Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023504.t1 | XP_024629075.1 | 98.4 | 313 | 5 | 0 | 1 | 313 | 1 | 313 | 1.10E-102 | 383.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023504.t1 | Q84J75 | 87.5 | 313 | 39 | 0 | 1 | 313 | 9 | 321 | 4.3e-87 | 322.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023504.t1 | A0A396GUS6 | 98.4 | 313 | 5 | 0 | 1 | 313 | 1 | 313 | 8.0e-103 | 383.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023504 | MS.gene065113 | PPI |
| MS.gene029385 | MS.gene023504 | PPI |
| MS.gene023504 | MS.gene08800 | PPI |
| MS.gene71852 | MS.gene023504 | PPI |
| MS.gene013090 | MS.gene023504 | PPI |
| MS.gene09288 | MS.gene023504 | PPI |
| MS.gene023504 | MS.gene020444 | PPI |
| MS.gene76283 | MS.gene023504 | PPI |
| MS.gene023504 | MS.gene71852 | PPI |
| MS.gene023504 | MS.gene08956 | PPI |
| MS.gene37916 | MS.gene023504 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023504.t1 | MTR_1g111160 | 92.332 | 313 | 24 | 0 | 1 | 313 | 1 | 313 | 0.0 | 597 |
| MS.gene023504.t1 | MTR_1g111160 | 90.311 | 289 | 28 | 0 | 1 | 289 | 1 | 289 | 0.0 | 538 |
| MS.gene023504.t1 | MTR_1g111160 | 91.829 | 257 | 21 | 0 | 1 | 257 | 1 | 257 | 6.16e-176 | 487 |
| MS.gene023504.t1 | MTR_1g111160 | 27.500 | 160 | 116 | 0 | 103 | 262 | 7 | 166 | 5.95e-16 | 76.6 |
| MS.gene023504.t1 | MTR_1g111160 | 88.889 | 252 | 28 | 0 | 1 | 252 | 1 | 252 | 5.85e-166 | 461 |
| MS.gene023504.t1 | MTR_1g111160 | 27.500 | 160 | 116 | 0 | 103 | 262 | 7 | 166 | 6.92e-16 | 76.3 |
| MS.gene023504.t1 | MTR_7g024540 | 31.410 | 312 | 174 | 7 | 21 | 295 | 33 | 341 | 8.58e-42 | 148 |
| MS.gene023504.t1 | MTR_6g007165 | 30.657 | 274 | 179 | 4 | 1 | 270 | 44 | 310 | 1.12e-34 | 131 |
| MS.gene023504.t1 | MTR_8g085230 | 94.286 | 35 | 2 | 0 | 279 | 313 | 24 | 58 | 1.01e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023504.t1 | AT5G12210 | 80.511 | 313 | 61 | 0 | 1 | 313 | 9 | 321 | 0.0 | 523 |
| MS.gene023504.t1 | AT3G12070 | 79.299 | 314 | 62 | 2 | 3 | 313 | 4 | 317 | 0.0 | 521 |
| MS.gene023504.t1 | AT3G12070 | 79.299 | 314 | 62 | 2 | 3 | 313 | 4 | 317 | 0.0 | 521 |
| MS.gene023504.t1 | AT3G12070 | 79.299 | 314 | 62 | 2 | 3 | 313 | 4 | 317 | 0.0 | 521 |
| MS.gene023504.t1 | AT5G12210 | 80.192 | 313 | 61 | 1 | 1 | 313 | 9 | 320 | 0.0 | 516 |
| MS.gene023504.t1 | AT3G12070 | 77.876 | 226 | 47 | 2 | 3 | 225 | 4 | 229 | 3.49e-129 | 368 |
| MS.gene023504.t1 | AT2G39550 | 32.362 | 309 | 171 | 6 | 32 | 303 | 62 | 369 | 3.83e-43 | 152 |
| MS.gene023504.t1 | AT5G40280 | 32.864 | 213 | 133 | 4 | 37 | 242 | 113 | 322 | 3.13e-24 | 102 |
| MS.gene023504.t1 | AT5G40280 | 30.120 | 166 | 111 | 2 | 82 | 242 | 189 | 354 | 2.31e-20 | 91.7 |
Find 68 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGCCTGATCATGATTGAT+AGG | 0.270530 | 4.3:-15420424 | MS.gene023504:CDS |
| ATGTCTATCATACATACTTT+GGG | 0.346369 | 4.3:-15420192 | MS.gene023504:CDS |
| GAAGCTTATAAAGTTTATCT+TGG | 0.359856 | 4.3:-15420381 | MS.gene023504:CDS |
| GGTGGATTTGGTTGCACACC+TGG | 0.360124 | 4.3:-15422271 | MS.gene023504:CDS |
| CTCACATCAGGGAGTTTCTC+TGG | 0.361859 | 4.3:+15420557 | None:intergenic |
| TCAGGATGAATGGAGCATAC+TGG | 0.362998 | 4.3:-15423123 | MS.gene023504:CDS |
| AACTGTTAGGACACAGAAAA+TGG | 0.374598 | 4.3:-15420247 | MS.gene023504:intron |
| CTTGTTGACAAGGACTTACT+TGG | 0.380516 | 4.3:-15420629 | MS.gene023504:CDS |
| GATGTCTATCATACATACTT+TGG | 0.407924 | 4.3:-15420193 | MS.gene023504:CDS |
| TCATCTTATTGATGTTGATA+AGG | 0.414501 | 4.3:-15422924 | MS.gene023504:CDS |
| CAGGATGAATGGAGCATACT+GGG | 0.420427 | 4.3:-15423122 | MS.gene023504:CDS |
| CTTTCACTTCTTGAATATCC+TGG | 0.427177 | 4.3:-15418602 | MS.gene023504:CDS |
| CCAAGCGACGTAATATTGAT+AGG | 0.429921 | 4.3:+15422350 | None:intergenic |
| TTAACTGCCCTTGATCTTCT+CGG | 0.431904 | 4.3:-15423097 | MS.gene023504:CDS |
| TGTGAGCGACAAGTTAAATC+TGG | 0.432622 | 4.3:-15420596 | MS.gene023504:CDS |
| ATCAGTTGTCACCACGATGA+TGG | 0.437364 | 4.3:-15423031 | MS.gene023504:CDS |
| TACCCGTAGACGTTGTCAAT+CGG | 0.440295 | 4.3:-15418550 | MS.gene023504:CDS |
| ATGTTGATGAGGTTGTTTCA+TGG | 0.447603 | 4.3:-15423057 | MS.gene023504:CDS |
| AAAGTTTATCTTGGACTGCC+AGG | 0.456260 | 4.3:-15420372 | MS.gene023504:intron |
| CATACATACTTTGGGGTGGC+TGG | 0.466568 | 4.3:-15420184 | MS.gene023504:intron |
| AATCCGATTGACAACGTCTA+CGG | 0.470884 | 4.3:+15418547 | None:intergenic |
| TCAGTTGTCACCACGATGAT+GGG | 0.473093 | 4.3:-15423030 | MS.gene023504:CDS |
| CTGTGGTAATGGAACATCTC+AGG | 0.476418 | 4.3:-15423141 | MS.gene023504:CDS |
| GTTAAATCTGGAGGTCTGAA+TGG | 0.477849 | 4.3:-15420584 | MS.gene023504:CDS |
| ATCCGATTGACAACGTCTAC+GGG | 0.478203 | 4.3:+15418548 | None:intergenic |
| GTTAGCCTGCAAAATGAAGA+TGG | 0.479793 | 4.3:-15422525 | MS.gene023504:CDS |
| GGGTCTATCGGTTTCACTCC+AGG | 0.481923 | 4.3:+15418584 | None:intergenic |
| CCTATCAATATTACGTCGCT+TGG | 0.484014 | 4.3:-15422350 | MS.gene023504:CDS |
| GAACCCTATCAATCATGATC+AGG | 0.489404 | 4.3:+15420420 | None:intergenic |
| ATGGAACATCTCAGGATGAA+TGG | 0.497514 | 4.3:-15423133 | MS.gene023504:CDS |
| TAGCCTGATCATGATTGATA+GGG | 0.498142 | 4.3:-15420423 | MS.gene023504:CDS |
| GATTTGGTTGCACACCTGGT+GGG | 0.498689 | 4.3:-15422267 | MS.gene023504:CDS |
| ATTTGGTTGCACACCTGGTG+GGG | 0.500235 | 4.3:-15422266 | MS.gene023504:CDS |
| CCAGCATGAGATTCCCCACC+AGG | 0.510818 | 4.3:+15422253 | None:intergenic |
| ATATATACTATCAGTTGAAA+AGG | 0.512188 | 4.3:-15423269 | MS.gene023504:intron |
| ACAAGGACTTACTTGGTTGG+TGG | 0.520652 | 4.3:-15420622 | MS.gene023504:CDS |
| GGATTTGGTTGCACACCTGG+TGG | 0.522911 | 4.3:-15422268 | MS.gene023504:CDS |
| TTGACAAGGACTTACTTGGT+TGG | 0.525370 | 4.3:-15420625 | MS.gene023504:CDS |
| GCCAGGTATGCTACTCATGG+TGG | 0.535317 | 4.3:-15420454 | MS.gene023504:intron |
| TCATGATTGATAGGGTTCAC+TGG | 0.538238 | 4.3:-15420415 | MS.gene023504:CDS |
| AAAGCATAAGCCGGGTCTAT+CGG | 0.539627 | 4.3:+15418572 | None:intergenic |
| TAGACATCCACAGCATCATC+CGG | 0.549532 | 4.3:+15420208 | None:intergenic |
| CCAGGTATGCTACTCATGGT+GGG | 0.555106 | 4.3:-15420453 | MS.gene023504:intron |
| GGATAGAATAAATGTGGAGA+AGG | 0.559748 | 4.3:-15422329 | MS.gene023504:CDS |
| TGGTGGAATTTCAGACAGAC+CGG | 0.576594 | 4.3:-15420227 | MS.gene023504:CDS |
| CTTGCCAGGTATGCTACTCA+TGG | 0.581436 | 4.3:-15420457 | MS.gene023504:intron |
| CCTGGTGGGGAATCTCATGC+TGG | 0.582123 | 4.3:-15422253 | MS.gene023504:CDS |
| AACAACCTCATCAACATCTA+CGG | 0.586257 | 4.3:+15423063 | None:intergenic |
| TCTACGGGTAAAGCATAAGC+CGG | 0.595209 | 4.3:+15418563 | None:intergenic |
| CAGTTGTCACCACGATGATG+GGG | 0.596464 | 4.3:-15423029 | MS.gene023504:CDS |
| TAGGGTTCACTGGATCAGTA+AGG | 0.600098 | 4.3:-15420405 | MS.gene023504:CDS |
| TTAGCCTGCAAAATGAAGAT+GGG | 0.605987 | 4.3:-15422524 | MS.gene023504:CDS |
| CTAGTGACCCCGTTATAGCA+AGG | 0.608314 | 4.3:+15420654 | None:intergenic |
| TCGCTTGGATAGAATAAATG+TGG | 0.614658 | 4.3:-15422335 | MS.gene023504:CDS |
| GTCACTAGATCTTGTTGACA+AGG | 0.624947 | 4.3:-15420639 | MS.gene023504:CDS |
| TAGTGACCCCGTTATAGCAA+GGG | 0.631959 | 4.3:+15420655 | None:intergenic |
| CTACGGGTAAAGCATAAGCC+GGG | 0.632140 | 4.3:+15418564 | None:intergenic |
| CTATCATACATACTTTGGGG+TGG | 0.633143 | 4.3:-15420188 | MS.gene023504:CDS |
| AGACAGACCGGATGATGCTG+TGG | 0.645799 | 4.3:-15420215 | MS.gene023504:CDS |
| TGGAGTGAAACCGATAGACC+CGG | 0.648295 | 4.3:-15418582 | MS.gene023504:CDS |
| TGTTAGGACACAGAAAATGG+TGG | 0.653329 | 4.3:-15420244 | MS.gene023504:intron |
| TGTCTATCATACATACTTTG+GGG | 0.654532 | 4.3:-15420191 | MS.gene023504:CDS |
| CGACACCGTAGATGTTGATG+AGG | 0.660761 | 4.3:-15423068 | MS.gene023504:CDS |
| CTGAGTGTATACAAAATGTG+TGG | 0.673916 | 4.3:+15422980 | None:intergenic |
| AGTTGTCACCACGATGATGG+GGG | 0.678776 | 4.3:-15423028 | MS.gene023504:CDS |
| TATGGGGTGAAGTTGATACC+CGG | 0.685066 | 4.3:-15422485 | MS.gene023504:intron |
| AGGATGAATGGAGCATACTG+GGG | 0.699697 | 4.3:-15423121 | MS.gene023504:CDS |
| GAGCGACAAGTTAAATCTGG+AGG | 0.710603 | 4.3:-15420593 | MS.gene023504:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATGTTAAATTGAATTT+GGG | + | chr4.3:15423108-15423127 | None:intergenic | 10.0% |
| !!! | ATTTTTTTATTAGAAGAATT+GGG | - | chr4.3:15421988-15422007 | MS.gene023504:intron | 10.0% |
| !!! | TATATTCAAATATCTTTTAA+TGG | + | chr4.3:15422989-15423008 | None:intergenic | 10.0% |
| !!! | TATTTTTTTATTAGAAGAAT+TGG | - | chr4.3:15421987-15422006 | MS.gene023504:intron | 10.0% |
| !! | AACAAAAAAAATCATTAAAG+AGG | - | chr4.3:15420455-15420474 | MS.gene023504:intron | 15.0% |
| !! | AATTCAATTTAACATATAAC+AGG | - | chr4.3:15423109-15423128 | MS.gene023504:CDS | 15.0% |
| !! | ATAACATTCAATATGAAATT+AGG | + | chr4.3:15421970-15421989 | None:intergenic | 15.0% |
| !! | ATTAAAAATGAAACATAGTT+GGG | + | chr4.3:15418616-15418635 | None:intergenic | 15.0% |
| !! | GTTATATGTTAAATTGAATT+TGG | + | chr4.3:15423109-15423128 | None:intergenic | 15.0% |
| !! | GTTGTAAAAATAGTATAATA+TGG | - | chr4.3:15422210-15422229 | MS.gene023504:intron | 15.0% |
| !! | TATTAAAAATGAAACATAGT+TGG | + | chr4.3:15418617-15418636 | None:intergenic | 15.0% |
| !!! | AGAGATAATATTTTTTATGT+TGG | + | chr4.3:15419926-15419945 | None:intergenic | 15.0% |
| !!! | ATAAAACTTGTTAATACATA+AGG | + | chr4.3:15419197-15419216 | None:intergenic | 15.0% |
| !!! | ATAGTCTTTTTTATGTAAAT+TGG | - | chr4.3:15420106-15420125 | MS.gene023504:intron | 15.0% |
| !!! | CTATTTAGTTTTTAATTGTT+TGG | - | chr4.3:15422180-15422199 | MS.gene023504:intron | 15.0% |
| !!! | TTTTTTTATTAGAAGAATTG+GGG | - | chr4.3:15421989-15422008 | MS.gene023504:intron | 15.0% |
| !! | AATAGAGAAAATATACTTTC+TGG | + | chr4.3:15420062-15420081 | None:intergenic | 20.0% |
| !! | AGAATAGATGAAATACAAAA+AGG | + | chr4.3:15421686-15421705 | None:intergenic | 20.0% |
| !! | ATATATACTATCAGTTGAAA+AGG | - | chr4.3:15418564-15418583 | MS.gene023504:CDS | 20.0% |
| !! | ATGGCAAATATTAATATTGT+CGG | + | chr4.3:15420814-15420833 | None:intergenic | 20.0% |
| !! | CATTTAGATTATATTGATGT+CGG | - | chr4.3:15421762-15421781 | MS.gene023504:intron | 20.0% |
| !! | CTTATAAGATTAATAATGAG+TGG | - | chr4.3:15420328-15420347 | MS.gene023504:intron | 20.0% |
| !! | GAATAGATGAAATACAAAAA+GGG | + | chr4.3:15421685-15421704 | None:intergenic | 20.0% |
| !! | TAAAAAAGACTATGTTATAG+AGG | + | chr4.3:15420099-15420118 | None:intergenic | 20.0% |
| !!! | AGTTATATGATAATGAATGT+CGG | - | chr4.3:15422719-15422738 | MS.gene023504:intron | 20.0% |
| !!! | ATGTATTAACAAGTTTTATG+TGG | - | chr4.3:15419198-15419217 | MS.gene023504:intron | 20.0% |
| !!! | ATTGTTCCTTATTTGATTTT+GGG | + | chr4.3:15419761-15419780 | None:intergenic | 20.0% |
| !!! | CTTTTTTATGTAAATTGGAT+TGG | - | chr4.3:15420111-15420130 | MS.gene023504:intron | 20.0% |
| !!! | GAAAAAAACTCTTTTTTGAT+GGG | - | chr4.3:15420365-15420384 | MS.gene023504:intron | 20.0% |
| !!! | GCATTTAATTTTAGATCATT+TGG | - | chr4.3:15422018-15422037 | MS.gene023504:intron | 20.0% |
| !!! | TATTGTTCCTTATTTGATTT+TGG | + | chr4.3:15419762-15419781 | None:intergenic | 20.0% |
| !!! | TGAAAAAAACTCTTTTTTGA+TGG | - | chr4.3:15420364-15420383 | MS.gene023504:intron | 20.0% |
| !!! | TGTATTAACAAGTTTTATGT+GGG | - | chr4.3:15419199-15419218 | MS.gene023504:intron | 20.0% |
| !!! | TTTATTTGGAATTCAGAAAA+TGG | + | chr4.3:15421079-15421098 | None:intergenic | 20.0% |
| ! | AAAAATAAGCCAATCTTTAC+CGG | - | chr4.3:15419171-15419190 | MS.gene023504:intron | 25.0% |
| ! | AAAAATATGCCAATTCAAAC+AGG | + | chr4.3:15418994-15419013 | None:intergenic | 25.0% |
| ! | AAAAATTCCACTAAATAACC+TGG | + | chr4.3:15421482-15421501 | None:intergenic | 25.0% |
| ! | ACATAAGTAATTGTATTGTC+AGG | + | chr4.3:15423169-15423188 | None:intergenic | 25.0% |
| ! | ATGTCTATCATACATACTTT+GGG | - | chr4.3:15421641-15421660 | MS.gene023504:intron | 25.0% |
| ! | ATTCATTATCATATAACTGC+AGG | + | chr4.3:15422717-15422736 | None:intergenic | 25.0% |
| ! | ATTTCAAGAGATAGACAAAA+AGG | - | chr4.3:15421825-15421844 | MS.gene023504:intron | 25.0% |
| ! | CATTGCATATTAAAATGACT+AGG | + | chr4.3:15420024-15420043 | None:intergenic | 25.0% |
| ! | GAAAACAAGAAATCTTCAAA+AGG | + | chr4.3:15419685-15419704 | None:intergenic | 25.0% |
| ! | GAAGCTTATAAAGTTTATCT+TGG | - | chr4.3:15421452-15421471 | MS.gene023504:intron | 25.0% |
| ! | GAGAAACAAAGAAAAACAAT+AGG | - | chr4.3:15422958-15422977 | MS.gene023504:CDS | 25.0% |
| ! | TAATCACTCAAAGATCAAAA+TGG | + | chr4.3:15419389-15419408 | None:intergenic | 25.0% |
| ! | TCATCTTATTGATGTTGATA+AGG | - | chr4.3:15418909-15418928 | MS.gene023504:intron | 25.0% |
| ! | TCTCAAAAGGTTAAACTATT+AGG | - | chr4.3:15422077-15422096 | MS.gene023504:intron | 25.0% |
| ! | TTATCTATGTTGAAACTGTT+AGG | - | chr4.3:15421573-15421592 | MS.gene023504:intron | 25.0% |
| ! | TTGTCTATCTCTTGAAATTA+TGG | + | chr4.3:15421823-15421842 | None:intergenic | 25.0% |
| ! | TTTCTGTGTAAATTATAACG+TGG | + | chr4.3:15422296-15422315 | None:intergenic | 25.0% |
| !! | ACTCATTGCATTCTTTTATT+TGG | + | chr4.3:15421093-15421112 | None:intergenic | 25.0% |
| !! | GTTATATGATAATGAATGTC+GGG | - | chr4.3:15422720-15422739 | MS.gene023504:intron | 25.0% |
| !! | TCAAATATCTTTTAATGGTC+AGG | + | chr4.3:15422984-15423003 | None:intergenic | 25.0% |
| !! | TTTTATTCATAAGCTTCTCA+AGG | - | chr4.3:15419057-15419076 | MS.gene023504:intron | 25.0% |
| !!! | GAGAAAATCTTTTCAAGTTT+AGG | - | chr4.3:15421296-15421315 | MS.gene023504:intron | 25.0% |
| !!! | TTGTTCCTTATTTGATTTTG+GGG | + | chr4.3:15419760-15419779 | None:intergenic | 25.0% |
| AAACTATCTTTCTTCTGCAA+AGG | + | chr4.3:15418667-15418686 | None:intergenic | 30.0% | |
| AAAGAGGAAATCATTGCTAA+TGG | - | chr4.3:15420471-15420490 | MS.gene023504:intron | 30.0% | |
| AACCACCTATAAACTCATAA+GGG | + | chr4.3:15422447-15422466 | None:intergenic | 30.0% | |
| AAGAGGAAATCATTGCTAAT+GGG | - | chr4.3:15420472-15420491 | MS.gene023504:intron | 30.0% | |
| AGTAATTGTATTGTCAGGAA+AGG | + | chr4.3:15423164-15423183 | None:intergenic | 30.0% | |
| ATGGAGCTTAAGAAAAATAC+CGG | + | chr4.3:15419370-15419389 | None:intergenic | 30.0% | |
| CATTATAAGCTGCAAAAACA+TGG | - | chr4.3:15419537-15419556 | MS.gene023504:intron | 30.0% | |
| GATGTCTATCATACATACTT+TGG | - | chr4.3:15421640-15421659 | MS.gene023504:intron | 30.0% | |
| GTAGTCACATAAAACAAGAT+AGG | - | chr4.3:15422804-15422823 | MS.gene023504:intron | 30.0% | |
| TATAGTCCAAAAATGCAGTA+AGG | + | chr4.3:15419415-15419434 | None:intergenic | 30.0% | |
| TGGAATAGTTCAAACGTTAA+AGG | - | chr4.3:15422931-15422950 | MS.gene023504:CDS | 30.0% | |
| TGTCTATCATACATACTTTG+GGG | - | chr4.3:15421642-15421661 | MS.gene023504:intron | 30.0% | |
| TTTAGATCATTTGGTCATAG+AGG | - | chr4.3:15422027-15422046 | MS.gene023504:intron | 30.0% | |
| ! | GAAAAGATTTTCTCACATCA+GGG | + | chr4.3:15421290-15421309 | None:intergenic | 30.0% |
| ! | TGAAAAGATTTTCTCACATC+AGG | + | chr4.3:15421291-15421310 | None:intergenic | 30.0% |
| !! | AACTTGTTAATACATAAGGC+CGG | + | chr4.3:15419193-15419212 | None:intergenic | 30.0% |
| !! | ATTTTTCAACAAGCACTAAC+GGG | + | chr4.3:15422565-15422584 | None:intergenic | 30.0% |
| !! | GATTTTTCAACAAGCACTAA+CGG | + | chr4.3:15422566-15422585 | None:intergenic | 30.0% |
| !! | TTAACAAGTTTTATGTGGGT+CGG | - | chr4.3:15419203-15419222 | MS.gene023504:intron | 30.0% |
| !!! | ATGGTCTTATTGTTTTTCTC+AGG | - | chr4.3:15421332-15421351 | MS.gene023504:intron | 30.0% |
| !!! | CATGTTTTTTTCGTCTTTTG+TGG | - | chr4.3:15421514-15421533 | MS.gene023504:intron | 30.0% |
| !!! | GAAAGATAGTTTTGAATCTG+TGG | - | chr4.3:15418675-15418694 | MS.gene023504:intron | 30.0% |
| !!! | GTTGTTTTATTTGTTGTTGC+AGG | - | chr4.3:15423207-15423226 | MS.gene023504:intron | 30.0% |
| !!! | GTTTAACCTTTTGAGATACT+TGG | + | chr4.3:15422073-15422092 | None:intergenic | 30.0% |
| !!! | TAGTTTTGAATCTGTGGTAA+TGG | - | chr4.3:15418681-15418700 | MS.gene023504:intron | 30.0% |
| AACAACCTCATCAACATCTA+CGG | + | chr4.3:15418773-15418792 | None:intergenic | 35.0% | |
| AACCTAAGATAACAAGTCGA+TGG | + | chr4.3:15419442-15419461 | None:intergenic | 35.0% | |
| AACTGTTAGGACACAGAAAA+TGG | - | chr4.3:15421586-15421605 | MS.gene023504:intron | 35.0% | |
| ACAGTCCCTTATGAGTTTAT+AGG | - | chr4.3:15422439-15422458 | MS.gene023504:intron | 35.0% | |
| ACTATGAGAAATTGGTAGGT+GGG | - | chr4.3:15420635-15420654 | MS.gene023504:CDS | 35.0% | |
| AGAAAGTAATCACACTGTTG+CGG | - | chr4.3:15422757-15422776 | MS.gene023504:intron | 35.0% | |
| AGAAATGTTAGCGAGAAAGT+TGG | - | chr4.3:15422836-15422855 | MS.gene023504:intron | 35.0% | |
| AGAACATACAATAGCAGTAG+AGG | - | chr4.3:15419837-15419856 | MS.gene023504:intron | 35.0% | |
| AGACAACCATTTGGATTGAA+GGG | - | chr4.3:15420399-15420418 | MS.gene023504:CDS | 35.0% | |
| AGGAACCCCAAAATCAAATA+AGG | - | chr4.3:15419752-15419771 | MS.gene023504:intron | 35.0% | |
| ATAAGCTGCAAAAACATGGA+TGG | - | chr4.3:15419541-15419560 | MS.gene023504:intron | 35.0% | |
| ATACTTTCTCTGAGTTGTGT+CGG | + | chr4.3:15419891-15419910 | None:intergenic | 35.0% | |
| ATGCCATAATTCTAAGCTTG+TGG | - | chr4.3:15421915-15421934 | MS.gene023504:intron | 35.0% | |
| CACAGCAGAAAACTGAAAAT+AGG | + | chr4.3:15421152-15421171 | None:intergenic | 35.0% | |
| CTGAGTGTATACAAAATGTG+TGG | + | chr4.3:15418856-15418875 | None:intergenic | 35.0% | |
| CTTTCACTTCTTGAATATCC+TGG | - | chr4.3:15423231-15423250 | MS.gene023504:intron | 35.0% | |
| GAACCACCTATAAACTCATA+AGG | + | chr4.3:15422448-15422467 | None:intergenic | 35.0% | |
| GAAGACTATGAGAAATTGGT+AGG | - | chr4.3:15420631-15420650 | MS.gene023504:CDS | 35.0% | |
| GATGCAATTGCAAGCTTATA+TGG | + | chr4.3:15420224-15420243 | None:intergenic | 35.0% | |
| GGATAGAATAAATGTGGAGA+AGG | - | chr4.3:15419504-15419523 | MS.gene023504:intron | 35.0% | |
| GTTGAAAAATCTACCTGAAC+TGG | - | chr4.3:15422575-15422594 | MS.gene023504:intron | 35.0% | |
| TAAATAGAACGACATGCATC+TGG | + | chr4.3:15422167-15422186 | None:intergenic | 35.0% | |
| TAAATGCATGAGAAAGAGAG+AGG | + | chr4.3:15421748-15421767 | None:intergenic | 35.0% | |
| TAGCCTGATCATGATTGATA+GGG | - | chr4.3:15421410-15421429 | MS.gene023504:intron | 35.0% | |
| TATGAGTTTATAGGTGGTTC+TGG | - | chr4.3:15422448-15422467 | MS.gene023504:intron | 35.0% | |
| TCGCTTGGATAGAATAAATG+TGG | - | chr4.3:15419498-15419517 | MS.gene023504:intron | 35.0% | |
| TCTAGCGTAAGGTTGAAAAT+TGG | - | chr4.3:15422262-15422281 | MS.gene023504:CDS | 35.0% | |
| TCTCTTGAAATTATGGCCAA+AGG | + | chr4.3:15421816-15421835 | None:intergenic | 35.0% | |
| TCTGTTGAAACTTGAAAGGT+GGG | + | chr4.3:15420296-15420315 | None:intergenic | 35.0% | |
| TGCCATAATTCTAAGCTTGT+GGG | - | chr4.3:15421916-15421935 | MS.gene023504:intron | 35.0% | |
| TGGACTAAACTACTACTTTG+AGG | + | chr4.3:15420204-15420223 | None:intergenic | 35.0% | |
| TGGAGCTTAAGAAAAATACC+GGG | + | chr4.3:15419369-15419388 | None:intergenic | 35.0% | |
| TGTCTCTGTTGAAACTTGAA+AGG | + | chr4.3:15420300-15420319 | None:intergenic | 35.0% | |
| TTAGCCTGCAAAATGAAGAT+GGG | - | chr4.3:15419309-15419328 | MS.gene023504:intron | 35.0% | |
| TTCTCAATAGAGAGCTGTAT+TGG | - | chr4.3:15422401-15422420 | MS.gene023504:intron | 35.0% | |
| ! | AATGAAGATGGGTCTTTTTC+AGG | - | chr4.3:15419320-15419339 | MS.gene023504:intron | 35.0% |
| ! | ATGTTGATGAGGTTGTTTCA+TGG | - | chr4.3:15418776-15418795 | MS.gene023504:intron | 35.0% |
| ! | ATTTTCAGTTTTCTGCTGTG+TGG | - | chr4.3:15421152-15421171 | MS.gene023504:intron | 35.0% |
| ! | TTACCACCTTACTGCATTTT+TGG | - | chr4.3:15419406-15419425 | MS.gene023504:intron | 35.0% |
| ! | TTCAAGTTTAGGTTCATTGC+TGG | - | chr4.3:15421307-15421326 | MS.gene023504:intron | 35.0% |
| ! | TTTTCAGTTTTCTGCTGTGT+GGG | - | chr4.3:15421153-15421172 | MS.gene023504:intron | 35.0% |
| !! | AAAAACATGGATGGTGGATT+TGG | - | chr4.3:15419550-15419569 | MS.gene023504:intron | 35.0% |
| !! | ATCCATCGACTTGTTATCTT+AGG | - | chr4.3:15419437-15419456 | MS.gene023504:intron | 35.0% |
| !! | ATGAAGATGGGTCTTTTTCA+GGG | - | chr4.3:15419321-15419340 | MS.gene023504:intron | 35.0% |
| !! | GTTCTGAAGGCAACAATTAA+TGG | - | chr4.3:15420687-15420706 | MS.gene023504:intron | 35.0% |
| !! | TTACACAGAAAGTGCTACAT+GGG | - | chr4.3:15422305-15422324 | MS.gene023504:CDS | 35.0% |
| !! | TTTACACAGAAAGTGCTACA+TGG | - | chr4.3:15422304-15422323 | MS.gene023504:CDS | 35.0% |
| !! | TTTTCAAGAAGATGAGGTGA+GGG | - | chr4.3:15420609-15420628 | MS.gene023504:CDS | 35.0% |
| !!! | GTCTTTTTCAGGGGATATAT+GGG | - | chr4.3:15419331-15419350 | MS.gene023504:intron | 35.0% |
| !!! | GTGTCTTTTTCAAGAAGATG+AGG | - | chr4.3:15420603-15420622 | MS.gene023504:CDS | 35.0% |
| !!! | TCTTTTTCAGGGGATATATG+GGG | - | chr4.3:15419332-15419351 | MS.gene023504:intron | 35.0% |
| !!! | TTTTGGGGTTCCTATCAAAT+TGG | + | chr4.3:15419745-15419764 | None:intergenic | 35.0% |
| !!! | TTTTTCAAGAAGATGAGGTG+AGG | - | chr4.3:15420608-15420627 | MS.gene023504:CDS | 35.0% |
| AAAAATCTACCTGAACTGGC+TGG | - | chr4.3:15422579-15422598 | MS.gene023504:intron | 40.0% | |
| AAAGTTTATCTTGGACTGCC+AGG | - | chr4.3:15421461-15421480 | MS.gene023504:intron | 40.0% | |
| AACTGCAGGATTTGTAGTTG+TGG | + | chr4.3:15422703-15422722 | None:intergenic | 40.0% | |
| AATCCGATTGACAACGTCTA+CGG | + | chr4.3:15423289-15423308 | None:intergenic | 40.0% | |
| ACCTGGCAAGATCTAAAAAC+TGG | + | chr4.3:15421366-15421385 | None:intergenic | 40.0% | |
| AGGAAAAGCAATGCTTCACA+AGG | + | chr4.3:15421132-15421151 | None:intergenic | 40.0% | |
| AGTCCAAAAATGCAGTAAGG+TGG | + | chr4.3:15419412-15419431 | None:intergenic | 40.0% | |
| ATCAACCATAGGTTCAAGCA+TGG | - | chr4.3:15422604-15422623 | MS.gene023504:intron | 40.0% | |
| ATGGAACATCTCAGGATGAA+TGG | - | chr4.3:15418700-15418719 | MS.gene023504:intron | 40.0% | |
| ATGTTGTAACCCATTTGGGT+TGG | - | chr4.3:15420832-15420851 | MS.gene023504:intron | 40.0% | |
| ATTGTCAGGAAAGGATAGAC+AGG | + | chr4.3:15423155-15423174 | None:intergenic | 40.0% | |
| CACAAACCAAAACATGAAGC+AGG | + | chr4.3:15421883-15421902 | None:intergenic | 40.0% | |
| CCAAGCGACGTAATATTGAT+AGG | + | chr4.3:15419486-15419505 | None:intergenic | 40.0% | |
| CCTATCAATATTACGTCGCT+TGG | - | chr4.3:15419483-15419502 | MS.gene023504:intron | 40.0% | |
| CGGAAATGACAATGCTATGA+TGG | - | chr4.3:15422777-15422796 | MS.gene023504:intron | 40.0% | |
| CGTGAACCAAGTATCTCAAA+AGG | - | chr4.3:15422064-15422083 | MS.gene023504:intron | 40.0% | |
| CTAAACTAGACCACCCAAAT+TGG | + | chr4.3:15420928-15420947 | None:intergenic | 40.0% | |
| CTAAAGTGTGGACAATGCAT+AGG | - | chr4.3:15421940-15421959 | MS.gene023504:intron | 40.0% | |
| CTAGCCTGATCATGATTGAT+AGG | - | chr4.3:15421409-15421428 | MS.gene023504:intron | 40.0% | |
| CTATGCATTGTCCACACTTT+AGG | + | chr4.3:15421942-15421961 | None:intergenic | 40.0% | |
| CTCCATGGCATTTGTATGAT+TGG | + | chr4.3:15422332-15422351 | None:intergenic | 40.0% | |
| CTCTGTTGAAACTTGAAAGG+TGG | + | chr4.3:15420297-15420316 | None:intergenic | 40.0% | |
| CTTGTTGACAAGGACTTACT+TGG | - | chr4.3:15421204-15421223 | MS.gene023504:intron | 40.0% | |
| CTTTCTGGACATATTGTTGC+TGG | + | chr4.3:15420047-15420066 | None:intergenic | 40.0% | |
| GAACACATTGAATGAAGCAG+TGG | - | chr4.3:15420755-15420774 | MS.gene023504:intron | 40.0% | |
| GAACCCTATCAATCATGATC+AGG | + | chr4.3:15421416-15421435 | None:intergenic | 40.0% | |
| GAATCAAACATGAGACCTTG+AGG | + | chr4.3:15420896-15420915 | None:intergenic | 40.0% | |
| GACACTGAAATTCTAGCGTA+AGG | - | chr4.3:15422251-15422270 | MS.gene023504:CDS | 40.0% | |
| GACTATGAGAAATTGGTAGG+TGG | - | chr4.3:15420634-15420653 | MS.gene023504:CDS | 40.0% | |
| GAGACAACCATTTGGATTGA+AGG | - | chr4.3:15420398-15420417 | MS.gene023504:CDS | 40.0% | |
| GAGGGAAGACTATGAGAAAT+TGG | - | chr4.3:15420627-15420646 | MS.gene023504:CDS | 40.0% | |
| GCAGTCAATACAACACAACA+TGG | + | chr4.3:15420972-15420991 | None:intergenic | 40.0% | |
| GCATTCTTCATGAAACCTAG+TGG | - | chr4.3:15421847-15421866 | MS.gene023504:intron | 40.0% | |
| GTCACTAGATCTTGTTGACA+AGG | - | chr4.3:15421194-15421213 | MS.gene023504:intron | 40.0% | |
| GTCCCTTATGAGTTTATAGG+TGG | - | chr4.3:15422442-15422461 | MS.gene023504:intron | 40.0% | |
| GTCTCATGTTTGATTCTCTC+CGG | - | chr4.3:15420900-15420919 | MS.gene023504:intron | 40.0% | |
| GTTAAATCTGGAGGTCTGAA+TGG | - | chr4.3:15421249-15421268 | MS.gene023504:intron | 40.0% | |
| TACATAAGGCCGGTAAAGAT+TGG | + | chr4.3:15419183-15419202 | None:intergenic | 40.0% | |
| TAGCCAAGTGATGACTAACA+AGG | - | chr4.3:15420542-15420561 | MS.gene023504:intron | 40.0% | |
| TCATGATTGATAGGGTTCAC+TGG | - | chr4.3:15421418-15421437 | MS.gene023504:intron | 40.0% | |
| TCATTTGGTCATAGAGGCTT+TGG | - | chr4.3:15422033-15422052 | MS.gene023504:intron | 40.0% | |
| TGAGCTATAGATCCAAGTGT+TGG | - | chr4.3:15420711-15420730 | MS.gene023504:intron | 40.0% | |
| TGAGTTCCCTTCAATCCAAA+TGG | + | chr4.3:15420408-15420427 | None:intergenic | 40.0% | |
| TGCCATGTTGTAACCCATTT+GGG | - | chr4.3:15420828-15420847 | MS.gene023504:intron | 40.0% | |
| TGTGAGCGACAAGTTAAATC+TGG | - | chr4.3:15421237-15421256 | MS.gene023504:intron | 40.0% | |
| TGTTACGAGCCTGTTTGAAT+TGG | - | chr4.3:15418982-15419001 | MS.gene023504:intron | 40.0% | |
| TGTTAGGACACAGAAAATGG+TGG | - | chr4.3:15421589-15421608 | MS.gene023504:intron | 40.0% | |
| TTAACTGCCCTTGATCTTCT+CGG | - | chr4.3:15418736-15418755 | MS.gene023504:intron | 40.0% | |
| TTGACAAGGACTTACTTGGT+TGG | - | chr4.3:15421208-15421227 | MS.gene023504:intron | 40.0% | |
| TTGCCATGTTGTAACCCATT+TGG | - | chr4.3:15420827-15420846 | MS.gene023504:intron | 40.0% | |
| TTGTCAGGAAAGGATAGACA+GGG | + | chr4.3:15423154-15423173 | None:intergenic | 40.0% | |
| ! | AAGACCCATCTTCATTTTGC+AGG | + | chr4.3:15419316-15419335 | None:intergenic | 40.0% |
| ! | ATATTGTCGGCTAGTCATTC+CGG | + | chr4.3:15420801-15420820 | None:intergenic | 40.0% |
| ! | CAATTTGGGTGGTCTAGTTT+AGG | - | chr4.3:15420926-15420945 | MS.gene023504:intron | 40.0% |
| ! | CTATCATACATACTTTGGGG+TGG | - | chr4.3:15421645-15421664 | MS.gene023504:intron | 40.0% |
| ! | GAGATGATGGTTAAACCTAC+CGG | - | chr4.3:15420779-15420798 | MS.gene023504:intron | 40.0% |
| ! | GAGTTTTCCGAGAAGATCAA+GGG | + | chr4.3:15418746-15418765 | None:intergenic | 40.0% |
| ! | GCAGCTCTTGTTTGATAATC+AGG | + | chr4.3:15420154-15420173 | None:intergenic | 40.0% |
| ! | GTTAGCCTGCAAAATGAAGA+TGG | - | chr4.3:15419308-15419327 | MS.gene023504:intron | 40.0% |
| ! | TTATGTGGTTTGGGTTTGTG+TGG | - | chr4.3:15422867-15422886 | MS.gene023504:intron | 40.0% |
| ! | TTGTTGCCTGCTTCATGTTT+TGG | - | chr4.3:15421874-15421893 | MS.gene023504:intron | 40.0% |
| ! | TTTAGGTTCATTGCTGGAGA+TGG | - | chr4.3:15421313-15421332 | MS.gene023504:intron | 40.0% |
| ! | TTTCAGTTTTCTGCTGTGTG+GGG | - | chr4.3:15421154-15421173 | MS.gene023504:intron | 40.0% |
| !! | AACCCAAATGGGTTACAACA+TGG | + | chr4.3:15420833-15420852 | None:intergenic | 40.0% |
| !! | AACTGATTGGATGGTTCTGA+AGG | - | chr4.3:15420674-15420693 | MS.gene023504:CDS | 40.0% |
| !! | ACCAGTTTTTAGATCTTGCC+AGG | - | chr4.3:15421362-15421381 | MS.gene023504:intron | 40.0% |
| !! | ACTGATAAGAAGCGTTGATC+GGG | - | chr4.3:15422907-15422926 | MS.gene023504:intron | 40.0% |
| !! | ATGAGAAAGAGAGAGGTGTT+GGG | + | chr4.3:15421741-15421760 | None:intergenic | 40.0% |
| !! | CACTGATAAGAAGCGTTGAT+CGG | - | chr4.3:15422906-15422925 | MS.gene023504:intron | 40.0% |
| !! | CTATAGATCCAAGTGTTGGA+AGG | - | chr4.3:15420715-15420734 | MS.gene023504:intron | 40.0% |
| !! | CTTAGGTTGAGACAACCATT+TGG | - | chr4.3:15420390-15420409 | MS.gene023504:CDS | 40.0% |
| !! | TAACGCTGCTGTTTCAACAA+AGG | + | chr4.3:15420514-15420533 | None:intergenic | 40.0% |
| !! | TACACAGAAAGTGCTACATG+GGG | - | chr4.3:15422306-15422325 | MS.gene023504:CDS | 40.0% |
| !! | TTGTATTGACTGCTCACTCA+AGG | - | chr4.3:15420979-15420998 | MS.gene023504:intron | 40.0% |
| !!! | CTCTTTTTTGATGGGCTCTT+AGG | - | chr4.3:15420373-15420392 | MS.gene023504:CDS | 40.0% |
| !!! | GGTCTTTTTCAGGGGATATA+TGG | - | chr4.3:15419330-15419349 | MS.gene023504:intron | 40.0% |
| !!! | TGAAGATGGGTCTTTTTCAG+GGG | - | chr4.3:15419322-15419341 | MS.gene023504:intron | 40.0% |
| AAAGCATAAGCCGGGTCTAT+CGG | + | chr4.3:15423264-15423283 | None:intergenic | 45.0% | |
| AACCATAGGTTCAAGCATGG+TGG | - | chr4.3:15422607-15422626 | MS.gene023504:intron | 45.0% | |
| ACAAGGACTTACTTGGTTGG+TGG | - | chr4.3:15421211-15421230 | MS.gene023504:intron | 45.0% | |
| ACTGGCTGGATATCAACCAT+AGG | - | chr4.3:15422593-15422612 | MS.gene023504:intron | 45.0% | |
| AGCTGCAAAAACATGGATGG+TGG | - | chr4.3:15419544-15419563 | MS.gene023504:intron | 45.0% | |
| AGGATGAATGGAGCATACTG+GGG | - | chr4.3:15418712-15418731 | MS.gene023504:intron | 45.0% | |
| ATCAGTTGTCACCACGATGA+TGG | - | chr4.3:15418802-15418821 | MS.gene023504:intron | 45.0% | |
| ATCCGATTGACAACGTCTAC+GGG | + | chr4.3:15423288-15423307 | None:intergenic | 45.0% | |
| ATGAAGCAGTGGTGAGATGA+TGG | - | chr4.3:15420766-15420785 | MS.gene023504:intron | 45.0% | |
| CAGGATGAATGGAGCATACT+GGG | - | chr4.3:15418711-15418730 | MS.gene023504:intron | 45.0% | |
| GAGCGACAAGTTAAATCTGG+AGG | - | chr4.3:15421240-15421259 | MS.gene023504:intron | 45.0% | |
| GCAGGCAACAAAAAACCACT+AGG | + | chr4.3:15421865-15421884 | None:intergenic | 45.0% | |
| GCTCCTTGTTAGTCATCACT+TGG | + | chr4.3:15420548-15420567 | None:intergenic | 45.0% | |
| GGCCAATCATACAAATGCCA+TGG | - | chr4.3:15422327-15422346 | MS.gene023504:CDS | 45.0% | |
| GGCCCACAAGCTTAGAATTA+TGG | + | chr4.3:15421921-15421940 | None:intergenic | 45.0% | |
| GGGCTTGGGACAAGTTAATA+GGG | + | chr4.3:15420276-15420295 | None:intergenic | 45.0% | |
| GTATCCTTTGACACGTGTGT+TGG | - | chr4.3:15418941-15418960 | MS.gene023504:intron | 45.0% | |
| GTGCTCGTCTTATGTGGTTT+GGG | - | chr4.3:15422858-15422877 | MS.gene023504:intron | 45.0% | |
| TACCCGTAGACGTTGTCAAT+CGG | - | chr4.3:15423283-15423302 | MS.gene023504:CDS | 45.0% | |
| TAGACATCCACAGCATCATC+CGG | + | chr4.3:15421628-15421647 | None:intergenic | 45.0% | |
| TAGGGTTCACTGGATCAGTA+AGG | - | chr4.3:15421428-15421447 | MS.gene023504:intron | 45.0% | |
| TAGTGACCCCGTTATAGCAA+GGG | + | chr4.3:15421181-15421200 | None:intergenic | 45.0% | |
| TCAAACATGAGACCTTGAGG+AGG | + | chr4.3:15420893-15420912 | None:intergenic | 45.0% | |
| TCAGGATGAATGGAGCATAC+TGG | - | chr4.3:15418710-15418729 | MS.gene023504:intron | 45.0% | |
| TCAGTTGTCACCACGATGAT+GGG | - | chr4.3:15418803-15418822 | MS.gene023504:intron | 45.0% | |
| TCTACGGGTAAAGCATAAGC+CGG | + | chr4.3:15423273-15423292 | None:intergenic | 45.0% | |
| TGAACCAACACACGTGTCAA+AGG | + | chr4.3:15418948-15418967 | None:intergenic | 45.0% | |
| TGGACTGCCAGGTTATTTAG+TGG | - | chr4.3:15421472-15421491 | MS.gene023504:intron | 45.0% | |
| TGGGCTTGGGACAAGTTAAT+AGG | + | chr4.3:15420277-15420296 | None:intergenic | 45.0% | |
| TGGTGGAATTTCAGACAGAC+CGG | - | chr4.3:15421606-15421625 | MS.gene023504:intron | 45.0% | |
| TTATGGCCAAAGGAAGTCAC+TGG | + | chr4.3:15421806-15421825 | None:intergenic | 45.0% | |
| ! | ATTCTCTCCGGTGCCAATTT+GGG | - | chr4.3:15420912-15420931 | MS.gene023504:intron | 45.0% |
| ! | CATGAGAAAGAGAGAGGTGT+TGG | + | chr4.3:15421742-15421761 | None:intergenic | 45.0% |
| ! | CGAGTTTTCCGAGAAGATCA+AGG | + | chr4.3:15418747-15418766 | None:intergenic | 45.0% |
| ! | GAAACTTGAAAGGTGGGCTT+GGG | + | chr4.3:15420290-15420309 | None:intergenic | 45.0% |
| ! | TGAAACTTGAAAGGTGGGCT+TGG | + | chr4.3:15420291-15420310 | None:intergenic | 45.0% |
| ! | TTCAGTTTTCTGCTGTGTGG+GGG | - | chr4.3:15421155-15421174 | MS.gene023504:intron | 45.0% |
| !! | AAGTTGGTGCTCGTCTTATG+TGG | - | chr4.3:15422852-15422871 | MS.gene023504:intron | 45.0% |
| !! | CCTATATGAAGTGCTGTGTG+CGG | - | chr4.3:15419711-15419730 | MS.gene023504:intron | 45.0% |
| !! | CGTGTGTTGGTTCACTTTGA+AGG | - | chr4.3:15418954-15418973 | MS.gene023504:intron | 45.0% |
| !! | CTATATGAAGTGCTGTGTGC+GGG | - | chr4.3:15419712-15419731 | MS.gene023504:intron | 45.0% |
| !! | CTGATAAGAAGCGTTGATCG+GGG | - | chr4.3:15422908-15422927 | MS.gene023504:intron | 45.0% |
| !! | CTGCTGTTTCAACAAAGGCA+GGG | + | chr4.3:15420509-15420528 | None:intergenic | 45.0% |
| !! | CTGTGGTAATGGAACATCTC+AGG | - | chr4.3:15418692-15418711 | MS.gene023504:intron | 45.0% |
| !! | TATGGGGTGAAGTTGATACC+CGG | - | chr4.3:15419348-15419367 | MS.gene023504:intron | 45.0% |
| !! | TCAAGCATGGTGGTGGAAAT+GGG | - | chr4.3:15422617-15422636 | MS.gene023504:intron | 45.0% |
| !! | TGAGAAAGAGAGAGGTGTTG+GGG | + | chr4.3:15421740-15421759 | None:intergenic | 45.0% |
| !! | TTCAAGCATGGTGGTGGAAA+TGG | - | chr4.3:15422616-15422635 | MS.gene023504:intron | 45.0% |
| !!! | TTTTTTTTTTTTAAATATTC+TGG | - | chr4.3:15419252-15419271 | MS.gene023504:intron | 5.0% |
| AAGCTTGTGGGCCTAAAGTG+TGG | - | chr4.3:15421928-15421947 | MS.gene023504:intron | 50.0% | |
| ATTTGGTTGCACACCTGGTG+GGG | - | chr4.3:15419567-15419586 | MS.gene023504:intron | 50.0% | |
| CACCACCATGCTTGAACCTA+TGG | + | chr4.3:15422612-15422631 | None:intergenic | 50.0% | |
| CACTGACCAGTGACTTCCTT+TGG | - | chr4.3:15421797-15421816 | MS.gene023504:intron | 50.0% | |
| CAGACGGCACATGAACTGAT+TGG | - | chr4.3:15420661-15420680 | MS.gene023504:CDS | 50.0% | |
| CAGTTGTCACCACGATGATG+GGG | - | chr4.3:15418804-15418823 | MS.gene023504:intron | 50.0% | |
| CATAGGTTCAAGCATGGTGG+TGG | - | chr4.3:15422610-15422629 | MS.gene023504:intron | 50.0% | |
| CCAGGTATGCTACTCATGGT+GGG | - | chr4.3:15421380-15421399 | MS.gene023504:intron | 50.0% | |
| CCGCACACAGCACTTCATAT+AGG | + | chr4.3:15419714-15419733 | None:intergenic | 50.0% | |
| CGACACCGTAGATGTTGATG+AGG | - | chr4.3:15418765-15418784 | MS.gene023504:intron | 50.0% | |
| CGGCACATGAACTGATTGGA+TGG | - | chr4.3:15420665-15420684 | MS.gene023504:CDS | 50.0% | |
| CTACGGGTAAAGCATAAGCC+GGG | + | chr4.3:15423272-15423291 | None:intergenic | 50.0% | |
| CTAGTGACCCCGTTATAGCA+AGG | + | chr4.3:15421182-15421201 | None:intergenic | 50.0% | |
| CTCACATCAGGGAGTTTCTC+TGG | + | chr4.3:15421279-15421298 | None:intergenic | 50.0% | |
| CTTGCCAGGTATGCTACTCA+TGG | - | chr4.3:15421376-15421395 | MS.gene023504:intron | 50.0% | |
| GACTAGGCAGAAGACGTCTT+GGG | + | chr4.3:15420008-15420027 | None:intergenic | 50.0% | |
| GAGCGCATGGTGACTAAGTT+TGG | - | chr4.3:15422355-15422374 | MS.gene023504:CDS | 50.0% | |
| GGGTTAGGGGCCAATTTGAT+AGG | - | chr4.3:15419732-15419751 | MS.gene023504:intron | 50.0% | |
| GGTGCTCGTCTTATGTGGTT+TGG | - | chr4.3:15422857-15422876 | MS.gene023504:intron | 50.0% | |
| TAGACCACCCAAATTGGCAC+CGG | + | chr4.3:15420922-15420941 | None:intergenic | 50.0% | |
| TGACTAGGCAGAAGACGTCT+TGG | + | chr4.3:15420009-15420028 | None:intergenic | 50.0% | |
| TGGAGTGAAACCGATAGACC+CGG | - | chr4.3:15423251-15423270 | MS.gene023504:intron | 50.0% | |
| ! | AGTTGTCACCACGATGATGG+GGG | - | chr4.3:15418805-15418824 | MS.gene023504:intron | 50.0% |
| ! | GATTCTCTCCGGTGCCAATT+TGG | - | chr4.3:15420911-15420930 | MS.gene023504:intron | 50.0% |
| ! | GATTTGGTTGCACACCTGGT+GGG | - | chr4.3:15419566-15419585 | MS.gene023504:intron | 50.0% |
| ! | GGTTGATATCCAGCCAGTTC+AGG | + | chr4.3:15422591-15422610 | None:intergenic | 50.0% |
| ! | TTGTGTCGGAGCTTAGCTCT+GGG | + | chr4.3:15419877-15419896 | None:intergenic | 50.0% |
| !! | ATAAGAAGCGTTGATCGGGG+TGG | - | chr4.3:15422911-15422930 | MS.gene023504:intron | 50.0% |
| !! | CAAGCATGGTGGTGGAAATG+GGG | - | chr4.3:15422618-15422637 | MS.gene023504:intron | 50.0% |
| !! | CATACATACTTTGGGGTGGC+TGG | - | chr4.3:15421649-15421668 | MS.gene023504:intron | 50.0% |
| !! | CCAAGTGTTGGAAGGTCACA+CGG | - | chr4.3:15420723-15420742 | MS.gene023504:intron | 50.0% |
| !! | CTCTCTCACTTTTACGCTGC+TGG | - | chr4.3:15423062-15423081 | MS.gene023504:CDS | 50.0% |
| !! | GCTGCTGTTTCAACAAAGGC+AGG | + | chr4.3:15420510-15420529 | None:intergenic | 50.0% |
| !! | GGGGGATTTGCTGGAAATGT+TGG | - | chr4.3:15418823-15418842 | MS.gene023504:intron | 50.0% |
| ACCACCAGGCCAACCCAAAT+GGG | + | chr4.3:15420844-15420863 | None:intergenic | 55.0% | |
| AGACAGACCGGATGATGCTG+TGG | - | chr4.3:15421618-15421637 | MS.gene023504:intron | 55.0% | |
| CACCATGCGCTCTATCTCCA+TGG | + | chr4.3:15422347-15422366 | None:intergenic | 55.0% | |
| CAGCAAATCCCCCATCATCG+TGG | + | chr4.3:15418816-15418835 | None:intergenic | 55.0% | |
| CCCACCATGAGTAGCATACC+TGG | + | chr4.3:15421383-15421402 | None:intergenic | 55.0% | |
| CCGTGTGACCTTCCAACACT+TGG | + | chr4.3:15420726-15420745 | None:intergenic | 55.0% | |
| GCCAGGTATGCTACTCATGG+TGG | - | chr4.3:15421379-15421398 | MS.gene023504:intron | 55.0% | |
| GTTGTGTCGGAGCTTAGCTC+TGG | + | chr4.3:15419878-15419897 | None:intergenic | 55.0% | |
| TGCCATGGAGATAGAGCGCA+TGG | - | chr4.3:15422342-15422361 | MS.gene023504:CDS | 55.0% | |
| TTGGAGTGTGCTCCTCCTCA+AGG | - | chr4.3:15420878-15420897 | MS.gene023504:intron | 55.0% | |
| ! | GGATTTGGTTGCACACCTGG+TGG | - | chr4.3:15419565-15419584 | MS.gene023504:intron | 55.0% |
| ! | GGTGGATTTGGTTGCACACC+TGG | - | chr4.3:15419562-15419581 | MS.gene023504:intron | 55.0% |
| ! | TGTCGGCTAGTCATTCCGGT+AGG | + | chr4.3:15420797-15420816 | None:intergenic | 55.0% |
| ! | TGTGGGGGCCCTTGCTATAA+CGG | - | chr4.3:15421170-15421189 | MS.gene023504:intron | 55.0% |
| !! | AAGTGCTGTGTGCGGGTTAG+GGG | - | chr4.3:15419719-15419738 | MS.gene023504:intron | 55.0% |
| !! | ATTGGTAGGTGGGCTGCAGA+CGG | - | chr4.3:15420645-15420664 | MS.gene023504:CDS | 55.0% |
| !! | CACGATGATGGGGGATTTGC+TGG | - | chr4.3:15418814-15418833 | MS.gene023504:intron | 55.0% |
| !! | GAAGTGCTGTGTGCGGGTTA+GGG | - | chr4.3:15419718-15419737 | MS.gene023504:intron | 55.0% |
| !! | GGGTCTATCGGTTTCACTCC+AGG | + | chr4.3:15423252-15423271 | None:intergenic | 55.0% |
| !! | GTAACCCATTTGGGTTGGCC+TGG | - | chr4.3:15420837-15420856 | MS.gene023504:intron | 55.0% |
| !! | GTGGTGTTGGCTTGAGGTCT+TGG | - | chr4.3:15420859-15420878 | MS.gene023504:intron | 55.0% |
| !! | TGAAGTGCTGTGTGCGGGTT+AGG | - | chr4.3:15419717-15419736 | MS.gene023504:intron | 55.0% |
| CACCACCAGGCCAACCCAAA+TGG | + | chr4.3:15420845-15420864 | None:intergenic | 60.0% | |
| CCAGCATGAGATTCCCCACC+AGG | + | chr4.3:15419583-15419602 | None:intergenic | 60.0% | |
| CCTGGTGGGGAATCTCATGC+TGG | - | chr4.3:15419580-15419599 | MS.gene023504:intron | 60.0% | |
| GACCTCAAGCCAACACCACC+AGG | + | chr4.3:15420858-15420877 | None:intergenic | 60.0% | |
| ! | CTCTCCGGTGCCAATTTGGG+TGG | - | chr4.3:15420915-15420934 | MS.gene023504:intron | 60.0% |
| ! | GTGGGGGCCCTTGCTATAAC+GGG | - | chr4.3:15421171-15421190 | MS.gene023504:intron | 60.0% |
| ! | TGGGGGCCCTTGCTATAACG+GGG | - | chr4.3:15421172-15421191 | MS.gene023504:intron | 60.0% |
| !! | ACCCATTTGGGTTGGCCTGG+TGG | - | chr4.3:15420840-15420859 | MS.gene023504:intron | 60.0% |
| !! | TTGGGTTGGCCTGGTGGTGT+TGG | - | chr4.3:15420846-15420865 | MS.gene023504:intron | 60.0% |
| !! | GGCCTGGTGGTGTTGGCTTG+AGG | - | chr4.3:15420853-15420872 | MS.gene023504:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 15418532 | 15423323 | 15418532 | ID=MS.gene023504 |
| chr4.3 | mRNA | 15418532 | 15423323 | 15418532 | ID=MS.gene023504.t1;Parent=MS.gene023504 |
| chr4.3 | exon | 15423270 | 15423323 | 15423270 | ID=MS.gene023504.t1.exon1;Parent=MS.gene023504.t1 |
| chr4.3 | CDS | 15423270 | 15423323 | 15423270 | ID=cds.MS.gene023504.t1;Parent=MS.gene023504.t1 |
| chr4.3 | exon | 15422915 | 15423182 | 15422915 | ID=MS.gene023504.t1.exon2;Parent=MS.gene023504.t1 |
| chr4.3 | CDS | 15422915 | 15423182 | 15422915 | ID=cds.MS.gene023504.t1;Parent=MS.gene023504.t1 |
| chr4.3 | exon | 15422486 | 15422552 | 15422486 | ID=MS.gene023504.t1.exon3;Parent=MS.gene023504.t1 |
| chr4.3 | CDS | 15422486 | 15422552 | 15422486 | ID=cds.MS.gene023504.t1;Parent=MS.gene023504.t1 |
| chr4.3 | exon | 15422248 | 15422396 | 15422248 | ID=MS.gene023504.t1.exon4;Parent=MS.gene023504.t1 |
| chr4.3 | CDS | 15422248 | 15422396 | 15422248 | ID=cds.MS.gene023504.t1;Parent=MS.gene023504.t1 |
| chr4.3 | exon | 15420562 | 15420695 | 15420562 | ID=MS.gene023504.t1.exon5;Parent=MS.gene023504.t1 |
| chr4.3 | CDS | 15420562 | 15420695 | 15420562 | ID=cds.MS.gene023504.t1;Parent=MS.gene023504.t1 |
| chr4.3 | exon | 15420373 | 15420471 | 15420373 | ID=MS.gene023504.t1.exon6;Parent=MS.gene023504.t1 |
| chr4.3 | CDS | 15420373 | 15420471 | 15420373 | ID=cds.MS.gene023504.t1;Parent=MS.gene023504.t1 |
| chr4.3 | exon | 15420185 | 15420260 | 15420185 | ID=MS.gene023504.t1.exon7;Parent=MS.gene023504.t1 |
| chr4.3 | CDS | 15420185 | 15420260 | 15420185 | ID=cds.MS.gene023504.t1;Parent=MS.gene023504.t1 |
| chr4.3 | exon | 15418532 | 15418626 | 15418532 | ID=MS.gene023504.t1.exon8;Parent=MS.gene023504.t1 |
| chr4.3 | CDS | 15418532 | 15418626 | 15418532 | ID=cds.MS.gene023504.t1;Parent=MS.gene023504.t1 |
| Gene Sequence |
| Protein sequence |
