Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08956.t1 | XP_024629075.1 | 98.4 | 313 | 5 | 0 | 1 | 313 | 1 | 313 | 8.50E-103 | 383.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08956.t1 | Q84J75 | 87.5 | 313 | 39 | 0 | 1 | 313 | 9 | 321 | 1.2e-86 | 321.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08956.t1 | A0A396GUS6 | 98.4 | 313 | 5 | 0 | 1 | 313 | 1 | 313 | 6.1e-103 | 383.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene37916 | MS.gene08956 | PPI |
| MS.gene065113 | MS.gene08956 | PPI |
| MS.gene08956 | MS.gene065113 | PPI |
| MS.gene08956 | MS.gene08800 | PPI |
| MS.gene029385 | MS.gene08956 | PPI |
| MS.gene71852 | MS.gene08956 | PPI |
| MS.gene08956 | MS.gene020444 | PPI |
| MS.gene013090 | MS.gene08956 | PPI |
| MS.gene09288 | MS.gene08956 | PPI |
| MS.gene023504 | MS.gene08956 | PPI |
| MS.gene76283 | MS.gene08956 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08956.t1 | MTR_1g111160 | 92.332 | 313 | 24 | 0 | 1 | 313 | 1 | 313 | 0.0 | 595 |
| MS.gene08956.t1 | MTR_1g111160 | 90.311 | 289 | 28 | 0 | 1 | 289 | 1 | 289 | 0.0 | 536 |
| MS.gene08956.t1 | MTR_1g111160 | 91.829 | 257 | 21 | 0 | 1 | 257 | 1 | 257 | 2.13e-175 | 486 |
| MS.gene08956.t1 | MTR_1g111160 | 27.500 | 160 | 116 | 0 | 103 | 262 | 7 | 166 | 5.72e-16 | 76.6 |
| MS.gene08956.t1 | MTR_1g111160 | 88.889 | 252 | 28 | 0 | 1 | 252 | 1 | 252 | 2.74e-165 | 460 |
| MS.gene08956.t1 | MTR_1g111160 | 27.500 | 160 | 116 | 0 | 103 | 262 | 7 | 166 | 6.52e-16 | 76.3 |
| MS.gene08956.t1 | MTR_7g024540 | 31.410 | 312 | 174 | 7 | 21 | 295 | 33 | 341 | 4.76e-41 | 146 |
| MS.gene08956.t1 | MTR_6g007165 | 30.657 | 274 | 179 | 4 | 1 | 270 | 44 | 310 | 1.95e-34 | 130 |
| MS.gene08956.t1 | MTR_8g085230 | 94.286 | 35 | 2 | 0 | 279 | 313 | 24 | 58 | 1.08e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08956.t1 | AT5G12210 | 80.511 | 313 | 61 | 0 | 1 | 313 | 9 | 321 | 0.0 | 521 |
| MS.gene08956.t1 | AT3G12070 | 79.299 | 314 | 62 | 2 | 3 | 313 | 4 | 317 | 0.0 | 520 |
| MS.gene08956.t1 | AT3G12070 | 79.299 | 314 | 62 | 2 | 3 | 313 | 4 | 317 | 0.0 | 520 |
| MS.gene08956.t1 | AT3G12070 | 79.299 | 314 | 62 | 2 | 3 | 313 | 4 | 317 | 0.0 | 520 |
| MS.gene08956.t1 | AT5G12210 | 80.192 | 313 | 61 | 1 | 1 | 313 | 9 | 320 | 0.0 | 515 |
| MS.gene08956.t1 | AT3G12070 | 77.876 | 226 | 47 | 2 | 3 | 225 | 4 | 229 | 1.12e-128 | 366 |
| MS.gene08956.t1 | AT2G39550 | 32.686 | 309 | 170 | 6 | 32 | 303 | 62 | 369 | 1.97e-44 | 155 |
| MS.gene08956.t1 | AT5G40280 | 32.864 | 213 | 133 | 4 | 37 | 242 | 113 | 322 | 2.68e-24 | 102 |
| MS.gene08956.t1 | AT5G40280 | 30.120 | 166 | 111 | 2 | 82 | 242 | 189 | 354 | 1.83e-20 | 92.0 |
Find 68 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGCCTGATCATGATTGAT+AGG | 0.270530 | 4.4:-14725876 | MS.gene08956:CDS |
| ATGTCTATCATACATACTTT+GGG | 0.346369 | 4.4:-14725644 | MS.gene08956:CDS |
| GAAGCTTATAAAGTTTATCT+TGG | 0.359856 | 4.4:-14725833 | MS.gene08956:CDS |
| GGTGGATTTGGTTGCACACC+TGG | 0.360124 | 4.4:-14727724 | MS.gene08956:CDS |
| CTCACATCAGGGAGTTTCTC+TGG | 0.361859 | 4.4:+14726009 | None:intergenic |
| TCAGGATGAATGGAGCATAC+TGG | 0.362998 | 4.4:-14728578 | MS.gene08956:CDS |
| AACTGTTAGGACACAGAAAA+TGG | 0.374598 | 4.4:-14725699 | MS.gene08956:intron |
| CTTGTTGACAAGGACTTACT+TGG | 0.380516 | 4.4:-14726081 | MS.gene08956:CDS |
| ATCAGTTGTCACCACTTTGA+TGG | 0.388074 | 4.4:-14728486 | MS.gene08956:CDS |
| GATGTCTATCATACATACTT+TGG | 0.407924 | 4.4:-14725645 | MS.gene08956:CDS |
| TCATCTTATTGATGTTGATA+AGG | 0.414501 | 4.4:-14728379 | MS.gene08956:CDS |
| CAGGATGAATGGAGCATACT+GGG | 0.420427 | 4.4:-14728577 | MS.gene08956:CDS |
| CTTTCACTTCTTGAATATCC+TGG | 0.427177 | 4.4:-14724054 | MS.gene08956:CDS |
| CCAAGCGACGTAATATTGAT+AGG | 0.429921 | 4.4:+14727803 | None:intergenic |
| TTAACTGCCCTTGATCTTCT+CGG | 0.431904 | 4.4:-14728552 | MS.gene08956:CDS |
| TGTGAGCGACAAGTTAAATC+TGG | 0.432622 | 4.4:-14726048 | MS.gene08956:CDS |
| TACCCGTAGACGTTGTCAAT+CGG | 0.440295 | 4.4:-14724002 | MS.gene08956:CDS |
| TCAGTTGTCACCACTTTGAT+GGG | 0.441253 | 4.4:-14728485 | MS.gene08956:CDS |
| ATGTTGATGAGGTTGTTTCA+TGG | 0.447603 | 4.4:-14728512 | MS.gene08956:CDS |
| AAAGTTTATCTTGGACTGCC+AGG | 0.456260 | 4.4:-14725824 | MS.gene08956:intron |
| CATACATACTTTGGGGTGGC+TGG | 0.466568 | 4.4:-14725636 | MS.gene08956:intron |
| AATCCGATTGACAACGTCTA+CGG | 0.470884 | 4.4:+14723999 | None:intergenic |
| CTGTGGTAATGGAACATCTC+AGG | 0.476418 | 4.4:-14728596 | MS.gene08956:CDS |
| GTTAAATCTGGAGGTCTGAA+TGG | 0.477849 | 4.4:-14726036 | MS.gene08956:CDS |
| ATCCGATTGACAACGTCTAC+GGG | 0.478203 | 4.4:+14724000 | None:intergenic |
| GTTAGCCTGCAAAATGAAGA+TGG | 0.479793 | 4.4:-14727978 | MS.gene08956:CDS |
| GGGTCTATCGGTTTCACTCC+AGG | 0.481923 | 4.4:+14724036 | None:intergenic |
| CCTATCAATATTACGTCGCT+TGG | 0.484014 | 4.4:-14727803 | MS.gene08956:CDS |
| GAACCCTATCAATCATGATC+AGG | 0.489404 | 4.4:+14725872 | None:intergenic |
| ATGGAACATCTCAGGATGAA+TGG | 0.497514 | 4.4:-14728588 | MS.gene08956:CDS |
| TAGCCTGATCATGATTGATA+GGG | 0.498142 | 4.4:-14725875 | MS.gene08956:CDS |
| GATTTGGTTGCACACCTGGT+GGG | 0.498689 | 4.4:-14727720 | MS.gene08956:CDS |
| ATTTGGTTGCACACCTGGTG+GGG | 0.500235 | 4.4:-14727719 | MS.gene08956:CDS |
| CCAGCATGAGATTCCCCACC+AGG | 0.510818 | 4.4:+14727706 | None:intergenic |
| ATATATACTATCAGTTGAAA+AGG | 0.512188 | 4.4:-14728725 | MS.gene08956:intron |
| ACAAGGACTTACTTGGTTGG+TGG | 0.520652 | 4.4:-14726074 | MS.gene08956:CDS |
| GGATTTGGTTGCACACCTGG+TGG | 0.522911 | 4.4:-14727721 | MS.gene08956:CDS |
| TTGACAAGGACTTACTTGGT+TGG | 0.525370 | 4.4:-14726077 | MS.gene08956:CDS |
| GCCAGGTATGCTACTCATGG+TGG | 0.535317 | 4.4:-14725906 | MS.gene08956:intron |
| TCATGATTGATAGGGTTCAC+TGG | 0.538238 | 4.4:-14725867 | MS.gene08956:CDS |
| AAAGCATAAGCCGGGTCTAT+CGG | 0.539627 | 4.4:+14724024 | None:intergenic |
| TAGACATCCACAGCATCATC+CGG | 0.549532 | 4.4:+14725660 | None:intergenic |
| CCAGGTATGCTACTCATGGT+GGG | 0.555106 | 4.4:-14725905 | MS.gene08956:intron |
| GGATAGAATAAATGTGGAGA+AGG | 0.559748 | 4.4:-14727782 | MS.gene08956:CDS |
| TGGTGGAATTTCAGACAGAC+CGG | 0.576594 | 4.4:-14725679 | MS.gene08956:CDS |
| CTTGCCAGGTATGCTACTCA+TGG | 0.581436 | 4.4:-14725909 | MS.gene08956:intron |
| CCTGGTGGGGAATCTCATGC+TGG | 0.582123 | 4.4:-14727706 | MS.gene08956:CDS |
| AACAACCTCATCAACATCTA+CGG | 0.586257 | 4.4:+14728518 | None:intergenic |
| TCTACGGGTAAAGCATAAGC+CGG | 0.595209 | 4.4:+14724015 | None:intergenic |
| TAGGGTTCACTGGATCAGTA+AGG | 0.600098 | 4.4:-14725857 | MS.gene08956:CDS |
| TTAGCCTGCAAAATGAAGAT+GGG | 0.605987 | 4.4:-14727977 | MS.gene08956:CDS |
| CTAGTGACCCCGTTATAGCA+AGG | 0.608314 | 4.4:+14726106 | None:intergenic |
| AGTTGTCACCACTTTGATGG+GGG | 0.613751 | 4.4:-14728483 | MS.gene08956:CDS |
| TCGCTTGGATAGAATAAATG+TGG | 0.614658 | 4.4:-14727788 | MS.gene08956:CDS |
| CAGTTGTCACCACTTTGATG+GGG | 0.620002 | 4.4:-14728484 | MS.gene08956:CDS |
| GTCACTAGATCTTGTTGACA+AGG | 0.624947 | 4.4:-14726091 | MS.gene08956:CDS |
| TAGTGACCCCGTTATAGCAA+GGG | 0.631959 | 4.4:+14726107 | None:intergenic |
| CTACGGGTAAAGCATAAGCC+GGG | 0.632140 | 4.4:+14724016 | None:intergenic |
| CTATCATACATACTTTGGGG+TGG | 0.633143 | 4.4:-14725640 | MS.gene08956:CDS |
| AGACAGACCGGATGATGCTG+TGG | 0.645799 | 4.4:-14725667 | MS.gene08956:CDS |
| TGGAGTGAAACCGATAGACC+CGG | 0.648295 | 4.4:-14724034 | MS.gene08956:CDS |
| TGTTAGGACACAGAAAATGG+TGG | 0.653329 | 4.4:-14725696 | MS.gene08956:intron |
| TGTCTATCATACATACTTTG+GGG | 0.654532 | 4.4:-14725643 | MS.gene08956:CDS |
| CGACACCGTAGATGTTGATG+AGG | 0.660761 | 4.4:-14728523 | MS.gene08956:CDS |
| CTGAGTGTATACAAAATGTG+TGG | 0.673916 | 4.4:+14728435 | None:intergenic |
| TATGGGGTGAAGTTGATACC+CGG | 0.685066 | 4.4:-14727938 | MS.gene08956:intron |
| AGGATGAATGGAGCATACTG+GGG | 0.699697 | 4.4:-14728576 | MS.gene08956:CDS |
| GAGCGACAAGTTAAATCTGG+AGG | 0.710603 | 4.4:-14726045 | MS.gene08956:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATGTTAAATTGAATTT+GGG | + | chr4.4:14728564-14728583 | None:intergenic | 10.0% |
| !!! | ATTTTTTTATTAGAAGAATT+GGG | - | chr4.4:14727444-14727463 | MS.gene08956:intron | 10.0% |
| !!! | TATATTCAAATATCTTTTAA+TGG | + | chr4.4:14728445-14728464 | None:intergenic | 10.0% |
| !!! | TATTTTTTTATTAGAAGAAT+TGG | - | chr4.4:14727443-14727462 | MS.gene08956:intron | 10.0% |
| !! | AACAAAAAAAATCATTAAAG+AGG | - | chr4.4:14725911-14725930 | MS.gene08956:intron | 15.0% |
| !! | AATTCAATTTAACATATAAC+AGG | - | chr4.4:14728565-14728584 | MS.gene08956:CDS | 15.0% |
| !! | AGTTATATAATAATGAATGT+CGG | - | chr4.4:14728175-14728194 | MS.gene08956:intron | 15.0% |
| !! | ATAACATTCAATATGAAATT+AGG | + | chr4.4:14727426-14727445 | None:intergenic | 15.0% |
| !! | ATTAAAAATGAAACATAGTT+GGG | + | chr4.4:14724068-14724087 | None:intergenic | 15.0% |
| !! | GTTATATGTTAAATTGAATT+TGG | + | chr4.4:14728565-14728584 | None:intergenic | 15.0% |
| !! | GTTGTAAAAATAGTATAATA+TGG | - | chr4.4:14727666-14727685 | MS.gene08956:intron | 15.0% |
| !! | TATTAAAAATGAAACATAGT+TGG | + | chr4.4:14724069-14724088 | None:intergenic | 15.0% |
| !!! | AGAGATAATATTTTTTATGT+TGG | + | chr4.4:14725382-14725401 | None:intergenic | 15.0% |
| !!! | ATAAAACTTGTTAATACATA+AGG | + | chr4.4:14724650-14724669 | None:intergenic | 15.0% |
| !!! | ATAGTCTTTTTTATGTAAAT+TGG | - | chr4.4:14725562-14725581 | MS.gene08956:intron | 15.0% |
| !!! | CTATTTAGTTTTTAATTGTT+TGG | - | chr4.4:14727636-14727655 | MS.gene08956:intron | 15.0% |
| !!! | TTTTTTTATTAGAAGAATTG+GGG | - | chr4.4:14727445-14727464 | MS.gene08956:intron | 15.0% |
| !! | AATAGAGAAAATATACTTTC+TGG | + | chr4.4:14725518-14725537 | None:intergenic | 20.0% |
| !! | AGAATAGATGAAATACAAAA+AGG | + | chr4.4:14727142-14727161 | None:intergenic | 20.0% |
| !! | ATATATACTATCAGTTGAAA+AGG | - | chr4.4:14724016-14724035 | MS.gene08956:CDS | 20.0% |
| !! | ATGGCAAATATTAATATTGT+CGG | + | chr4.4:14726270-14726289 | None:intergenic | 20.0% |
| !! | ATTCATTATTATATAACTGC+AGG | + | chr4.4:14728173-14728192 | None:intergenic | 20.0% |
| !! | CATTTAGATTATATTGATGT+CGG | - | chr4.4:14727218-14727237 | MS.gene08956:intron | 20.0% |
| !! | CTTATAAGATTAATAATGAG+TGG | - | chr4.4:14725784-14725803 | MS.gene08956:intron | 20.0% |
| !! | GAATAGATGAAATACAAAAA+GGG | + | chr4.4:14727141-14727160 | None:intergenic | 20.0% |
| !! | GTTATATAATAATGAATGTC+GGG | - | chr4.4:14728176-14728195 | MS.gene08956:intron | 20.0% |
| !! | TAAAAAAGACTATGTTATAG+AGG | + | chr4.4:14725555-14725574 | None:intergenic | 20.0% |
| !!! | ATGTATTAACAAGTTTTATG+TGG | - | chr4.4:14724651-14724670 | MS.gene08956:intron | 20.0% |
| !!! | ATTGTTCCTTATTTGATTTT+GGG | + | chr4.4:14725215-14725234 | None:intergenic | 20.0% |
| !!! | CTTTTTTATGTAAATTGGAT+TGG | - | chr4.4:14725567-14725586 | MS.gene08956:intron | 20.0% |
| !!! | GAAAAAAACTCTTTTTTGAT+GGG | - | chr4.4:14725821-14725840 | MS.gene08956:intron | 20.0% |
| !!! | GCATTTAATTTTAGATCATT+TGG | - | chr4.4:14727474-14727493 | MS.gene08956:intron | 20.0% |
| !!! | TATTGTTCCTTATTTGATTT+TGG | + | chr4.4:14725216-14725235 | None:intergenic | 20.0% |
| !!! | TGAAAAAAACTCTTTTTTGA+TGG | - | chr4.4:14725820-14725839 | MS.gene08956:intron | 20.0% |
| !!! | TGTATTAACAAGTTTTATGT+GGG | - | chr4.4:14724652-14724671 | MS.gene08956:intron | 20.0% |
| !!! | TTTATTTGGAATTCAGAAAA+TGG | + | chr4.4:14726535-14726554 | None:intergenic | 20.0% |
| ! | AAAAATAAGCCAATCTTTAC+CGG | - | chr4.4:14724624-14724643 | MS.gene08956:intron | 25.0% |
| ! | AAAAATATGCCAATTCAAAC+AGG | + | chr4.4:14724447-14724466 | None:intergenic | 25.0% |
| ! | AAAAATTCCACTAAATAACC+TGG | + | chr4.4:14726938-14726957 | None:intergenic | 25.0% |
| ! | ACATAAGTAATTGTATTGTC+AGG | + | chr4.4:14728625-14728644 | None:intergenic | 25.0% |
| ! | ATGTCTATCATACATACTTT+GGG | - | chr4.4:14727097-14727116 | MS.gene08956:intron | 25.0% |
| ! | ATTTCAAGAGATAGACAAAA+AGG | - | chr4.4:14727281-14727300 | MS.gene08956:intron | 25.0% |
| ! | CATTGCATATTAAAATGACT+AGG | + | chr4.4:14725480-14725499 | None:intergenic | 25.0% |
| ! | GAAAACAAGAAATCTTCAAA+AGG | + | chr4.4:14725140-14725159 | None:intergenic | 25.0% |
| ! | GAAGCTTATAAAGTTTATCT+TGG | - | chr4.4:14726908-14726927 | MS.gene08956:intron | 25.0% |
| ! | GAGAAACAAAGAAAAACAAT+AGG | - | chr4.4:14728414-14728433 | MS.gene08956:CDS | 25.0% |
| ! | TAATCACTCAAAGATCAAAA+TGG | + | chr4.4:14724844-14724863 | None:intergenic | 25.0% |
| ! | TCATCTTATTGATGTTGATA+AGG | - | chr4.4:14724362-14724381 | MS.gene08956:intron | 25.0% |
| ! | TCTCAAAAGGTTAAACTATT+AGG | - | chr4.4:14727533-14727552 | MS.gene08956:intron | 25.0% |
| ! | TTATCTATGTTGAAACTGTT+AGG | - | chr4.4:14727029-14727048 | MS.gene08956:intron | 25.0% |
| ! | TTGTCTATCTCTTGAAATTA+TGG | + | chr4.4:14727279-14727298 | None:intergenic | 25.0% |
| ! | TTTCTGTGTAAATTATAACG+TGG | + | chr4.4:14727752-14727771 | None:intergenic | 25.0% |
| !! | ACTCATTGCATTCTTTTATT+TGG | + | chr4.4:14726549-14726568 | None:intergenic | 25.0% |
| !! | TCAAATATCTTTTAATGGTC+AGG | + | chr4.4:14728440-14728459 | None:intergenic | 25.0% |
| !! | TTTTATTCATAAGCTTCTCA+AGG | - | chr4.4:14724510-14724529 | MS.gene08956:intron | 25.0% |
| !!! | GAGAAAATCTTTTCAAGTTT+AGG | - | chr4.4:14726752-14726771 | MS.gene08956:intron | 25.0% |
| !!! | TTGTTCCTTATTTGATTTTG+GGG | + | chr4.4:14725214-14725233 | None:intergenic | 25.0% |
| AAACTATCTTTCTTCTGCAA+AGG | + | chr4.4:14724120-14724139 | None:intergenic | 30.0% | |
| AAAGAGGAAATCATTGCTAA+TGG | - | chr4.4:14725927-14725946 | MS.gene08956:intron | 30.0% | |
| AACCACCTATAAACTCATAA+GGG | + | chr4.4:14727903-14727922 | None:intergenic | 30.0% | |
| AAGAGGAAATCATTGCTAAT+GGG | - | chr4.4:14725928-14725947 | MS.gene08956:intron | 30.0% | |
| AGTAATTGTATTGTCAGGAA+AGG | + | chr4.4:14728620-14728639 | None:intergenic | 30.0% | |
| ATAGTCCCTTATGAGTTTAT+AGG | - | chr4.4:14727895-14727914 | MS.gene08956:intron | 30.0% | |
| ATGGAGCTTAAGAAAAATAC+CGG | + | chr4.4:14724825-14724844 | None:intergenic | 30.0% | |
| CATTATAAGCTGCAAAAACA+TGG | - | chr4.4:14724992-14725011 | MS.gene08956:intron | 30.0% | |
| GATGTCTATCATACATACTT+TGG | - | chr4.4:14727096-14727115 | MS.gene08956:intron | 30.0% | |
| GTAGTCACATAAAACAAGAT+AGG | - | chr4.4:14728260-14728279 | MS.gene08956:intron | 30.0% | |
| TATAGTCCAAAAATGCAGTA+AGG | + | chr4.4:14724870-14724889 | None:intergenic | 30.0% | |
| TGGAATAGTTCAAACGTTAA+AGG | - | chr4.4:14728387-14728406 | MS.gene08956:CDS | 30.0% | |
| TGTCTATCATACATACTTTG+GGG | - | chr4.4:14727098-14727117 | MS.gene08956:intron | 30.0% | |
| TTTAGATCATTTGGTCATAG+AGG | - | chr4.4:14727483-14727502 | MS.gene08956:intron | 30.0% | |
| ! | GAAAAGATTTTCTCACATCA+GGG | + | chr4.4:14726746-14726765 | None:intergenic | 30.0% |
| ! | TGAAAAGATTTTCTCACATC+AGG | + | chr4.4:14726747-14726766 | None:intergenic | 30.0% |
| !! | AACTTGTTAATACATAAGGC+CGG | + | chr4.4:14724646-14724665 | None:intergenic | 30.0% |
| !! | ATTTTTCAACAAGCACTAAC+GGG | + | chr4.4:14728021-14728040 | None:intergenic | 30.0% |
| !! | GATTTTTCAACAAGCACTAA+CGG | + | chr4.4:14728022-14728041 | None:intergenic | 30.0% |
| !! | TTAACAAGTTTTATGTGGGT+CGG | - | chr4.4:14724656-14724675 | MS.gene08956:intron | 30.0% |
| !!! | ATGGTCTTATTGTTTTTCTC+AGG | - | chr4.4:14726788-14726807 | MS.gene08956:intron | 30.0% |
| !!! | CATGTTTTTTTCGTCTTTTG+TGG | - | chr4.4:14726970-14726989 | MS.gene08956:intron | 30.0% |
| !!! | GAAAGATAGTTTTGAATCTG+TGG | - | chr4.4:14724128-14724147 | MS.gene08956:intron | 30.0% |
| !!! | GTTGTTTTATTTGTTGTTGC+AGG | - | chr4.4:14728663-14728682 | MS.gene08956:intron | 30.0% |
| !!! | GTTTAACCTTTTGAGATACT+TGG | + | chr4.4:14727529-14727548 | None:intergenic | 30.0% |
| !!! | TAGTTTTGAATCTGTGGTAA+TGG | - | chr4.4:14724134-14724153 | MS.gene08956:intron | 30.0% |
| AACAACCTCATCAACATCTA+CGG | + | chr4.4:14724226-14724245 | None:intergenic | 35.0% | |
| AACCTAAGATAACAAGTCGA+TGG | + | chr4.4:14724897-14724916 | None:intergenic | 35.0% | |
| AACTGTTAGGACACAGAAAA+TGG | - | chr4.4:14727042-14727061 | MS.gene08956:intron | 35.0% | |
| ACTATGAGAAATTGGTAGGT+GGG | - | chr4.4:14726091-14726110 | MS.gene08956:CDS | 35.0% | |
| AGAAAGTAATCACACTGTTG+CGG | - | chr4.4:14728213-14728232 | MS.gene08956:intron | 35.0% | |
| AGAAATGTTAGCGAGAAAGT+TGG | - | chr4.4:14728292-14728311 | MS.gene08956:intron | 35.0% | |
| AGACAACCATTTGGATTGAA+GGG | - | chr4.4:14725855-14725874 | MS.gene08956:CDS | 35.0% | |
| AGGAACCCCAAAATCAAATA+AGG | - | chr4.4:14725206-14725225 | MS.gene08956:intron | 35.0% | |
| ATAAGCTGCAAAAACATGGA+TGG | - | chr4.4:14724996-14725015 | MS.gene08956:intron | 35.0% | |
| ATACTTTCTCTGAGTTGTGT+CGG | + | chr4.4:14725346-14725365 | None:intergenic | 35.0% | |
| ATGCCATAATTCTAAGCTTG+TGG | - | chr4.4:14727371-14727390 | MS.gene08956:intron | 35.0% | |
| CACAGCAGAAAACTGAAAAT+AGG | + | chr4.4:14726608-14726627 | None:intergenic | 35.0% | |
| CTGAGTGTATACAAAATGTG+TGG | + | chr4.4:14724309-14724328 | None:intergenic | 35.0% | |
| CTTTCACTTCTTGAATATCC+TGG | - | chr4.4:14728687-14728706 | MS.gene08956:intron | 35.0% | |
| GAACCACCTATAAACTCATA+AGG | + | chr4.4:14727904-14727923 | None:intergenic | 35.0% | |
| GAAGACTATGAGAAATTGGT+AGG | - | chr4.4:14726087-14726106 | MS.gene08956:CDS | 35.0% | |
| GATGCAATTGCAAGCTTATA+TGG | + | chr4.4:14725680-14725699 | None:intergenic | 35.0% | |
| GGATAGAATAAATGTGGAGA+AGG | - | chr4.4:14724959-14724978 | MS.gene08956:intron | 35.0% | |
| GTTGAAAAATCTACCTGAAC+TGG | - | chr4.4:14728031-14728050 | MS.gene08956:intron | 35.0% | |
| TAAATAGAACGACATGCATC+TGG | + | chr4.4:14727623-14727642 | None:intergenic | 35.0% | |
| TAAATGCATGAGAAAGAGAG+AGG | + | chr4.4:14727204-14727223 | None:intergenic | 35.0% | |
| TAGCCTGATCATGATTGATA+GGG | - | chr4.4:14726866-14726885 | MS.gene08956:intron | 35.0% | |
| TATGAGTTTATAGGTGGTTC+TGG | - | chr4.4:14727904-14727923 | MS.gene08956:intron | 35.0% | |
| TCGCTTGGATAGAATAAATG+TGG | - | chr4.4:14724953-14724972 | MS.gene08956:intron | 35.0% | |
| TCTAGCGTAAGGTTGAAAAT+TGG | - | chr4.4:14727718-14727737 | MS.gene08956:CDS | 35.0% | |
| TCTCTTGAAATTATGGCCAA+AGG | + | chr4.4:14727272-14727291 | None:intergenic | 35.0% | |
| TCTGTTGAAACTTGAAAGGT+GGG | + | chr4.4:14725752-14725771 | None:intergenic | 35.0% | |
| TGCCATAATTCTAAGCTTGT+GGG | - | chr4.4:14727372-14727391 | MS.gene08956:intron | 35.0% | |
| TGGACTAAACAACTACTTTG+AGG | + | chr4.4:14725660-14725679 | None:intergenic | 35.0% | |
| TGGAGCTTAAGAAAAATACC+GGG | + | chr4.4:14724824-14724843 | None:intergenic | 35.0% | |
| TGTCTCTGTTGAAACTTGAA+AGG | + | chr4.4:14725756-14725775 | None:intergenic | 35.0% | |
| TTAGCCTGCAAAATGAAGAT+GGG | - | chr4.4:14724764-14724783 | MS.gene08956:intron | 35.0% | |
| TTCTCAATAGAGAGCTGTAT+TGG | - | chr4.4:14727857-14727876 | MS.gene08956:intron | 35.0% | |
| ! | AATGAAGATGGGTCTTTTTC+AGG | - | chr4.4:14724775-14724794 | MS.gene08956:intron | 35.0% |
| ! | ATGTTGATGAGGTTGTTTCA+TGG | - | chr4.4:14724229-14724248 | MS.gene08956:intron | 35.0% |
| ! | ATTTTCAGTTTTCTGCTGTG+TGG | - | chr4.4:14726608-14726627 | MS.gene08956:intron | 35.0% |
| ! | TTACCACCTTACTGCATTTT+TGG | - | chr4.4:14724861-14724880 | MS.gene08956:intron | 35.0% |
| ! | TTCAAGTTTAGGTTCATTGC+TGG | - | chr4.4:14726763-14726782 | MS.gene08956:intron | 35.0% |
| ! | TTTTCAGTTTTCTGCTGTGT+GGG | - | chr4.4:14726609-14726628 | MS.gene08956:intron | 35.0% |
| !! | AAAAACATGGATGGTGGATT+TGG | - | chr4.4:14725005-14725024 | MS.gene08956:intron | 35.0% |
| !! | AACTGATTGTATGGTTCTGA+AGG | - | chr4.4:14726130-14726149 | MS.gene08956:intron | 35.0% |
| !! | ATCCATCGACTTGTTATCTT+AGG | - | chr4.4:14724892-14724911 | MS.gene08956:intron | 35.0% |
| !! | ATGAAGATGGGTCTTTTTCA+GGG | - | chr4.4:14724776-14724795 | MS.gene08956:intron | 35.0% |
| !! | GTTCTGAAGGCAACAATTAA+TGG | - | chr4.4:14726143-14726162 | MS.gene08956:intron | 35.0% |
| !! | TTACACAGAAAGTGCTACAT+GGG | - | chr4.4:14727761-14727780 | MS.gene08956:CDS | 35.0% |
| !! | TTTACACAGAAAGTGCTACA+TGG | - | chr4.4:14727760-14727779 | MS.gene08956:CDS | 35.0% |
| !! | TTTTCAAGAAGATGAGGTGA+GGG | - | chr4.4:14726065-14726084 | MS.gene08956:CDS | 35.0% |
| !!! | GTCTTTTTCAGGGGATATAT+GGG | - | chr4.4:14724786-14724805 | MS.gene08956:intron | 35.0% |
| !!! | GTGTCTTTTTCAAGAAGATG+AGG | - | chr4.4:14726059-14726078 | MS.gene08956:CDS | 35.0% |
| !!! | TCTTTTTCAGGGGATATATG+GGG | - | chr4.4:14724787-14724806 | MS.gene08956:intron | 35.0% |
| !!! | TTTTGGGGTTCCTATCAAAT+TGG | + | chr4.4:14725199-14725218 | None:intergenic | 35.0% |
| !!! | TTTTTCAAGAAGATGAGGTG+AGG | - | chr4.4:14726064-14726083 | MS.gene08956:CDS | 35.0% |
| AAAAATCTACCTGAACTGGC+TGG | - | chr4.4:14728035-14728054 | MS.gene08956:intron | 40.0% | |
| AAAGTTTATCTTGGACTGCC+AGG | - | chr4.4:14726917-14726936 | MS.gene08956:intron | 40.0% | |
| AACTGCAGGATTTGTAGTTG+TGG | + | chr4.4:14728159-14728178 | None:intergenic | 40.0% | |
| AATCCGATTGACAACGTCTA+CGG | + | chr4.4:14728745-14728764 | None:intergenic | 40.0% | |
| ACCTGGCAAGATCTAAAAAC+TGG | + | chr4.4:14726822-14726841 | None:intergenic | 40.0% | |
| AGGAAAAGCAATGCTTCACA+AGG | + | chr4.4:14726588-14726607 | None:intergenic | 40.0% | |
| AGTCCAAAAATGCAGTAAGG+TGG | + | chr4.4:14724867-14724886 | None:intergenic | 40.0% | |
| ATCAACCATAGGTTCAAGCA+TGG | - | chr4.4:14728060-14728079 | MS.gene08956:intron | 40.0% | |
| ATCAGTTGTCACCACTTTGA+TGG | - | chr4.4:14724255-14724274 | MS.gene08956:intron | 40.0% | |
| ATGGAACATCTCAGGATGAA+TGG | - | chr4.4:14724153-14724172 | MS.gene08956:intron | 40.0% | |
| ATTGTCAGGAAAGGATAGAC+AGG | + | chr4.4:14728611-14728630 | None:intergenic | 40.0% | |
| CACAAACCAAAACATGAAGC+AGG | + | chr4.4:14727339-14727358 | None:intergenic | 40.0% | |
| CCAAGCGACGTAATATTGAT+AGG | + | chr4.4:14724941-14724960 | None:intergenic | 40.0% | |
| CCTATCAATATTACGTCGCT+TGG | - | chr4.4:14724938-14724957 | MS.gene08956:intron | 40.0% | |
| CGGAAATGACAATGCTATGA+TGG | - | chr4.4:14728233-14728252 | MS.gene08956:intron | 40.0% | |
| CGTGAACCAAGTATCTCAAA+AGG | - | chr4.4:14727520-14727539 | MS.gene08956:intron | 40.0% | |
| CTAAACTAGACCACCCAAAT+TGG | + | chr4.4:14726384-14726403 | None:intergenic | 40.0% | |
| CTAAAGTGTGGACAATGCAT+AGG | - | chr4.4:14727396-14727415 | MS.gene08956:intron | 40.0% | |
| CTAGCCTGATCATGATTGAT+AGG | - | chr4.4:14726865-14726884 | MS.gene08956:intron | 40.0% | |
| CTATGCATTGTCCACACTTT+AGG | + | chr4.4:14727398-14727417 | None:intergenic | 40.0% | |
| CTCCATGGCATTTGTATGAT+TGG | + | chr4.4:14727788-14727807 | None:intergenic | 40.0% | |
| CTCTGTTGAAACTTGAAAGG+TGG | + | chr4.4:14725753-14725772 | None:intergenic | 40.0% | |
| CTTGTTGACAAGGACTTACT+TGG | - | chr4.4:14726660-14726679 | MS.gene08956:intron | 40.0% | |
| CTTTCTGGACATATTGTTGC+TGG | + | chr4.4:14725503-14725522 | None:intergenic | 40.0% | |
| GAACACATTGAATGAAGCAG+TGG | - | chr4.4:14726211-14726230 | MS.gene08956:intron | 40.0% | |
| GAACCCTATCAATCATGATC+AGG | + | chr4.4:14726872-14726891 | None:intergenic | 40.0% | |
| GAACGATACAATAGCAGTAG+AGG | - | chr4.4:14725292-14725311 | MS.gene08956:intron | 40.0% | |
| GAATCAAACATGAGACCTTG+AGG | + | chr4.4:14726352-14726371 | None:intergenic | 40.0% | |
| GACACTGAAATTCTAGCGTA+AGG | - | chr4.4:14727707-14727726 | MS.gene08956:CDS | 40.0% | |
| GACTATGAGAAATTGGTAGG+TGG | - | chr4.4:14726090-14726109 | MS.gene08956:CDS | 40.0% | |
| GAGACAACCATTTGGATTGA+AGG | - | chr4.4:14725854-14725873 | MS.gene08956:CDS | 40.0% | |
| GAGGGAAGACTATGAGAAAT+TGG | - | chr4.4:14726083-14726102 | MS.gene08956:CDS | 40.0% | |
| GCAGTCAATACAACACAACA+TGG | + | chr4.4:14726428-14726447 | None:intergenic | 40.0% | |
| GCATTCTTCATGAAACCTAG+TGG | - | chr4.4:14727303-14727322 | MS.gene08956:intron | 40.0% | |
| GTCACTAGATCTTGTTGACA+AGG | - | chr4.4:14726650-14726669 | MS.gene08956:intron | 40.0% | |
| GTCCCTTATGAGTTTATAGG+TGG | - | chr4.4:14727898-14727917 | MS.gene08956:intron | 40.0% | |
| GTCTCATGTTTGATTCTCTC+CGG | - | chr4.4:14726356-14726375 | MS.gene08956:intron | 40.0% | |
| GTTAAATCTGGAGGTCTGAA+TGG | - | chr4.4:14726705-14726724 | MS.gene08956:intron | 40.0% | |
| TACATAAGGCCGGTAAAGAT+TGG | + | chr4.4:14724636-14724655 | None:intergenic | 40.0% | |
| TAGCCAAGTGATGACTAACA+AGG | - | chr4.4:14725998-14726017 | MS.gene08956:intron | 40.0% | |
| TCAGTTGTCACCACTTTGAT+GGG | - | chr4.4:14724256-14724275 | MS.gene08956:intron | 40.0% | |
| TCATGATTGATAGGGTTCAC+TGG | - | chr4.4:14726874-14726893 | MS.gene08956:intron | 40.0% | |
| TCATTTGGTCATAGAGGCTT+TGG | - | chr4.4:14727489-14727508 | MS.gene08956:intron | 40.0% | |
| TGAGCTATAGATCCAAGTGT+TGG | - | chr4.4:14726167-14726186 | MS.gene08956:intron | 40.0% | |
| TGAGTTCCCTTCAATCCAAA+TGG | + | chr4.4:14725864-14725883 | None:intergenic | 40.0% | |
| TGTGAGCGACAAGTTAAATC+TGG | - | chr4.4:14726693-14726712 | MS.gene08956:intron | 40.0% | |
| TGTTACGAGCCTGTTTGAAT+TGG | - | chr4.4:14724435-14724454 | MS.gene08956:intron | 40.0% | |
| TGTTAGGACACAGAAAATGG+TGG | - | chr4.4:14727045-14727064 | MS.gene08956:intron | 40.0% | |
| TTAACTGCCCTTGATCTTCT+CGG | - | chr4.4:14724189-14724208 | MS.gene08956:intron | 40.0% | |
| TTGACAAGGACTTACTTGGT+TGG | - | chr4.4:14726664-14726683 | MS.gene08956:intron | 40.0% | |
| TTGTCAGGAAAGGATAGACA+GGG | + | chr4.4:14728610-14728629 | None:intergenic | 40.0% | |
| ! | AAGACCCATCTTCATTTTGC+AGG | + | chr4.4:14724771-14724790 | None:intergenic | 40.0% |
| ! | ATATTGTCGGCTAGTCATTC+CGG | + | chr4.4:14726257-14726276 | None:intergenic | 40.0% |
| ! | CAATTTGGGTGGTCTAGTTT+AGG | - | chr4.4:14726382-14726401 | MS.gene08956:intron | 40.0% |
| ! | CTATCATACATACTTTGGGG+TGG | - | chr4.4:14727101-14727120 | MS.gene08956:intron | 40.0% |
| ! | GAGATGATGGTTAAACCTAC+CGG | - | chr4.4:14726235-14726254 | MS.gene08956:intron | 40.0% |
| ! | GAGTTTTCCGAGAAGATCAA+GGG | + | chr4.4:14724199-14724218 | None:intergenic | 40.0% |
| ! | GCAGCTCTTGTTTGATAATC+AGG | + | chr4.4:14725610-14725629 | None:intergenic | 40.0% |
| ! | GTTAGCCTGCAAAATGAAGA+TGG | - | chr4.4:14724763-14724782 | MS.gene08956:intron | 40.0% |
| ! | TTATGTGGTTTGGGTTTGTG+TGG | - | chr4.4:14728323-14728342 | MS.gene08956:intron | 40.0% |
| ! | TTGTTGCCTGCTTCATGTTT+TGG | - | chr4.4:14727330-14727349 | MS.gene08956:intron | 40.0% |
| ! | TTTAGGTTCATTGCTGGAGA+TGG | - | chr4.4:14726769-14726788 | MS.gene08956:intron | 40.0% |
| ! | TTTCAGTTTTCTGCTGTGTG+GGG | - | chr4.4:14726610-14726629 | MS.gene08956:intron | 40.0% |
| !! | ACCAGTTTTTAGATCTTGCC+AGG | - | chr4.4:14726818-14726837 | MS.gene08956:intron | 40.0% |
| !! | ACTGATAAGAAGCGTTGATC+GGG | - | chr4.4:14728363-14728382 | MS.gene08956:intron | 40.0% |
| !! | ATGAGAAAGAGAGAGGTGTT+GGG | + | chr4.4:14727197-14727216 | None:intergenic | 40.0% |
| !! | CACTGATAAGAAGCGTTGAT+CGG | - | chr4.4:14728362-14728381 | MS.gene08956:intron | 40.0% |
| !! | CTATAGATCCAAGTGTTGGA+AGG | - | chr4.4:14726171-14726190 | MS.gene08956:intron | 40.0% |
| !! | TAACGCTGCTGTTTCAACAA+AGG | + | chr4.4:14725970-14725989 | None:intergenic | 40.0% |
| !! | TACACAGAAAGTGCTACATG+GGG | - | chr4.4:14727762-14727781 | MS.gene08956:CDS | 40.0% |
| !! | TTGTATTGACTGCTCACTCA+AGG | - | chr4.4:14726435-14726454 | MS.gene08956:intron | 40.0% |
| !!! | CTCTTTTTTGATGGGCTCTT+AGG | - | chr4.4:14725829-14725848 | MS.gene08956:CDS | 40.0% |
| !!! | GGTCTTTTTCAGGGGATATA+TGG | - | chr4.4:14724785-14724804 | MS.gene08956:intron | 40.0% |
| !!! | TGAAGATGGGTCTTTTTCAG+GGG | - | chr4.4:14724777-14724796 | MS.gene08956:intron | 40.0% |
| AAAGCATAAGCCGGGTCTAT+CGG | + | chr4.4:14728720-14728739 | None:intergenic | 45.0% | |
| AACCATAGGTTCAAGCATGG+TGG | - | chr4.4:14728063-14728082 | MS.gene08956:intron | 45.0% | |
| AACCCACTTGGGTTACAACA+TGG | + | chr4.4:14726289-14726308 | None:intergenic | 45.0% | |
| ACAAGGACTTACTTGGTTGG+TGG | - | chr4.4:14726667-14726686 | MS.gene08956:intron | 45.0% | |
| ACTGGCTGGATATCAACCAT+AGG | - | chr4.4:14728049-14728068 | MS.gene08956:intron | 45.0% | |
| AGCTGCAAAAACATGGATGG+TGG | - | chr4.4:14724999-14725018 | MS.gene08956:intron | 45.0% | |
| AGGATGAATGGAGCATACTG+GGG | - | chr4.4:14724165-14724184 | MS.gene08956:intron | 45.0% | |
| AGTTGTCACCACTTTGATGG+GGG | - | chr4.4:14724258-14724277 | MS.gene08956:intron | 45.0% | |
| ATCCGATTGACAACGTCTAC+GGG | + | chr4.4:14728744-14728763 | None:intergenic | 45.0% | |
| ATGAAGCAGTGGTGAGATGA+TGG | - | chr4.4:14726222-14726241 | MS.gene08956:intron | 45.0% | |
| ATGTTGTAACCCAAGTGGGT+TGG | - | chr4.4:14726288-14726307 | MS.gene08956:intron | 45.0% | |
| CAGGATGAATGGAGCATACT+GGG | - | chr4.4:14724164-14724183 | MS.gene08956:intron | 45.0% | |
| CAGTTGTCACCACTTTGATG+GGG | - | chr4.4:14724257-14724276 | MS.gene08956:intron | 45.0% | |
| CGGCACTTGAACTGATTGTA+TGG | - | chr4.4:14726121-14726140 | MS.gene08956:CDS | 45.0% | |
| CTTAGGTCGAGACAACCATT+TGG | - | chr4.4:14725846-14725865 | MS.gene08956:CDS | 45.0% | |
| GAGCGACAAGTTAAATCTGG+AGG | - | chr4.4:14726696-14726715 | MS.gene08956:intron | 45.0% | |
| GCAGGCAACAAAAAACCACT+AGG | + | chr4.4:14727321-14727340 | None:intergenic | 45.0% | |
| GCTCCTTGTTAGTCATCACT+TGG | + | chr4.4:14726004-14726023 | None:intergenic | 45.0% | |
| GGCCAATCATACAAATGCCA+TGG | - | chr4.4:14727783-14727802 | MS.gene08956:CDS | 45.0% | |
| GGCCCACAAGCTTAGAATTA+TGG | + | chr4.4:14727377-14727396 | None:intergenic | 45.0% | |
| GGGCTTGGGACAAGTTAATA+GGG | + | chr4.4:14725732-14725751 | None:intergenic | 45.0% | |
| GTATCCTTTGACACGTGTGT+TGG | - | chr4.4:14724394-14724413 | MS.gene08956:intron | 45.0% | |
| GTGCTCGTCTTATGTGGTTT+GGG | - | chr4.4:14728314-14728333 | MS.gene08956:intron | 45.0% | |
| TACCCGTAGACGTTGTCAAT+CGG | - | chr4.4:14728739-14728758 | MS.gene08956:CDS | 45.0% | |
| TAGACATCCACAGCATCATC+CGG | + | chr4.4:14727084-14727103 | None:intergenic | 45.0% | |
| TAGGGTTCACTGGATCAGTA+AGG | - | chr4.4:14726884-14726903 | MS.gene08956:intron | 45.0% | |
| TAGTGACCCCGTTATAGCAA+GGG | + | chr4.4:14726637-14726656 | None:intergenic | 45.0% | |
| TCAAACATGAGACCTTGAGG+AGG | + | chr4.4:14726349-14726368 | None:intergenic | 45.0% | |
| TCAGGATGAATGGAGCATAC+TGG | - | chr4.4:14724163-14724182 | MS.gene08956:intron | 45.0% | |
| TCTACGGGTAAAGCATAAGC+CGG | + | chr4.4:14728729-14728748 | None:intergenic | 45.0% | |
| TGAACCAACACACGTGTCAA+AGG | + | chr4.4:14724401-14724420 | None:intergenic | 45.0% | |
| TGCCATGTTGTAACCCAAGT+GGG | - | chr4.4:14726284-14726303 | MS.gene08956:intron | 45.0% | |
| TGGACTGCCAGGTTATTTAG+TGG | - | chr4.4:14726928-14726947 | MS.gene08956:intron | 45.0% | |
| TGGGCTTGGGACAAGTTAAT+AGG | + | chr4.4:14725733-14725752 | None:intergenic | 45.0% | |
| TGGTGGAATTTCAGACAGAC+CGG | - | chr4.4:14727062-14727081 | MS.gene08956:intron | 45.0% | |
| TTATGGCCAAAGGAAGTCAC+TGG | + | chr4.4:14727262-14727281 | None:intergenic | 45.0% | |
| TTGCCATGTTGTAACCCAAG+TGG | - | chr4.4:14726283-14726302 | MS.gene08956:intron | 45.0% | |
| ! | ATTCTCTCCGGTGCCAATTT+GGG | - | chr4.4:14726368-14726387 | MS.gene08956:intron | 45.0% |
| ! | CATGAGAAAGAGAGAGGTGT+TGG | + | chr4.4:14727198-14727217 | None:intergenic | 45.0% |
| ! | CGAGTTTTCCGAGAAGATCA+AGG | + | chr4.4:14724200-14724219 | None:intergenic | 45.0% |
| ! | GAAACTTGAAAGGTGGGCTT+GGG | + | chr4.4:14725746-14725765 | None:intergenic | 45.0% |
| ! | TGAAACTTGAAAGGTGGGCT+TGG | + | chr4.4:14725747-14725766 | None:intergenic | 45.0% |
| ! | TTCAGTTTTCTGCTGTGTGG+GGG | - | chr4.4:14726611-14726630 | MS.gene08956:intron | 45.0% |
| !! | AAGTTGGTGCTCGTCTTATG+TGG | - | chr4.4:14728308-14728327 | MS.gene08956:intron | 45.0% |
| !! | CCTATATGAAGTGCTGTGTG+CGG | - | chr4.4:14725166-14725185 | MS.gene08956:intron | 45.0% |
| !! | CGTGTGTTGGTTCACTTTGA+AGG | - | chr4.4:14724407-14724426 | MS.gene08956:intron | 45.0% |
| !! | CTATATGAAGTGCTGTGTGC+GGG | - | chr4.4:14725167-14725186 | MS.gene08956:intron | 45.0% |
| !! | CTGATAAGAAGCGTTGATCG+GGG | - | chr4.4:14728364-14728383 | MS.gene08956:intron | 45.0% |
| !! | CTGCTGTTTCAACAAAGGCA+GGG | + | chr4.4:14725965-14725984 | None:intergenic | 45.0% |
| !! | CTGTGGTAATGGAACATCTC+AGG | - | chr4.4:14724145-14724164 | MS.gene08956:intron | 45.0% |
| !! | TATGGGGTGAAGTTGATACC+CGG | - | chr4.4:14724803-14724822 | MS.gene08956:intron | 45.0% |
| !! | TCAAGCATGGTGGTGGAAAT+GGG | - | chr4.4:14728073-14728092 | MS.gene08956:intron | 45.0% |
| !! | TGAGAAAGAGAGAGGTGTTG+GGG | + | chr4.4:14727196-14727215 | None:intergenic | 45.0% |
| !! | TTCAAGCATGGTGGTGGAAA+TGG | - | chr4.4:14728072-14728091 | MS.gene08956:intron | 45.0% |
| !!! | TTTTTTTTTTTTAAATATTC+TGG | - | chr4.4:14724707-14724726 | MS.gene08956:intron | 5.0% |
| AAGCTTGTGGGCCTAAAGTG+TGG | - | chr4.4:14727384-14727403 | MS.gene08956:intron | 50.0% | |
| ATTTGGTTGCACACCTGGTG+GGG | - | chr4.4:14725022-14725041 | MS.gene08956:intron | 50.0% | |
| CACCACCATGCTTGAACCTA+TGG | + | chr4.4:14728068-14728087 | None:intergenic | 50.0% | |
| CACTGACCAGTGACTTCCTT+TGG | - | chr4.4:14727253-14727272 | MS.gene08956:intron | 50.0% | |
| CACTTTGATGGGGGATTTGC+TGG | - | chr4.4:14724267-14724286 | MS.gene08956:intron | 50.0% | |
| CAGCAAATCCCCCATCAAAG+TGG | + | chr4.4:14724269-14724288 | None:intergenic | 50.0% | |
| CATAGGTTCAAGCATGGTGG+TGG | - | chr4.4:14728066-14728085 | MS.gene08956:intron | 50.0% | |
| CCAGGTATGCTACTCATGGT+GGG | - | chr4.4:14726836-14726855 | MS.gene08956:intron | 50.0% | |
| CCGCACACAGCACTTCATAT+AGG | + | chr4.4:14725169-14725188 | None:intergenic | 50.0% | |
| CGACACCGTAGATGTTGATG+AGG | - | chr4.4:14724218-14724237 | MS.gene08956:intron | 50.0% | |
| CTACGGGTAAAGCATAAGCC+GGG | + | chr4.4:14728728-14728747 | None:intergenic | 50.0% | |
| CTAGTGACCCCGTTATAGCA+AGG | + | chr4.4:14726638-14726657 | None:intergenic | 50.0% | |
| CTCACATCAGGGAGTTTCTC+TGG | + | chr4.4:14726735-14726754 | None:intergenic | 50.0% | |
| CTTGCCAGGTATGCTACTCA+TGG | - | chr4.4:14726832-14726851 | MS.gene08956:intron | 50.0% | |
| GACTAGGCAGAAGACGTCTT+GGG | + | chr4.4:14725464-14725483 | None:intergenic | 50.0% | |
| GAGCGCATGGTGACTAAGTT+TGG | - | chr4.4:14727811-14727830 | MS.gene08956:CDS | 50.0% | |
| GGTGCTCGTCTTATGTGGTT+TGG | - | chr4.4:14728313-14728332 | MS.gene08956:intron | 50.0% | |
| TAGACCACCCAAATTGGCAC+CGG | + | chr4.4:14726378-14726397 | None:intergenic | 50.0% | |
| TGACTAGGCAGAAGACGTCT+TGG | + | chr4.4:14725465-14725484 | None:intergenic | 50.0% | |
| TGGAGTGAAACCGATAGACC+CGG | - | chr4.4:14728707-14728726 | MS.gene08956:intron | 50.0% | |
| ! | CGGGTTAGGGCCAATTTGAT+AGG | - | chr4.4:14725186-14725205 | MS.gene08956:intron | 50.0% |
| ! | GATTCTCTCCGGTGCCAATT+TGG | - | chr4.4:14726367-14726386 | MS.gene08956:intron | 50.0% |
| ! | GATTTGGTTGCACACCTGGT+GGG | - | chr4.4:14725021-14725040 | MS.gene08956:intron | 50.0% |
| ! | GGTTGATATCCAGCCAGTTC+AGG | + | chr4.4:14728047-14728066 | None:intergenic | 50.0% |
| ! | TTGTGTCGGAGCTTAGCTCT+GGG | + | chr4.4:14725332-14725351 | None:intergenic | 50.0% |
| !! | ATAAGAAGCGTTGATCGGGG+TGG | - | chr4.4:14728367-14728386 | MS.gene08956:intron | 50.0% |
| !! | CAAGCATGGTGGTGGAAATG+GGG | - | chr4.4:14728074-14728093 | MS.gene08956:intron | 50.0% |
| !! | CATACATACTTTGGGGTGGC+TGG | - | chr4.4:14727105-14727124 | MS.gene08956:intron | 50.0% |
| !! | CCAAGTGTTGGAAGGTCACA+CGG | - | chr4.4:14726179-14726198 | MS.gene08956:intron | 50.0% |
| !! | CTCTCTCACTTTTACGCTGC+TGG | - | chr4.4:14728518-14728537 | MS.gene08956:CDS | 50.0% |
| !! | GCTGCTGTTTCAACAAAGGC+AGG | + | chr4.4:14725966-14725985 | None:intergenic | 50.0% |
| !! | GGGGGATTTGCTGGAAATGT+TGG | - | chr4.4:14724276-14724295 | MS.gene08956:intron | 50.0% |
| !! | GTGGTGTTGGCTTGAGATCT+TGG | - | chr4.4:14726315-14726334 | MS.gene08956:intron | 50.0% |
| AGACAGACCGGATGATGCTG+TGG | - | chr4.4:14727074-14727093 | MS.gene08956:intron | 55.0% | |
| CACCATGCGCTCTATCTCCA+TGG | + | chr4.4:14727803-14727822 | None:intergenic | 55.0% | |
| CCCACCATGAGTAGCATACC+TGG | + | chr4.4:14726839-14726858 | None:intergenic | 55.0% | |
| CCGTGTGACCTTCCAACACT+TGG | + | chr4.4:14726182-14726201 | None:intergenic | 55.0% | |
| GATCTCAAGCCAACACCACC+AGG | + | chr4.4:14726314-14726333 | None:intergenic | 55.0% | |
| GCCAGGTATGCTACTCATGG+TGG | - | chr4.4:14726835-14726854 | MS.gene08956:intron | 55.0% | |
| GTTGTGTCGGAGCTTAGCTC+TGG | + | chr4.4:14725333-14725352 | None:intergenic | 55.0% | |
| TGCCATGGAGATAGAGCGCA+TGG | - | chr4.4:14727798-14727817 | MS.gene08956:CDS | 55.0% | |
| TTGGAGTGTGCTCCTCCTCA+AGG | - | chr4.4:14726334-14726353 | MS.gene08956:intron | 55.0% | |
| ! | GGATTTGGTTGCACACCTGG+TGG | - | chr4.4:14725020-14725039 | MS.gene08956:intron | 55.0% |
| ! | GGTGGATTTGGTTGCACACC+TGG | - | chr4.4:14725017-14725036 | MS.gene08956:intron | 55.0% |
| ! | TGTCGGCTAGTCATTCCGGT+AGG | + | chr4.4:14726253-14726272 | None:intergenic | 55.0% |
| ! | TGTGGGGGCCCTTGCTATAA+CGG | - | chr4.4:14726626-14726645 | MS.gene08956:intron | 55.0% |
| !! | ATTGGTAGGTGGGCTGCAGA+CGG | - | chr4.4:14726101-14726120 | MS.gene08956:CDS | 55.0% |
| !! | GAAGTGCTGTGTGCGGGTTA+GGG | - | chr4.4:14725173-14725192 | MS.gene08956:intron | 55.0% |
| !! | GGGTCTATCGGTTTCACTCC+AGG | + | chr4.4:14728708-14728727 | None:intergenic | 55.0% |
| !! | TGAAGTGCTGTGTGCGGGTT+AGG | - | chr4.4:14725172-14725191 | MS.gene08956:intron | 55.0% |
| ACCACCAGGCCAACCCACTT+GGG | + | chr4.4:14726300-14726319 | None:intergenic | 60.0% | |
| CCAGCATGAGATTCCCCACC+AGG | + | chr4.4:14725038-14725057 | None:intergenic | 60.0% | |
| CCTGGTGGGGAATCTCATGC+TGG | - | chr4.4:14725035-14725054 | MS.gene08956:intron | 60.0% | |
| ! | CTCTCCGGTGCCAATTTGGG+TGG | - | chr4.4:14726371-14726390 | MS.gene08956:intron | 60.0% |
| ! | GTGGGGGCCCTTGCTATAAC+GGG | - | chr4.4:14726627-14726646 | MS.gene08956:intron | 60.0% |
| ! | TGGGGGCCCTTGCTATAACG+GGG | - | chr4.4:14726628-14726647 | MS.gene08956:intron | 60.0% |
| !! | GTAACCCAAGTGGGTTGGCC+TGG | - | chr4.4:14726293-14726312 | MS.gene08956:intron | 60.0% |
| CACCACCAGGCCAACCCACT+TGG | + | chr4.4:14726301-14726320 | None:intergenic | 65.0% | |
| !! | ACCCAAGTGGGTTGGCCTGG+TGG | - | chr4.4:14726296-14726315 | MS.gene08956:intron | 65.0% |
| !! | GTGGGTTGGCCTGGTGGTGT+TGG | - | chr4.4:14726302-14726321 | MS.gene08956:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 14723984 | 14728779 | 14723984 | ID=MS.gene08956 |
| chr4.4 | mRNA | 14723984 | 14728779 | 14723984 | ID=MS.gene08956.t1;Parent=MS.gene08956 |
| chr4.4 | exon | 14728726 | 14728779 | 14728726 | ID=MS.gene08956.t1.exon1;Parent=MS.gene08956.t1 |
| chr4.4 | CDS | 14728726 | 14728779 | 14728726 | ID=cds.MS.gene08956.t1;Parent=MS.gene08956.t1 |
| chr4.4 | exon | 14728370 | 14728637 | 14728370 | ID=MS.gene08956.t1.exon2;Parent=MS.gene08956.t1 |
| chr4.4 | CDS | 14728370 | 14728637 | 14728370 | ID=cds.MS.gene08956.t1;Parent=MS.gene08956.t1 |
| chr4.4 | exon | 14727939 | 14728005 | 14727939 | ID=MS.gene08956.t1.exon3;Parent=MS.gene08956.t1 |
| chr4.4 | CDS | 14727939 | 14728005 | 14727939 | ID=cds.MS.gene08956.t1;Parent=MS.gene08956.t1 |
| chr4.4 | exon | 14727701 | 14727849 | 14727701 | ID=MS.gene08956.t1.exon4;Parent=MS.gene08956.t1 |
| chr4.4 | CDS | 14727701 | 14727849 | 14727701 | ID=cds.MS.gene08956.t1;Parent=MS.gene08956.t1 |
| chr4.4 | exon | 14726014 | 14726147 | 14726014 | ID=MS.gene08956.t1.exon5;Parent=MS.gene08956.t1 |
| chr4.4 | CDS | 14726014 | 14726147 | 14726014 | ID=cds.MS.gene08956.t1;Parent=MS.gene08956.t1 |
| chr4.4 | exon | 14725825 | 14725923 | 14725825 | ID=MS.gene08956.t1.exon6;Parent=MS.gene08956.t1 |
| chr4.4 | CDS | 14725825 | 14725923 | 14725825 | ID=cds.MS.gene08956.t1;Parent=MS.gene08956.t1 |
| chr4.4 | exon | 14725637 | 14725712 | 14725637 | ID=MS.gene08956.t1.exon7;Parent=MS.gene08956.t1 |
| chr4.4 | CDS | 14725637 | 14725712 | 14725637 | ID=cds.MS.gene08956.t1;Parent=MS.gene08956.t1 |
| chr4.4 | exon | 14723984 | 14724078 | 14723984 | ID=MS.gene08956.t1.exon8;Parent=MS.gene08956.t1 |
| chr4.4 | CDS | 14723984 | 14724078 | 14723984 | ID=cds.MS.gene08956.t1;Parent=MS.gene08956.t1 |
| Gene Sequence |
| Protein sequence |
