-8309263 | None:intergenic | 30.0% | |
| AACTTCATACTACAATTCAC+CGG | - | chr1.1:8307872-8307891 | None:intergenic | 30.0% | |
| AATGCACAGTTAGAGAAAAT+GGG | + | chr1.1:8308754-8308773 | MS.gene60302:CDS | 30.0% | |
| AGAATCTGTGAAAATCAAAC+CGG | + | chr1.1:8308510-8308529 | MS.gene60302:CDS | 30.0% | |
| AGTTGTTAAGGAAGATAAAG+CGG | + | chr1.1:8307793-8307812 | MS.gene60302:CDS | 30.0% | |
| ATATGGAGAGGATATTAGAT+GGG | + | chr1.1:8307838-8307857 | MS.gene60302:CDS | 30.0% | |
| ATGTTAATGCTGGATATGAA+TGG | + | chr1.1:8308449-8308468 | MS.gene60302:CDS | 30.0% | |
| ATTAACATTTCCAACATTGG+TGG | - | chr1.1:8307705-8307724 | None:intergenic | 30.0% | |
| TAATGCACAGTTAGAGAAAA+TGG | + | chr1.1:8308753-8308772 | MS.gene60302:CDS | 30.0% | |
| TATATGGAGAGGATATTAGA+TGG | + | chr1.1:8307837-8307856 | MS.gene60302:CDS | 30.0% | |
| TATGATGAAAAGATGAGTAG+TGG | + | chr1.1:8308076-8308095 | MS.gene60302:CDS | 30.0% | |
| TCAAACAACAACAAGAACAA+AGG | + | chr1.1:8307080-8307099 | MS.gene60302:CDS | 30.0% | |
| TCACAAGAATTAAGAGAAGA+AGG | + | chr1.1:8307155-8307174 | MS.gene60302:CDS | 30.0% | |
| TCTTGTGAAGTATAAGGATA+GGG | + | chr1.1:8307937-8307956 | MS.gene60302:CDS | 30.0% | |
| TGATAGTTTGAGGATTACTA+TGG | + | chr1.1:8307502-8307521 | MS.gene60302:CDS | 30.0% | |
| TGTTAATGCTGGATATGAAT+GGG | + | chr1.1:8308450-8308469 | MS.gene60302:CDS | 30.0% | |
| TTCCAAAAAAAAGACAACGA+AGG | + | chr1.1:8307191-8307210 | MS.gene60302:CDS | 30.0% | |
| TTCTTGTGAAGTATAAGGAT+AGG | + | chr1.1:8307936-8307955 | MS.gene60302:CDS | 30.0% | |
| TTGTTCTAATGAAACAGCAA+TGG | + | chr1.1:8309002-8309021 | MS.gene60302:CDS | 30.0% | |
| ! | CTCATCTTTTCATCATAACA+CGG | - | chr1.1:8308073-8308092 | None:intergenic | 30.0% |
| ! | GGATACAGATATACCTTTTA+TGG | + | chr1.1:8308839-8308858 | MS.gene60302:CDS | 30.0% |
| !! | AAACCACTTTTCATGATTAC+AGG | + | chr1.1:8309107-8309126 | MS.gene60302:intron | 30.0% |
| !! | AACCACTTTTCATGATTACA+GGG | + | chr1.1:8309108-8309127 | MS.gene60302:intron | 30.0% |
| !! | TGCTTTGGCTTTGTTTAATT+GGG | + | chr1.1:8308351-8308370 | MS.gene60302:CDS | 30.0% |
| !! | TTGCTGTTTCATTAGAACAA+TGG | - | chr1.1:8309002-8309021 | None:intergenic | 30.0% |
| AACAGAACGCTCATACAATA+AGG | - | chr1.1:8308869-8308888 | None:intergenic | 35.0% | |
| AACCCTGTAATCATGAAAAG+TGG | - | chr1.1:8309113-8309132 | None:intergenic | 35.0% | |
| AATCAGAATCAAACCCAACA+TGG | - | chr1.1:8308210-8308229 | None:intergenic | 35.0% | |
| ACCCAATTGCATATAACACA+TGG | - | chr1.1:8307297-8307316 | None:intergenic | 35.0% | |
| AGAAGAGCTTTACTATACCT+CGG | - | chr1.1:8307374-8307393 | None:intergenic | 35.0% | |
| AGATTCGAAGGATAAGGTTA+CGG | + | chr1.1:8307748-8307767 | MS.gene60302:CDS | 35.0% | |
| ATCTGGATATTCATGAGGTT+GGG | + | chr1.1:8308233-8308252 | MS.gene60302:CDS | 35.0% | |
| CATGGAATGAGATGTATGAT+GGG | + | chr1.1:8309156-8309175 | MS.gene60302:CDS | 35.0% | |
| GCCATGTGTTATATGCAATT+GGG | + | chr1.1:8307293-8307312 | MS.gene60302:CDS | 35.0% | |
| GGATAGTAACGAAGTTGTTA+AGG | + | chr1.1:8307781-8307800 | MS.gene60302:CDS | 35.0% | |
| GGTGAATTGTAGTATGAAGT+TGG | + | chr1.1:8307871-8307890 | MS.gene60302:CDS | 35.0% | |
| GGTTGGGATGAAGATATATT+CGG | + | chr1.1:8308249-8308268 | MS.gene60302:CDS | 35.0% | |
| GTTGAAAAGTTTGAACTAGC+CGG | + | chr1.1:8308940-8308959 | MS.gene60302:CDS | 35.0% | |
| TAAGGTTACGGATAAGGATA+AGG | + | chr1.1:8307760-8307779 | MS.gene60302:CDS | 35.0% | |
| TAATAGGATGATTACTGTGG+AGG | + | chr1.1:8308150-8308169 | MS.gene60302:CDS | 35.0% | |
| TAGTTTGAGGATTACTATGG+AGG | + | chr1.1:8307505-8307524 | MS.gene60302:CDS | 35.0% | |
| TATCTGGATATTCATGAGGT+TGG | + | chr1.1:8308232-8308251 | MS.gene60302:CDS | 35.0% | |
| TCCAACGCAGTTGAATTATT+CGG | - | chr1.1:8307476-8307495 | None:intergenic | 35.0% | |
| TCTAATGAAACAGCAATGGA+AGG | + | chr1.1:8309006-8309025 | MS.gene60302:CDS | 35.0% | |
| TCTGTTGTGGAATTTAAGCT+AGG | + | chr1.1:8308883-8308902 | MS.gene60302:CDS | 35.0% | |
| TGTTATATGCAATTGGGTCT+TGG | + | chr1.1:8307299-8307318 | MS.gene60302:CDS | 35.0% | |
| TTACTACTACTTCTGAGTTG+AGG | + | chr1.1:8307978-8307997 | MS.gene60302:CDS | 35.0% | |
| TTCGTATCTGGATATTCATG+AGG | + | chr1.1:8308228-8308247 | MS.gene60302:CDS | 35.0% | |
| ! | AAGAAGAAGAAAGGGCATAA+AGG | + | chr1.1:8307632-8307651 | MS.gene60302:CDS | 35.0% |
| ! | GCAACATCTATGTGGTTTTT+GGG | - | chr1.1:8307254-8307273 | None:intergenic | 35.0% |
| ! | GTTTGATTCTGATTCGTATC+TGG | + | chr1.1:8308216-8308235 | MS.gene60302:CDS | 35.0% |
| ! | TGCAACATCTATGTGGTTTT+TGG | - | chr1.1:8307255-8307274 | None:intergenic | 35.0% |
| ! | TGGAGATTCTTGATAGTTTG+AGG | + | chr1.1:8307492-8307511 | MS.gene60302:CDS | 35.0% |
| ! | TTAGAGAAAATGGGTTTGCA+CGG | + | chr1.1:8308763-8308782 | MS.gene60302:CDS | 35.0% |
| ! | TTGTGACATGTTGATGAACA+TGG | - | chr1.1:8307141-8307160 | None:intergenic | 35.0% |
| !! | AGGACTGTGAAGTTGATATA+TGG | + | chr1.1:8307821-8307840 | MS.gene60302:CDS | 35.0% |
| !! | CTGCTTTGGCTTTGTTTAAT+TGG | + | chr1.1:8308350-8308369 | MS.gene60302:CDS | 35.0% |
| !! | CTTTGGCTTTGTTTAATTGG+GGG | + | chr1.1:8308353-8308372 | MS.gene60302:CDS | 35.0% |
| !! | GCTTTGGCTTTGTTTAATTG+GGG | + | chr1.1:8308352-8308371 | MS.gene60302:CDS | 35.0% |
| !! | TGTGAAGTTGATATATGGAG+AGG | + | chr1.1:8307826-8307845 | MS.gene60302:CDS | 35.0% |
| !!! | CTCCTTCGTTGTCTTTTTTT+TGG | - | chr1.1:8307196-8307215 | None:intergenic | 35.0% |
| !!! | GTTTTTGGGTAAGAGTTTGA+GGG | - | chr1.1:8307240-8307259 | None:intergenic | 35.0% |
| AAGATCAGGCTTCAAAGATG+AGG | + | chr1.1:8308818-8308837 | MS.gene60302:CDS | 40.0% | |
| AATGTCAGTTGTAGAAGCTC+CGG | - | chr1.1:8308962-8308981 | None:intergenic | 40.0% | |
| AGAGCTGTTTGATATTGCTG+CGG | + | chr1.1:8308309-8308328 | MS.gene60302:CDS | 40.0% | |
| AGGAAGATAAAGCGGTTACT+AGG | + | chr1.1:8307801-8307820 | MS.gene60302:CDS | 40.0% | |
| AGGATTACTATGGAGGAGAA+AGG | + | chr1.1:8307512-8307531 | MS.gene60302:CDS | 40.0% | |
| AGGCTGTTTAAGAACCATGT+TGG | + | chr1.1:8308193-8308212 | MS.gene60302:CDS | 40.0% | |
| ATTGAGGAACAGCGTTTGAA+TGG | + | chr1.1:8308709-8308728 | MS.gene60302:CDS | 40.0% | |
| ATTGTATGAGCGTTCTGTTG+TGG | + | chr1.1:8308870-8308889 | MS.gene60302:CDS | 40.0% | |
| CATATAACACATGGCCATGT+TGG | - | chr1.1:8307288-8307307 | None:intergenic | 40.0% | |
| GAAACCAGCTGGAAAAAAGA+AGG | + | chr1.1:8307040-8307059 | MS.gene60302:CDS | 40.0% | |
| GAAGATGTGCAACATCTATG+TGG | - | chr1.1:8307262-8307281 | None:intergenic | 40.0% | |
| GAAGGATAAGGTTACGGATA+AGG | + | chr1.1:8307754-8307773 | MS.gene60302:CDS | 40.0% | |
| GCATGGAATGAGATGTATGA+TGG | + | chr1.1:8309155-8309174 | MS.gene60302:CDS | 40.0% | |
| GCGGTTTAGGAAAGTTGTTA+GGG | + | chr1.1:8307598-8307617 | MS.gene60302:CDS | 40.0% | |
| GGAAAAAGGGATGTTGATGT+GGG | + | chr1.1:8308681-8308700 | MS.gene60302:CDS | 40.0% | |
| GGATTACTATGGAGGAGAAA+GGG | + | chr1.1:8307513-8307532 | MS.gene60302:CDS | 40.0% | |
| GGCCATGTGTTATATGCAAT+TGG | + | chr1.1:8307292-8307311 | MS.gene60302:CDS | 40.0% | |
| GGCTAATAGGATGATTACTG+TGG | + | chr1.1:8308147-8308166 | MS.gene60302:CDS | 40.0% | |
| GGCTGTTTAAGAACCATGTT+GGG | + | chr1.1:8308194-8308213 | MS.gene60302:CDS | 40.0% | |
| GGGTGTTCTTGTGAAGTATA+AGG | + | chr1.1:8307931-8307950 | MS.gene60302:CDS | 40.0% | |
| GTGAAGTATAAGGATAGGGA+AGG | + | chr1.1:8307941-8307960 | MS.gene60302:CDS | 40.0% | |
| TAAGCTAGGACTACCAACAT+GGG | + | chr1.1:8308897-8308916 | MS.gene60302:CDS | 40.0% | |
| TAAGGATAGGGAAGGTGATT+TGG | + | chr1.1:8307949-8307968 | MS.gene60302:CDS | 40.0% | |
| TGAAAAGATGAGTAGTGGTG+AGG | + | chr1.1:8308081-8308100 | MS.gene60302:CDS | 40.0% | |
| TGAAACAGCAATGGAAGGTA+CGG | + | chr1.1:8309011-8309030 | MS.gene60302:intron | 40.0% | |
| TGAGAGATGTGATAAGGGAT+AGG | + | chr1.1:8307894-8307913 | MS.gene60302:CDS | 40.0% | |
| TGATGAGACTGAGATTGCTT+TGG | + | chr1.1:8307544-8307563 | MS.gene60302:CDS | 40.0% | |
| TGCGGATAAGTTTCAAGAGA+TGG | + | chr1.1:8308327-8308346 | MS.gene60302:CDS | 40.0% | |
| TGGAAAAAGGGATGTTGATG+TGG | + | chr1.1:8308680-8308699 | MS.gene60302:CDS | 40.0% | |
| TGGGATGAAGATATATTCGG+AGG | + | chr1.1:8308252-8308271 | MS.gene60302:CDS | 40.0% | |
| TGTGATAAGGGATAGGTATC+CGG | + | chr1.1:8307901-8307920 | MS.gene60302:CDS | 40.0% | |
| TTAAGCTAGGACTACCAACA+TGG | + | chr1.1:8308896-8308915 | MS.gene60302:CDS | 40.0% | |
| ! | AAGAAAGGGCATAAAGGAGA+AGG | + | chr1.1:8307638-8307657 | MS.gene60302:CDS | 40.0% |
| ! | ACAATAAGGTGCCCCATAAA+AGG | - | chr1.1:8308855-8308874 | None:intergenic | 40.0% |
| ! | GTATATTACGCAGGTGGATT+TGG | + | chr1.1:8308039-8308058 | MS.gene60302:CDS | 40.0% |
| ! | GTTGGTGAGAGATGTGATAA+GGG | + | chr1.1:8307889-8307908 | MS.gene60302:CDS | 40.0% |
| ! | TTCTGAAGAAGCTGAAGATC+AGG | + | chr1.1:8308804-8308823 | MS.gene60302:CDS | 40.0% |
| !! | AGTTGGTGAGAGATGTGATA+AGG | + | chr1.1:8307888-8307907 | MS.gene60302:CDS | 40.0% |
| !!! | GGTTTTTGGGTAAGAGTTTG+AGG | - | chr1.1:8307241-8307260 | None:intergenic | 40.0% |
| !!! | TGTTCCTTCTTTTTTCCAGC+TGG | - | chr1.1:8307047-8307066 | None:intergenic | 40.0% |
| AAAAGGGATGTTGATGTGGG+AGG | + | chr1.1:8308684-8308703 | MS.gene60302:CDS | 45.0% | |
| AACATGGGAGGAATGTTTGG+AGG | + | chr1.1:8308912-8308931 | MS.gene60302:CDS | 45.0% | |
| AATCAAACCGGACTTCTACG+AGG | + | chr1.1:8308522-8308541 | MS.gene60302:CDS | 45.0% | |
| AATGGTTCGAGTCGGAAAGT+TGG | - | chr1.1:8309197-8309216 | None:intergenic | 45.0% | |
| ACAAGAACACCCTTTAACCC+CGG | - | chr1.1:8307923-8307942 | None:intergenic | 45.0% | |
| ACCAACATGGGAGGAATGTT+TGG | + | chr1.1:8308909-8308928 | MS.gene60302:CDS | 45.0% | |
| ACTGTTGATACCCAAGAGCT+AGG | - | chr1.1:8308552-8308571 | None:intergenic | 45.0% | |
| ATCAAACCGGACTTCTACGA+GGG | + | chr1.1:8308523-8308542 | MS.gene60302:CDS | 45.0% | |
| ATTCAACGCCTCGTAACACT+TGG | - | chr1.1:8307405-8307424 | None:intergenic | 45.0% | |
| CAGAGGACAGCATGGAAAAA+GGG | + | chr1.1:8308668-8308687 | MS.gene60302:CDS | 45.0% | |
| CCACCTGCGTAATATACAAC+CGG | - | chr1.1:8308036-8308055 | None:intergenic | 45.0% | |
| CGCGGTTTAGGAAAGTTGTT+AGG | + | chr1.1:8307597-8307616 | MS.gene60302:CDS | 45.0% | |
| GAAGATATATTCGGAGGCGA+TGG | + | chr1.1:8308258-8308277 | MS.gene60302:CDS | 45.0% | |
| GACGAAACAATGGTTCGAGT+CGG | - | chr1.1:8309205-8309224 | None:intergenic | 45.0% | |
| GACTCGAACCATTGTTTCGT+CGG | + | chr1.1:8309204-8309223 | MS.gene60302:CDS | 45.0% | |
| GAGAAGAAAGCCACCAATGT+TGG | + | chr1.1:8307692-8307711 | MS.gene60302:CDS | 45.0% | |
| GAGGATTCAGTGACGAATGA+TGG | + | chr1.1:8308280-8308299 | MS.gene60302:CDS | 45.0% | |
| GATAGGTATCCGGGGTTAAA+GGG | + | chr1.1:8307911-8307930 | MS.gene60302:CDS | 45.0% | |
| GATCCGGTTGTATATTACGC+AGG | + | chr1.1:8308030-8308049 | MS.gene60302:CDS | 45.0% | |
| GCCGAATAATTCAACTGCGT+TGG | + | chr1.1:8307472-8307491 | MS.gene60302:CDS | 45.0% | |
| GGAGCTTCTACAACTGACAT+TGG | + | chr1.1:8308961-8308980 | MS.gene60302:CDS | 45.0% | |
| GGATGATTACTGTGGAGGAA+TGG | + | chr1.1:8308155-8308174 | MS.gene60302:CDS | 45.0% | |
| GGGGAATGTTCACTTGTCTA+AGG | + | chr1.1:8308372-8308391 | MS.gene60302:CDS | 45.0% | |
| GGGTGAAGATTCGAAGGATA+AGG | + | chr1.1:8307742-8307761 | MS.gene60302:CDS | 45.0% | |
| GGTTCTGCAGCTCTATAACA+AGG | + | chr1.1:8308645-8308664 | MS.gene60302:CDS | 45.0% | |
| GTGATAAGGGATAGGTATCC+GGG | + | chr1.1:8307902-8307921 | MS.gene60302:CDS | 45.0% | |
| GTTTCAAGAGATGGCTGCTT+TGG | + | chr1.1:8308336-8308355 | MS.gene60302:CDS | 45.0% | |
| TAGAAGAGCCAAGTGTTACG+AGG | + | chr1.1:8307394-8307413 | MS.gene60302:CDS | 45.0% | |
| TCCAAACATTCCTCCCATGT+TGG | - | chr1.1:8308913-8308932 | None:intergenic | 45.0% | |
| TCCAAGACTCCATTACATCC+TGG | + | chr1.1:8309232-8309251 | MS.gene60302:CDS | 45.0% | |
| TCGATGACATAGTGCAAGCA+TGG | + | chr1.1:8309138-8309157 | MS.gene60302:CDS | 45.0% | |
| TCTCTCGAGCATGTTAATGC+TGG | + | chr1.1:8308439-8308458 | MS.gene60302:CDS | 45.0% | |
| TGATAAGGGATAGGTATCCG+GGG | + | chr1.1:8307903-8307922 | MS.gene60302:CDS | 45.0% | |
| TGCACATCTTCACACCAACA+TGG | + | chr1.1:8307271-8307290 | MS.gene60302:CDS | 45.0% | |
| TTGAGCAAGCAAAGCTATGC+TGG | + | chr1.1:8308572-8308591 | MS.gene60302:CDS | 45.0% | |
| ! | ATGGGCTACGAAGGAGTATA+AGG | + | chr1.1:8308468-8308487 | MS.gene60302:CDS | 45.0% |
| ! | ATGTTCACTTGTCTAAGGCG+AGG | + | chr1.1:8308377-8308396 | MS.gene60302:CDS | 45.0% |
| ! | GAAACAGCAATGGAAGGTAC+GGG | + | chr1.1:8309012-8309031 | MS.gene60302:intron | 45.0% |
| ! | GGAATGAGATGTATGATGGG+TGG | + | chr1.1:8309159-8309178 | MS.gene60302:CDS | 45.0% |
| ! | TACGCAGGTGGATTTGGATA+TGG | + | chr1.1:8308045-8308064 | MS.gene60302:CDS | 45.0% |
| ! | TATCGAAGTTGGCCCTTTTG+AGG | + | chr1.1:8308621-8308640 | MS.gene60302:CDS | 45.0% |
| ! | TCCAGGATGTAATGGAGTCT+TGG | - | chr1.1:8309236-8309255 | None:intergenic | 45.0% |
| ! | TCTGAGTTGAGGTTAGCTGA+GGG | + | chr1.1:8307989-8308008 | MS.gene60302:CDS | 45.0% |
| ! | TTCTGAGTTGAGGTTAGCTG+AGG | + | chr1.1:8307988-8308007 | MS.gene60302:CDS | 45.0% |
| !! | AATGGCTTGTTCAGTTTGCG+AGG | + | chr1.1:8308173-8308192 | MS.gene60302:CDS | 45.0% |
| !! | AGAAGGAGATAAGGGTGTTG+GGG | + | chr1.1:8308126-8308145 | MS.gene60302:CDS | 45.0% |
| !! | AGTGTTACGAGGCGTTGAAT+CGG | + | chr1.1:8307405-8307424 | MS.gene60302:CDS | 45.0% |
| !! | ATAAGGGTGTTGGGGCTAAT+AGG | + | chr1.1:8308134-8308153 | MS.gene60302:CDS | 45.0% |
| !! | GAGAAGGAGATAAGGGTGTT+GGG | + | chr1.1:8308125-8308144 | MS.gene60302:CDS | 45.0% |
| !! | TGGATATGAATGGGCTACGA+AGG | + | chr1.1:8308459-8308478 | MS.gene60302:CDS | 45.0% |
| AGCTGCAGAACCTCCTCAAA+AGG | - | chr1.1:8308637-8308656 | None:intergenic | 50.0% | |
| ATGAGTAGTGGTGAGGTGAG+AGG | + | chr1.1:8308088-8308107 | MS.gene60302:CDS | 50.0% | |
| CCGGTTGTATATTACGCAGG+TGG | + | chr1.1:8308033-8308052 | MS.gene60302:CDS | 50.0% | |
| GATATATTCGGAGGCGATGG+AGG | + | chr1.1:8308261-8308280 | MS.gene60302:CDS | 50.0% | |
| GCAGAGGACAGCATGGAAAA+AGG | + | chr1.1:8308667-8308686 | MS.gene60302:CDS | 50.0% | |
| GCAGCTCTATAACAAGGCAG+AGG | + | chr1.1:8308651-8308670 | MS.gene60302:CDS | 50.0% | |
| GCTGCAGAACCTCCTCAAAA+GGG | - | chr1.1:8308636-8308655 | None:intergenic | 50.0% | |
| GGATAGGTATCCGGGGTTAA+AGG | + | chr1.1:8307910-8307929 | MS.gene60302:CDS | 50.0% | |
| GGGGTTGGAGAAGGAGATAA+GGG | + | chr1.1:8308118-8308137 | MS.gene60302:CDS | 50.0% | |
| GGTGAAGGGTGAAGATTCGA+AGG | + | chr1.1:8307736-8307755 | MS.gene60302:CDS | 50.0% | |
| GTTGATGTGGGAGGAGATTG+AGG | + | chr1.1:8308693-8308712 | MS.gene60302:CDS | 50.0% | |
| TAACAAGGCAGAGGACAGCA+TGG | + | chr1.1:8308660-8308679 | MS.gene60302:CDS | 50.0% | |
| TATTAGATGGGCGCAGTTGC+CGG | + | chr1.1:8307850-8307869 | MS.gene60302:CDS | 50.0% | |
| TGAGTAGTGGTGAGGTGAGA+GGG | + | chr1.1:8308089-8308108 | MS.gene60302:CDS | 50.0% | |
| TGCACTCGTTAATCGCTCGA+GGG | - | chr1.1:8307331-8307350 | None:intergenic | 50.0% | |
| TGGGGTTGGAGAAGGAGATA+AGG | + | chr1.1:8308117-8308136 | MS.gene60302:CDS | 50.0% | |
| TTGCACTCGTTAATCGCTCG+AGG | - | chr1.1:8307332-8307351 | None:intergenic | 50.0% | |
| ! | GGAGAAGGAGATAAGGGTGT+TGG | + | chr1.1:8308124-8308143 | MS.gene60302:CDS | 50.0% |
| ! | GGCGTTGAATCGGTTGGATT+TGG | + | chr1.1:8307415-8307434 | MS.gene60302:CDS | 50.0% |
| ! | GGGTTTGCACGGTCTTTTCA+GGG | + | chr1.1:8308774-8308793 | MS.gene60302:CDS | 50.0% |
| ! | GTCATGTGCTTGGTTCGATC+CGG | + | chr1.1:8308014-8308033 | MS.gene60302:CDS | 50.0% |
| ! | TGGGTTTGCACGGTCTTTTC+AGG | + | chr1.1:8308773-8308792 | MS.gene60302:CDS | 50.0% |
| ! | TTCACTTGTCTAAGGCGAGG+AGG | + | chr1.1:8308380-8308399 | MS.gene60302:CDS | 50.0% |
| !! | CGAGTGCCTTTTCAGGAAGA+CGG | + | chr1.1:8308403-8308422 | MS.gene60302:CDS | 50.0% |
| !! | GAGTGCCTTTTCAGGAAGAC+GGG | + | chr1.1:8308404-8308423 | MS.gene60302:CDS | 50.0% |
| !! | TTACGAGGCGTTGAATCGGT+TGG | + | chr1.1:8307409-8307428 | MS.gene60302:CDS | 50.0% |
| AAGGAGAAGGCGAGGAAGAG+CGG | + | chr1.1:8307651-8307670 | MS.gene60302:CDS | 55.0% | |
| ACTTTCCTAAACCGCGCAGC+AGG | - | chr1.1:8307593-8307612 | None:intergenic | 55.0% | |
| AGGAGTCCCTCGTAGAAGTC+CGG | - | chr1.1:8308532-8308551 | None:intergenic | 55.0% | |
| AGGGCATAAAGGAGAAGGCG+AGG | + | chr1.1:8307643-8307662 | MS.gene60302:CDS | 55.0% | |
| CTCGACCCGTCTTCCTGAAA+AGG | - | chr1.1:8308412-8308431 | None:intergenic | 55.0% | |
| GAGTAGTGGTGAGGTGAGAG+GGG | + | chr1.1:8308090-8308109 | MS.gene60302:CDS | 55.0% | |
| GCTAGGACTACCAACATGGG+AGG | + | chr1.1:8308900-8308919 | MS.gene60302:CDS | 55.0% | |
| GCTGAGGGTTGTCATGTGCT+TGG | + | chr1.1:8308004-8308023 | MS.gene60302:CDS | 55.0% | |
| GGAACACGCCGACGAAACAA+TGG | - | chr1.1:8309215-8309234 | None:intergenic | 55.0% | |
| GTGAGGTGAGAGGGGAGAAT+GGG | + | chr1.1:8308098-8308117 | MS.gene60302:CDS | 55.0% | |
| TGAGGTGAGAGGGGAGAATG+GGG | + | chr1.1:8308099-8308118 | MS.gene60302:CDS | 55.0% | |
| TTGCTCTGCAAGTTTCGCCG+AGG | + | chr1.1:8307354-8307373 | MS.gene60302:CDS | 55.0% | |
| ! | ACGAGGGACTCCTAGCTCTT+GGG | + | chr1.1:8308539-8308558 | MS.gene60302:CDS | 55.0% |
| ! | TACGAGGGACTCCTAGCTCT+TGG | + | chr1.1:8308538-8308557 | MS.gene60302:CDS | 55.0% |
| !! | CGAAGTTGGCCCTTTTGAGG+AGG | + | chr1.1:8308624-8308643 | MS.gene60302:CDS | 55.0% |
| GGGGAGAATGGGGTTGGAGA+AGG | + | chr1.1:8308109-8308128 | MS.gene60302:CDS | 60.0% | |
| GGTGAGGTGAGAGGGGAGAA+TGG | + | chr1.1:8308097-8308116 | MS.gene60302:CDS | 60.0% | |
| GTGAGAGGGGAGAATGGGGT+TGG | + | chr1.1:8308103-8308122 | MS.gene60302:CDS | 60.0% | |
| TTCCTAAACCGCGCAGCAGG+CGG | - | chr1.1:8307590-8307609 | None:intergenic | 60.0% | |
| ! | GAGGAGGCGAGTGCCTTTTC+AGG | + | chr1.1:8308396-8308415 | MS.gene60302:CDS | 60.0% |
| AAGTAGAGCCGCCTGCTGCG+CGG | + | chr1.1:8307579-8307598 | MS.gene60302:CDS | 65.0% | |
| AGCCGCCTGCTGCGCGGTTT+AGG | + | chr1.1:8307585-8307604 | MS.gene60302:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 8307035 | 8309265 | 8307035 | ID=MS.gene60302 |
| chr1.1 | mRNA | 8307035 | 8309265 | 8307035 | ID=MS.gene60302.t1;Parent=MS.gene60302 |
| chr1.1 | exon | 8307035 | 8309027 | 8307035 | ID=MS.gene60302.t1.exon1;Parent=MS.gene60302.t1 |
| chr1.1 | CDS | 8307035 | 8309027 | 8307035 | ID=cds.MS.gene60302.t1;Parent=MS.gene60302.t1 |
| chr1.1 | exon | 8309129 | 8309265 | 8309129 | ID=MS.gene60302.t1.exon2;Parent=MS.gene60302.t1 |
| chr1.1 | CDS | 8309129 | 8309265 | 8309129 | ID=cds.MS.gene60302.t1;Parent=MS.gene60302.t1 |
| Gene Sequence |
| Protein sequence |
