Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013090.t1 | XP_024635344.1 | 93.5 | 648 | 41 | 1 | 7 | 654 | 40 | 686 | 2.60E-271 | 944.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013090.t1 | Q8VYB7 | 53.0 | 651 | 286 | 11 | 7 | 653 | 40 | 674 | 6.4e-109 | 396.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013090.t1 | A0A396J0G0 | 93.5 | 648 | 41 | 1 | 7 | 654 | 40 | 686 | 1.9e-271 | 944.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013090 | MS.gene72652 | PPI |
| MS.gene013090 | MS.gene065113 | PPI |
| MS.gene013090 | MS.gene08800 | PPI |
| MS.gene013090 | MS.gene65326 | PPI |
| MS.gene013090 | MS.gene023504 | PPI |
| MS.gene09288 | MS.gene013090 | PPI |
| MS.gene86551 | MS.gene013090 | PPI |
| MS.gene013090 | MS.gene64882 | PPI |
| MS.gene013090 | MS.gene029385 | PPI |
| MS.gene013090 | MS.gene71852 | PPI |
| MS.gene013090 | MS.gene08956 | PPI |
| MS.gene013090 | MS.gene76283 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013090.t1 | MTR_3g100110 | 91.004 | 667 | 40 | 2 | 7 | 654 | 40 | 705 | 0.0 | 1240 |
| MS.gene013090.t1 | MTR_2g098650 | 27.568 | 185 | 118 | 4 | 8 | 191 | 62 | 231 | 5.81e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013090.t1 | AT4G24490 | 51.994 | 652 | 291 | 13 | 7 | 653 | 40 | 674 | 0.0 | 618 |
| MS.gene013090.t1 | AT4G24490 | 51.994 | 652 | 291 | 13 | 7 | 653 | 40 | 674 | 0.0 | 618 |
| MS.gene013090.t1 | AT5G41820 | 45.846 | 674 | 313 | 21 | 7 | 654 | 38 | 685 | 7.36e-167 | 494 |
| MS.gene013090.t1 | AT5G41820 | 45.846 | 674 | 313 | 21 | 7 | 654 | 38 | 685 | 7.36e-167 | 494 |
| MS.gene013090.t1 | AT3G59380 | 28.054 | 221 | 130 | 8 | 26 | 240 | 74 | 271 | 9.63e-15 | 76.3 |
Find 112 sgRNAs with CRISPR-Local
Find 244 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACACACTTCAAAAGTAATT+TGG | 0.107140 | 3.2:+83312978 | None:intergenic |
| TCTTCAAATGGATATCATTA+TGG | 0.162505 | 3.2:-83313010 | MS.gene013090:CDS |
| GCTCAAATCTAAAGCTTCTT+TGG | 0.257947 | 3.2:+83314940 | None:intergenic |
| GTTACAGTGCCACTAAGTTT+TGG | 0.276594 | 3.2:-83311010 | MS.gene013090:CDS |
| TTCCAAGCTGTGTAACATTC+TGG | 0.277030 | 3.2:+83314896 | None:intergenic |
| GTAGGTAGTTGTTTCCATTC+AGG | 0.286385 | 3.2:+83313311 | None:intergenic |
| GTACCTAAACATTGGAAATA+TGG | 0.301196 | 3.2:-83313095 | MS.gene013090:CDS |
| ACTCGAGTACTGCTCAAGTT+TGG | 0.306160 | 3.2:-83313123 | MS.gene013090:CDS |
| TGATTGAAATATAGAATTAC+TGG | 0.315763 | 3.2:+83313235 | None:intergenic |
| ATTACTCTGCGTGGCATAAT+AGG | 0.315834 | 3.2:-83314317 | MS.gene013090:CDS |
| GTGCATGGCATCATAGAAAA+TGG | 0.322690 | 3.2:-83314611 | MS.gene013090:CDS |
| TCTTGAAGGAAGATCTTGTT+TGG | 0.323319 | 3.2:-83313165 | MS.gene013090:CDS |
| CTTCAAATGGATATCATTAT+GGG | 0.330697 | 3.2:-83313009 | MS.gene013090:CDS |
| AATTGGAAGTTGTTGGAATA+TGG | 0.336661 | 3.2:+83312834 | None:intergenic |
| GCTCCATATTTCCAATGTTT+AGG | 0.346075 | 3.2:+83313092 | None:intergenic |
| AGATAATGAATTGCGCCTTC+TGG | 0.350273 | 3.2:-83314562 | MS.gene013090:CDS |
| AACAACTACCTACATGGTTC+TGG | 0.351693 | 3.2:-83313301 | MS.gene013090:CDS |
| CTCGAGTACTGCTCAAGTTT+GGG | 0.352805 | 3.2:-83313122 | MS.gene013090:CDS |
| CTCCTCTACTCGTTTCATCT+TGG | 0.355540 | 3.2:-83313357 | MS.gene013090:CDS |
| ACACACTTCAAAAGTAATTT+GGG | 0.361270 | 3.2:+83312979 | None:intergenic |
| TTCTTTATGGGAAAATCCTT+CGG | 0.370115 | 3.2:+83313495 | None:intergenic |
| CGTTACATCTCTCTTTGATC+AGG | 0.378564 | 3.2:-83314822 | MS.gene013090:CDS |
| TTGACCGATTTGAACATATC+AGG | 0.382807 | 3.2:-83310957 | MS.gene013090:CDS |
| TCTTTATAGTAGTGGCAATA+TGG | 0.395093 | 3.2:+83311723 | None:intergenic |
| TAGGTAGTTGTTTCCATTCA+GGG | 0.395863 | 3.2:+83313312 | None:intergenic |
| ATGCACCAATTGGAAGTTGT+TGG | 0.414123 | 3.2:+83312827 | None:intergenic |
| TTTCCACGTTGCCCGTCAAC+AGG | 0.415381 | 3.2:+83312935 | None:intergenic |
| AATCTATCATTGTCACGAAT+GGG | 0.417993 | 3.2:-83311657 | MS.gene013090:CDS |
| CTTTGATCAGGAGCTCAAAC+TGG | 0.426928 | 3.2:-83314810 | MS.gene013090:intron |
| AATTGCCTCCATGCACCAAT+TGG | 0.435270 | 3.2:+83312817 | None:intergenic |
| ATCCAGAATGTTACACAGCT+TGG | 0.438422 | 3.2:-83314898 | MS.gene013090:CDS |
| AAATACACAGAGAAAGTGAT+AGG | 0.439033 | 3.2:-83314354 | MS.gene013090:CDS |
| GATCACCGTTGGACATTCTA+CGG | 0.445219 | 3.2:-83313041 | MS.gene013090:CDS |
| AGATGTAACGGAATCGGAAT+CGG | 0.448382 | 3.2:+83314835 | None:intergenic |
| ATCTACTTTATCTAAAAGAA+AGG | 0.448700 | 3.2:-83313518 | MS.gene013090:CDS |
| CACATACTGAAGTATTTGCC+TGG | 0.450894 | 3.2:-83311058 | MS.gene013090:CDS |
| GAAAGCTTCCCAAAACTTAG+TGG | 0.451020 | 3.2:+83311001 | None:intergenic |
| GTTTCATCTTGGCCATCTCA+TGG | 0.462823 | 3.2:-83313346 | MS.gene013090:CDS |
| ATTTCCTGATATGTTCAAAT+CGG | 0.462845 | 3.2:+83310953 | None:intergenic |
| TGTTAAATCTGAACTCTTGA+AGG | 0.463405 | 3.2:-83313179 | MS.gene013090:CDS |
| AAGAAGAATTTCAAGTCCTA+TGG | 0.463824 | 3.2:-83314633 | MS.gene013090:CDS |
| AAAGAGAGATGTAACGGAAT+CGG | 0.469543 | 3.2:+83314829 | None:intergenic |
| AATATTTCTTGCAATGAGCT+AGG | 0.472390 | 3.2:-83311128 | MS.gene013090:CDS |
| TATTTCAATCAAGCAGTTGA+AGG | 0.472589 | 3.2:-83313223 | MS.gene013090:CDS |
| GTAATGCTTGAGAACTTCTT+CGG | 0.479471 | 3.2:+83312579 | None:intergenic |
| GGAGCTAATATAACCCTGAA+TGG | 0.479944 | 3.2:-83313325 | MS.gene013090:CDS |
| CTCGAGTTATTCGTAGAAAG+TGG | 0.480013 | 3.2:+83313139 | None:intergenic |
| AATGAACTTCGATCAATTGA+AGG | 0.480415 | 3.2:-83311588 | MS.gene013090:intron |
| ATATTCCAACAACTTCCAAT+TGG | 0.483856 | 3.2:-83312832 | MS.gene013090:CDS |
| AACGTGGAAAGTTGACTTCA+TGG | 0.490403 | 3.2:-83312922 | MS.gene013090:CDS |
| ATCGAAGTTCATTGTGGCTA+AGG | 0.491541 | 3.2:+83311598 | None:intergenic |
| AAATCTATCATTGTCACGAA+TGG | 0.496579 | 3.2:-83311658 | MS.gene013090:CDS |
| TTCAAGATTCGCTGTCAGAC+TGG | 0.504932 | 3.2:-83312775 | MS.gene013090:intron |
| TAGAAAATGGGTGCTTAGCA+AGG | 0.509907 | 3.2:-83314598 | MS.gene013090:CDS |
| AACGGTGATCTCTATAGAAT+AGG | 0.511032 | 3.2:+83313054 | None:intergenic |
| AATCTGAGTCATAATAAACT+TGG | 0.514137 | 3.2:-83311203 | MS.gene013090:CDS |
| CTGATGCGTCTTTATAGTAG+TGG | 0.518229 | 3.2:+83311715 | None:intergenic |
| AAGGATTTCAAAACGGTCCC+AGG | 0.521246 | 3.2:+83311040 | None:intergenic |
| TCTATGATGCCATGCACCAT+AGG | 0.521696 | 3.2:+83314617 | None:intergenic |
| ATTCAGATGATCAGAGTGGT+TGG | 0.527102 | 3.2:-83313423 | MS.gene013090:CDS |
| AATACTTCAGTATGTGCTAA+AGG | 0.531773 | 3.2:+83311065 | None:intergenic |
| CTCATACAGAACCTGTTGAC+GGG | 0.537445 | 3.2:-83312946 | MS.gene013090:CDS |
| TGGGTTGTGTACCTAAACAT+TGG | 0.542701 | 3.2:-83313103 | MS.gene013090:CDS |
| CTACAAGGATGAGCACAGTC+TGG | 0.544150 | 3.2:-83312518 | MS.gene013090:CDS |
| CAGTCTGGTATTACTTCGGC+AGG | 0.545028 | 3.2:-83312503 | MS.gene013090:intron |
| TCATTTAAGCACTTCAGAGT+AGG | 0.549730 | 3.2:+83310885 | None:intergenic |
| GTGCTAAAGGCGAAGAGCAT+AGG | 0.549796 | 3.2:+83311078 | None:intergenic |
| ATACTAGTTATGTGTGTCTA+CGG | 0.552144 | 3.2:-83311686 | MS.gene013090:CDS |
| TTACACCGAGCTGATGAAGT+TGG | 0.552946 | 3.2:-83312560 | MS.gene013090:CDS |
| TAAACAAGATAGAAGTTGCA+TGG | 0.554228 | 3.2:+83311226 | None:intergenic |
| AGAAAATGGGTGCTTAGCAA+GGG | 0.556032 | 3.2:-83314597 | MS.gene013090:CDS |
| AATGGAAACAACTACCTACA+TGG | 0.558777 | 3.2:-83313307 | MS.gene013090:CDS |
| AACAACTTCCAATTGGTGCA+TGG | 0.563161 | 3.2:-83312825 | MS.gene013090:CDS |
| GCTCATACAGAACCTGTTGA+CGG | 0.564601 | 3.2:-83312947 | MS.gene013090:CDS |
| TTCACGCTTGGAATTACCGA+AGG | 0.566706 | 3.2:-83314509 | MS.gene013090:intron |
| AATACACAGAGAAAGTGATA+GGG | 0.570425 | 3.2:-83314353 | MS.gene013090:CDS |
| TGCCACAAAGGATTTCAAAA+CGG | 0.571179 | 3.2:+83311033 | None:intergenic |
| GTTATATTAGCTCCATGAGA+TGG | 0.576501 | 3.2:+83313334 | None:intergenic |
| TGCATGGCATCATAGAAAAT+GGG | 0.578210 | 3.2:-83314610 | MS.gene013090:CDS |
| CTGATCAAAGAGAGATGTAA+CGG | 0.593921 | 3.2:+83314823 | None:intergenic |
| ATCACCGTTGGACATTCTAC+GGG | 0.595563 | 3.2:-83313040 | MS.gene013090:CDS |
| AGCACAGTCTGGTATTACTT+CGG | 0.602433 | 3.2:-83312507 | MS.gene013090:CDS |
| TGGATCCAACTTCATCAGCT+CGG | 0.609055 | 3.2:+83312555 | None:intergenic |
| GTATTTCAACTCATCCTCAT+CGG | 0.609479 | 3.2:+83314371 | None:intergenic |
| ACATACTGAAGTATTTGCCT+GGG | 0.609573 | 3.2:-83311057 | MS.gene013090:CDS |
| ATTTCAAGTCCTATGGTGCA+TGG | 0.610024 | 3.2:-83314626 | MS.gene013090:CDS |
| TTGAGAGAGATTGTGTTGAA+CGG | 0.611215 | 3.2:+83314859 | None:intergenic |
| ATCTATCATTGTCACGAATG+GGG | 0.611320 | 3.2:-83311656 | MS.gene013090:CDS |
| ACTTCAAAAGTAATTTGGGA+AGG | 0.614137 | 3.2:+83312983 | None:intergenic |
| CAATTGATCGAAGTTCATTG+TGG | 0.616533 | 3.2:+83311592 | None:intergenic |
| GAGACAAACCAGAACCATGT+AGG | 0.618326 | 3.2:+83313293 | None:intergenic |
| TGGAAAGTTGACTTCATGGA+AGG | 0.621972 | 3.2:-83312918 | MS.gene013090:CDS |
| ACTCTGCGTGGCATAATAGG+AGG | 0.623837 | 3.2:-83314314 | MS.gene013090:intron |
| AAGGCGCAATTCATTATCTG+TGG | 0.624582 | 3.2:+83314566 | None:intergenic |
| TTATCTAAAAGAAAGGCCGA+AGG | 0.627691 | 3.2:-83313511 | MS.gene013090:CDS |
| CCTTCTGAAAATCATCCAGA+AGG | 0.629146 | 3.2:+83314547 | None:intergenic |
| TATTCTATAGAGATCACCGT+TGG | 0.629388 | 3.2:-83313052 | MS.gene013090:CDS |
| AACACATTCTCTATACTACA+AGG | 0.631342 | 3.2:-83312533 | MS.gene013090:CDS |
| GGCCAAGATGAAACGAGTAG+AGG | 0.632437 | 3.2:+83313355 | None:intergenic |
| ATACACAGAGAAAGTGATAG+GGG | 0.641816 | 3.2:-83314352 | MS.gene013090:CDS |
| TTCAAATGGATATCATTATG+GGG | 0.641853 | 3.2:-83313008 | MS.gene013090:CDS |
| TTGTAGTATAGAGAATGTGT+TGG | 0.648966 | 3.2:+83312535 | None:intergenic |
| TGGCACTGTAACTGCCACAA+AGG | 0.650810 | 3.2:+83311021 | None:intergenic |
| ACTAATGAAAATATCCGATG+AGG | 0.652167 | 3.2:-83314385 | MS.gene013090:CDS |
| GAAAATGGGTGCTTAGCAAG+GGG | 0.654222 | 3.2:-83314596 | MS.gene013090:CDS |
| AACTTCCAATTGGTGCATGG+AGG | 0.682685 | 3.2:-83312822 | MS.gene013090:CDS |
| ACTGATTCAGATGATCAGAG+TGG | 0.689082 | 3.2:-83313427 | MS.gene013090:CDS |
| AATACCCGTAGAATGTCCAA+CGG | 0.701251 | 3.2:+83313036 | None:intergenic |
| GAACCTGTTGACGGGCAACG+TGG | 0.708889 | 3.2:-83312938 | MS.gene013090:CDS |
| ATGGTGATTAGTAGATACAG+CGG | 0.715834 | 3.2:+83312853 | None:intergenic |
| AGGTGTGAACTCATCTACAG+TGG | 0.750657 | 3.2:-83313203 | MS.gene013090:CDS |
| AGCGACTCTAGCGATCTGAG+AGG | 0.759932 | 3.2:+83311161 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAACAAATAAAATTATTTA+TGG | + | chr3.2:83314204-83314223 | None:intergenic | 10.0% |
| !!! | TTATTTTCGTTTTTATTTTT+TGG | - | chr3.2:83311002-83311021 | MS.gene013090:CDS | 10.0% |
| !!! | TTTATTTTTAATGAATTTTC+TGG | - | chr3.2:83313552-83313571 | MS.gene013090:intron | 10.0% |
| !!! | TTTGAAAAAAAATATTCTTT+TGG | - | chr3.2:83312055-83312074 | MS.gene013090:intron | 10.0% |
| !! | ACAAATAAAATTATTTATGG+TGG | + | chr3.2:83314201-83314220 | None:intergenic | 15.0% |
| !!! | AAAAAAATATTCTTTTGGTA+TGG | - | chr3.2:83312060-83312079 | MS.gene013090:intron | 15.0% |
| !!! | ATTTTTTCTTTTATCATGTT+GGG | + | chr3.2:83313390-83313409 | None:intergenic | 15.0% |
| !! | AATAAAAAAGCAAACAAAAG+TGG | + | chr3.2:83311923-83311942 | None:intergenic | 20.0% |
| !! | AATGAGAATATTGATGTTAA+TGG | - | chr3.2:83314600-83314619 | MS.gene013090:CDS | 20.0% |
| !! | AATTTAGCGTTATTATTACT+GGG | - | chr3.2:83314492-83314511 | MS.gene013090:intron | 20.0% |
| !! | ATAATAACGCTAAATTATAG+TGG | + | chr3.2:83314488-83314507 | None:intergenic | 20.0% |
| !! | ATCTACTTTATCTAAAAGAA+AGG | - | chr3.2:83312475-83312494 | MS.gene013090:intron | 20.0% |
| !! | GAAATATAACTGGAAAATAT+GGG | + | chr3.2:83313278-83313297 | None:intergenic | 20.0% |
| !! | TAATTTAGCGTTATTATTAC+TGG | - | chr3.2:83314491-83314510 | MS.gene013090:intron | 20.0% |
| !! | TGAAATATAACTGGAAAATA+TGG | + | chr3.2:83313279-83313298 | None:intergenic | 20.0% |
| !! | TGATTGAAATATAGAATTAC+TGG | + | chr3.2:83312761-83312780 | None:intergenic | 20.0% |
| !! | TTTACCAAAAAATTAGATGA+TGG | - | chr3.2:83313829-83313848 | MS.gene013090:intron | 20.0% |
| !!! | ACAAACATTGACATATATTT+TGG | - | chr3.2:83311955-83311974 | MS.gene013090:intron | 20.0% |
| !!! | ATAAAATTATTTATGGTGGA+AGG | + | chr3.2:83314197-83314216 | None:intergenic | 20.0% |
| !!! | CTTCAAAATGATCAATTTTT+CGG | + | chr3.2:83313111-83313130 | None:intergenic | 20.0% |
| !!! | GAGAATATTTTTGAGTTAAT+GGG | - | chr3.2:83313851-83313870 | MS.gene013090:intron | 20.0% |
| !!! | GATTTTTTCTTTTATCATGT+TGG | + | chr3.2:83313391-83313410 | None:intergenic | 20.0% |
| !!! | TCCTTTTCTTTTTATCAAAA+GGG | + | chr3.2:83311522-83311541 | None:intergenic | 20.0% |
| !!! | TTCCTTTTCTTTTTATCAAA+AGG | + | chr3.2:83311523-83311542 | None:intergenic | 20.0% |
| !!! | TTGCTTTTTTATTTATGTTC+TGG | - | chr3.2:83311930-83311949 | MS.gene013090:intron | 20.0% |
| !!! | TTGGTTATTTTGTATTGTTT+AGG | - | chr3.2:83311323-83311342 | MS.gene013090:intron | 20.0% |
| !!! | TTTTATTTGTTCATGTTATG+AGG | - | chr3.2:83314211-83314230 | MS.gene013090:intron | 20.0% |
| !!! | TTTTGGTTTTTGAATAAATC+TGG | - | chr3.2:83311019-83311038 | MS.gene013090:CDS | 20.0% |
| !!! | TTTTTTCTTTTATCATGTTG+GGG | + | chr3.2:83313389-83313408 | None:intergenic | 20.0% |
| !!! | TTTTTTTCAAATACCTAGAT+GGG | + | chr3.2:83312046-83312065 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCAAATACCTAGA+TGG | + | chr3.2:83312047-83312066 | None:intergenic | 20.0% |
| ! | AAGATAAGGAATGAAAGAAA+TGG | - | chr3.2:83313714-83313733 | MS.gene013090:intron | 25.0% |
| ! | AATCTGAGTCATAATAAACT+TGG | - | chr3.2:83314790-83314809 | MS.gene013090:intron | 25.0% |
| ! | ACACACTTCAAAAGTAATTT+GGG | + | chr3.2:83313017-83313036 | None:intergenic | 25.0% |
| ! | AGAAAAGTTTATGCTGAAAT+AGG | - | chr3.2:83313783-83313802 | MS.gene013090:intron | 25.0% |
| ! | AGGGATAAATATTTAACCTT+CGG | + | chr3.2:83311503-83311522 | None:intergenic | 25.0% |
| ! | ATTTAAAAGTTTAACCCTTC+TGG | - | chr3.2:83312164-83312183 | MS.gene013090:intron | 25.0% |
| ! | ATTTCCTGATATGTTCAAAT+CGG | + | chr3.2:83315043-83315062 | None:intergenic | 25.0% |
| ! | CAATATTCTCATTAAAGCTT+GGG | + | chr3.2:83314593-83314612 | None:intergenic | 25.0% |
| ! | CTAAGTCAAAGAATAAGATA+AGG | - | chr3.2:83313700-83313719 | MS.gene013090:intron | 25.0% |
| ! | CTGAAAAATTATCAATGGAA+TGG | + | chr3.2:83312446-83312465 | None:intergenic | 25.0% |
| ! | CTTCAAATGGATATCATTAT+GGG | - | chr3.2:83312984-83313003 | MS.gene013090:CDS | 25.0% |
| ! | GAAAAAATGTGTTAACAAGT+TGG | - | chr3.2:83313668-83313687 | MS.gene013090:intron | 25.0% |
| ! | GCATCAAATTGAAATATAAC+TGG | + | chr3.2:83313288-83313307 | None:intergenic | 25.0% |
| ! | TACAAAAATCAAACAAAGCA+CGG | + | chr3.2:83313310-83313329 | None:intergenic | 25.0% |
| ! | TCAATATTCTCATTAAAGCT+TGG | + | chr3.2:83314594-83314613 | None:intergenic | 25.0% |
| ! | TCTTCAAATGGATATCATTA+TGG | - | chr3.2:83312983-83313002 | MS.gene013090:CDS | 25.0% |
| ! | TGGTATGGTTAATAATCAAT+TGG | - | chr3.2:83312075-83312094 | MS.gene013090:intron | 25.0% |
| ! | TTCAAATGGATATCATTATG+GGG | - | chr3.2:83312985-83313004 | MS.gene013090:CDS | 25.0% |
| !! | AAACTTTTAAATGCAAGCAA+CGG | + | chr3.2:83312156-83312175 | None:intergenic | 25.0% |
| !! | CTATAAAAGCATAGTACATA+TGG | + | chr3.2:83312305-83312324 | None:intergenic | 25.0% |
| !! | GATTTTCTGTGATTTAAATC+TGG | - | chr3.2:83313594-83313613 | MS.gene013090:intron | 25.0% |
| !! | TCCCTTTTGATAAAAAGAAA+AGG | - | chr3.2:83311518-83311537 | MS.gene013090:intron | 25.0% |
| !! | TCTCAAAGAATGTAATTTGT+TGG | + | chr3.2:83312376-83312395 | None:intergenic | 25.0% |
| !! | TTGCAAAACCTTTTCTTTAT+GGG | + | chr3.2:83312513-83312532 | None:intergenic | 25.0% |
| !!! | CATATATTTTGGATATGTAC+TGG | - | chr3.2:83311966-83311985 | MS.gene013090:intron | 25.0% |
| !!! | CTTTGAGATTTTGTTTAATG+TGG | - | chr3.2:83312388-83312407 | MS.gene013090:intron | 25.0% |
| !!! | GGAGAATATTTTTGAGTTAA+TGG | - | chr3.2:83313850-83313869 | MS.gene013090:intron | 25.0% |
| !!! | GTTATTTTGTATTGTTTAGG+TGG | - | chr3.2:83311326-83311345 | MS.gene013090:intron | 25.0% |
| !!! | TTCTCCATCATCTAATTTTT+TGG | + | chr3.2:83313836-83313855 | None:intergenic | 25.0% |
| AAAGGAATTTGCAATTTGAG+AGG | - | chr3.2:83311536-83311555 | MS.gene013090:intron | 30.0% | |
| AAATACACAGAGAAAGTGAT+AGG | - | chr3.2:83311639-83311658 | MS.gene013090:CDS | 30.0% | |
| AAATCTATCATTGTCACGAA+TGG | - | chr3.2:83314335-83314354 | MS.gene013090:CDS | 30.0% | |
| AAATTATAGTGGTGTTTGAG+TGG | + | chr3.2:83314477-83314496 | None:intergenic | 30.0% | |
| AACACATTCTCTATACTACA+AGG | - | chr3.2:83313460-83313479 | MS.gene013090:CDS | 30.0% | |
| AATACACAGAGAAAGTGATA+GGG | - | chr3.2:83311640-83311659 | MS.gene013090:CDS | 30.0% | |
| AATACTTCAGTATGTGCTAA+AGG | + | chr3.2:83314931-83314950 | None:intergenic | 30.0% | |
| AATCTATCATTGTCACGAAT+GGG | - | chr3.2:83314336-83314355 | MS.gene013090:CDS | 30.0% | |
| AATGAACTTCGATCAATTGA+AGG | - | chr3.2:83314405-83314424 | MS.gene013090:intron | 30.0% | |
| AATTGGAAGTTGTTGGAATA+TGG | + | chr3.2:83313162-83313181 | None:intergenic | 30.0% | |
| ACCTAGATGAGATTGTTTAT+GGG | + | chr3.2:83312130-83312149 | None:intergenic | 30.0% | |
| ACTAATGAAAATATCCGATG+AGG | - | chr3.2:83311608-83311627 | MS.gene013090:CDS | 30.0% | |
| ACTTCAAAAGTAATTTGGGA+AGG | + | chr3.2:83313013-83313032 | None:intergenic | 30.0% | |
| ATACTAGTTATGTGTGTCTA+CGG | - | chr3.2:83314307-83314326 | MS.gene013090:intron | 30.0% | |
| ATATGGGAAAAGAACTTACT+AGG | + | chr3.2:83313262-83313281 | None:intergenic | 30.0% | |
| ATATTCCAACAACTTCCAAT+TGG | - | chr3.2:83313161-83313180 | MS.gene013090:CDS | 30.0% | |
| ATCATGATCATTCAAGATCT+TGG | + | chr3.2:83312195-83312214 | None:intergenic | 30.0% | |
| CAATGACATAGAACATTGTT+CGG | + | chr3.2:83311285-83311304 | None:intergenic | 30.0% | |
| CACACACTTCAAAAGTAATT+TGG | + | chr3.2:83313018-83313037 | None:intergenic | 30.0% | |
| CTAAAATTGCCAAAAGTGAT+AGG | + | chr3.2:83314681-83314700 | None:intergenic | 30.0% | |
| CTGGTTATGAGAAAAAAAAG+TGG | - | chr3.2:83313998-83314017 | MS.gene013090:intron | 30.0% | |
| GTACCTAAACATTGGAAATA+TGG | - | chr3.2:83312898-83312917 | MS.gene013090:CDS | 30.0% | |
| TAAACAAGATAGAAGTTGCA+TGG | + | chr3.2:83314770-83314789 | None:intergenic | 30.0% | |
| TACCTAGATGAGATTGTTTA+TGG | + | chr3.2:83312131-83312150 | None:intergenic | 30.0% | |
| TATTTATGCGTGATAAGTTG+TGG | - | chr3.2:83311989-83312008 | MS.gene013090:intron | 30.0% | |
| TATTTCAATCAAGCAGTTGA+AGG | - | chr3.2:83312770-83312789 | MS.gene013090:intron | 30.0% | |
| TCTGGATATGAGAAAAAATG+TGG | - | chr3.2:83313612-83313631 | MS.gene013090:intron | 30.0% | |
| TCTTTATAGTAGTGGCAATA+TGG | + | chr3.2:83314273-83314292 | None:intergenic | 30.0% | |
| TGTTAAATCTGAACTCTTGA+AGG | - | chr3.2:83312814-83312833 | MS.gene013090:CDS | 30.0% | |
| TTCTATGTCATTGCAAAATG+TGG | - | chr3.2:83311292-83311311 | MS.gene013090:intron | 30.0% | |
| TTCTTTATGGGAAAATCCTT+CGG | + | chr3.2:83312501-83312520 | None:intergenic | 30.0% | |
| TTGTAGTATAGAGAATGTGT+TGG | + | chr3.2:83313461-83313480 | None:intergenic | 30.0% | |
| ! | AAGAAGAATTTCAAGTCCTA+TGG | - | chr3.2:83311360-83311379 | MS.gene013090:intron | 30.0% |
| ! | ACGGGTATTTTATCTTCAAA+TGG | - | chr3.2:83312971-83312990 | MS.gene013090:CDS | 30.0% |
| ! | AGGATTTTCCCATAAAGAAA+AGG | - | chr3.2:83312502-83312521 | MS.gene013090:intron | 30.0% |
| ! | CTTGCAAAACCTTTTCTTTA+TGG | + | chr3.2:83312514-83312533 | None:intergenic | 30.0% |
| ! | TAAAGAAAAGGTTTTGCAAG+AGG | - | chr3.2:83312514-83312533 | MS.gene013090:CDS | 30.0% |
| ! | TATCATTGCTTCTAAGAAGT+TGG | - | chr3.2:83314705-83314724 | MS.gene013090:intron | 30.0% |
| !! | ATTTTAGTAATTACTCTGCG+TGG | - | chr3.2:83311667-83311686 | MS.gene013090:CDS | 30.0% |
| !! | GTCTTTTGAGAATTTACTGT+GGG | - | chr3.2:83314359-83314378 | MS.gene013090:CDS | 30.0% |
| !! | TAGAGGAGAATCATTTTTCA+CGG | + | chr3.2:83312624-83312643 | None:intergenic | 30.0% |
| !!! | TGACACTGAATTTTTTGACA+GGG | - | chr3.2:83314737-83314756 | MS.gene013090:intron | 30.0% |
| AACGGTGATCTCTATAGAAT+AGG | + | chr3.2:83312942-83312961 | None:intergenic | 35.0% | |
| AATGGAAACAACTACCTACA+TGG | - | chr3.2:83312686-83312705 | MS.gene013090:intron | 35.0% | |
| ATACACAGAGAAAGTGATAG+GGG | - | chr3.2:83311641-83311660 | MS.gene013090:CDS | 35.0% | |
| ATCTATCATTGTCACGAATG+GGG | - | chr3.2:83314337-83314356 | MS.gene013090:CDS | 35.0% | |
| ATGGTGATTAGTAGATACAG+CGG | + | chr3.2:83313143-83313162 | None:intergenic | 35.0% | |
| CAATTGATCGAAGTTCATTG+TGG | + | chr3.2:83314404-83314423 | None:intergenic | 35.0% | |
| CTGATAATTTACTCCTTCTG+TGG | - | chr3.2:83313968-83313987 | MS.gene013090:intron | 35.0% | |
| CTGATCAAAGAGAGATGTAA+CGG | + | chr3.2:83311173-83311192 | None:intergenic | 35.0% | |
| GCAAAATGTGGAATTGTGAT+TGG | - | chr3.2:83311304-83311323 | MS.gene013090:intron | 35.0% | |
| GCACGCTGAAAAATTATCAA+TGG | + | chr3.2:83312451-83312470 | None:intergenic | 35.0% | |
| GCTCCATATTTCCAATGTTT+AGG | + | chr3.2:83312904-83312923 | None:intergenic | 35.0% | |
| GTAATGCTTGAGAACTTCTT+CGG | + | chr3.2:83313417-83313436 | None:intergenic | 35.0% | |
| GTATTTCAACTCATCCTCAT+CGG | + | chr3.2:83311625-83311644 | None:intergenic | 35.0% | |
| GTTATATTAGCTCCATGAGA+TGG | + | chr3.2:83312662-83312681 | None:intergenic | 35.0% | |
| TATTCTATAGAGATCACCGT+TGG | - | chr3.2:83312941-83312960 | MS.gene013090:CDS | 35.0% | |
| TCAATCTGAGAATTCAAGCT+CGG | + | chr3.2:83314049-83314068 | None:intergenic | 35.0% | |
| TCAGCAGATCATTATAGTGA+TGG | - | chr3.2:83311722-83311741 | MS.gene013090:CDS | 35.0% | |
| TCATTTAAGCACTTCAGAGT+AGG | + | chr3.2:83315111-83315130 | None:intergenic | 35.0% | |
| TCCCATAAACAATCTCATCT+AGG | - | chr3.2:83312126-83312145 | MS.gene013090:intron | 35.0% | |
| TCTTGAAGGAAGATCTTGTT+TGG | - | chr3.2:83312828-83312847 | MS.gene013090:CDS | 35.0% | |
| TGCATGGCATCATAGAAAAT+GGG | - | chr3.2:83311383-83311402 | MS.gene013090:intron | 35.0% | |
| TGCCACAAAGGATTTCAAAA+CGG | + | chr3.2:83314963-83314982 | None:intergenic | 35.0% | |
| TTATCTAAAAGAAAGGCCGA+AGG | - | chr3.2:83312482-83312501 | MS.gene013090:intron | 35.0% | |
| TTGAGAGAGATTGTGTTGAA+CGG | + | chr3.2:83311137-83311156 | None:intergenic | 35.0% | |
| ! | AAAGAACGTACATGCGATTT+TGG | + | chr3.2:83310942-83310961 | None:intergenic | 35.0% |
| ! | AAAGAGAGATGTAACGGAAT+CGG | + | chr3.2:83311167-83311186 | None:intergenic | 35.0% |
| ! | ACATACTGAAGTATTTGCCT+GGG | - | chr3.2:83314936-83314955 | MS.gene013090:CDS | 35.0% |
| ! | GCTCAAATCTAAAGCTTCTT+TGG | + | chr3.2:83311056-83311075 | None:intergenic | 35.0% |
| ! | TAGGTAGTTGTTTCCATTCA+GGG | + | chr3.2:83312684-83312703 | None:intergenic | 35.0% |
| !! | AATCTTCTAGAATGCTCCAA+AGG | + | chr3.2:83312107-83312126 | None:intergenic | 35.0% |
| !! | ACTTGGTAGTTTTACTGCTT+TGG | - | chr3.2:83314807-83314826 | MS.gene013090:intron | 35.0% |
| !! | CTTGGTAGTTTTACTGCTTT+GGG | - | chr3.2:83314808-83314827 | MS.gene013090:intron | 35.0% |
| !! | GGTCTTTTGAGAATTTACTG+TGG | - | chr3.2:83314358-83314377 | MS.gene013090:CDS | 35.0% |
| !! | TTACAGTGCCACTAAGTTTT+GGG | - | chr3.2:83314984-83315003 | MS.gene013090:intron | 35.0% |
| !! | TTGACCGATTTGAACATATC+AGG | - | chr3.2:83315036-83315055 | MS.gene013090:intron | 35.0% |
| !! | TTGGTAGTTTTACTGCTTTG+GGG | - | chr3.2:83314809-83314828 | MS.gene013090:intron | 35.0% |
| !!! | ACTGAATTTTTTGACAGGGT+TGG | - | chr3.2:83314741-83314760 | MS.gene013090:intron | 35.0% |
| !!! | CATTTTTTCAAGCACAGAGT+TGG | + | chr3.2:83313657-83313676 | None:intergenic | 35.0% |
| !!! | CTGACACTGAATTTTTTGAC+AGG | - | chr3.2:83314736-83314755 | MS.gene013090:intron | 35.0% |
| !!! | GTGGTTGGTTTTATCATCTT+TGG | - | chr3.2:83312585-83312604 | MS.gene013090:CDS | 35.0% |
| AAAGAACTTACTAGGTGGCA+TGG | + | chr3.2:83313254-83313273 | None:intergenic | 40.0% | |
| AAAGCATAGTACATATGGCC+TGG | + | chr3.2:83312300-83312319 | None:intergenic | 40.0% | |
| AACAACTACCTACATGGTTC+TGG | - | chr3.2:83312692-83312711 | MS.gene013090:intron | 40.0% | |
| AACAACTTCCAATTGGTGCA+TGG | - | chr3.2:83313168-83313187 | MS.gene013090:CDS | 40.0% | |
| AACCAGAAGAAAACCACAGA+AGG | + | chr3.2:83313984-83314003 | None:intergenic | 40.0% | |
| AAGGCGCAATTCATTATCTG+TGG | + | chr3.2:83311430-83311449 | None:intergenic | 40.0% | |
| AATACCCGTAGAATGTCCAA+CGG | + | chr3.2:83312960-83312979 | None:intergenic | 40.0% | |
| AATCAATTGGCTGCTACCTT+TGG | - | chr3.2:83312088-83312107 | MS.gene013090:intron | 40.0% | |
| AGAAAATGGGTGCTTAGCAA+GGG | - | chr3.2:83311396-83311415 | MS.gene013090:intron | 40.0% | |
| AGAGATGTTTCAACAGTGCA+AGG | - | chr3.2:83312241-83312260 | MS.gene013090:intron | 40.0% | |
| AGATAATGAATTGCGCCTTC+TGG | - | chr3.2:83311431-83311450 | MS.gene013090:intron | 40.0% | |
| AGCACAGTCTGGTATTACTT+CGG | - | chr3.2:83313486-83313505 | MS.gene013090:CDS | 40.0% | |
| AGCGTTATTATTACTGGGTG+TGG | - | chr3.2:83314497-83314516 | MS.gene013090:intron | 40.0% | |
| ATCCAGAATGTTACACAGCT+TGG | - | chr3.2:83311095-83311114 | MS.gene013090:CDS | 40.0% | |
| ATCGAAGTTCATTGTGGCTA+AGG | + | chr3.2:83314398-83314417 | None:intergenic | 40.0% | |
| ATGCACCAATTGGAAGTTGT+TGG | + | chr3.2:83313169-83313188 | None:intergenic | 40.0% | |
| ATTACTCTGCGTGGCATAAT+AGG | - | chr3.2:83311676-83311695 | MS.gene013090:CDS | 40.0% | |
| ATTCAGATGATCAGAGTGGT+TGG | - | chr3.2:83312570-83312589 | MS.gene013090:CDS | 40.0% | |
| CAACAGTGCAAGGAAGTTTA+TGG | - | chr3.2:83312251-83312270 | MS.gene013090:intron | 40.0% | |
| CAATTCTACAATTGTGCGCA+GGG | + | chr3.2:83313901-83313920 | None:intergenic | 40.0% | |
| CGTTACATCTCTCTTTGATC+AGG | - | chr3.2:83311171-83311190 | MS.gene013090:CDS | 40.0% | |
| CTCGAGTTATTCGTAGAAAG+TGG | + | chr3.2:83312857-83312876 | None:intergenic | 40.0% | |
| CTGATGCGTCTTTATAGTAG+TGG | + | chr3.2:83314281-83314300 | None:intergenic | 40.0% | |
| GAAAGCTTCCCAAAACTTAG+TGG | + | chr3.2:83314995-83315014 | None:intergenic | 40.0% | |
| GGAGCTAATATAACCCTGAA+TGG | - | chr3.2:83312668-83312687 | MS.gene013090:intron | 40.0% | |
| GTGCATGGCATCATAGAAAA+TGG | - | chr3.2:83311382-83311401 | MS.gene013090:intron | 40.0% | |
| TAAGTTGTGGACAACAACAG+TGG | - | chr3.2:83312002-83312021 | MS.gene013090:intron | 40.0% | |
| TAGAAAATGGGTGCTTAGCA+AGG | - | chr3.2:83311395-83311414 | MS.gene013090:intron | 40.0% | |
| TATAGTGGTGTTTGAGTGGA+GGG | + | chr3.2:83314473-83314492 | None:intergenic | 40.0% | |
| TCAAATACCTAGATGGGTGT+AGG | + | chr3.2:83312040-83312059 | None:intergenic | 40.0% | |
| TGGCTGTCTGAATTTCTGAT+GGG | - | chr3.2:83313919-83313938 | MS.gene013090:intron | 40.0% | |
| TGGGAAAAGAACTTACTAGG+TGG | + | chr3.2:83313259-83313278 | None:intergenic | 40.0% | |
| TGGGTTGTGTACCTAAACAT+TGG | - | chr3.2:83312890-83312909 | MS.gene013090:CDS | 40.0% | |
| TTATAGTGGTGTTTGAGTGG+AGG | + | chr3.2:83314474-83314493 | None:intergenic | 40.0% | |
| TTCCAAGCTGTGTAACATTC+TGG | + | chr3.2:83311100-83311119 | None:intergenic | 40.0% | |
| TTGGCTGTCTGAATTTCTGA+TGG | - | chr3.2:83313918-83313937 | MS.gene013090:intron | 40.0% | |
| ! | AACGTGGAAAGTTGACTTCA+TGG | - | chr3.2:83313071-83313090 | MS.gene013090:CDS | 40.0% |
| ! | ACTGATTCAGATGATCAGAG+TGG | - | chr3.2:83312566-83312585 | MS.gene013090:CDS | 40.0% |
| ! | AGATGTAACGGAATCGGAAT+CGG | + | chr3.2:83311161-83311180 | None:intergenic | 40.0% |
| ! | ATTTCAAGTCCTATGGTGCA+TGG | - | chr3.2:83311367-83311386 | MS.gene013090:intron | 40.0% |
| ! | ATTTTCAGAAGGCTGATGCA+CGG | - | chr3.2:83311457-83311476 | MS.gene013090:intron | 40.0% |
| ! | CACATACTGAAGTATTTGCC+TGG | - | chr3.2:83314935-83314954 | MS.gene013090:CDS | 40.0% |
| ! | CCTTCTGAAAATCATCCAGA+AGG | + | chr3.2:83311449-83311468 | None:intergenic | 40.0% |
| ! | CCTTCTGGATGATTTTCAGA+AGG | - | chr3.2:83311446-83311465 | MS.gene013090:intron | 40.0% |
| ! | GCTTCTAAGAAGTTGGAAGA+GGG | - | chr3.2:83314712-83314731 | MS.gene013090:intron | 40.0% |
| ! | GTAGGTAGTTGTTTCCATTC+AGG | + | chr3.2:83312685-83312704 | None:intergenic | 40.0% |
| ! | TCCACGTTTCCTATCACTTT+TGG | - | chr3.2:83314669-83314688 | MS.gene013090:intron | 40.0% |
| ! | TGCTTCTAAGAAGTTGGAAG+AGG | - | chr3.2:83314711-83314730 | MS.gene013090:intron | 40.0% |
| ! | TGGAAAGTTGACTTCATGGA+AGG | - | chr3.2:83313075-83313094 | MS.gene013090:CDS | 40.0% |
| !! | AAGCTTGGGTTAGCAAAAAG+TGG | + | chr3.2:83314579-83314598 | None:intergenic | 40.0% |
| !! | GTACATGCGATTTTGGTGAT+TGG | + | chr3.2:83310935-83310954 | None:intergenic | 40.0% |
| !! | GTTACAGTGCCACTAAGTTT+TGG | - | chr3.2:83314983-83315002 | MS.gene013090:intron | 40.0% |
| !!! | GAATTTTTTGACAGGGTTGG+AGG | - | chr3.2:83314744-83314763 | MS.gene013090:intron | 40.0% |
| !!! | GACCGTTTTGAAATCCTTTG+TGG | - | chr3.2:83314958-83314977 | MS.gene013090:intron | 40.0% |
| AACTTCCAATTGGTGCATGG+AGG | - | chr3.2:83313171-83313190 | MS.gene013090:CDS | 45.0% | |
| AAGGATTTCAAAACGGTCCC+AGG | + | chr3.2:83314956-83314975 | None:intergenic | 45.0% | |
| AATTGCCTCCATGCACCAAT+TGG | + | chr3.2:83313179-83313198 | None:intergenic | 45.0% | |
| AGGTGTGAACTCATCTACAG+TGG | - | chr3.2:83312790-83312809 | MS.gene013090:CDS | 45.0% | |
| ATCACCGTTGGACATTCTAC+GGG | - | chr3.2:83312953-83312972 | MS.gene013090:CDS | 45.0% | |
| CCAATTCTACAATTGTGCGC+AGG | + | chr3.2:83313902-83313921 | None:intergenic | 45.0% | |
| CCTGCGCACAATTGTAGAAT+TGG | - | chr3.2:83313899-83313918 | MS.gene013090:intron | 45.0% | |
| CTCATACAGAACCTGTTGAC+GGG | - | chr3.2:83313047-83313066 | MS.gene013090:CDS | 45.0% | |
| CTCCTCTACTCGTTTCATCT+TGG | - | chr3.2:83312636-83312655 | MS.gene013090:CDS | 45.0% | |
| CTTTGATCAGGAGCTCAAAC+TGG | - | chr3.2:83311183-83311202 | MS.gene013090:CDS | 45.0% | |
| GAAAATGGGTGCTTAGCAAG+GGG | - | chr3.2:83311397-83311416 | MS.gene013090:intron | 45.0% | |
| GAGACAAACCAGAACCATGT+AGG | + | chr3.2:83312703-83312722 | None:intergenic | 45.0% | |
| GATCACCGTTGGACATTCTA+CGG | - | chr3.2:83312952-83312971 | MS.gene013090:CDS | 45.0% | |
| GCCAAAAGTGATAGGAAACG+TGG | + | chr3.2:83314673-83314692 | None:intergenic | 45.0% | |
| GCTCATACAGAACCTGTTGA+CGG | - | chr3.2:83313046-83313065 | MS.gene013090:CDS | 45.0% | |
| GTCATGTGTGTACTACATCC+AGG | - | chr3.2:83312279-83312298 | MS.gene013090:intron | 45.0% | |
| GTGCGCAGGGCATAAATTAT+AGG | + | chr3.2:83313888-83313907 | None:intergenic | 45.0% | |
| GTTTCATCTTGGCCATCTCA+TGG | - | chr3.2:83312647-83312666 | MS.gene013090:CDS | 45.0% | |
| TCTATGATGCCATGCACCAT+AGG | + | chr3.2:83311379-83311398 | None:intergenic | 45.0% | |
| TGGATCCAACTTCATCAGCT+CGG | + | chr3.2:83313441-83313460 | None:intergenic | 45.0% | |
| TTACACCGAGCTGATGAAGT+TGG | - | chr3.2:83313433-83313452 | MS.gene013090:CDS | 45.0% | |
| TTATCAGTCGTGCATGTACG+AGG | + | chr3.2:83313955-83313974 | None:intergenic | 45.0% | |
| TTCAAGATTCGCTGTCAGAC+TGG | - | chr3.2:83313218-83313237 | MS.gene013090:CDS | 45.0% | |
| TTCACGCTTGGAATTACCGA+AGG | - | chr3.2:83311484-83311503 | MS.gene013090:intron | 45.0% | |
| ! | ACTCGAGTACTGCTCAAGTT+TGG | - | chr3.2:83312870-83312889 | MS.gene013090:CDS | 45.0% |
| ! | ATGCACGGAATTTTCACGCT+TGG | - | chr3.2:83311472-83311491 | MS.gene013090:intron | 45.0% |
| ! | CTCCTTCTGTGGTTTTCTTC+TGG | - | chr3.2:83313979-83313998 | MS.gene013090:intron | 45.0% |
| ! | CTCGAGTACTGCTCAAGTTT+GGG | - | chr3.2:83312871-83312890 | MS.gene013090:CDS | 45.0% |
| !! | AAGATCTTGGAAGCACCAGA+AGG | + | chr3.2:83312182-83312201 | None:intergenic | 45.0% |
| !! | AGATCTTGGAAGCACCAGAA+GGG | + | chr3.2:83312181-83312200 | None:intergenic | 45.0% |
| !! | TGAGTTAATGGGCTGTGACA+GGG | - | chr3.2:83313862-83313881 | MS.gene013090:intron | 45.0% |
| !! | TTGAGTTAATGGGCTGTGAC+AGG | - | chr3.2:83313861-83313880 | MS.gene013090:intron | 45.0% |
| ACTCTGCGTGGCATAATAGG+AGG | - | chr3.2:83311679-83311698 | MS.gene013090:CDS | 50.0% | |
| CAGTCTGGTATTACTTCGGC+AGG | - | chr3.2:83313490-83313509 | MS.gene013090:CDS | 50.0% | |
| CTACAAGGATGAGCACAGTC+TGG | - | chr3.2:83313475-83313494 | MS.gene013090:CDS | 50.0% | |
| GACAGCAGGATCAAGCACAA+TGG | + | chr3.2:83314545-83314564 | None:intergenic | 50.0% | |
| GATTCGCTGTCAGACTGGTA+TGG | - | chr3.2:83313223-83313242 | MS.gene013090:CDS | 50.0% | |
| GGCCAAGATGAAACGAGTAG+AGG | + | chr3.2:83312641-83312660 | None:intergenic | 50.0% | |
| GGTGTTTGAGTGGAGGGAAA+AGG | + | chr3.2:83314467-83314486 | None:intergenic | 50.0% | |
| TGGATAACTTGAGCGACAGC+AGG | + | chr3.2:83314559-83314578 | None:intergenic | 50.0% | |
| TGGCACTGTAACTGCCACAA+AGG | + | chr3.2:83314975-83314994 | None:intergenic | 50.0% | |
| TTGCATGCCTACACCCATCT+AGG | - | chr3.2:83312030-83312049 | MS.gene013090:intron | 50.0% | |
| ! | GTGCTAAAGGCGAAGAGCAT+AGG | + | chr3.2:83314918-83314937 | None:intergenic | 50.0% |
| !! | TGCGATTTTGGTGATTGGCG+AGG | + | chr3.2:83310930-83310949 | None:intergenic | 50.0% |
| AGCGACTCTAGCGATCTGAG+AGG | + | chr3.2:83314835-83314854 | None:intergenic | 55.0% | |
| TCGCTGTCAGACTGGTATGG+TGG | - | chr3.2:83313226-83313245 | MS.gene013090:CDS | 55.0% | |
| TTTCCACGTTGCCCGTCAAC+AGG | + | chr3.2:83313061-83313080 | None:intergenic | 55.0% | |
| ! | GAACCTGTTGACGGGCAACG+TGG | - | chr3.2:83313055-83313074 | MS.gene013090:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 83310872 | 83315143 | 83310872 | ID=MS.gene013090 |
| chr3.2 | mRNA | 83310872 | 83315143 | 83310872 | ID=MS.gene013090.t1;Parent=MS.gene013090 |
| chr3.2 | exon | 83315127 | 83315143 | 83315127 | ID=MS.gene013090.t1.exon1;Parent=MS.gene013090.t1 |
| chr3.2 | CDS | 83315127 | 83315143 | 83315127 | ID=cds.MS.gene013090.t1;Parent=MS.gene013090.t1 |
| chr3.2 | exon | 83314811 | 83314967 | 83314811 | ID=MS.gene013090.t1.exon2;Parent=MS.gene013090.t1 |
| chr3.2 | CDS | 83314811 | 83314967 | 83314811 | ID=cds.MS.gene013090.t1;Parent=MS.gene013090.t1 |
| chr3.2 | exon | 83314510 | 83314670 | 83314510 | ID=MS.gene013090.t1.exon3;Parent=MS.gene013090.t1 |
| chr3.2 | CDS | 83314510 | 83314670 | 83314510 | ID=cds.MS.gene013090.t1;Parent=MS.gene013090.t1 |
| chr3.2 | exon | 83314315 | 83314419 | 83314315 | ID=MS.gene013090.t1.exon4;Parent=MS.gene013090.t1 |
| chr3.2 | CDS | 83314315 | 83314419 | 83314315 | ID=cds.MS.gene013090.t1;Parent=MS.gene013090.t1 |
| chr3.2 | exon | 83312776 | 83313549 | 83312776 | ID=MS.gene013090.t1.exon5;Parent=MS.gene013090.t1 |
| chr3.2 | CDS | 83312776 | 83313549 | 83312776 | ID=cds.MS.gene013090.t1;Parent=MS.gene013090.t1 |
| chr3.2 | exon | 83312504 | 83312684 | 83312504 | ID=MS.gene013090.t1.exon6;Parent=MS.gene013090.t1 |
| chr3.2 | CDS | 83312504 | 83312684 | 83312504 | ID=cds.MS.gene013090.t1;Parent=MS.gene013090.t1 |
| chr3.2 | exon | 83311589 | 83311772 | 83311589 | ID=MS.gene013090.t1.exon7;Parent=MS.gene013090.t1 |
| chr3.2 | CDS | 83311589 | 83311772 | 83311589 | ID=cds.MS.gene013090.t1;Parent=MS.gene013090.t1 |
| chr3.2 | exon | 83310872 | 83311257 | 83310872 | ID=MS.gene013090.t1.exon8;Parent=MS.gene013090.t1 |
| chr3.2 | CDS | 83310872 | 83311257 | 83310872 | ID=cds.MS.gene013090.t1;Parent=MS.gene013090.t1 |
| Gene Sequence |
| Protein sequence |
