Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08800.t1 | XP_024629075.1 | 98.4 | 313 | 5 | 0 | 1 | 313 | 1 | 313 | 1.10E-102 | 383.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08800.t1 | Q84J75 | 87.5 | 313 | 39 | 0 | 1 | 313 | 9 | 321 | 4.3e-87 | 322.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08800.t1 | A0A396GUS6 | 98.4 | 313 | 5 | 0 | 1 | 313 | 1 | 313 | 8.0e-103 | 383.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029385 | MS.gene08800 | PPI |
| MS.gene71852 | MS.gene08800 | PPI |
| MS.gene013090 | MS.gene08800 | PPI |
| MS.gene09288 | MS.gene08800 | PPI |
| MS.gene023504 | MS.gene08800 | PPI |
| MS.gene76283 | MS.gene08800 | PPI |
| MS.gene08956 | MS.gene08800 | PPI |
| MS.gene37916 | MS.gene08800 | PPI |
| MS.gene065113 | MS.gene08800 | PPI |
| MS.gene020444 | MS.gene08800 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08800.t1 | MTR_1g111160 | 92.652 | 313 | 23 | 0 | 1 | 313 | 1 | 313 | 0.0 | 599 |
| MS.gene08800.t1 | MTR_1g111160 | 90.657 | 289 | 27 | 0 | 1 | 289 | 1 | 289 | 0.0 | 540 |
| MS.gene08800.t1 | MTR_1g111160 | 92.218 | 257 | 20 | 0 | 1 | 257 | 1 | 257 | 1.09e-176 | 489 |
| MS.gene08800.t1 | MTR_1g111160 | 27.500 | 160 | 116 | 0 | 103 | 262 | 7 | 166 | 6.25e-16 | 76.6 |
| MS.gene08800.t1 | MTR_1g111160 | 89.286 | 252 | 27 | 0 | 1 | 252 | 1 | 252 | 1.08e-166 | 463 |
| MS.gene08800.t1 | MTR_1g111160 | 27.500 | 160 | 116 | 0 | 103 | 262 | 7 | 166 | 7.13e-16 | 76.3 |
| MS.gene08800.t1 | MTR_7g024540 | 31.410 | 312 | 174 | 7 | 21 | 295 | 33 | 341 | 9.74e-42 | 148 |
| MS.gene08800.t1 | MTR_6g007165 | 30.657 | 274 | 179 | 4 | 1 | 270 | 44 | 310 | 1.05e-34 | 131 |
| MS.gene08800.t1 | MTR_8g085230 | 94.286 | 35 | 2 | 0 | 279 | 313 | 24 | 58 | 1.02e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08800.t1 | AT5G12210 | 80.511 | 313 | 61 | 0 | 1 | 313 | 9 | 321 | 0.0 | 524 |
| MS.gene08800.t1 | AT3G12070 | 79.299 | 314 | 62 | 2 | 3 | 313 | 4 | 317 | 0.0 | 521 |
| MS.gene08800.t1 | AT3G12070 | 79.299 | 314 | 62 | 2 | 3 | 313 | 4 | 317 | 0.0 | 521 |
| MS.gene08800.t1 | AT3G12070 | 79.299 | 314 | 62 | 2 | 3 | 313 | 4 | 317 | 0.0 | 521 |
| MS.gene08800.t1 | AT5G12210 | 80.192 | 313 | 61 | 1 | 1 | 313 | 9 | 320 | 0.0 | 517 |
| MS.gene08800.t1 | AT3G12070 | 77.876 | 226 | 47 | 2 | 3 | 225 | 4 | 229 | 1.87e-129 | 368 |
| MS.gene08800.t1 | AT2G39550 | 32.362 | 309 | 171 | 6 | 32 | 303 | 62 | 369 | 2.19e-43 | 153 |
| MS.gene08800.t1 | AT5G40280 | 32.864 | 213 | 133 | 4 | 37 | 242 | 113 | 322 | 3.16e-24 | 102 |
| MS.gene08800.t1 | AT5G40280 | 30.120 | 166 | 111 | 2 | 82 | 242 | 189 | 354 | 1.95e-20 | 92.0 |
Find 68 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGCCTGATCATGATTGAT+AGG | 0.270530 | 4.2:-12986281 | MS.gene08800:CDS |
| ATGTCTATCATACATACTTT+GGG | 0.346369 | 4.2:-12986049 | MS.gene08800:CDS |
| GAAGCTTATAAAGTTTATCT+TGG | 0.359856 | 4.2:-12986238 | MS.gene08800:CDS |
| GGTGGATTTGGTTGCACACC+TGG | 0.360124 | 4.2:-12988130 | MS.gene08800:CDS |
| CTCACATCAGGGAGTTTCTC+TGG | 0.361859 | 4.2:+12986414 | None:intergenic |
| TCAGGATGAATGGAGCATAC+TGG | 0.362998 | 4.2:-12988985 | MS.gene08800:CDS |
| AACTGTTAGGACACAGAAAA+TGG | 0.374598 | 4.2:-12986104 | MS.gene08800:intron |
| CTTGTTGACAAGGACTTACT+TGG | 0.380516 | 4.2:-12986486 | MS.gene08800:CDS |
| GATGTCTATCATACATACTT+TGG | 0.407924 | 4.2:-12986050 | MS.gene08800:CDS |
| TCATCTTATTGATGTTGATA+AGG | 0.414501 | 4.2:-12988786 | MS.gene08800:CDS |
| CAGGATGAATGGAGCATACT+GGG | 0.420427 | 4.2:-12988984 | MS.gene08800:CDS |
| CTTTCACTTCTTGAATATCC+TGG | 0.427177 | 4.2:-12984459 | MS.gene08800:CDS |
| CCAAGCGACGTAATATTGAT+AGG | 0.429921 | 4.2:+12988209 | None:intergenic |
| TTAACTGCCCTTGATCTTCT+CGG | 0.431904 | 4.2:-12988959 | MS.gene08800:CDS |
| TGTGAGCGACAAGTTAAATC+TGG | 0.432622 | 4.2:-12986453 | MS.gene08800:CDS |
| ATCAGTTGTCACCACGATGA+TGG | 0.437364 | 4.2:-12988893 | MS.gene08800:CDS |
| TACCCGTAGACGTTGTCAAT+CGG | 0.440295 | 4.2:-12984407 | MS.gene08800:CDS |
| ATGTTGATGAGGTTGTTTCA+TGG | 0.447603 | 4.2:-12988919 | MS.gene08800:CDS |
| AAAGTTTATCTTGGACTGCC+AGG | 0.456260 | 4.2:-12986229 | MS.gene08800:intron |
| CATACATACTTTGGGGTGGC+TGG | 0.466568 | 4.2:-12986041 | MS.gene08800:intron |
| AATCCGATTGACAACGTCTA+CGG | 0.470884 | 4.2:+12984404 | None:intergenic |
| TCAGTTGTCACCACGATGAT+GGG | 0.473093 | 4.2:-12988892 | MS.gene08800:CDS |
| CTGTGGTAATGGAACATCTC+AGG | 0.476418 | 4.2:-12989003 | MS.gene08800:CDS |
| GTTAAATCTGGAGGTCTGAA+TGG | 0.477849 | 4.2:-12986441 | MS.gene08800:CDS |
| ATCCGATTGACAACGTCTAC+GGG | 0.478203 | 4.2:+12984405 | None:intergenic |
| GTTAGCCTGCAAAATGAAGA+TGG | 0.479793 | 4.2:-12988384 | MS.gene08800:CDS |
| GGGTCTATCGGTTTCACTCC+AGG | 0.481923 | 4.2:+12984441 | None:intergenic |
| CCTATCAATATTACGTCGCT+TGG | 0.484014 | 4.2:-12988209 | MS.gene08800:CDS |
| GAACCCTATCAATCATGATC+AGG | 0.489404 | 4.2:+12986277 | None:intergenic |
| ATGGAACATCTCAGGATGAA+TGG | 0.497514 | 4.2:-12988995 | MS.gene08800:CDS |
| TAGCCTGATCATGATTGATA+GGG | 0.498142 | 4.2:-12986280 | MS.gene08800:CDS |
| GATTTGGTTGCACACCTGGT+GGG | 0.498689 | 4.2:-12988126 | MS.gene08800:CDS |
| ATTTGGTTGCACACCTGGTG+GGG | 0.500235 | 4.2:-12988125 | MS.gene08800:CDS |
| CCAGCATGAGATTCCCCACC+AGG | 0.510818 | 4.2:+12988112 | None:intergenic |
| ATATATACTATCAGTTGAAA+AGG | 0.512188 | 4.2:-12989132 | MS.gene08800:intron |
| ACAAGGACTTACTTGGTTGG+TGG | 0.520652 | 4.2:-12986479 | MS.gene08800:CDS |
| GGATTTGGTTGCACACCTGG+TGG | 0.522911 | 4.2:-12988127 | MS.gene08800:CDS |
| TTGACAAGGACTTACTTGGT+TGG | 0.525370 | 4.2:-12986482 | MS.gene08800:CDS |
| GCCAGGTATGCTACTCATGG+TGG | 0.535317 | 4.2:-12986311 | MS.gene08800:intron |
| TCATGATTGATAGGGTTCAC+TGG | 0.538238 | 4.2:-12986272 | MS.gene08800:CDS |
| AAAGCATAAGCCGGGTCTAT+CGG | 0.539627 | 4.2:+12984429 | None:intergenic |
| TAGACATCCACAGCATCATC+CGG | 0.549532 | 4.2:+12986065 | None:intergenic |
| CCAGGTATGCTACTCATGGT+GGG | 0.555106 | 4.2:-12986310 | MS.gene08800:intron |
| GGATAGAATAAATGTGGAGA+AGG | 0.559748 | 4.2:-12988188 | MS.gene08800:CDS |
| TGGTGGAATTTCAGACAGAC+CGG | 0.576594 | 4.2:-12986084 | MS.gene08800:CDS |
| CTTGCCAGGTATGCTACTCA+TGG | 0.581436 | 4.2:-12986314 | MS.gene08800:intron |
| CCTGGTGGGGAATCTCATGC+TGG | 0.582123 | 4.2:-12988112 | MS.gene08800:CDS |
| AACAACCTCATCAACATCTA+CGG | 0.586257 | 4.2:+12988925 | None:intergenic |
| TCTACGGGTAAAGCATAAGC+CGG | 0.595209 | 4.2:+12984420 | None:intergenic |
| CAGTTGTCACCACGATGATG+GGG | 0.596464 | 4.2:-12988891 | MS.gene08800:CDS |
| TAGGGTTCACTGGATCAGTA+AGG | 0.600098 | 4.2:-12986262 | MS.gene08800:CDS |
| TTAGCCTGCAAAATGAAGAT+GGG | 0.605987 | 4.2:-12988383 | MS.gene08800:CDS |
| CTAGTGACCCCGTTATAGCA+AGG | 0.608314 | 4.2:+12986511 | None:intergenic |
| TCGCTTGGATAGAATAAATG+TGG | 0.614658 | 4.2:-12988194 | MS.gene08800:CDS |
| GTCACTAGATCTTGTTGACA+AGG | 0.624947 | 4.2:-12986496 | MS.gene08800:CDS |
| TAGTGACCCCGTTATAGCAA+GGG | 0.631959 | 4.2:+12986512 | None:intergenic |
| CTACGGGTAAAGCATAAGCC+GGG | 0.632140 | 4.2:+12984421 | None:intergenic |
| CTATCATACATACTTTGGGG+TGG | 0.633143 | 4.2:-12986045 | MS.gene08800:CDS |
| AGACAGACCGGATGATGCTG+TGG | 0.645799 | 4.2:-12986072 | MS.gene08800:CDS |
| TGGAGTGAAACCGATAGACC+CGG | 0.648295 | 4.2:-12984439 | MS.gene08800:CDS |
| TGTTAGGACACAGAAAATGG+TGG | 0.653329 | 4.2:-12986101 | MS.gene08800:intron |
| TGTCTATCATACATACTTTG+GGG | 0.654532 | 4.2:-12986048 | MS.gene08800:CDS |
| CGACACCGTAGATGTTGATG+AGG | 0.660761 | 4.2:-12988930 | MS.gene08800:CDS |
| CTGAGTGTATACAAAATGTG+TGG | 0.673916 | 4.2:+12988842 | None:intergenic |
| AGTTGTCACCACGATGATGG+GGG | 0.678776 | 4.2:-12988890 | MS.gene08800:CDS |
| TATGGGGTGAAGTTGATACC+CGG | 0.685066 | 4.2:-12988344 | MS.gene08800:intron |
| AGGATGAATGGAGCATACTG+GGG | 0.699697 | 4.2:-12988983 | MS.gene08800:CDS |
| GAGCGACAAGTTAAATCTGG+AGG | 0.710603 | 4.2:-12986450 | MS.gene08800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATGTTAAATTGAATTT+GGG | + | chr4.2:12988971-12988990 | None:intergenic | 10.0% |
| !!! | ATTTTTTTATTAGAAGAATT+GGG | - | chr4.2:12987851-12987870 | MS.gene08800:intron | 10.0% |
| !!! | TATATTCAAATATCTTTTAA+TGG | + | chr4.2:12988852-12988871 | None:intergenic | 10.0% |
| !!! | TATTTTTTTATTAGAAGAAT+TGG | - | chr4.2:12987850-12987869 | MS.gene08800:intron | 10.0% |
| !! | AACAAAAAAAATCATTAAAG+AGG | - | chr4.2:12986318-12986337 | MS.gene08800:intron | 15.0% |
| !! | AATTCAATTTAACATATAAC+AGG | - | chr4.2:12988972-12988991 | MS.gene08800:CDS | 15.0% |
| !! | AGTTATATAATAATGAATGT+CGG | - | chr4.2:12988582-12988601 | MS.gene08800:intron | 15.0% |
| !! | ATAACATTCAATATGAAATT+AGG | + | chr4.2:12987833-12987852 | None:intergenic | 15.0% |
| !! | ATTAAAAATGAAACATAGTT+GGG | + | chr4.2:12984473-12984492 | None:intergenic | 15.0% |
| !! | GTTATATGTTAAATTGAATT+TGG | + | chr4.2:12988972-12988991 | None:intergenic | 15.0% |
| !! | GTTGTAAAAATAGTATAATA+TGG | - | chr4.2:12988073-12988092 | MS.gene08800:intron | 15.0% |
| !! | TATTAAAAATGAAACATAGT+TGG | + | chr4.2:12984474-12984493 | None:intergenic | 15.0% |
| !!! | AGAGATAATATTTTTTATGT+TGG | + | chr4.2:12985789-12985808 | None:intergenic | 15.0% |
| !!! | ATAAAACTTGTTAATACATA+AGG | + | chr4.2:12985055-12985074 | None:intergenic | 15.0% |
| !!! | ATAGTCTTTTTTATGTAAAT+TGG | - | chr4.2:12985969-12985988 | MS.gene08800:intron | 15.0% |
| !!! | CTATTTAGTTTTTAATTGTT+TGG | - | chr4.2:12988043-12988062 | MS.gene08800:intron | 15.0% |
| !!! | TTTTTTTATTAGAAGAATTG+GGG | - | chr4.2:12987852-12987871 | MS.gene08800:intron | 15.0% |
| !! | AATAGAGAAAATATACTTTC+TGG | + | chr4.2:12985925-12985944 | None:intergenic | 20.0% |
| !! | AGAATAGATGAAATACAAAA+AGG | + | chr4.2:12987549-12987568 | None:intergenic | 20.0% |
| !! | ATATATACTATCAGTTGAAA+AGG | - | chr4.2:12984421-12984440 | MS.gene08800:CDS | 20.0% |
| !! | ATGGCAAATATTAATATTGT+CGG | + | chr4.2:12986677-12986696 | None:intergenic | 20.0% |
| !! | ATTCATTATTATATAACTGC+AGG | + | chr4.2:12988580-12988599 | None:intergenic | 20.0% |
| !! | CATTTAGATTATATTGATGT+CGG | - | chr4.2:12987625-12987644 | MS.gene08800:intron | 20.0% |
| !! | CTTATAAGATTAATAATGAG+TGG | - | chr4.2:12986191-12986210 | MS.gene08800:intron | 20.0% |
| !! | GAATAGATGAAATACAAAAA+GGG | + | chr4.2:12987548-12987567 | None:intergenic | 20.0% |
| !! | GTTATATAATAATGAATGTC+GGG | - | chr4.2:12988583-12988602 | MS.gene08800:intron | 20.0% |
| !! | TAAAAAAGACTATGTTATAG+AGG | + | chr4.2:12985962-12985981 | None:intergenic | 20.0% |
| !!! | ATGTATTAACAAGTTTTATG+TGG | - | chr4.2:12985056-12985075 | MS.gene08800:intron | 20.0% |
| !!! | ATTGTTCCTTATTTGATTTT+GGG | + | chr4.2:12985621-12985640 | None:intergenic | 20.0% |
| !!! | CTTTTTTATGTAAATTGGAT+TGG | - | chr4.2:12985974-12985993 | MS.gene08800:intron | 20.0% |
| !!! | GAAAAAAACTCTTTTTTGAT+GGG | - | chr4.2:12986228-12986247 | MS.gene08800:intron | 20.0% |
| !!! | GCATTTAATTTTAGATCATT+TGG | - | chr4.2:12987881-12987900 | MS.gene08800:intron | 20.0% |
| !!! | TATTGTTCCTTATTTGATTT+TGG | + | chr4.2:12985622-12985641 | None:intergenic | 20.0% |
| !!! | TGAAAAAAACTCTTTTTTGA+TGG | - | chr4.2:12986227-12986246 | MS.gene08800:intron | 20.0% |
| !!! | TGTATTAACAAGTTTTATGT+GGG | - | chr4.2:12985057-12985076 | MS.gene08800:intron | 20.0% |
| !!! | TTTATTTGGAATTCAGAAAA+TGG | + | chr4.2:12986942-12986961 | None:intergenic | 20.0% |
| ! | AAAAATAAGCCAATCTTTAC+CGG | - | chr4.2:12985029-12985048 | MS.gene08800:intron | 25.0% |
| ! | AAAAATATGCCAATTCAAAC+AGG | + | chr4.2:12984852-12984871 | None:intergenic | 25.0% |
| ! | AAAAATTCCACTAAATAACC+TGG | + | chr4.2:12987345-12987364 | None:intergenic | 25.0% |
| ! | ACATAAGTAATTGTATTGTC+AGG | + | chr4.2:12989032-12989051 | None:intergenic | 25.0% |
| ! | ATGTCTATCATACATACTTT+GGG | - | chr4.2:12987504-12987523 | MS.gene08800:intron | 25.0% |
| ! | ATTTCAAGAGATAGACAAAA+AGG | - | chr4.2:12987688-12987707 | MS.gene08800:intron | 25.0% |
| ! | CATTGCATATTAAAATGACT+AGG | + | chr4.2:12985887-12985906 | None:intergenic | 25.0% |
| ! | GAAAACAAGAAATCTTCAAA+AGG | + | chr4.2:12985546-12985565 | None:intergenic | 25.0% |
| ! | GAAGCTTATAAAGTTTATCT+TGG | - | chr4.2:12987315-12987334 | MS.gene08800:intron | 25.0% |
| ! | GAGAAACAAAGAAAAACAAT+AGG | - | chr4.2:12988821-12988840 | MS.gene08800:CDS | 25.0% |
| ! | TAATCACTCAAAGATCAAAA+TGG | + | chr4.2:12985250-12985269 | None:intergenic | 25.0% |
| ! | TCATCTTATTGATGTTGATA+AGG | - | chr4.2:12984767-12984786 | MS.gene08800:intron | 25.0% |
| ! | TCTCAAAAGGTTAAACTATT+AGG | - | chr4.2:12987940-12987959 | MS.gene08800:intron | 25.0% |
| ! | TTATCTATGTTGAAACTGTT+AGG | - | chr4.2:12987436-12987455 | MS.gene08800:intron | 25.0% |
| ! | TTGTCTATCTCTTGAAATTA+TGG | + | chr4.2:12987686-12987705 | None:intergenic | 25.0% |
| ! | TTTCTGTGTAAATTATAACG+TGG | + | chr4.2:12988159-12988178 | None:intergenic | 25.0% |
| !! | ACTCATTGCATTCTTTTATT+TGG | + | chr4.2:12986956-12986975 | None:intergenic | 25.0% |
| !! | TCAAATATCTTTTAATGGTC+AGG | + | chr4.2:12988847-12988866 | None:intergenic | 25.0% |
| !! | TTTTATTCATAAGCTTCTCA+AGG | - | chr4.2:12984915-12984934 | MS.gene08800:intron | 25.0% |
| !!! | GAGAAAATCTTTTCAAGTTT+AGG | - | chr4.2:12987159-12987178 | MS.gene08800:intron | 25.0% |
| !!! | TTGTTCCTTATTTGATTTTG+GGG | + | chr4.2:12985620-12985639 | None:intergenic | 25.0% |
| AAACTATCTTTCTTCTGCAA+AGG | + | chr4.2:12984525-12984544 | None:intergenic | 30.0% | |
| AAAGAGGAAATCATTGCTAA+TGG | - | chr4.2:12986334-12986353 | MS.gene08800:intron | 30.0% | |
| AACCACCTATAAACTCATAA+GGG | + | chr4.2:12988310-12988329 | None:intergenic | 30.0% | |
| AAGAGGAAATCATTGCTAAT+GGG | - | chr4.2:12986335-12986354 | MS.gene08800:intron | 30.0% | |
| AGTAATTGTATTGTCAGGAA+AGG | + | chr4.2:12989027-12989046 | None:intergenic | 30.0% | |
| ATAGTCCCTTATGAGTTTAT+AGG | - | chr4.2:12988302-12988321 | MS.gene08800:intron | 30.0% | |
| ATGGAGCTTAAGAAAAATAC+CGG | + | chr4.2:12985231-12985250 | None:intergenic | 30.0% | |
| CATTATAAGCTGCAAAAACA+TGG | - | chr4.2:12985398-12985417 | MS.gene08800:intron | 30.0% | |
| GATGTCTATCATACATACTT+TGG | - | chr4.2:12987503-12987522 | MS.gene08800:intron | 30.0% | |
| GTAGTCACATAAAACAAGAT+AGG | - | chr4.2:12988667-12988686 | MS.gene08800:intron | 30.0% | |
| TATAGTCCAAAAATGCAGTA+AGG | + | chr4.2:12985276-12985295 | None:intergenic | 30.0% | |
| TGGAATAGTTCAAACGTTAA+AGG | - | chr4.2:12988794-12988813 | MS.gene08800:CDS | 30.0% | |
| TGTCTATCATACATACTTTG+GGG | - | chr4.2:12987505-12987524 | MS.gene08800:intron | 30.0% | |
| TTTAGATCATTTGGTCATAG+AGG | - | chr4.2:12987890-12987909 | MS.gene08800:intron | 30.0% | |
| ! | GAAAAGATTTTCTCACATCA+GGG | + | chr4.2:12987153-12987172 | None:intergenic | 30.0% |
| ! | TGAAAAGATTTTCTCACATC+AGG | + | chr4.2:12987154-12987173 | None:intergenic | 30.0% |
| !! | AACTTGTTAATACATAAGGC+CGG | + | chr4.2:12985051-12985070 | None:intergenic | 30.0% |
| !! | ATTTTTCAACAAGCACTAAC+GGG | + | chr4.2:12988428-12988447 | None:intergenic | 30.0% |
| !! | GATTTTTCAACAAGCACTAA+CGG | + | chr4.2:12988429-12988448 | None:intergenic | 30.0% |
| !! | TTAACAAGTTTTATGTGGGT+CGG | - | chr4.2:12985061-12985080 | MS.gene08800:intron | 30.0% |
| !!! | ATGGTCTTATTGTTTTTCTC+AGG | - | chr4.2:12987195-12987214 | MS.gene08800:intron | 30.0% |
| !!! | CATGTTTTTTTCGTCTTTTG+TGG | - | chr4.2:12987377-12987396 | MS.gene08800:intron | 30.0% |
| !!! | GAAAGATAGTTTTGAATCTG+TGG | - | chr4.2:12984533-12984552 | MS.gene08800:intron | 30.0% |
| !!! | GTTGTTTTATTTGTTGTTGC+AGG | - | chr4.2:12989070-12989089 | MS.gene08800:intron | 30.0% |
| !!! | GTTTAACCTTTTGAGATACT+TGG | + | chr4.2:12987936-12987955 | None:intergenic | 30.0% |
| !!! | TAGTTTTGAATCTGTGGTAA+TGG | - | chr4.2:12984539-12984558 | MS.gene08800:intron | 30.0% |
| AACAACCTCATCAACATCTA+CGG | + | chr4.2:12984631-12984650 | None:intergenic | 35.0% | |
| AACCTAAGATAACAAGTCGA+TGG | + | chr4.2:12985303-12985322 | None:intergenic | 35.0% | |
| AACTGTTAGGACACAGAAAA+TGG | - | chr4.2:12987449-12987468 | MS.gene08800:intron | 35.0% | |
| ACTATGAGAAATTGGTAGGT+GGG | - | chr4.2:12986498-12986517 | MS.gene08800:CDS | 35.0% | |
| AGAAAGTAATCACACTGTTG+CGG | - | chr4.2:12988620-12988639 | MS.gene08800:intron | 35.0% | |
| AGAAATGTTAGCGAGAAAGT+TGG | - | chr4.2:12988699-12988718 | MS.gene08800:intron | 35.0% | |
| AGACAACCATTTGGATTGAA+GGG | - | chr4.2:12986262-12986281 | MS.gene08800:CDS | 35.0% | |
| AGGAACCCCAAAATCAAATA+AGG | - | chr4.2:12985612-12985631 | MS.gene08800:intron | 35.0% | |
| ATAAGCTGCAAAAACATGGA+TGG | - | chr4.2:12985402-12985421 | MS.gene08800:intron | 35.0% | |
| ATACTTTCTCTGAGTTGTGT+CGG | + | chr4.2:12985752-12985771 | None:intergenic | 35.0% | |
| ATGCCATAATTCTAAGCTTG+TGG | - | chr4.2:12987778-12987797 | MS.gene08800:intron | 35.0% | |
| CACAGCAGAAAACTGAAAAT+AGG | + | chr4.2:12987015-12987034 | None:intergenic | 35.0% | |
| CTGAGTGTATACAAAATGTG+TGG | + | chr4.2:12984714-12984733 | None:intergenic | 35.0% | |
| CTTTCACTTCTTGAATATCC+TGG | - | chr4.2:12989094-12989113 | MS.gene08800:intron | 35.0% | |
| GAACCACCTATAAACTCATA+AGG | + | chr4.2:12988311-12988330 | None:intergenic | 35.0% | |
| GAAGACTATGAGAAATTGGT+AGG | - | chr4.2:12986494-12986513 | MS.gene08800:CDS | 35.0% | |
| GATGCAATTGCAAGCTTATA+TGG | + | chr4.2:12986087-12986106 | None:intergenic | 35.0% | |
| GGATAGAATAAATGTGGAGA+AGG | - | chr4.2:12985365-12985384 | MS.gene08800:intron | 35.0% | |
| GTTGAAAAATCTACCTGAAC+TGG | - | chr4.2:12988438-12988457 | MS.gene08800:intron | 35.0% | |
| TAAATAGAACGACATGCATC+TGG | + | chr4.2:12988030-12988049 | None:intergenic | 35.0% | |
| TAAATGCATGAGAAAGAGAG+AGG | + | chr4.2:12987611-12987630 | None:intergenic | 35.0% | |
| TAGCCTGATCATGATTGATA+GGG | - | chr4.2:12987273-12987292 | MS.gene08800:intron | 35.0% | |
| TATGAGTTTATAGGTGGTTC+TGG | - | chr4.2:12988311-12988330 | MS.gene08800:intron | 35.0% | |
| TCGCTTGGATAGAATAAATG+TGG | - | chr4.2:12985359-12985378 | MS.gene08800:intron | 35.0% | |
| TCTAGCGTAAGGTTGAAAAT+TGG | - | chr4.2:12988125-12988144 | MS.gene08800:CDS | 35.0% | |
| TCTCTTGAAATTATGGCCAA+AGG | + | chr4.2:12987679-12987698 | None:intergenic | 35.0% | |
| TCTGTTGAAACTTGAAAGGT+GGG | + | chr4.2:12986159-12986178 | None:intergenic | 35.0% | |
| TGCCATAATTCTAAGCTTGT+GGG | - | chr4.2:12987779-12987798 | MS.gene08800:intron | 35.0% | |
| TGGACTAAACAACTACTTTG+AGG | + | chr4.2:12986067-12986086 | None:intergenic | 35.0% | |
| TGGAGCTTAAGAAAAATACC+GGG | + | chr4.2:12985230-12985249 | None:intergenic | 35.0% | |
| TGTCTCTGTTGAAACTTGAA+AGG | + | chr4.2:12986163-12986182 | None:intergenic | 35.0% | |
| TTAGCCTGCAAAATGAAGAT+GGG | - | chr4.2:12985170-12985189 | MS.gene08800:intron | 35.0% | |
| TTCTCAATAGAGAGCTGTAT+TGG | - | chr4.2:12988264-12988283 | MS.gene08800:intron | 35.0% | |
| ! | AATGAAGATGGGTCTTTTTC+AGG | - | chr4.2:12985181-12985200 | MS.gene08800:intron | 35.0% |
| ! | ATGTTGATGAGGTTGTTTCA+TGG | - | chr4.2:12984634-12984653 | MS.gene08800:intron | 35.0% |
| ! | ATTTTCAGTTTTCTGCTGTG+TGG | - | chr4.2:12987015-12987034 | MS.gene08800:intron | 35.0% |
| ! | TTACCACCTTACTGCATTTT+TGG | - | chr4.2:12985267-12985286 | MS.gene08800:intron | 35.0% |
| ! | TTCAAGTTTAGGTTCATTGC+TGG | - | chr4.2:12987170-12987189 | MS.gene08800:intron | 35.0% |
| ! | TTTTCAGTTTTCTGCTGTGT+GGG | - | chr4.2:12987016-12987035 | MS.gene08800:intron | 35.0% |
| !! | AAAAACATGGATGGTGGATT+TGG | - | chr4.2:12985411-12985430 | MS.gene08800:intron | 35.0% |
| !! | AACTGATTGTATGGTTCTGA+AGG | - | chr4.2:12986537-12986556 | MS.gene08800:intron | 35.0% |
| !! | ATCCATCGACTTGTTATCTT+AGG | - | chr4.2:12985298-12985317 | MS.gene08800:intron | 35.0% |
| !! | ATGAAGATGGGTCTTTTTCA+GGG | - | chr4.2:12985182-12985201 | MS.gene08800:intron | 35.0% |
| !! | GTTCTGAAGGCAACAATTAA+TGG | - | chr4.2:12986550-12986569 | MS.gene08800:intron | 35.0% |
| !! | TTACACAGAAAGTGCTACAT+GGG | - | chr4.2:12988168-12988187 | MS.gene08800:CDS | 35.0% |
| !! | TTTACACAGAAAGTGCTACA+TGG | - | chr4.2:12988167-12988186 | MS.gene08800:CDS | 35.0% |
| !! | TTTTCAAGAAGATGAGGTGA+GGG | - | chr4.2:12986472-12986491 | MS.gene08800:CDS | 35.0% |
| !!! | GTCTTTTTCAGGGGATATAT+GGG | - | chr4.2:12985192-12985211 | MS.gene08800:intron | 35.0% |
| !!! | GTGTCTTTTTCAAGAAGATG+AGG | - | chr4.2:12986466-12986485 | MS.gene08800:CDS | 35.0% |
| !!! | TCTTTTTCAGGGGATATATG+GGG | - | chr4.2:12985193-12985212 | MS.gene08800:intron | 35.0% |
| !!! | TTTTGGGGTTCCTATCAAAT+TGG | + | chr4.2:12985605-12985624 | None:intergenic | 35.0% |
| !!! | TTTTTCAAGAAGATGAGGTG+AGG | - | chr4.2:12986471-12986490 | MS.gene08800:CDS | 35.0% |
| AAAAATCTACCTGAACTGGC+TGG | - | chr4.2:12988442-12988461 | MS.gene08800:intron | 40.0% | |
| AAAGTTTATCTTGGACTGCC+AGG | - | chr4.2:12987324-12987343 | MS.gene08800:intron | 40.0% | |
| AACTGCAGGATTTGTAGTTG+TGG | + | chr4.2:12988566-12988585 | None:intergenic | 40.0% | |
| AATCCGATTGACAACGTCTA+CGG | + | chr4.2:12989152-12989171 | None:intergenic | 40.0% | |
| ACCTGGCAAGATCTAAAAAC+TGG | + | chr4.2:12987229-12987248 | None:intergenic | 40.0% | |
| AGGAAAAGCAATGCTTCACA+AGG | + | chr4.2:12986995-12987014 | None:intergenic | 40.0% | |
| AGTCCAAAAATGCAGTAAGG+TGG | + | chr4.2:12985273-12985292 | None:intergenic | 40.0% | |
| ATCAACCATAGGTTCAAGCA+TGG | - | chr4.2:12988467-12988486 | MS.gene08800:intron | 40.0% | |
| ATGGAACATCTCAGGATGAA+TGG | - | chr4.2:12984558-12984577 | MS.gene08800:intron | 40.0% | |
| ATTGTCAGGAAAGGATAGAC+AGG | + | chr4.2:12989018-12989037 | None:intergenic | 40.0% | |
| CACAAACCAAAACATGAAGC+AGG | + | chr4.2:12987746-12987765 | None:intergenic | 40.0% | |
| CCAAGCGACGTAATATTGAT+AGG | + | chr4.2:12985347-12985366 | None:intergenic | 40.0% | |
| CCTATCAATATTACGTCGCT+TGG | - | chr4.2:12985344-12985363 | MS.gene08800:intron | 40.0% | |
| CGGAAATGACAATGCTATGA+TGG | - | chr4.2:12988640-12988659 | MS.gene08800:intron | 40.0% | |
| CGTGAACCAAGTATCTCAAA+AGG | - | chr4.2:12987927-12987946 | MS.gene08800:intron | 40.0% | |
| CTAAACTAGACCACCCAAAT+TGG | + | chr4.2:12986791-12986810 | None:intergenic | 40.0% | |
| CTAAAGTGTGGACAATGCAT+AGG | - | chr4.2:12987803-12987822 | MS.gene08800:intron | 40.0% | |
| CTAGCCTGATCATGATTGAT+AGG | - | chr4.2:12987272-12987291 | MS.gene08800:intron | 40.0% | |
| CTATGCATTGTCCACACTTT+AGG | + | chr4.2:12987805-12987824 | None:intergenic | 40.0% | |
| CTCCATGGCATTTGTATGAT+TGG | + | chr4.2:12988195-12988214 | None:intergenic | 40.0% | |
| CTCTGTTGAAACTTGAAAGG+TGG | + | chr4.2:12986160-12986179 | None:intergenic | 40.0% | |
| CTTGTTGACAAGGACTTACT+TGG | - | chr4.2:12987067-12987086 | MS.gene08800:intron | 40.0% | |
| CTTTCTGGACATATTGTTGC+TGG | + | chr4.2:12985910-12985929 | None:intergenic | 40.0% | |
| GAACACATTGAATGAAGCAG+TGG | - | chr4.2:12986618-12986637 | MS.gene08800:intron | 40.0% | |
| GAACCCTATCAATCATGATC+AGG | + | chr4.2:12987279-12987298 | None:intergenic | 40.0% | |
| GAACGATACAATAGCAGTAG+AGG | - | chr4.2:12985698-12985717 | MS.gene08800:intron | 40.0% | |
| GAATCAAACATGAGACCTTG+AGG | + | chr4.2:12986759-12986778 | None:intergenic | 40.0% | |
| GACACTGAAATTCTAGCGTA+AGG | - | chr4.2:12988114-12988133 | MS.gene08800:CDS | 40.0% | |
| GACTATGAGAAATTGGTAGG+TGG | - | chr4.2:12986497-12986516 | MS.gene08800:CDS | 40.0% | |
| GAGACAACCATTTGGATTGA+AGG | - | chr4.2:12986261-12986280 | MS.gene08800:CDS | 40.0% | |
| GAGGGAAGACTATGAGAAAT+TGG | - | chr4.2:12986490-12986509 | MS.gene08800:CDS | 40.0% | |
| GCAGTCAATACAACACAACA+TGG | + | chr4.2:12986835-12986854 | None:intergenic | 40.0% | |
| GCATTCTTCATGAAACCTAG+TGG | - | chr4.2:12987710-12987729 | MS.gene08800:intron | 40.0% | |
| GTCACTAGATCTTGTTGACA+AGG | - | chr4.2:12987057-12987076 | MS.gene08800:intron | 40.0% | |
| GTCCCTTATGAGTTTATAGG+TGG | - | chr4.2:12988305-12988324 | MS.gene08800:intron | 40.0% | |
| GTCTCATGTTTGATTCTCTC+CGG | - | chr4.2:12986763-12986782 | MS.gene08800:intron | 40.0% | |
| GTTAAATCTGGAGGTCTGAA+TGG | - | chr4.2:12987112-12987131 | MS.gene08800:intron | 40.0% | |
| TACATAAGGCCGGTAAAGAT+TGG | + | chr4.2:12985041-12985060 | None:intergenic | 40.0% | |
| TAGCCAAGTGATGACTAACA+AGG | - | chr4.2:12986405-12986424 | MS.gene08800:intron | 40.0% | |
| TCATGATTGATAGGGTTCAC+TGG | - | chr4.2:12987281-12987300 | MS.gene08800:intron | 40.0% | |
| TCATTTGGTCATAGAGGCTT+TGG | - | chr4.2:12987896-12987915 | MS.gene08800:intron | 40.0% | |
| TGAGCTATAGATCCAAGTGT+TGG | - | chr4.2:12986574-12986593 | MS.gene08800:intron | 40.0% | |
| TGAGTTCCCTTCAATCCAAA+TGG | + | chr4.2:12986271-12986290 | None:intergenic | 40.0% | |
| TGTGAGCGACAAGTTAAATC+TGG | - | chr4.2:12987100-12987119 | MS.gene08800:intron | 40.0% | |
| TGTTACGAGCCTGTTTGAAT+TGG | - | chr4.2:12984840-12984859 | MS.gene08800:intron | 40.0% | |
| TGTTAGGACACAGAAAATGG+TGG | - | chr4.2:12987452-12987471 | MS.gene08800:intron | 40.0% | |
| TTAACTGCCCTTGATCTTCT+CGG | - | chr4.2:12984594-12984613 | MS.gene08800:intron | 40.0% | |
| TTGACAAGGACTTACTTGGT+TGG | - | chr4.2:12987071-12987090 | MS.gene08800:intron | 40.0% | |
| TTGTCAGGAAAGGATAGACA+GGG | + | chr4.2:12989017-12989036 | None:intergenic | 40.0% | |
| ! | AAGACCCATCTTCATTTTGC+AGG | + | chr4.2:12985177-12985196 | None:intergenic | 40.0% |
| ! | ATATTGTCGGCTAGTCATTC+CGG | + | chr4.2:12986664-12986683 | None:intergenic | 40.0% |
| ! | CAATTTGGGTGGTCTAGTTT+AGG | - | chr4.2:12986789-12986808 | MS.gene08800:intron | 40.0% |
| ! | CTATCATACATACTTTGGGG+TGG | - | chr4.2:12987508-12987527 | MS.gene08800:intron | 40.0% |
| ! | GAGATGATGGTTAAACCTAC+CGG | - | chr4.2:12986642-12986661 | MS.gene08800:intron | 40.0% |
| ! | GAGTTTTCCGAGAAGATCAA+GGG | + | chr4.2:12984604-12984623 | None:intergenic | 40.0% |
| ! | GCAGCTCTTGTTTGATAATC+AGG | + | chr4.2:12986017-12986036 | None:intergenic | 40.0% |
| ! | GTTAGCCTGCAAAATGAAGA+TGG | - | chr4.2:12985169-12985188 | MS.gene08800:intron | 40.0% |
| ! | TTATGTGGTTTGGGTTTGTG+TGG | - | chr4.2:12988730-12988749 | MS.gene08800:intron | 40.0% |
| ! | TTGTTGCCTGCTTCATGTTT+TGG | - | chr4.2:12987737-12987756 | MS.gene08800:intron | 40.0% |
| ! | TTTAGGTTCATTGCTGGAGA+TGG | - | chr4.2:12987176-12987195 | MS.gene08800:intron | 40.0% |
| ! | TTTCAGTTTTCTGCTGTGTG+GGG | - | chr4.2:12987017-12987036 | MS.gene08800:intron | 40.0% |
| !! | ACCAGTTTTTAGATCTTGCC+AGG | - | chr4.2:12987225-12987244 | MS.gene08800:intron | 40.0% |
| !! | ACTGATAAGAAGCGTTGATC+GGG | - | chr4.2:12988770-12988789 | MS.gene08800:intron | 40.0% |
| !! | ATGAGAAAGAGAGAGGTGTT+GGG | + | chr4.2:12987604-12987623 | None:intergenic | 40.0% |
| !! | CACTGATAAGAAGCGTTGAT+CGG | - | chr4.2:12988769-12988788 | MS.gene08800:intron | 40.0% |
| !! | CTATAGATCCAAGTGTTGGA+AGG | - | chr4.2:12986578-12986597 | MS.gene08800:intron | 40.0% |
| !! | TAACGCTGCTGTTTCAACAA+AGG | + | chr4.2:12986377-12986396 | None:intergenic | 40.0% |
| !! | TACACAGAAAGTGCTACATG+GGG | - | chr4.2:12988169-12988188 | MS.gene08800:CDS | 40.0% |
| !! | TTGTATTGACTGCTCACTCA+AGG | - | chr4.2:12986842-12986861 | MS.gene08800:intron | 40.0% |
| !!! | CTCTTTTTTGATGGGCTCTT+AGG | - | chr4.2:12986236-12986255 | MS.gene08800:CDS | 40.0% |
| !!! | GGTCTTTTTCAGGGGATATA+TGG | - | chr4.2:12985191-12985210 | MS.gene08800:intron | 40.0% |
| !!! | TGAAGATGGGTCTTTTTCAG+GGG | - | chr4.2:12985183-12985202 | MS.gene08800:intron | 40.0% |
| AAAGCATAAGCCGGGTCTAT+CGG | + | chr4.2:12989127-12989146 | None:intergenic | 45.0% | |
| AACCATAGGTTCAAGCATGG+TGG | - | chr4.2:12988470-12988489 | MS.gene08800:intron | 45.0% | |
| AACCCACTTGGGTTACAACA+TGG | + | chr4.2:12986696-12986715 | None:intergenic | 45.0% | |
| ACAAGGACTTACTTGGTTGG+TGG | - | chr4.2:12987074-12987093 | MS.gene08800:intron | 45.0% | |
| ACTGGCTGGATATCAACCAT+AGG | - | chr4.2:12988456-12988475 | MS.gene08800:intron | 45.0% | |
| AGCTGCAAAAACATGGATGG+TGG | - | chr4.2:12985405-12985424 | MS.gene08800:intron | 45.0% | |
| AGGATGAATGGAGCATACTG+GGG | - | chr4.2:12984570-12984589 | MS.gene08800:intron | 45.0% | |
| ATCAGTTGTCACCACGATGA+TGG | - | chr4.2:12984660-12984679 | MS.gene08800:intron | 45.0% | |
| ATCCGATTGACAACGTCTAC+GGG | + | chr4.2:12989151-12989170 | None:intergenic | 45.0% | |
| ATGAAGCAGTGGTGAGATGA+TGG | - | chr4.2:12986629-12986648 | MS.gene08800:intron | 45.0% | |
| ATGTTGTAACCCAAGTGGGT+TGG | - | chr4.2:12986695-12986714 | MS.gene08800:intron | 45.0% | |
| CAGGATGAATGGAGCATACT+GGG | - | chr4.2:12984569-12984588 | MS.gene08800:intron | 45.0% | |
| CGGCACTTGAACTGATTGTA+TGG | - | chr4.2:12986528-12986547 | MS.gene08800:CDS | 45.0% | |
| CTTAGGTCGAGACAACCATT+TGG | - | chr4.2:12986253-12986272 | MS.gene08800:CDS | 45.0% | |
| GAGCGACAAGTTAAATCTGG+AGG | - | chr4.2:12987103-12987122 | MS.gene08800:intron | 45.0% | |
| GCAGGCAACAAAAAACCACT+AGG | + | chr4.2:12987728-12987747 | None:intergenic | 45.0% | |
| GCTCCTTGTTAGTCATCACT+TGG | + | chr4.2:12986411-12986430 | None:intergenic | 45.0% | |
| GGCCAATCATACAAATGCCA+TGG | - | chr4.2:12988190-12988209 | MS.gene08800:CDS | 45.0% | |
| GGCCCACAAGCTTAGAATTA+TGG | + | chr4.2:12987784-12987803 | None:intergenic | 45.0% | |
| GGGCTTGGGACAAGTTAATA+GGG | + | chr4.2:12986139-12986158 | None:intergenic | 45.0% | |
| GTATCCTTTGACACGTGTGT+TGG | - | chr4.2:12984799-12984818 | MS.gene08800:intron | 45.0% | |
| GTGCTCGTCTTATGTGGTTT+GGG | - | chr4.2:12988721-12988740 | MS.gene08800:intron | 45.0% | |
| TACCCGTAGACGTTGTCAAT+CGG | - | chr4.2:12989146-12989165 | MS.gene08800:CDS | 45.0% | |
| TAGACATCCACAGCATCATC+CGG | + | chr4.2:12987491-12987510 | None:intergenic | 45.0% | |
| TAGGGTTCACTGGATCAGTA+AGG | - | chr4.2:12987291-12987310 | MS.gene08800:intron | 45.0% | |
| TAGTGACCCCGTTATAGCAA+GGG | + | chr4.2:12987044-12987063 | None:intergenic | 45.0% | |
| TCAAACATGAGACCTTGAGG+AGG | + | chr4.2:12986756-12986775 | None:intergenic | 45.0% | |
| TCAGGATGAATGGAGCATAC+TGG | - | chr4.2:12984568-12984587 | MS.gene08800:intron | 45.0% | |
| TCAGTTGTCACCACGATGAT+GGG | - | chr4.2:12984661-12984680 | MS.gene08800:intron | 45.0% | |
| TCTACGGGTAAAGCATAAGC+CGG | + | chr4.2:12989136-12989155 | None:intergenic | 45.0% | |
| TGAACCAACACACGTGTCAA+AGG | + | chr4.2:12984806-12984825 | None:intergenic | 45.0% | |
| TGCCATGTTGTAACCCAAGT+GGG | - | chr4.2:12986691-12986710 | MS.gene08800:intron | 45.0% | |
| TGGACTGCCAGGTTATTTAG+TGG | - | chr4.2:12987335-12987354 | MS.gene08800:intron | 45.0% | |
| TGGGCTTGGGACAAGTTAAT+AGG | + | chr4.2:12986140-12986159 | None:intergenic | 45.0% | |
| TGGTGGAATTTCAGACAGAC+CGG | - | chr4.2:12987469-12987488 | MS.gene08800:intron | 45.0% | |
| TTATGGCCAAAGGAAGTCAC+TGG | + | chr4.2:12987669-12987688 | None:intergenic | 45.0% | |
| TTGCCATGTTGTAACCCAAG+TGG | - | chr4.2:12986690-12986709 | MS.gene08800:intron | 45.0% | |
| ! | ATTCTCTCCGGTGCCAATTT+GGG | - | chr4.2:12986775-12986794 | MS.gene08800:intron | 45.0% |
| ! | CATGAGAAAGAGAGAGGTGT+TGG | + | chr4.2:12987605-12987624 | None:intergenic | 45.0% |
| ! | CGAGTTTTCCGAGAAGATCA+AGG | + | chr4.2:12984605-12984624 | None:intergenic | 45.0% |
| ! | GAAACTTGAAAGGTGGGCTT+GGG | + | chr4.2:12986153-12986172 | None:intergenic | 45.0% |
| ! | TGAAACTTGAAAGGTGGGCT+TGG | + | chr4.2:12986154-12986173 | None:intergenic | 45.0% |
| ! | TTCAGTTTTCTGCTGTGTGG+GGG | - | chr4.2:12987018-12987037 | MS.gene08800:intron | 45.0% |
| !! | AAGTTGGTGCTCGTCTTATG+TGG | - | chr4.2:12988715-12988734 | MS.gene08800:intron | 45.0% |
| !! | CCTATATGAAGTGCTGTGTG+CGG | - | chr4.2:12985572-12985591 | MS.gene08800:intron | 45.0% |
| !! | CGTGTGTTGGTTCACTTTGA+AGG | - | chr4.2:12984812-12984831 | MS.gene08800:intron | 45.0% |
| !! | CTATATGAAGTGCTGTGTGC+GGG | - | chr4.2:12985573-12985592 | MS.gene08800:intron | 45.0% |
| !! | CTGATAAGAAGCGTTGATCG+GGG | - | chr4.2:12988771-12988790 | MS.gene08800:intron | 45.0% |
| !! | CTGCTGTTTCAACAAAGGCA+GGG | + | chr4.2:12986372-12986391 | None:intergenic | 45.0% |
| !! | CTGTGGTAATGGAACATCTC+AGG | - | chr4.2:12984550-12984569 | MS.gene08800:intron | 45.0% |
| !! | TATGGGGTGAAGTTGATACC+CGG | - | chr4.2:12985209-12985228 | MS.gene08800:intron | 45.0% |
| !! | TCAAGCATGGTGGTGGAAAT+GGG | - | chr4.2:12988480-12988499 | MS.gene08800:intron | 45.0% |
| !! | TGAGAAAGAGAGAGGTGTTG+GGG | + | chr4.2:12987603-12987622 | None:intergenic | 45.0% |
| !! | TTCAAGCATGGTGGTGGAAA+TGG | - | chr4.2:12988479-12988498 | MS.gene08800:intron | 45.0% |
| !!! | TTTTTTTTTTTTAAATATTC+TGG | - | chr4.2:12985113-12985132 | MS.gene08800:intron | 5.0% |
| AAGCTTGTGGGCCTAAAGTG+TGG | - | chr4.2:12987791-12987810 | MS.gene08800:intron | 50.0% | |
| ATTTGGTTGCACACCTGGTG+GGG | - | chr4.2:12985428-12985447 | MS.gene08800:intron | 50.0% | |
| CACCACCATGCTTGAACCTA+TGG | + | chr4.2:12988475-12988494 | None:intergenic | 50.0% | |
| CACTGACCAGTGACTTCCTT+TGG | - | chr4.2:12987660-12987679 | MS.gene08800:intron | 50.0% | |
| CAGTTGTCACCACGATGATG+GGG | - | chr4.2:12984662-12984681 | MS.gene08800:intron | 50.0% | |
| CATAGGTTCAAGCATGGTGG+TGG | - | chr4.2:12988473-12988492 | MS.gene08800:intron | 50.0% | |
| CCAGGTATGCTACTCATGGT+GGG | - | chr4.2:12987243-12987262 | MS.gene08800:intron | 50.0% | |
| CCGCACACAGCACTTCATAT+AGG | + | chr4.2:12985575-12985594 | None:intergenic | 50.0% | |
| CGACACCGTAGATGTTGATG+AGG | - | chr4.2:12984623-12984642 | MS.gene08800:intron | 50.0% | |
| CTACGGGTAAAGCATAAGCC+GGG | + | chr4.2:12989135-12989154 | None:intergenic | 50.0% | |
| CTAGTGACCCCGTTATAGCA+AGG | + | chr4.2:12987045-12987064 | None:intergenic | 50.0% | |
| CTCACATCAGGGAGTTTCTC+TGG | + | chr4.2:12987142-12987161 | None:intergenic | 50.0% | |
| CTTGCCAGGTATGCTACTCA+TGG | - | chr4.2:12987239-12987258 | MS.gene08800:intron | 50.0% | |
| GACTAGGCAGAAGACGTCTT+GGG | + | chr4.2:12985871-12985890 | None:intergenic | 50.0% | |
| GAGCGCATGGTGACTAAGTT+TGG | - | chr4.2:12988218-12988237 | MS.gene08800:CDS | 50.0% | |
| GGTGCTCGTCTTATGTGGTT+TGG | - | chr4.2:12988720-12988739 | MS.gene08800:intron | 50.0% | |
| TAGACCACCCAAATTGGCAC+CGG | + | chr4.2:12986785-12986804 | None:intergenic | 50.0% | |
| TGACTAGGCAGAAGACGTCT+TGG | + | chr4.2:12985872-12985891 | None:intergenic | 50.0% | |
| TGGAGTGAAACCGATAGACC+CGG | - | chr4.2:12989114-12989133 | MS.gene08800:intron | 50.0% | |
| ! | AGTTGTCACCACGATGATGG+GGG | - | chr4.2:12984663-12984682 | MS.gene08800:intron | 50.0% |
| ! | CGGGTTAGGGCCAATTTGAT+AGG | - | chr4.2:12985592-12985611 | MS.gene08800:intron | 50.0% |
| ! | GATTCTCTCCGGTGCCAATT+TGG | - | chr4.2:12986774-12986793 | MS.gene08800:intron | 50.0% |
| ! | GATTTGGTTGCACACCTGGT+GGG | - | chr4.2:12985427-12985446 | MS.gene08800:intron | 50.0% |
| ! | GGTTGATATCCAGCCAGTTC+AGG | + | chr4.2:12988454-12988473 | None:intergenic | 50.0% |
| ! | TTGTGTCGGAGCTTAGCTCT+GGG | + | chr4.2:12985738-12985757 | None:intergenic | 50.0% |
| !! | ATAAGAAGCGTTGATCGGGG+TGG | - | chr4.2:12988774-12988793 | MS.gene08800:intron | 50.0% |
| !! | CAAGCATGGTGGTGGAAATG+GGG | - | chr4.2:12988481-12988500 | MS.gene08800:intron | 50.0% |
| !! | CATACATACTTTGGGGTGGC+TGG | - | chr4.2:12987512-12987531 | MS.gene08800:intron | 50.0% |
| !! | CCAAGTGTTGGAAGGTCACA+CGG | - | chr4.2:12986586-12986605 | MS.gene08800:intron | 50.0% |
| !! | CTCTCTCACTTTTACGCTGC+TGG | - | chr4.2:12988925-12988944 | MS.gene08800:CDS | 50.0% |
| !! | GCTGCTGTTTCAACAAAGGC+AGG | + | chr4.2:12986373-12986392 | None:intergenic | 50.0% |
| !! | GGGGGATTTGCTGGAAATGT+TGG | - | chr4.2:12984681-12984700 | MS.gene08800:intron | 50.0% |
| !! | GTGGTGTTGGCTTGAGATCT+TGG | - | chr4.2:12986722-12986741 | MS.gene08800:intron | 50.0% |
| AGACAGACCGGATGATGCTG+TGG | - | chr4.2:12987481-12987500 | MS.gene08800:intron | 55.0% | |
| CACCATGCGCTCTATCTCCA+TGG | + | chr4.2:12988210-12988229 | None:intergenic | 55.0% | |
| CAGCAAATCCCCCATCATCG+TGG | + | chr4.2:12984674-12984693 | None:intergenic | 55.0% | |
| CCCACCATGAGTAGCATACC+TGG | + | chr4.2:12987246-12987265 | None:intergenic | 55.0% | |
| CCGTGTGACCTTCCAACACT+TGG | + | chr4.2:12986589-12986608 | None:intergenic | 55.0% | |
| GATCTCAAGCCAACACCACC+AGG | + | chr4.2:12986721-12986740 | None:intergenic | 55.0% | |
| GCCAGGTATGCTACTCATGG+TGG | - | chr4.2:12987242-12987261 | MS.gene08800:intron | 55.0% | |
| GTTGTGTCGGAGCTTAGCTC+TGG | + | chr4.2:12985739-12985758 | None:intergenic | 55.0% | |
| TGCCATGGAGATAGAGCGCA+TGG | - | chr4.2:12988205-12988224 | MS.gene08800:CDS | 55.0% | |
| TTGGAGTGTGCTCCTCCTCA+AGG | - | chr4.2:12986741-12986760 | MS.gene08800:intron | 55.0% | |
| ! | GGATTTGGTTGCACACCTGG+TGG | - | chr4.2:12985426-12985445 | MS.gene08800:intron | 55.0% |
| ! | GGTGGATTTGGTTGCACACC+TGG | - | chr4.2:12985423-12985442 | MS.gene08800:intron | 55.0% |
| ! | TGTCGGCTAGTCATTCCGGT+AGG | + | chr4.2:12986660-12986679 | None:intergenic | 55.0% |
| ! | TGTGGGGGCCCTTGCTATAA+CGG | - | chr4.2:12987033-12987052 | MS.gene08800:intron | 55.0% |
| !! | ATTGGTAGGTGGGCTGCAGA+CGG | - | chr4.2:12986508-12986527 | MS.gene08800:CDS | 55.0% |
| !! | CACGATGATGGGGGATTTGC+TGG | - | chr4.2:12984672-12984691 | MS.gene08800:intron | 55.0% |
| !! | GAAGTGCTGTGTGCGGGTTA+GGG | - | chr4.2:12985579-12985598 | MS.gene08800:intron | 55.0% |
| !! | GGGTCTATCGGTTTCACTCC+AGG | + | chr4.2:12989115-12989134 | None:intergenic | 55.0% |
| !! | TGAAGTGCTGTGTGCGGGTT+AGG | - | chr4.2:12985578-12985597 | MS.gene08800:intron | 55.0% |
| ACCACCAGGCCAACCCACTT+GGG | + | chr4.2:12986707-12986726 | None:intergenic | 60.0% | |
| CCAGCATGAGATTCCCCACC+AGG | + | chr4.2:12985444-12985463 | None:intergenic | 60.0% | |
| CCTGGTGGGGAATCTCATGC+TGG | - | chr4.2:12985441-12985460 | MS.gene08800:intron | 60.0% | |
| ! | CTCTCCGGTGCCAATTTGGG+TGG | - | chr4.2:12986778-12986797 | MS.gene08800:intron | 60.0% |
| ! | GTGGGGGCCCTTGCTATAAC+GGG | - | chr4.2:12987034-12987053 | MS.gene08800:intron | 60.0% |
| ! | TGGGGGCCCTTGCTATAACG+GGG | - | chr4.2:12987035-12987054 | MS.gene08800:intron | 60.0% |
| !! | GTAACCCAAGTGGGTTGGCC+TGG | - | chr4.2:12986700-12986719 | MS.gene08800:intron | 60.0% |
| CACCACCAGGCCAACCCACT+TGG | + | chr4.2:12986708-12986727 | None:intergenic | 65.0% | |
| !! | ACCCAAGTGGGTTGGCCTGG+TGG | - | chr4.2:12986703-12986722 | MS.gene08800:intron | 65.0% |
| !! | GTGGGTTGGCCTGGTGGTGT+TGG | - | chr4.2:12986709-12986728 | MS.gene08800:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 12984389 | 12989186 | 12984389 | ID=MS.gene08800 |
| chr4.2 | mRNA | 12984389 | 12989186 | 12984389 | ID=MS.gene08800.t1;Parent=MS.gene08800 |
| chr4.2 | exon | 12989133 | 12989186 | 12989133 | ID=MS.gene08800.t1.exon1;Parent=MS.gene08800.t1 |
| chr4.2 | CDS | 12989133 | 12989186 | 12989133 | ID=cds.MS.gene08800.t1;Parent=MS.gene08800.t1 |
| chr4.2 | exon | 12988777 | 12989044 | 12988777 | ID=MS.gene08800.t1.exon2;Parent=MS.gene08800.t1 |
| chr4.2 | CDS | 12988777 | 12989044 | 12988777 | ID=cds.MS.gene08800.t1;Parent=MS.gene08800.t1 |
| chr4.2 | exon | 12988345 | 12988411 | 12988345 | ID=MS.gene08800.t1.exon3;Parent=MS.gene08800.t1 |
| chr4.2 | CDS | 12988345 | 12988411 | 12988345 | ID=cds.MS.gene08800.t1;Parent=MS.gene08800.t1 |
| chr4.2 | exon | 12988107 | 12988255 | 12988107 | ID=MS.gene08800.t1.exon4;Parent=MS.gene08800.t1 |
| chr4.2 | CDS | 12988107 | 12988255 | 12988107 | ID=cds.MS.gene08800.t1;Parent=MS.gene08800.t1 |
| chr4.2 | exon | 12986419 | 12986552 | 12986419 | ID=MS.gene08800.t1.exon5;Parent=MS.gene08800.t1 |
| chr4.2 | CDS | 12986419 | 12986552 | 12986419 | ID=cds.MS.gene08800.t1;Parent=MS.gene08800.t1 |
| chr4.2 | exon | 12986230 | 12986328 | 12986230 | ID=MS.gene08800.t1.exon6;Parent=MS.gene08800.t1 |
| chr4.2 | CDS | 12986230 | 12986328 | 12986230 | ID=cds.MS.gene08800.t1;Parent=MS.gene08800.t1 |
| chr4.2 | exon | 12986042 | 12986117 | 12986042 | ID=MS.gene08800.t1.exon7;Parent=MS.gene08800.t1 |
| chr4.2 | CDS | 12986042 | 12986117 | 12986042 | ID=cds.MS.gene08800.t1;Parent=MS.gene08800.t1 |
| chr4.2 | exon | 12984389 | 12984483 | 12984389 | ID=MS.gene08800.t1.exon8;Parent=MS.gene08800.t1 |
| chr4.2 | CDS | 12984389 | 12984483 | 12984389 | ID=cds.MS.gene08800.t1;Parent=MS.gene08800.t1 |
| Gene Sequence |
| Protein sequence |
