Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76283.t1 | XP_024627616.1 | 100 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 4.20E-86 | 328.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76283.t1 | Q84J75 | 81.2 | 313 | 59 | 0 | 1 | 313 | 9 | 321 | 1.8e-69 | 264.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76283.t1 | A0A072VR22 | 100.0 | 313 | 0 | 0 | 1 | 313 | 1 | 313 | 3.1e-86 | 328.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76283 | MS.gene065113 | PPI |
| MS.gene76283 | MS.gene08800 | PPI |
| MS.gene029385 | MS.gene76283 | PPI |
| MS.gene76283 | MS.gene029385 | PPI |
| MS.gene76283 | MS.gene020444 | PPI |
| MS.gene76283 | MS.gene023504 | PPI |
| MS.gene09288 | MS.gene76283 | PPI |
| MS.gene76283 | MS.gene71852 | PPI |
| MS.gene013090 | MS.gene76283 | PPI |
| MS.gene76283 | MS.gene08956 | PPI |
| MS.gene37916 | MS.gene76283 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76283.t1 | MTR_1g111160 | 99.681 | 313 | 1 | 0 | 1 | 313 | 1 | 313 | 0.0 | 639 |
| MS.gene76283.t1 | MTR_1g111160 | 97.924 | 289 | 6 | 0 | 1 | 289 | 1 | 289 | 0.0 | 577 |
| MS.gene76283.t1 | MTR_1g111160 | 99.611 | 257 | 1 | 0 | 1 | 257 | 1 | 257 | 0.0 | 524 |
| MS.gene76283.t1 | MTR_1g111160 | 28.571 | 161 | 115 | 0 | 102 | 262 | 6 | 166 | 1.33e-16 | 78.6 |
| MS.gene76283.t1 | MTR_1g111160 | 96.825 | 252 | 8 | 0 | 1 | 252 | 1 | 252 | 1.83e-180 | 498 |
| MS.gene76283.t1 | MTR_1g111160 | 28.571 | 161 | 115 | 0 | 102 | 262 | 6 | 166 | 1.71e-16 | 78.2 |
| MS.gene76283.t1 | MTR_7g024540 | 31.731 | 312 | 173 | 8 | 21 | 295 | 33 | 341 | 2.09e-40 | 144 |
| MS.gene76283.t1 | MTR_6g007165 | 29.927 | 274 | 181 | 4 | 1 | 270 | 44 | 310 | 2.02e-32 | 125 |
| MS.gene76283.t1 | MTR_8g085230 | 91.429 | 35 | 3 | 0 | 279 | 313 | 24 | 58 | 4.17e-15 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76283.t1 | AT3G12070 | 78.914 | 313 | 63 | 2 | 4 | 313 | 5 | 317 | 0.0 | 518 |
| MS.gene76283.t1 | AT3G12070 | 78.914 | 313 | 63 | 2 | 4 | 313 | 5 | 317 | 0.0 | 518 |
| MS.gene76283.t1 | AT3G12070 | 78.914 | 313 | 63 | 2 | 4 | 313 | 5 | 317 | 0.0 | 518 |
| MS.gene76283.t1 | AT5G12210 | 79.233 | 313 | 65 | 0 | 1 | 313 | 9 | 321 | 0.0 | 514 |
| MS.gene76283.t1 | AT5G12210 | 78.914 | 313 | 65 | 1 | 1 | 313 | 9 | 320 | 0.0 | 508 |
| MS.gene76283.t1 | AT3G12070 | 76.444 | 225 | 50 | 2 | 4 | 225 | 5 | 229 | 9.88e-127 | 361 |
| MS.gene76283.t1 | AT2G39550 | 30.838 | 334 | 192 | 7 | 7 | 303 | 38 | 369 | 1.72e-43 | 153 |
| MS.gene76283.t1 | AT5G40280 | 30.279 | 251 | 152 | 5 | 11 | 242 | 76 | 322 | 8.70e-25 | 104 |
| MS.gene76283.t1 | AT5G40280 | 30.120 | 166 | 111 | 2 | 82 | 242 | 189 | 354 | 9.86e-20 | 89.7 |
Find 81 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACTACCCTTCATCTTCT+TGG | 0.261585 | 1.1:-78515580 | MS.gene76283:CDS |
| CAGGATGAATGGAGCATATT+GGG | 0.267550 | 1.1:-78515605 | MS.gene76283:CDS |
| CTCACATCGGGGAGTTTCTC+TGG | 0.280448 | 1.1:+78514223 | None:intergenic |
| CAAAACATGGATGGTGGTTT+TGG | 0.289121 | 1.1:-78515028 | MS.gene76283:CDS |
| ATGTCTTCCATACATACTTT+GGG | 0.299619 | 1.1:-78513850 | MS.gene76283:CDS |
| CAAAACCACCATCCATGTTT+TGG | 0.317491 | 1.1:+78515029 | None:intergenic |
| TCAGGATGAATGGAGCATAT+TGG | 0.343392 | 1.1:-78515606 | MS.gene76283:CDS |
| GAAGCTTATAAAATTTATCT+TGG | 0.350387 | 1.1:-78514048 | MS.gene76283:CDS |
| ATGTTCATGAGGTTGTTTCC+TGG | 0.351492 | 1.1:-78515540 | MS.gene76283:CDS |
| AAAATTTATCTTGGACTGTC+AGG | 0.372699 | 1.1:-78514039 | MS.gene76283:intron |
| GATGTCTTCCATACATACTT+TGG | 0.373905 | 1.1:-78513851 | MS.gene76283:CDS |
| AATTTATAACATACTTTGTC+CGG | 0.393696 | 1.1:+78514979 | None:intergenic |
| ATATTTATGTTAGATATTGT+CGG | 0.401735 | 1.1:-78515297 | MS.gene76283:intron |
| CTAGCCTGATCATGATTGAC+AGG | 0.404299 | 1.1:-78514091 | MS.gene76283:CDS |
| GCTTGCTCTCTTTAATAAGT+TGG | 0.408266 | 1.1:-78515428 | MS.gene76283:CDS |
| CTGTGGTAATGGAGCATCTC+AGG | 0.410757 | 1.1:-78515624 | MS.gene76283:CDS |
| TCATGATTGACAGGGTTCAT+TGG | 0.418389 | 1.1:-78514082 | MS.gene76283:CDS |
| CTTGTTGACAAGGACCTACT+TGG | 0.420276 | 1.1:-78514295 | MS.gene76283:CDS |
| CTTTCACTTCTTGAATATCC+TGG | 0.427177 | 1.1:-78512125 | MS.gene76283:CDS |
| GTTAAATCTGGAGGTCTGAA+TGG | 0.430357 | 1.1:-78514250 | MS.gene76283:CDS |
| TGTGAGCGACAAGTTAAATC+TGG | 0.432622 | 1.1:-78514262 | MS.gene76283:CDS |
| CATACATACTTTGGGGTGGC+TGG | 0.444722 | 1.1:-78513842 | MS.gene76283:intron |
| CAGCCACCCCAAAGTATGTA+TGG | 0.456363 | 1.1:+78513843 | None:intergenic |
| TCTATCGTTATTACATCGCT+TGG | 0.465751 | 1.1:-78515095 | MS.gene76283:CDS |
| TCCACGGGTAAAGCGTAAGC+TGG | 0.469768 | 1.1:+78512086 | None:intergenic |
| GGGTCTATCGGTTTCACTCC+AGG | 0.471736 | 1.1:+78512107 | None:intergenic |
| CTCAGTGTATACAAGATATG+TGG | 0.477416 | 1.1:+78515463 | None:intergenic |
| ATGTCTTGTCAGCACGATGA+AGG | 0.483039 | 1.1:-78515514 | MS.gene76283:CDS |
| GTATATACTATCTGTTCAAA+AGG | 0.484346 | 1.1:-78515740 | MS.gene76283:intron |
| CATTATAAGTTGCCAAAACA+TGG | 0.488331 | 1.1:-78515041 | MS.gene76283:CDS |
| GAACCCTGTCAATCATGATC+AGG | 0.491649 | 1.1:+78514087 | None:intergenic |
| GGATGTTATTGATGCAGATA+AGG | 0.492901 | 1.1:-78515407 | MS.gene76283:CDS |
| GTCGGCCTGCAAAATGAAGA+TGG | 0.494036 | 1.1:-78515279 | MS.gene76283:CDS |
| ATGGAGCATCTCAGGATGAA+TGG | 0.499810 | 1.1:-78515616 | MS.gene76283:CDS |
| CAGGGTTCATTGGATCAGTA+AGG | 0.502509 | 1.1:-78514072 | MS.gene76283:CDS |
| AAGACATCCACAGCATCGTC+TGG | 0.516911 | 1.1:+78513866 | None:intergenic |
| ACAAGGACCTACTTGGTTGG+TGG | 0.520652 | 1.1:-78514288 | MS.gene76283:CDS |
| AATTCTATTCACAACTTCCA+CGG | 0.521607 | 1.1:+78512070 | None:intergenic |
| TTAAATCTGGAGGTCTGAAT+GGG | 0.524274 | 1.1:-78514249 | MS.gene76283:CDS |
| CCGGCATGAGATTCCCCACC+AGG | 0.525028 | 1.1:+78514998 | None:intergenic |
| TTGACAAGGACCTACTTGGT+TGG | 0.527369 | 1.1:-78514291 | MS.gene76283:CDS |
| CGAGCTTTCCAAGAAGATGA+AGG | 0.529805 | 1.1:+78515572 | None:intergenic |
| ATTCTATTCACAACTTCCAC+GGG | 0.542859 | 1.1:+78512071 | None:intergenic |
| AAAGCGTAAGCTGGGTCTAT+CGG | 0.544980 | 1.1:+78512095 | None:intergenic |
| TGTCTTGTCAGCACGATGAA+GGG | 0.545558 | 1.1:-78515513 | MS.gene76283:CDS |
| TCAGGTATGCTACTCATGGT+GGG | 0.548778 | 1.1:-78514120 | MS.gene76283:intron |
| GTCAGGTATGCTACTCATGG+TGG | 0.565359 | 1.1:-78514121 | MS.gene76283:intron |
| CTTGTCAGGTATGCTACTCA+TGG | 0.572625 | 1.1:-78514124 | MS.gene76283:intron |
| AGAAGAGAAGATGGGAGACC+TGG | 0.577675 | 1.1:-78515782 | None:intergenic |
| GTATACACTGAGTGCCGTGC+AGG | 0.577702 | 1.1:-78515452 | MS.gene76283:CDS |
| CTTCCATACATACTTTGGGG+TGG | 0.577729 | 1.1:-78513846 | MS.gene76283:CDS |
| GTGCTGACAAGACATGATCC+AGG | 0.581900 | 1.1:+78515522 | None:intergenic |
| CCACGGGTAAAGCGTAAGCT+GGG | 0.582138 | 1.1:+78512087 | None:intergenic |
| GGATAGAATAAACGCGGACA+AGG | 0.590013 | 1.1:-78515074 | MS.gene76283:CDS |
| TGTCTTCCATACATACTTTG+GGG | 0.593880 | 1.1:-78513849 | MS.gene76283:CDS |
| TCGGCCTGCAAAATGAAGAT+GGG | 0.599894 | 1.1:-78515278 | MS.gene76283:CDS |
| GTCTTGTCAGCACGATGAAG+GGG | 0.600004 | 1.1:-78515512 | MS.gene76283:CDS |
| CCCAGCTTACGCTTTACCCG+TGG | 0.603195 | 1.1:-78512087 | MS.gene76283:CDS |
| GAACGTGCTTCTCAGCAACC+AGG | 0.612396 | 1.1:+78515764 | None:intergenic |
| ATAAGTTGCCAAAACATGGA+TGG | 0.613589 | 1.1:-78515037 | MS.gene76283:CDS |
| GTTAGGACACAGACAATGGT+GGG | 0.616379 | 1.1:-78513901 | MS.gene76283:intron |
| CACATAACCACCAACCAAGT+AGG | 0.616652 | 1.1:+78514281 | None:intergenic |
| CGACACCGTTGATGTTCATG+AGG | 0.616684 | 1.1:-78515551 | MS.gene76283:CDS |
| CTAGTGACCCCGCTATAGCA+AGG | 0.617594 | 1.1:+78514320 | None:intergenic |
| TAGCCTGATCATGATTGACA+GGG | 0.618634 | 1.1:-78514090 | MS.gene76283:CDS |
| AGTTGCCAAAACATGGATGG+TGG | 0.618947 | 1.1:-78515034 | MS.gene76283:CDS |
| AGGATGAATGGAGCATATTG+GGG | 0.623889 | 1.1:-78515604 | MS.gene76283:CDS |
| AACAACCTCATGAACATCAA+CGG | 0.623947 | 1.1:+78515546 | None:intergenic |
| TGTTAGGACACAGACAATGG+TGG | 0.625784 | 1.1:-78513902 | MS.gene76283:intron |
| TCAGTGTATACAAGATATGT+GGG | 0.626212 | 1.1:+78515464 | None:intergenic |
| AGATAGACCAGACGATGCTG+TGG | 0.626541 | 1.1:-78513873 | MS.gene76283:CDS |
| GTCACTAGATCTTGTTGACA+AGG | 0.627119 | 1.1:-78514305 | MS.gene76283:CDS |
| GAGCTTTCCAAGAAGATGAA+GGG | 0.635153 | 1.1:+78515573 | None:intergenic |
| CCTGGTGGGGAATCTCATGC+CGG | 0.637466 | 1.1:-78514998 | MS.gene76283:CDS |
| AAAGAGAGCAAGCACCTGCA+CGG | 0.641834 | 1.1:+78515438 | None:intergenic |
| TCTTGTCAGCACGATGAAGG+GGG | 0.646653 | 1.1:-78515511 | MS.gene76283:CDS |
| TAGTGACCCCGCTATAGCAA+GGG | 0.662271 | 1.1:+78514321 | None:intergenic |
| AACTGTTAGGACACAGACAA+TGG | 0.674082 | 1.1:-78513905 | MS.gene76283:intron |
| TATGGGGTGAAGTTGATACC+CGG | 0.685066 | 1.1:-78515239 | MS.gene76283:intron |
| GAGCGACAAGTTAAATCTGG+AGG | 0.710603 | 1.1:-78514259 | MS.gene76283:CDS |
| TCGCTTGGATAGAATAAACG+CGG | 0.769521 | 1.1:-78515080 | MS.gene76283:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAAACAAAATTTAGT+CGG | - | chr1.1:78513339-78513358 | MS.gene76283:intron | 10.0% |
| !! | TTTATTCAATATAAGTAAAA+TGG | + | chr1.1:78513156-78513175 | None:intergenic | 10.0% |
| !! | AAAGTAGAAAATACAAAAAA+GGG | + | chr1.1:78514020-78514039 | None:intergenic | 15.0% |
| !! | ATATTTATGTTAGATATTGT+CGG | - | chr1.1:78512530-78512549 | MS.gene76283:intron | 15.0% |
| !!! | AAAGATGATATATTTAGTTT+TGG | + | chr1.1:78512142-78512161 | None:intergenic | 15.0% |
| !!! | ATTATTTTTACTCCTTTTAT+TGG | + | chr1.1:78513048-78513067 | None:intergenic | 15.0% |
| !!! | CTATTTTTATTTTAGTTGTT+TGG | - | chr1.1:78514645-78514664 | MS.gene76283:intron | 15.0% |
| !!! | TGAATTTGTTGTTTAAATTA+TGG | - | chr1.1:78512991-78513010 | MS.gene76283:intron | 15.0% |
| !!! | TTTAGTTTTGGAAATAATTT+AGG | + | chr1.1:78512130-78512149 | None:intergenic | 15.0% |
| !!! | TTTATTTGGAATTCAAAAAA+TGG | + | chr1.1:78513407-78513426 | None:intergenic | 15.0% |
| !! | AAAAAAAACAGATCTTGAAA+AGG | + | chr1.1:78512910-78512929 | None:intergenic | 20.0% |
| !! | AAACTGTGTAAATTGTAATA+TGG | + | chr1.1:78514761-78514780 | None:intergenic | 20.0% |
| !! | AATTTATAACATACTTTGTC+CGG | + | chr1.1:78512851-78512870 | None:intergenic | 20.0% |
| !! | ATAAATGTTAATGAGAAAGT+TGG | - | chr1.1:78515288-78515307 | MS.gene76283:intron | 20.0% |
| !! | ATAAGTAGAATACCAAATTA+TGG | + | chr1.1:78513283-78513302 | None:intergenic | 20.0% |
| !! | CAAAGTAGAAAATACAAAAA+AGG | + | chr1.1:78514021-78514040 | None:intergenic | 20.0% |
| !! | GAAGCTTATAAAATTTATCT+TGG | - | chr1.1:78513779-78513798 | MS.gene76283:intron | 20.0% |
| !! | TAAACAACAAATTCAAACTA+TGG | + | chr1.1:78512986-78513005 | None:intergenic | 20.0% |
| !! | TAAGTAGAATACCAAATTAT+GGG | + | chr1.1:78513282-78513301 | None:intergenic | 20.0% |
| !! | TTAAATATGATATTTGCTTC+CGG | + | chr1.1:78513127-78513146 | None:intergenic | 20.0% |
| !! | TTGTCTGTTAATAAATATAC+TGG | - | chr1.1:78512492-78512511 | MS.gene76283:intron | 20.0% |
| !!! | TTGATATATTGTTGTTTCTT+AGG | - | chr1.1:78515399-78515418 | MS.gene76283:CDS | 20.0% |
| !!! | TTTGTATTTTCTACTTTGTT+TGG | - | chr1.1:78514023-78514042 | MS.gene76283:intron | 20.0% |
| ! | ACATAAAACAAGATAGGATT+AGG | - | chr1.1:78515262-78515281 | MS.gene76283:CDS | 25.0% |
| ! | AGAATTAAGATAACCTCTTT+AGG | - | chr1.1:78513247-78513266 | MS.gene76283:intron | 25.0% |
| ! | AGTTACATGATATTGAATGT+TGG | - | chr1.1:78515171-78515190 | MS.gene76283:intron | 25.0% |
| ! | CAAAACAATAATAGCATCTA+TGG | + | chr1.1:78513657-78513676 | None:intergenic | 25.0% |
| ! | CTTATTTATCTTATAACTCC+AGG | + | chr1.1:78514870-78514889 | None:intergenic | 25.0% |
| ! | GCTCACAGTATTATTAATTT+GGG | + | chr1.1:78513182-78513201 | None:intergenic | 25.0% |
| ! | GTATATACTATCTGTTCAAA+AGG | - | chr1.1:78512087-78512106 | MS.gene76283:CDS | 25.0% |
| ! | GTTACATGATATTGAATGTT+GGG | - | chr1.1:78515172-78515191 | MS.gene76283:intron | 25.0% |
| ! | GTTATATGCCAAATTGAATT+CGG | + | chr1.1:78515603-78515622 | None:intergenic | 25.0% |
| ! | TCACAAATTGTATCCTTTAA+AGG | - | chr1.1:78512443-78512462 | MS.gene76283:intron | 25.0% |
| ! | TGAAAAAACAGAGAAAATAG+AGG | - | chr1.1:78514302-78514321 | MS.gene76283:CDS | 25.0% |
| ! | TGCTCACAGTATTATTAATT+TGG | + | chr1.1:78513183-78513202 | None:intergenic | 25.0% |
| ! | TTATATGCCAAATTGAATTC+GGG | + | chr1.1:78515602-78515621 | None:intergenic | 25.0% |
| ! | TTGAAAAGATTTACTCACAT+CGG | + | chr1.1:78513620-78513639 | None:intergenic | 25.0% |
| ! | TTTGAAAAGTTTATCCAAAC+TGG | - | chr1.1:78515006-78515025 | MS.gene76283:CDS | 25.0% |
| !! | ACTCATTGCATTCTTTTATT+TGG | + | chr1.1:78513421-78513440 | None:intergenic | 25.0% |
| !! | ATAATGTTTTCACTAGAAGA+AGG | - | chr1.1:78513063-78513082 | MS.gene76283:intron | 25.0% |
| !! | TATCTTTCTTCTGAAAAACA+AGG | + | chr1.1:78512174-78512193 | None:intergenic | 25.0% |
| !!! | GAGTAAATCTTTTCAAGTTT+AGG | - | chr1.1:78513624-78513643 | MS.gene76283:intron | 25.0% |
| AAAATTTATCTTGGACTGTC+AGG | - | chr1.1:78513788-78513807 | MS.gene76283:intron | 30.0% | |
| AATTCTATTCACAACTTCCA+CGG | + | chr1.1:78515760-78515779 | None:intergenic | 30.0% | |
| ACATATCACAGAACCTTTAA+AGG | + | chr1.1:78512459-78512478 | None:intergenic | 30.0% | |
| AGAAAAAGCAATATCTCACA+AGG | + | chr1.1:78513460-78513479 | None:intergenic | 30.0% | |
| AGAAAATAGAGGAAAAACAG+TGG | - | chr1.1:78514313-78514332 | MS.gene76283:CDS | 30.0% | |
| AGTCAATCAACAATCAAAAC+CGG | + | chr1.1:78512636-78512655 | None:intergenic | 30.0% | |
| ATGTCTTCCATACATACTTT+GGG | - | chr1.1:78513977-78513996 | MS.gene76283:intron | 30.0% | |
| ATTAAGATAACCTCTTTAGG+AGG | - | chr1.1:78513250-78513269 | MS.gene76283:intron | 30.0% | |
| ATTTCGAAAGATACGCAAAA+AGG | - | chr1.1:78514053-78514072 | MS.gene76283:CDS | 30.0% | |
| CATTATAAGTTGCCAAAACA+TGG | - | chr1.1:78512786-78512805 | MS.gene76283:intron | 30.0% | |
| GAATACCAAATTATGGGATT+TGG | + | chr1.1:78513276-78513295 | None:intergenic | 30.0% | |
| GACAACCTTTAAATGCATTA+GGG | + | chr1.1:78514848-78514867 | None:intergenic | 30.0% | |
| GTAGTCACATAAAACAAGAT+AGG | - | chr1.1:78515256-78515275 | MS.gene76283:CDS | 30.0% | |
| GTGAAAGATTGTAAACATGA+GGG | - | chr1.1:78514230-78514249 | MS.gene76283:CDS | 30.0% | |
| GTTAACTGTTATGACTTATG+AGG | - | chr1.1:78513869-78513888 | MS.gene76283:CDS | 30.0% | |
| TAAGTAGCAAAATAGCATAC+CGG | + | chr1.1:78512610-78512629 | None:intergenic | 30.0% | |
| TATCCAAACTGGTTAAAATC+TGG | - | chr1.1:78515017-78515036 | MS.gene76283:CDS | 30.0% | |
| TCAGTGTATACAAGATATGT+GGG | + | chr1.1:78512366-78512385 | None:intergenic | 30.0% | |
| TGAAAAGATTTACTCACATC+GGG | + | chr1.1:78513619-78513638 | None:intergenic | 30.0% | |
| TGGAAAGTTTGTAGTAGAAA+GGG | - | chr1.1:78514665-78514684 | MS.gene76283:intron | 30.0% | |
| TGGAATGTAACTTTAGCAAA+AGG | - | chr1.1:78514695-78514714 | MS.gene76283:intron | 30.0% | |
| TGGTTAAAATCTGGATATCA+TGG | - | chr1.1:78515026-78515045 | MS.gene76283:CDS | 30.0% | |
| TTAAAATCTGGATATCATGG+TGG | - | chr1.1:78515029-78515048 | MS.gene76283:CDS | 30.0% | |
| TTGGAAAGTTTGTAGTAGAA+AGG | - | chr1.1:78514664-78514683 | MS.gene76283:intron | 30.0% | |
| TTGTATGACCAGCATTATAA+GGG | + | chr1.1:78515567-78515586 | None:intergenic | 30.0% | |
| ! | ATGTTAATGAGAAAGTTGGT+TGG | - | chr1.1:78515292-78515311 | MS.gene76283:intron | 30.0% |
| ! | ATTTTCAGTTTTCTGTTGTG+TGG | - | chr1.1:78513480-78513499 | MS.gene76283:intron | 30.0% |
| ! | GTAGTAGAAAGGGTATAATA+TGG | - | chr1.1:78514675-78514694 | MS.gene76283:intron | 30.0% |
| ! | TTTAGCTTAACGTGGAAAAT+TGG | - | chr1.1:78514727-78514746 | MS.gene76283:intron | 30.0% |
| ! | TTTTCAGTTTTCTGTTGTGT+GGG | - | chr1.1:78513481-78513500 | MS.gene76283:intron | 30.0% |
| !! | ACTGATAAAAAGTGTTGATC+GGG | - | chr1.1:78515351-78515370 | MS.gene76283:intron | 30.0% |
| !! | CACTGATAAAAAGTGTTGAT+CGG | - | chr1.1:78515350-78515369 | MS.gene76283:intron | 30.0% |
| !! | TATCCAGATTTTAACCAGTT+TGG | + | chr1.1:78515023-78515042 | None:intergenic | 30.0% |
| !! | TTTCTGAAATTGTCGAAATG+TGG | - | chr1.1:78514890-78514909 | MS.gene76283:intron | 30.0% |
| !!! | ACTGAAATTTTAGCTTAACG+TGG | - | chr1.1:78514719-78514738 | MS.gene76283:intron | 30.0% |
| !!! | GAAAGATAGTTTTGAATCTG+TGG | - | chr1.1:78512186-78512205 | MS.gene76283:intron | 30.0% |
| !!! | GTTGTTTTATTTGTTGTTGC+AGG | - | chr1.1:78515678-78515697 | MS.gene76283:intron | 30.0% |
| !!! | GTTTTTTCCTTCTTCTTTTG+TGG | - | chr1.1:78513845-78513864 | MS.gene76283:CDS | 30.0% |
| !!! | TAGTTTTGAATCTGTGGTAA+TGG | - | chr1.1:78512192-78512211 | MS.gene76283:intron | 30.0% |
| !!! | TTCGAGTTTTTAAGTAGGAT+CGG | - | chr1.1:78514200-78514219 | MS.gene76283:intron | 30.0% |
| AAAATGCATAGAGTGTAGTC+AGG | - | chr1.1:78514177-78514196 | MS.gene76283:intron | 35.0% | |
| AAAGCATAAAGAATGCAGAC+TGG | + | chr1.1:78515541-78515560 | None:intergenic | 35.0% | |
| AACAACCTCATGAACATCAA+CGG | + | chr1.1:78512284-78512303 | None:intergenic | 35.0% | |
| AAGCATAAAGAATGCAGACT+GGG | + | chr1.1:78515540-78515559 | None:intergenic | 35.0% | |
| AAGTAGCAAAATAGCATACC+GGG | + | chr1.1:78512609-78512628 | None:intergenic | 35.0% | |
| AATGCATTTAAAGGTTGTCC+TGG | - | chr1.1:78514849-78514868 | MS.gene76283:intron | 35.0% | |
| ACAAGCCCTAATGCATTTAA+AGG | - | chr1.1:78514840-78514859 | MS.gene76283:intron | 35.0% | |
| AGGAATAGATGAACATGCAT+TGG | + | chr1.1:78512890-78512909 | None:intergenic | 35.0% | |
| ATAAGTTGCCAAAACATGGA+TGG | - | chr1.1:78512790-78512809 | MS.gene76283:intron | 35.0% | |
| ATCAAGTCCCGAATTCAATT+TGG | - | chr1.1:78515592-78515611 | MS.gene76283:CDS | 35.0% | |
| ATTCTATTCACAACTTCCAC+GGG | + | chr1.1:78515759-78515778 | None:intergenic | 35.0% | |
| ATTTAGGAATGAGAAGCAGA+CGG | + | chr1.1:78512114-78512133 | None:intergenic | 35.0% | |
| CAAAAAAACAGAGAAAGCAG+AGG | - | chr1.1:78514384-78514403 | MS.gene76283:intron | 35.0% | |
| CAAAAAACCAGAGAAAGTAG+TGG | - | chr1.1:78514343-78514362 | MS.gene76283:intron | 35.0% | |
| CTAAACCTTTGAATGCTAAG+AGG | - | chr1.1:78513208-78513227 | MS.gene76283:intron | 35.0% | |
| CTCAGTGTATACAAGATATG+TGG | + | chr1.1:78512367-78512386 | None:intergenic | 35.0% | |
| CTTTCACTTCTTGAATATCC+TGG | - | chr1.1:78515702-78515721 | MS.gene76283:intron | 35.0% | |
| GAAAAGATTTACTCACATCG+GGG | + | chr1.1:78513618-78513637 | None:intergenic | 35.0% | |
| GATGTCTTCCATACATACTT+TGG | - | chr1.1:78513976-78513995 | MS.gene76283:intron | 35.0% | |
| GCTTGCTCTCTTTAATAAGT+TGG | - | chr1.1:78512399-78512418 | MS.gene76283:intron | 35.0% | |
| GGAATAGATGAACATGCATT+GGG | + | chr1.1:78512889-78512908 | None:intergenic | 35.0% | |
| GGACAACCTTTAAATGCATT+AGG | + | chr1.1:78514849-78514868 | None:intergenic | 35.0% | |
| GGATGTTATTGATGCAGATA+AGG | - | chr1.1:78512420-78512439 | MS.gene76283:intron | 35.0% | |
| GGTGAAAGATTGTAAACATG+AGG | - | chr1.1:78514229-78514248 | MS.gene76283:CDS | 35.0% | |
| GTTAACACCACAAAAGAAGA+AGG | + | chr1.1:78513855-78513874 | None:intergenic | 35.0% | |
| GTTGTATGACCAGCATTATA+AGG | + | chr1.1:78515568-78515587 | None:intergenic | 35.0% | |
| TCTATCGTTATTACATCGCT+TGG | - | chr1.1:78512732-78512751 | MS.gene76283:intron | 35.0% | |
| TGTAACCTCTTAGCATTCAA+AGG | + | chr1.1:78513216-78513235 | None:intergenic | 35.0% | |
| TGTATGACCAGCATTATAAG+GGG | + | chr1.1:78515566-78515585 | None:intergenic | 35.0% | |
| TGTCTTCCATACATACTTTG+GGG | - | chr1.1:78513978-78513997 | MS.gene76283:intron | 35.0% | |
| TTAAATCTGGAGGTCTGAAT+GGG | - | chr1.1:78513578-78513597 | MS.gene76283:intron | 35.0% | |
| TTGTGTACGTTGAAACTGTT+AGG | - | chr1.1:78513909-78513928 | MS.gene76283:intron | 35.0% | |
| ! | AATGAAGATGGGTCTTTTTC+AGG | - | chr1.1:78512560-78512579 | MS.gene76283:intron | 35.0% |
| ! | TGTTTTTCCACTACTTTCTC+TGG | + | chr1.1:78514353-78514372 | None:intergenic | 35.0% |
| ! | TTTCAGTTTTCTGTTGTGTG+GGG | - | chr1.1:78513482-78513501 | MS.gene76283:intron | 35.0% |
| !! | ATGAAGATGGGTCTTTTTCA+GGG | - | chr1.1:78512561-78512580 | MS.gene76283:intron | 35.0% |
| !! | GCTATTTTGCTACTTAACTC+CGG | - | chr1.1:78512614-78512633 | MS.gene76283:intron | 35.0% |
| !! | TCTACTGACTTGTTTGTCTT+AGG | - | chr1.1:78512686-78512705 | MS.gene76283:intron | 35.0% |
| !!! | ACTTTCTCTGGTTTTTTGCT+TGG | + | chr1.1:78514341-78514360 | None:intergenic | 35.0% |
| !!! | AGTTTTTAAGTAGGATCGGT+AGG | - | chr1.1:78514204-78514223 | MS.gene76283:intron | 35.0% |
| !!! | GTCTTTTTCAGGGGATATAT+GGG | - | chr1.1:78512571-78512590 | MS.gene76283:intron | 35.0% |
| !!! | TCAGGTTCGAGTTTTTAAGT+AGG | - | chr1.1:78514195-78514214 | MS.gene76283:intron | 35.0% |
| !!! | TCTTTTTCAGGGGATATATG+GGG | - | chr1.1:78512572-78512591 | MS.gene76283:intron | 35.0% |
| AAATCTGGATATCATGGTGG+TGG | - | chr1.1:78515032-78515051 | MS.gene76283:CDS | 40.0% | |
| AACTGTTAGGACACAGACAA+TGG | - | chr1.1:78513922-78513941 | MS.gene76283:intron | 40.0% | |
| AATCTGGATATCATGGTGGT+GGG | - | chr1.1:78515033-78515052 | MS.gene76283:CDS | 40.0% | |
| ACACAACATTCCTTTCGTGT+GGG | + | chr1.1:78512954-78512973 | None:intergenic | 40.0% | |
| ACATGAACCGAAACATGAAG+TGG | + | chr1.1:78514111-78514130 | None:intergenic | 40.0% | |
| ACTCTGATGCAGCCAATAAA+AGG | - | chr1.1:78513033-78513052 | MS.gene76283:intron | 40.0% | |
| AGGATGAATGGAGCATATTG+GGG | - | chr1.1:78512223-78512242 | MS.gene76283:intron | 40.0% | |
| ATCGTGTTTCGACTTTACTC+AGG | + | chr1.1:78514448-78514467 | None:intergenic | 40.0% | |
| CAGGATGAATGGAGCATATT+GGG | - | chr1.1:78512222-78512241 | MS.gene76283:intron | 40.0% | |
| CATGAACCGAAACATGAAGT+GGG | + | chr1.1:78514110-78514129 | None:intergenic | 40.0% | |
| GAGCTTTCCAAGAAGATGAA+GGG | + | chr1.1:78512257-78512276 | None:intergenic | 40.0% | |
| GCTTCGTAAGTAAGATCAGT+AGG | - | chr1.1:78514262-78514281 | MS.gene76283:CDS | 40.0% | |
| GTAAAGTCGAAACACGATTG+AGG | - | chr1.1:78514450-78514469 | MS.gene76283:intron | 40.0% | |
| GTCACTAGATCTTGTTGACA+AGG | - | chr1.1:78513522-78513541 | MS.gene76283:intron | 40.0% | |
| GTGTGTCAATATGTCTGCTT+TGG | - | chr1.1:78513376-78513395 | MS.gene76283:intron | 40.0% | |
| GTTAAATCTGGAGGTCTGAA+TGG | - | chr1.1:78513577-78513596 | MS.gene76283:intron | 40.0% | |
| TAAAGAATGCAGACTGGGAT+AGG | + | chr1.1:78515535-78515554 | None:intergenic | 40.0% | |
| TAGCCTGATCATGATTGACA+GGG | - | chr1.1:78513737-78513756 | MS.gene76283:intron | 40.0% | |
| TCAGGATGAATGGAGCATAT+TGG | - | chr1.1:78512221-78512240 | MS.gene76283:intron | 40.0% | |
| TCATATGATCCTACGTTCCA+CGG | + | chr1.1:78514478-78514497 | None:intergenic | 40.0% | |
| TCATGATTGACAGGGTTCAT+TGG | - | chr1.1:78513745-78513764 | MS.gene76283:intron | 40.0% | |
| TCGCTTGGATAGAATAAACG+CGG | - | chr1.1:78512747-78512766 | MS.gene76283:intron | 40.0% | |
| TGGACTGTCAGGTTATTTAG+TGG | - | chr1.1:78513799-78513818 | MS.gene76283:intron | 40.0% | |
| TGGTAGAGTTTCGTCTTATG+TGG | - | chr1.1:78515312-78515331 | MS.gene76283:intron | 40.0% | |
| TGGTTTAAGCAGTGGGATTA+GGG | - | chr1.1:78513097-78513116 | MS.gene76283:intron | 40.0% | |
| TGTGAGCGACAAGTTAAATC+TGG | - | chr1.1:78513565-78513584 | MS.gene76283:intron | 40.0% | |
| TTGACTACCCTTCATCTTCT+TGG | - | chr1.1:78512247-78512266 | MS.gene76283:intron | 40.0% | |
| TTGTTGCCCACTTCATGTTT+CGG | - | chr1.1:78514101-78514120 | MS.gene76283:CDS | 40.0% | |
| TTTCTCCTGGTTTAAGCAGT+GGG | - | chr1.1:78513090-78513109 | MS.gene76283:intron | 40.0% | |
| ! | AAGACCCATCTTCATTTTGC+AGG | + | chr1.1:78512556-78512575 | None:intergenic | 40.0% |
| ! | AAGGAATGTTGTGTGTCGTT+AGG | - | chr1.1:78512960-78512979 | MS.gene76283:intron | 40.0% |
| ! | ATGTTCATGAGGTTGTTTCC+TGG | - | chr1.1:78512287-78512306 | MS.gene76283:intron | 40.0% |
| ! | CAAAACCACCATCCATGTTT+TGG | + | chr1.1:78512801-78512820 | None:intergenic | 40.0% |
| ! | GCTTTTACCCCTTATAATGC+TGG | - | chr1.1:78515556-78515575 | MS.gene76283:CDS | 40.0% |
| ! | TACCTGACAAGATCTAAAGC+TGG | + | chr1.1:78513694-78513713 | None:intergenic | 40.0% |
| ! | TTCAGTTTTCTGTTGTGTGG+GGG | - | chr1.1:78513483-78513502 | MS.gene76283:intron | 40.0% |
| !! | CAAAACATGGATGGTGGTTT+TGG | - | chr1.1:78512799-78512818 | MS.gene76283:intron | 40.0% |
| !! | TACCAGCTTTAGATCTTGTC+AGG | - | chr1.1:78513689-78513708 | MS.gene76283:intron | 40.0% |
| !! | TTGTGTTGACTGTTCACTCA+AGG | - | chr1.1:78513309-78513328 | MS.gene76283:intron | 40.0% |
| !! | TTTCGTTTTTCCCACACGAA+AGG | - | chr1.1:78512941-78512960 | MS.gene76283:intron | 40.0% |
| !!! | CTGCAGATTTTAAAGTCGTG+TGG | + | chr1.1:78515153-78515172 | None:intergenic | 40.0% |
| !!! | GGTCTTTTTCAGGGGATATA+TGG | - | chr1.1:78512570-78512589 | MS.gene76283:intron | 40.0% |
| !!! | TGAAGATGGGTCTTTTTCAG+GGG | - | chr1.1:78512562-78512581 | MS.gene76283:intron | 40.0% |
| AAAGCGTAAGCTGGGTCTAT+CGG | + | chr1.1:78515735-78515754 | None:intergenic | 45.0% | |
| AGAAGAAGGAACCTTTCTCC+TGG | - | chr1.1:78513077-78513096 | MS.gene76283:intron | 45.0% | |
| AGTTGCCAAAACATGGATGG+TGG | - | chr1.1:78512793-78512812 | MS.gene76283:intron | 45.0% | |
| ATGTCTTGTCAGCACGATGA+AGG | - | chr1.1:78512313-78512332 | MS.gene76283:intron | 45.0% | |
| ATGTGACTACACGTACAGCA+TGG | + | chr1.1:78515246-78515265 | None:intergenic | 45.0% | |
| CACACAACATTCCTTTCGTG+TGG | + | chr1.1:78512955-78512974 | None:intergenic | 45.0% | |
| CACATAACCACCAACCAAGT+AGG | + | chr1.1:78513549-78513568 | None:intergenic | 45.0% | |
| CACTGCTTAAACCAGGAGAA+AGG | + | chr1.1:78513091-78513110 | None:intergenic | 45.0% | |
| CAGGGTTCATTGGATCAGTA+AGG | - | chr1.1:78513755-78513774 | MS.gene76283:intron | 45.0% | |
| CGAGCTTTCCAAGAAGATGA+AGG | + | chr1.1:78512258-78512277 | None:intergenic | 45.0% | |
| CTAATCCCACTGCTTAAACC+AGG | + | chr1.1:78513098-78513117 | None:intergenic | 45.0% | |
| CTAGCCTGATCATGATTGAC+AGG | - | chr1.1:78513736-78513755 | MS.gene76283:intron | 45.0% | |
| CTGGTTTAAGCAGTGGGATT+AGG | - | chr1.1:78513096-78513115 | MS.gene76283:intron | 45.0% | |
| CTTGTCAGGTATGCTACTCA+TGG | - | chr1.1:78513703-78513722 | MS.gene76283:intron | 45.0% | |
| CTTGTTGACAAGGACCTACT+TGG | - | chr1.1:78513532-78513551 | MS.gene76283:intron | 45.0% | |
| CTTTCTCCTGGTTTAAGCAG+TGG | - | chr1.1:78513089-78513108 | MS.gene76283:intron | 45.0% | |
| GAACCCTGTCAATCATGATC+AGG | + | chr1.1:78513743-78513762 | None:intergenic | 45.0% | |
| GAGCGACAAGTTAAATCTGG+AGG | - | chr1.1:78513568-78513587 | MS.gene76283:intron | 45.0% | |
| GGAGGCCAAATCCCATAATT+TGG | - | chr1.1:78513268-78513287 | MS.gene76283:intron | 45.0% | |
| GGATAGAATAAACGCGGACA+AGG | - | chr1.1:78512753-78512772 | MS.gene76283:intron | 45.0% | |
| GTGGGACGAACTATGTCAAA+AGG | - | chr1.1:78514529-78514548 | MS.gene76283:intron | 45.0% | |
| GTGGGCAACAAAAAGTCACT+AGG | + | chr1.1:78514092-78514111 | None:intergenic | 45.0% | |
| GTTAGGACACAGACAATGGT+GGG | - | chr1.1:78513926-78513945 | MS.gene76283:intron | 45.0% | |
| TCAGGTATGCTACTCATGGT+GGG | - | chr1.1:78513707-78513726 | MS.gene76283:intron | 45.0% | |
| TCGGCCTGCAAAATGAAGAT+GGG | - | chr1.1:78512549-78512568 | MS.gene76283:intron | 45.0% | |
| TGTCTTGTCAGCACGATGAA+GGG | - | chr1.1:78512314-78512333 | MS.gene76283:intron | 45.0% | |
| TGTTAGGACACAGACAATGG+TGG | - | chr1.1:78513925-78513944 | MS.gene76283:intron | 45.0% | |
| TTGACAAGGACCTACTTGGT+TGG | - | chr1.1:78513536-78513555 | MS.gene76283:intron | 45.0% | |
| TTTAAGTAGGATCGGTAGGC+TGG | - | chr1.1:78514208-78514227 | MS.gene76283:intron | 45.0% | |
| ! | ATGGAGCATCTCAGGATGAA+TGG | - | chr1.1:78512211-78512230 | MS.gene76283:intron | 45.0% |
| ! | CTTCCATACATACTTTGGGG+TGG | - | chr1.1:78513981-78514000 | MS.gene76283:intron | 45.0% |
| !! | TATGGGGTGAAGTTGATACC+CGG | - | chr1.1:78512588-78512607 | MS.gene76283:intron | 45.0% |
| AAAGAGAGCAAGCACCTGCA+CGG | + | chr1.1:78512392-78512411 | None:intergenic | 50.0% | |
| AAGACATCCACAGCATCGTC+TGG | + | chr1.1:78513964-78513983 | None:intergenic | 50.0% | |
| AATGCAGACTGGGATAGGCA+GGG | + | chr1.1:78515530-78515549 | None:intergenic | 50.0% | |
| ACAAGGACCTACTTGGTTGG+TGG | - | chr1.1:78513539-78513558 | MS.gene76283:intron | 50.0% | |
| AGATAGACCAGACGATGCTG+TGG | - | chr1.1:78513954-78513973 | MS.gene76283:intron | 50.0% | |
| AGTTCGTCCCACTGTAGTCA+GGG | + | chr1.1:78514521-78514540 | None:intergenic | 50.0% | |
| CAGCCACCCCAAAGTATGTA+TGG | + | chr1.1:78513987-78514006 | None:intergenic | 50.0% | |
| CCACGCTTTAGCACAAGCAT+AGG | + | chr1.1:78514157-78514176 | None:intergenic | 50.0% | |
| CCTATGCTTGTGCTAAAGCG+TGG | - | chr1.1:78514154-78514173 | MS.gene76283:intron | 50.0% | |
| CGACACCGTTGATGTTCATG+AGG | - | chr1.1:78512276-78512295 | MS.gene76283:intron | 50.0% | |
| GTCAGGTATGCTACTCATGG+TGG | - | chr1.1:78513706-78513725 | MS.gene76283:intron | 50.0% | |
| GTCGGCCTGCAAAATGAAGA+TGG | - | chr1.1:78512548-78512567 | MS.gene76283:intron | 50.0% | |
| GTCTTGTCAGCACGATGAAG+GGG | - | chr1.1:78512315-78512334 | MS.gene76283:intron | 50.0% | |
| TAGTGACCCCGCTATAGCAA+GGG | + | chr1.1:78513509-78513528 | None:intergenic | 50.0% | |
| TAGTTCGTCCCACTGTAGTC+AGG | + | chr1.1:78514522-78514541 | None:intergenic | 50.0% | |
| TCTTGTCAGCACGATGAAGG+GGG | - | chr1.1:78512316-78512335 | MS.gene76283:intron | 50.0% | |
| TGGGATTTGGCCTCCTAAAG+AGG | + | chr1.1:78513263-78513282 | None:intergenic | 50.0% | |
| ! | GTGCTGACAAGACATGATCC+AGG | + | chr1.1:78512308-78512327 | None:intergenic | 50.0% |
| !! | CATACATACTTTGGGGTGGC+TGG | - | chr1.1:78513985-78514004 | MS.gene76283:intron | 50.0% |
| !! | CTGTGGTAATGGAGCATCTC+AGG | - | chr1.1:78512203-78512222 | MS.gene76283:intron | 50.0% |
| !! | GGATATCATGGTGGTGGGAA+TGG | - | chr1.1:78515038-78515057 | MS.gene76283:CDS | 50.0% |
| !! | GGGGGTTTTGGTGGAAATGT+TGG | - | chr1.1:78512334-78512353 | MS.gene76283:intron | 50.0% |
| !! | TTTTGGTTGCACACCTGGTG+GGG | - | chr1.1:78512816-78512835 | MS.gene76283:intron | 50.0% |
| !!! | GTTTTGGTTGCACACCTGGT+GGG | - | chr1.1:78512815-78512834 | MS.gene76283:intron | 50.0% |
| CACTCGACCCTGACTACAGT+GGG | - | chr1.1:78514511-78514530 | MS.gene76283:intron | 55.0% | |
| CCACGGGTAAAGCGTAAGCT+GGG | + | chr1.1:78515743-78515762 | None:intergenic | 55.0% | |
| CTAGTGACCCCGCTATAGCA+AGG | + | chr1.1:78513510-78513529 | None:intergenic | 55.0% | |
| CTCACATCGGGGAGTTTCTC+TGG | + | chr1.1:78513607-78513626 | None:intergenic | 55.0% | |
| GAACGTGCTTCTCAGCAACC+AGG | + | chr1.1:78512066-78512085 | None:intergenic | 55.0% | |
| GAATGCAGACTGGGATAGGC+AGG | + | chr1.1:78515531-78515550 | None:intergenic | 55.0% | |
| GCAGTGGGATTAGGGCATAC+CGG | - | chr1.1:78513105-78513124 | MS.gene76283:intron | 55.0% | |
| TCCACGGGTAAAGCGTAAGC+TGG | + | chr1.1:78515744-78515763 | None:intergenic | 55.0% | |
| ! | CAGCACGATGAAGGGGGTTT+TGG | - | chr1.1:78512322-78512341 | MS.gene76283:intron | 55.0% |
| ! | GTATACACTGAGTGCCGTGC+AGG | - | chr1.1:78512375-78512394 | MS.gene76283:intron | 55.0% |
| !! | AGGGTCGAGTGCTGGTTCAT+AGG | + | chr1.1:78514502-78514521 | None:intergenic | 55.0% |
| !! | ATTGAGGTGCCGTGGAACGT+AGG | - | chr1.1:78514466-78514485 | MS.gene76283:intron | 55.0% |
| !! | CACGATGAAGGGGGTTTTGG+TGG | - | chr1.1:78512325-78512344 | MS.gene76283:intron | 55.0% |
| !! | GAAACACGATTGAGGTGCCG+TGG | - | chr1.1:78514458-78514477 | MS.gene76283:intron | 55.0% |
| !! | GGGTCTATCGGTTTCACTCC+AGG | + | chr1.1:78515723-78515742 | None:intergenic | 55.0% |
| !!! | GGTGGTTTTGGTTGCACACC+TGG | - | chr1.1:78512811-78512830 | MS.gene76283:intron | 55.0% |
| !!! | GGTTTTGGTTGCACACCTGG+TGG | - | chr1.1:78512814-78512833 | MS.gene76283:intron | 55.0% |
| CCCAGCTTACGCTTTACCCG+TGG | - | chr1.1:78515740-78515759 | MS.gene76283:intron | 60.0% | |
| CCTGGTGGGGAATCTCATGC+CGG | - | chr1.1:78512829-78512848 | MS.gene76283:intron | 60.0% | |
| CTGTAGTCAGGGTCGAGTGC+TGG | + | chr1.1:78514510-78514529 | None:intergenic | 60.0% | |
| GCACTCGACCCTGACTACAG+TGG | - | chr1.1:78514510-78514529 | MS.gene76283:intron | 60.0% | |
| ! | TGTGGGGGCCCTTGCTATAG+CGG | - | chr1.1:78513498-78513517 | MS.gene76283:intron | 60.0% |
| CCGGCATGAGATTCCCCACC+AGG | + | chr1.1:78512832-78512851 | None:intergenic | 65.0% | |
| ! | GTGGGGGCCCTTGCTATAGC+GGG | - | chr1.1:78513499-78513518 | MS.gene76283:intron | 65.0% |
| ! | TGGGGGCCCTTGCTATAGCG+GGG | - | chr1.1:78513500-78513519 | MS.gene76283:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 78512055 | 78515794 | 78512055 | ID=MS.gene76283 |
| chr1.1 | mRNA | 78512055 | 78515794 | 78512055 | ID=MS.gene76283.t1;Parent=MS.gene76283 |
| chr1.1 | exon | 78515741 | 78515794 | 78515741 | ID=MS.gene76283.t1.exon1;Parent=MS.gene76283.t1 |
| chr1.1 | CDS | 78515741 | 78515794 | 78515741 | ID=cds.MS.gene76283.t1;Parent=MS.gene76283.t1 |
| chr1.1 | exon | 78515398 | 78515665 | 78515398 | ID=MS.gene76283.t1.exon2;Parent=MS.gene76283.t1 |
| chr1.1 | CDS | 78515398 | 78515665 | 78515398 | ID=cds.MS.gene76283.t1;Parent=MS.gene76283.t1 |
| chr1.1 | exon | 78515240 | 78515306 | 78515240 | ID=MS.gene76283.t1.exon3;Parent=MS.gene76283.t1 |
| chr1.1 | CDS | 78515240 | 78515306 | 78515240 | ID=cds.MS.gene76283.t1;Parent=MS.gene76283.t1 |
| chr1.1 | exon | 78514993 | 78515141 | 78514993 | ID=MS.gene76283.t1.exon4;Parent=MS.gene76283.t1 |
| chr1.1 | CDS | 78514993 | 78515141 | 78514993 | ID=cds.MS.gene76283.t1;Parent=MS.gene76283.t1 |
| chr1.1 | exon | 78514228 | 78514361 | 78514228 | ID=MS.gene76283.t1.exon5;Parent=MS.gene76283.t1 |
| chr1.1 | CDS | 78514228 | 78514361 | 78514228 | ID=cds.MS.gene76283.t1;Parent=MS.gene76283.t1 |
| chr1.1 | exon | 78514040 | 78514138 | 78514040 | ID=MS.gene76283.t1.exon6;Parent=MS.gene76283.t1 |
| chr1.1 | CDS | 78514040 | 78514138 | 78514040 | ID=cds.MS.gene76283.t1;Parent=MS.gene76283.t1 |
| chr1.1 | exon | 78513843 | 78513918 | 78513843 | ID=MS.gene76283.t1.exon7;Parent=MS.gene76283.t1 |
| chr1.1 | CDS | 78513843 | 78513918 | 78513843 | ID=cds.MS.gene76283.t1;Parent=MS.gene76283.t1 |
| chr1.1 | exon | 78512055 | 78512149 | 78512055 | ID=MS.gene76283.t1.exon8;Parent=MS.gene76283.t1 |
| chr1.1 | CDS | 78512055 | 78512149 | 78512055 | ID=cds.MS.gene76283.t1;Parent=MS.gene76283.t1 |
| Gene Sequence |
| Protein sequence |
