Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09288.t1 | XP_024629075.1 | 98.4 | 313 | 5 | 0 | 1 | 313 | 1 | 313 | 1.10E-102 | 383.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09288.t1 | Q84J75 | 87.5 | 313 | 39 | 0 | 1 | 313 | 9 | 321 | 4.3e-87 | 322.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09288.t1 | A0A396GUS6 | 98.4 | 313 | 5 | 0 | 1 | 313 | 1 | 313 | 8.0e-103 | 383.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene09288 | MS.gene065113 | PPI |
| MS.gene09288 | MS.gene08800 | PPI |
| MS.gene09288 | MS.gene020444 | PPI |
| MS.gene09288 | MS.gene37916 | PPI |
| MS.gene09288 | MS.gene023504 | PPI |
| MS.gene09288 | MS.gene013090 | PPI |
| MS.gene09288 | MS.gene76283 | PPI |
| MS.gene09288 | MS.gene029385 | PPI |
| MS.gene09288 | MS.gene71852 | PPI |
| MS.gene09288 | MS.gene08956 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09288.t1 | MTR_1g111160 | 92.332 | 313 | 24 | 0 | 1 | 313 | 1 | 313 | 0.0 | 597 |
| MS.gene09288.t1 | MTR_1g111160 | 90.311 | 289 | 28 | 0 | 1 | 289 | 1 | 289 | 0.0 | 538 |
| MS.gene09288.t1 | MTR_1g111160 | 91.829 | 257 | 21 | 0 | 1 | 257 | 1 | 257 | 6.16e-176 | 487 |
| MS.gene09288.t1 | MTR_1g111160 | 27.500 | 160 | 116 | 0 | 103 | 262 | 7 | 166 | 5.95e-16 | 76.6 |
| MS.gene09288.t1 | MTR_1g111160 | 88.889 | 252 | 28 | 0 | 1 | 252 | 1 | 252 | 5.85e-166 | 461 |
| MS.gene09288.t1 | MTR_1g111160 | 27.500 | 160 | 116 | 0 | 103 | 262 | 7 | 166 | 6.92e-16 | 76.3 |
| MS.gene09288.t1 | MTR_7g024540 | 31.410 | 312 | 174 | 7 | 21 | 295 | 33 | 341 | 8.58e-42 | 148 |
| MS.gene09288.t1 | MTR_6g007165 | 30.657 | 274 | 179 | 4 | 1 | 270 | 44 | 310 | 1.12e-34 | 131 |
| MS.gene09288.t1 | MTR_8g085230 | 94.286 | 35 | 2 | 0 | 279 | 313 | 24 | 58 | 1.01e-15 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene09288.t1 | AT5G12210 | 80.511 | 313 | 61 | 0 | 1 | 313 | 9 | 321 | 0.0 | 523 |
| MS.gene09288.t1 | AT3G12070 | 79.299 | 314 | 62 | 2 | 3 | 313 | 4 | 317 | 0.0 | 521 |
| MS.gene09288.t1 | AT3G12070 | 79.299 | 314 | 62 | 2 | 3 | 313 | 4 | 317 | 0.0 | 521 |
| MS.gene09288.t1 | AT3G12070 | 79.299 | 314 | 62 | 2 | 3 | 313 | 4 | 317 | 0.0 | 521 |
| MS.gene09288.t1 | AT5G12210 | 80.192 | 313 | 61 | 1 | 1 | 313 | 9 | 320 | 0.0 | 516 |
| MS.gene09288.t1 | AT3G12070 | 77.876 | 226 | 47 | 2 | 3 | 225 | 4 | 229 | 3.49e-129 | 368 |
| MS.gene09288.t1 | AT2G39550 | 32.362 | 309 | 171 | 6 | 32 | 303 | 62 | 369 | 3.83e-43 | 152 |
| MS.gene09288.t1 | AT5G40280 | 32.864 | 213 | 133 | 4 | 37 | 242 | 113 | 322 | 3.13e-24 | 102 |
| MS.gene09288.t1 | AT5G40280 | 30.120 | 166 | 111 | 2 | 82 | 242 | 189 | 354 | 2.31e-20 | 91.7 |
Find 68 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAGCCTGATCATGATTGAT+AGG | 0.270530 | 4.1:-14309421 | MS.gene09288:CDS |
| ATGTCTATCATACATACTTT+GGG | 0.346369 | 4.1:-14309189 | MS.gene09288:CDS |
| GAAGCTTATAAAGTTTATCT+TGG | 0.359856 | 4.1:-14309378 | MS.gene09288:CDS |
| GGTGGATTTGGTTGCACACC+TGG | 0.360124 | 4.1:-14311269 | MS.gene09288:CDS |
| CTCACATCAGGGAGTTTCTC+TGG | 0.361859 | 4.1:+14309554 | None:intergenic |
| TCAGGATGAATGGAGCATAC+TGG | 0.362998 | 4.1:-14312121 | MS.gene09288:CDS |
| AACTGTTAGGACACAGAAAA+TGG | 0.374598 | 4.1:-14309244 | MS.gene09288:intron |
| CTTGTTGACAAGGACTTACT+TGG | 0.380516 | 4.1:-14309626 | MS.gene09288:CDS |
| GATGTCTATCATACATACTT+TGG | 0.407924 | 4.1:-14309190 | MS.gene09288:CDS |
| TCATCTTATTGATGTTGATA+AGG | 0.414501 | 4.1:-14311922 | MS.gene09288:CDS |
| CAGGATGAATGGAGCATACT+GGG | 0.420427 | 4.1:-14312120 | MS.gene09288:CDS |
| CTTTCACTTCTTGAATATCC+TGG | 0.427177 | 4.1:-14307608 | MS.gene09288:CDS |
| CCAAGCGACGTAATATTGAT+AGG | 0.429921 | 4.1:+14311348 | None:intergenic |
| TTAACTGCCCTTGATCTTCT+CGG | 0.431904 | 4.1:-14312095 | MS.gene09288:CDS |
| TGTGAGCGACAAGTTAAATC+TGG | 0.432622 | 4.1:-14309593 | MS.gene09288:CDS |
| ATCAGTTGTCACCACGATGA+TGG | 0.437364 | 4.1:-14312029 | MS.gene09288:CDS |
| TACCCGTAGACGTTGTCAAT+CGG | 0.440295 | 4.1:-14307556 | MS.gene09288:CDS |
| ATGTTGATGAGGTTGTTTCA+TGG | 0.447603 | 4.1:-14312055 | MS.gene09288:CDS |
| AAAGTTTATCTTGGACTGCC+AGG | 0.456260 | 4.1:-14309369 | MS.gene09288:intron |
| CATACATACTTTGGGGTGGC+TGG | 0.466568 | 4.1:-14309181 | MS.gene09288:intron |
| AATCCGATTGACAACGTCTA+CGG | 0.470884 | 4.1:+14307553 | None:intergenic |
| TCAGTTGTCACCACGATGAT+GGG | 0.473093 | 4.1:-14312028 | MS.gene09288:CDS |
| CTGTGGTAATGGAACATCTC+AGG | 0.476418 | 4.1:-14312139 | MS.gene09288:CDS |
| GTTAAATCTGGAGGTCTGAA+TGG | 0.477849 | 4.1:-14309581 | MS.gene09288:CDS |
| ATCCGATTGACAACGTCTAC+GGG | 0.478203 | 4.1:+14307554 | None:intergenic |
| GTTAGCCTGCAAAATGAAGA+TGG | 0.479793 | 4.1:-14311523 | MS.gene09288:CDS |
| GGGTCTATCGGTTTCACTCC+AGG | 0.481923 | 4.1:+14307590 | None:intergenic |
| CCTATCAATATTACGTCGCT+TGG | 0.484014 | 4.1:-14311348 | MS.gene09288:CDS |
| GAACCCTATCAATCATGATC+AGG | 0.489404 | 4.1:+14309417 | None:intergenic |
| ATGGAACATCTCAGGATGAA+TGG | 0.497514 | 4.1:-14312131 | MS.gene09288:CDS |
| TAGCCTGATCATGATTGATA+GGG | 0.498142 | 4.1:-14309420 | MS.gene09288:CDS |
| GATTTGGTTGCACACCTGGT+GGG | 0.498689 | 4.1:-14311265 | MS.gene09288:CDS |
| ATTTGGTTGCACACCTGGTG+GGG | 0.500235 | 4.1:-14311264 | MS.gene09288:CDS |
| CCAGCATGAGATTCCCCACC+AGG | 0.510818 | 4.1:+14311251 | None:intergenic |
| ATATATACTATCAGTTGAAA+AGG | 0.512188 | 4.1:-14312268 | MS.gene09288:intron |
| ACAAGGACTTACTTGGTTGG+TGG | 0.520652 | 4.1:-14309619 | MS.gene09288:CDS |
| GGATTTGGTTGCACACCTGG+TGG | 0.522911 | 4.1:-14311266 | MS.gene09288:CDS |
| TTGACAAGGACTTACTTGGT+TGG | 0.525370 | 4.1:-14309622 | MS.gene09288:CDS |
| GCCAGGTATGCTACTCATGG+TGG | 0.535317 | 4.1:-14309451 | MS.gene09288:intron |
| TCATGATTGATAGGGTTCAC+TGG | 0.538238 | 4.1:-14309412 | MS.gene09288:CDS |
| AAAGCATAAGCCGGGTCTAT+CGG | 0.539627 | 4.1:+14307578 | None:intergenic |
| TAGACATCCACAGCATCATC+CGG | 0.549532 | 4.1:+14309205 | None:intergenic |
| CCAGGTATGCTACTCATGGT+GGG | 0.555106 | 4.1:-14309450 | MS.gene09288:intron |
| GGATAGAATAAATGTGGAGA+AGG | 0.559748 | 4.1:-14311327 | MS.gene09288:CDS |
| TGGTGGAATTTCAGACAGAC+CGG | 0.576594 | 4.1:-14309224 | MS.gene09288:CDS |
| CTTGCCAGGTATGCTACTCA+TGG | 0.581436 | 4.1:-14309454 | MS.gene09288:intron |
| CCTGGTGGGGAATCTCATGC+TGG | 0.582123 | 4.1:-14311251 | MS.gene09288:CDS |
| AACAACCTCATCAACATCTA+CGG | 0.586257 | 4.1:+14312061 | None:intergenic |
| TCTACGGGTAAAGCATAAGC+CGG | 0.595209 | 4.1:+14307569 | None:intergenic |
| CAGTTGTCACCACGATGATG+GGG | 0.596464 | 4.1:-14312027 | MS.gene09288:CDS |
| TAGGGTTCACTGGATCAGTA+AGG | 0.600098 | 4.1:-14309402 | MS.gene09288:CDS |
| TTAGCCTGCAAAATGAAGAT+GGG | 0.605987 | 4.1:-14311522 | MS.gene09288:CDS |
| CTAGTGACCCCGTTATAGCA+AGG | 0.608314 | 4.1:+14309651 | None:intergenic |
| TCGCTTGGATAGAATAAATG+TGG | 0.614658 | 4.1:-14311333 | MS.gene09288:CDS |
| GTCACTAGATCTTGTTGACA+AGG | 0.624947 | 4.1:-14309636 | MS.gene09288:CDS |
| TAGTGACCCCGTTATAGCAA+GGG | 0.631959 | 4.1:+14309652 | None:intergenic |
| CTACGGGTAAAGCATAAGCC+GGG | 0.632140 | 4.1:+14307570 | None:intergenic |
| CTATCATACATACTTTGGGG+TGG | 0.633143 | 4.1:-14309185 | MS.gene09288:CDS |
| AGACAGACCGGATGATGCTG+TGG | 0.645799 | 4.1:-14309212 | MS.gene09288:CDS |
| TGGAGTGAAACCGATAGACC+CGG | 0.648295 | 4.1:-14307588 | MS.gene09288:CDS |
| TGTTAGGACACAGAAAATGG+TGG | 0.653329 | 4.1:-14309241 | MS.gene09288:intron |
| TGTCTATCATACATACTTTG+GGG | 0.654532 | 4.1:-14309188 | MS.gene09288:CDS |
| CGACACCGTAGATGTTGATG+AGG | 0.660761 | 4.1:-14312066 | MS.gene09288:CDS |
| CTGAGTGTATACAAAATGTG+TGG | 0.673916 | 4.1:+14311978 | None:intergenic |
| AGTTGTCACCACGATGATGG+GGG | 0.678776 | 4.1:-14312026 | MS.gene09288:CDS |
| TATGGGGTGAAGTTGATACC+CGG | 0.685066 | 4.1:-14311483 | MS.gene09288:intron |
| AGGATGAATGGAGCATACTG+GGG | 0.699697 | 4.1:-14312119 | MS.gene09288:CDS |
| GAGCGACAAGTTAAATCTGG+AGG | 0.710603 | 4.1:-14309590 | MS.gene09288:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTATTAGAAGAATT+GGG | - | chr4.1:14310996-14311015 | MS.gene09288:intron | 10.0% |
| !!! | TATATTCAAATATCTTTTAA+TGG | + | chr4.1:14311988-14312007 | None:intergenic | 10.0% |
| !!! | TATTTTTTTATTAGAAGAAT+TGG | - | chr4.1:14310995-14311014 | MS.gene09288:intron | 10.0% |
| !! | AACAAAAAAAATCATTAAAG+AGG | - | chr4.1:14309463-14309482 | MS.gene09288:intron | 15.0% |
| !! | AATTCAATTTAACATATAAC+AGG | - | chr4.1:14312108-14312127 | MS.gene09288:CDS | 15.0% |
| !! | ATAACATTCAATATGAAATT+AGG | + | chr4.1:14310978-14310997 | None:intergenic | 15.0% |
| !! | ATTAAAAATGAAACATAGTT+GGG | + | chr4.1:14307622-14307641 | None:intergenic | 15.0% |
| !! | GTTATATGTTAAATTGAATT+GGG | + | chr4.1:14312108-14312127 | None:intergenic | 15.0% |
| !! | GTTGTAAAAATAGTATAATA+TGG | - | chr4.1:14311218-14311237 | MS.gene09288:intron | 15.0% |
| !! | TATTAAAAATGAAACATAGT+TGG | + | chr4.1:14307623-14307642 | None:intergenic | 15.0% |
| !! | TGTTATATGTTAAATTGAAT+TGG | + | chr4.1:14312109-14312128 | None:intergenic | 15.0% |
| !! | TTATATGTTAAATTGAATTG+GGG | + | chr4.1:14312107-14312126 | None:intergenic | 15.0% |
| !!! | AGAGATAATATTTTTTATGT+TGG | + | chr4.1:14308934-14308953 | None:intergenic | 15.0% |
| !!! | ATAAAACTTGTTAATACATA+AGG | + | chr4.1:14308204-14308223 | None:intergenic | 15.0% |
| !!! | ATAGTCTTTTTTATGTAAAT+TGG | - | chr4.1:14309114-14309133 | MS.gene09288:intron | 15.0% |
| !!! | CTATTTAGTTTTTAATTGTT+TGG | - | chr4.1:14311188-14311207 | MS.gene09288:intron | 15.0% |
| !!! | TTTTTTTATTAGAAGAATTG+GGG | - | chr4.1:14310997-14311016 | MS.gene09288:intron | 15.0% |
| !! | AATAGAGAAAATATACTTTC+TGG | + | chr4.1:14309070-14309089 | None:intergenic | 20.0% |
| !! | AGAATAGATGAAATACAAAA+AGG | + | chr4.1:14310694-14310713 | None:intergenic | 20.0% |
| !! | ATATATACTATCAGTTGAAA+AGG | - | chr4.1:14307570-14307589 | MS.gene09288:CDS | 20.0% |
| !! | ATGGCAAATATTAATATTGT+CGG | + | chr4.1:14309822-14309841 | None:intergenic | 20.0% |
| !! | CATTTAGATTATATTGATGT+CGG | - | chr4.1:14310770-14310789 | MS.gene09288:intron | 20.0% |
| !! | CTTATAAGATTAATAATGAG+TGG | - | chr4.1:14309336-14309355 | MS.gene09288:intron | 20.0% |
| !! | GAATAGATGAAATACAAAAA+GGG | + | chr4.1:14310693-14310712 | None:intergenic | 20.0% |
| !! | TAAAAAAGACTATGTTATAG+AGG | + | chr4.1:14309107-14309126 | None:intergenic | 20.0% |
| !!! | AGTTATATGATAATGAATGT+CGG | - | chr4.1:14311716-14311735 | MS.gene09288:intron | 20.0% |
| !!! | ATGTATTAACAAGTTTTATG+TGG | - | chr4.1:14308205-14308224 | MS.gene09288:intron | 20.0% |
| !!! | ATTGTTCCTTATTTGATTTT+GGG | + | chr4.1:14308768-14308787 | None:intergenic | 20.0% |
| !!! | CTTTTTTATGTAAATTGGAT+TGG | - | chr4.1:14309119-14309138 | MS.gene09288:intron | 20.0% |
| !!! | GAAAAAAACTCTTTTTTGAT+GGG | - | chr4.1:14309373-14309392 | MS.gene09288:CDS | 20.0% |
| !!! | GCATTTAATTTTAGATCATT+TGG | - | chr4.1:14311026-14311045 | MS.gene09288:intron | 20.0% |
| !!! | TATTGTTCCTTATTTGATTT+TGG | + | chr4.1:14308769-14308788 | None:intergenic | 20.0% |
| !!! | TGAAAAAAACTCTTTTTTGA+TGG | - | chr4.1:14309372-14309391 | MS.gene09288:CDS | 20.0% |
| !!! | TGTATTAACAAGTTTTATGT+GGG | - | chr4.1:14308206-14308225 | MS.gene09288:intron | 20.0% |
| !!! | TTTATTTGGAATTCAGAAAA+TGG | + | chr4.1:14310087-14310106 | None:intergenic | 20.0% |
| ! | AAAAATAAGCCAATCTTTAC+CGG | - | chr4.1:14308178-14308197 | MS.gene09288:intron | 25.0% |
| ! | AAAAATATGCCAATTCAAAC+AGG | + | chr4.1:14308001-14308020 | None:intergenic | 25.0% |
| ! | AAAAATTCCACTAAATAACC+TGG | + | chr4.1:14310490-14310509 | None:intergenic | 25.0% |
| ! | ACATAAGTAATTGTATTGTC+AGG | + | chr4.1:14312168-14312187 | None:intergenic | 25.0% |
| ! | AGTCACATAAAACAAGATAT+AGG | - | chr4.1:14311803-14311822 | MS.gene09288:intron | 25.0% |
| ! | ATGTCTATCATACATACTTT+GGG | - | chr4.1:14310649-14310668 | MS.gene09288:intron | 25.0% |
| ! | ATTCATTATCATATAACTGC+AGG | + | chr4.1:14311714-14311733 | None:intergenic | 25.0% |
| ! | ATTTCAAGAGATAGACAAAA+AGG | - | chr4.1:14310833-14310852 | MS.gene09288:intron | 25.0% |
| ! | CATTGCATATTAAAATGACT+AGG | + | chr4.1:14309032-14309051 | None:intergenic | 25.0% |
| ! | GAAAACAAGAAATCTTCAAA+AGG | + | chr4.1:14308692-14308711 | None:intergenic | 25.0% |
| ! | GAAGCTTATAAAGTTTATCT+TGG | - | chr4.1:14310460-14310479 | MS.gene09288:intron | 25.0% |
| ! | GAGAAACAAAGAAAAACAAT+AGG | - | chr4.1:14311957-14311976 | MS.gene09288:CDS | 25.0% |
| ! | TAATCACTCAAAGATCAAAA+TGG | + | chr4.1:14308396-14308415 | None:intergenic | 25.0% |
| ! | TCATCTTATTGATGTTGATA+AGG | - | chr4.1:14307916-14307935 | MS.gene09288:intron | 25.0% |
| ! | TCTCAAAAGGTTAAACTATT+AGG | - | chr4.1:14311085-14311104 | MS.gene09288:intron | 25.0% |
| ! | TTATCTATGTTGAAACTGTT+AGG | - | chr4.1:14310581-14310600 | MS.gene09288:intron | 25.0% |
| ! | TTGTCTATCTCTTGAAATTA+TGG | + | chr4.1:14310831-14310850 | None:intergenic | 25.0% |
| ! | TTTCTGTGTAAATTATAACG+TGG | + | chr4.1:14311304-14311323 | None:intergenic | 25.0% |
| !! | ACTCATTGCATTCTTTTATT+TGG | + | chr4.1:14310101-14310120 | None:intergenic | 25.0% |
| !! | GTTATATGATAATGAATGTC+GGG | - | chr4.1:14311717-14311736 | MS.gene09288:intron | 25.0% |
| !! | TCAAATATCTTTTAATGGTC+AGG | + | chr4.1:14311983-14312002 | None:intergenic | 25.0% |
| !! | TTTTATTCATAAGCTTCTCA+AGG | - | chr4.1:14308064-14308083 | MS.gene09288:intron | 25.0% |
| !!! | GAGAAAATCTTTTCAAGTTT+AGG | - | chr4.1:14310304-14310323 | MS.gene09288:intron | 25.0% |
| !!! | TTGTTCCTTATTTGATTTTG+GGG | + | chr4.1:14308767-14308786 | None:intergenic | 25.0% |
| AAACTATCTTTCTTCTGCAA+AGG | + | chr4.1:14307674-14307693 | None:intergenic | 30.0% | |
| AAAGAGGAAATCATTGCTAA+TGG | - | chr4.1:14309479-14309498 | MS.gene09288:intron | 30.0% | |
| AACCACCTATAAACTCATAA+GGG | + | chr4.1:14311455-14311474 | None:intergenic | 30.0% | |
| AAGAGGAAATCATTGCTAAT+GGG | - | chr4.1:14309480-14309499 | MS.gene09288:intron | 30.0% | |
| AGTAATTGTATTGTCAGGAA+AGG | + | chr4.1:14312163-14312182 | None:intergenic | 30.0% | |
| ATGGAGCTTAAGAAAAATAC+CGG | + | chr4.1:14308377-14308396 | None:intergenic | 30.0% | |
| CATTATAAGCTGCAAAAACA+TGG | - | chr4.1:14308544-14308563 | MS.gene09288:intron | 30.0% | |
| GATGTCTATCATACATACTT+TGG | - | chr4.1:14310648-14310667 | MS.gene09288:intron | 30.0% | |
| TATAGTCCAAAAATGCAGTA+AGG | + | chr4.1:14308422-14308441 | None:intergenic | 30.0% | |
| TGGAATAGTTCAAACGTTAA+AGG | - | chr4.1:14311930-14311949 | MS.gene09288:CDS | 30.0% | |
| TGTCTATCATACATACTTTG+GGG | - | chr4.1:14310650-14310669 | MS.gene09288:intron | 30.0% | |
| TTTAGATCATTTGGTCATAG+AGG | - | chr4.1:14311035-14311054 | MS.gene09288:intron | 30.0% | |
| ! | GAAAAGATTTTCTCACATCA+GGG | + | chr4.1:14310298-14310317 | None:intergenic | 30.0% |
| ! | TGAAAAGATTTTCTCACATC+AGG | + | chr4.1:14310299-14310318 | None:intergenic | 30.0% |
| !! | AACTTGTTAATACATAAGGC+CGG | + | chr4.1:14308200-14308219 | None:intergenic | 30.0% |
| !! | ATTTTTCAACAAGCACTAAC+GGG | + | chr4.1:14311573-14311592 | None:intergenic | 30.0% |
| !! | GATTTTTCAACAAGCACTAA+CGG | + | chr4.1:14311574-14311593 | None:intergenic | 30.0% |
| !! | TTAACAAGTTTTATGTGGGT+CGG | - | chr4.1:14308210-14308229 | MS.gene09288:intron | 30.0% |
| !!! | ATGGTCTTATTGTTTTTCTC+AGG | - | chr4.1:14310340-14310359 | MS.gene09288:intron | 30.0% |
| !!! | CATGTTTTTTTCGTCTTTTG+TGG | - | chr4.1:14310522-14310541 | MS.gene09288:intron | 30.0% |
| !!! | GAAAGATAGTTTTGAATCTG+TGG | - | chr4.1:14307682-14307701 | MS.gene09288:intron | 30.0% |
| !!! | GTTGTTTTATTTGTTGTTGC+AGG | - | chr4.1:14312206-14312225 | MS.gene09288:intron | 30.0% |
| !!! | GTTTAACCTTTTGAGATACT+TGG | + | chr4.1:14311081-14311100 | None:intergenic | 30.0% |
| !!! | TAGTTTTGAATCTGTGGTAA+TGG | - | chr4.1:14307688-14307707 | MS.gene09288:intron | 30.0% |
| AACAACCTCATCAACATCTA+CGG | + | chr4.1:14307780-14307799 | None:intergenic | 35.0% | |
| AACCTAAGATAACAAGTCGA+TGG | + | chr4.1:14308449-14308468 | None:intergenic | 35.0% | |
| AACTGTTAGGACACAGAAAA+TGG | - | chr4.1:14310594-14310613 | MS.gene09288:intron | 35.0% | |
| ACAGTCCCTTATGAGTTTAT+AGG | - | chr4.1:14311447-14311466 | MS.gene09288:intron | 35.0% | |
| ACTATGAGAAATTGGTAGGT+GGG | - | chr4.1:14309643-14309662 | MS.gene09288:CDS | 35.0% | |
| AGAAAGTAATCACACTGTTG+CGG | - | chr4.1:14311754-14311773 | MS.gene09288:intron | 35.0% | |
| AGAAATGTTAGCGAGAAAGT+TGG | - | chr4.1:14311835-14311854 | MS.gene09288:intron | 35.0% | |
| AGAACATACAATAGCAGTAG+AGG | - | chr4.1:14308844-14308863 | MS.gene09288:intron | 35.0% | |
| AGACAACCATTTGGATTGAA+GGG | - | chr4.1:14309407-14309426 | MS.gene09288:CDS | 35.0% | |
| AGGAACCCCAAAATCAAATA+AGG | - | chr4.1:14308759-14308778 | MS.gene09288:intron | 35.0% | |
| ATAAGCTGCAAAAACATGGA+TGG | - | chr4.1:14308548-14308567 | MS.gene09288:intron | 35.0% | |
| ATACTTTCTCTGAGTTGTGT+CGG | + | chr4.1:14308898-14308917 | None:intergenic | 35.0% | |
| ATGCCATAATTCTAAGCTTG+TGG | - | chr4.1:14310923-14310942 | MS.gene09288:intron | 35.0% | |
| CACAGCAGAAAACTGAAAAT+AGG | + | chr4.1:14310160-14310179 | None:intergenic | 35.0% | |
| CTGAGTGTATACAAAATGTG+TGG | + | chr4.1:14307863-14307882 | None:intergenic | 35.0% | |
| CTTTCACTTCTTGAATATCC+TGG | - | chr4.1:14312230-14312249 | MS.gene09288:intron | 35.0% | |
| GAACCACCTATAAACTCATA+AGG | + | chr4.1:14311456-14311475 | None:intergenic | 35.0% | |
| GAAGACTATGAGAAATTGGT+AGG | - | chr4.1:14309639-14309658 | MS.gene09288:CDS | 35.0% | |
| GATGCAATTGCAAGCTTATA+TGG | + | chr4.1:14309232-14309251 | None:intergenic | 35.0% | |
| GGATAGAATAAATGTGGAGA+AGG | - | chr4.1:14308511-14308530 | MS.gene09288:intron | 35.0% | |
| GTTGAAAAATCTACCTGAAC+TGG | - | chr4.1:14311583-14311602 | MS.gene09288:intron | 35.0% | |
| TAAATAGAACGACATGCATC+TGG | + | chr4.1:14311175-14311194 | None:intergenic | 35.0% | |
| TAAATGCATGAGAAAGAGAG+AGG | + | chr4.1:14310756-14310775 | None:intergenic | 35.0% | |
| TAGCCTGATCATGATTGATA+GGG | - | chr4.1:14310418-14310437 | MS.gene09288:intron | 35.0% | |
| TATGAGTTTATAGGTGGTTC+TGG | - | chr4.1:14311456-14311475 | MS.gene09288:intron | 35.0% | |
| TCGCTTGGATAGAATAAATG+TGG | - | chr4.1:14308505-14308524 | MS.gene09288:intron | 35.0% | |
| TCTAGCGTAAGGTTGAAAAT+TGG | - | chr4.1:14311270-14311289 | MS.gene09288:CDS | 35.0% | |
| TCTCTTGAAATTATGGCCAA+AGG | + | chr4.1:14310824-14310843 | None:intergenic | 35.0% | |
| TCTGTTGAAACTTGAAAGGT+GGG | + | chr4.1:14309304-14309323 | None:intergenic | 35.0% | |
| TGCCATAATTCTAAGCTTGT+GGG | - | chr4.1:14310924-14310943 | MS.gene09288:intron | 35.0% | |
| TGGACTAAACTACTACTTTG+AGG | + | chr4.1:14309212-14309231 | None:intergenic | 35.0% | |
| TGGAGCTTAAGAAAAATACC+GGG | + | chr4.1:14308376-14308395 | None:intergenic | 35.0% | |
| TGTCTCTGTTGAAACTTGAA+AGG | + | chr4.1:14309308-14309327 | None:intergenic | 35.0% | |
| TTAGCCTGCAAAATGAAGAT+GGG | - | chr4.1:14308316-14308335 | MS.gene09288:intron | 35.0% | |
| TTCTCAATAGAGAGCTGTAT+TGG | - | chr4.1:14311409-14311428 | MS.gene09288:intron | 35.0% | |
| ! | AATGAAGATGGGTCTTTTTC+AGG | - | chr4.1:14308327-14308346 | MS.gene09288:intron | 35.0% |
| ! | ATGTTGATGAGGTTGTTTCA+TGG | - | chr4.1:14307783-14307802 | MS.gene09288:intron | 35.0% |
| ! | ATTTTCAGTTTTCTGCTGTG+TGG | - | chr4.1:14310160-14310179 | MS.gene09288:intron | 35.0% |
| ! | TTACCACCTTACTGCATTTT+TGG | - | chr4.1:14308413-14308432 | MS.gene09288:intron | 35.0% |
| ! | TTCAAGTTTAGGTTCATTGC+TGG | - | chr4.1:14310315-14310334 | MS.gene09288:intron | 35.0% |
| ! | TTTTCAGTTTTCTGCTGTGT+GGG | - | chr4.1:14310161-14310180 | MS.gene09288:intron | 35.0% |
| !! | AAAAACATGGATGGTGGATT+TGG | - | chr4.1:14308557-14308576 | MS.gene09288:intron | 35.0% |
| !! | ACTGATAAGAAGTGTTGATC+GGG | - | chr4.1:14311906-14311925 | MS.gene09288:intron | 35.0% |
| !! | ATCCATCGACTTGTTATCTT+AGG | - | chr4.1:14308444-14308463 | MS.gene09288:intron | 35.0% |
| !! | ATGAAGATGGGTCTTTTTCA+GGG | - | chr4.1:14308328-14308347 | MS.gene09288:intron | 35.0% |
| !! | CACTGATAAGAAGTGTTGAT+CGG | - | chr4.1:14311905-14311924 | MS.gene09288:intron | 35.0% |
| !! | GTTCTGAAGGCAACAATTAA+TGG | - | chr4.1:14309695-14309714 | MS.gene09288:intron | 35.0% |
| !! | TTACACAGAAAGTGCTACAT+GGG | - | chr4.1:14311313-14311332 | MS.gene09288:CDS | 35.0% |
| !! | TTTACACAGAAAGTGCTACA+TGG | - | chr4.1:14311312-14311331 | MS.gene09288:CDS | 35.0% |
| !! | TTTTCAAGAAGATGAGGTGA+GGG | - | chr4.1:14309617-14309636 | MS.gene09288:CDS | 35.0% |
| !!! | GTCTTTTTCAGGGGATATAT+GGG | - | chr4.1:14308338-14308357 | MS.gene09288:intron | 35.0% |
| !!! | GTGTCTTTTTCAAGAAGATG+AGG | - | chr4.1:14309611-14309630 | MS.gene09288:CDS | 35.0% |
| !!! | TCTTTTTCAGGGGATATATG+GGG | - | chr4.1:14308339-14308358 | MS.gene09288:intron | 35.0% |
| !!! | TTTTGGGGTTCCTATCAAAT+TGG | + | chr4.1:14308752-14308771 | None:intergenic | 35.0% |
| !!! | TTTTTCAAGAAGATGAGGTG+AGG | - | chr4.1:14309616-14309635 | MS.gene09288:CDS | 35.0% |
| AAAAATCTACCTGAACTGGC+TGG | - | chr4.1:14311587-14311606 | MS.gene09288:intron | 40.0% | |
| AAAGTTTATCTTGGACTGCC+AGG | - | chr4.1:14310469-14310488 | MS.gene09288:intron | 40.0% | |
| AACTGCAGGATTTGTAGTTG+TGG | + | chr4.1:14311700-14311719 | None:intergenic | 40.0% | |
| AATCCGATTGACAACGTCTA+CGG | + | chr4.1:14312288-14312307 | None:intergenic | 40.0% | |
| ACCTGGCAAGATCTAAAAAC+TGG | + | chr4.1:14310374-14310393 | None:intergenic | 40.0% | |
| AGGAAAAGCAATGCTTCACA+AGG | + | chr4.1:14310140-14310159 | None:intergenic | 40.0% | |
| AGTCCAAAAATGCAGTAAGG+TGG | + | chr4.1:14308419-14308438 | None:intergenic | 40.0% | |
| ATCAACCATAGGTTCAAGCA+TGG | - | chr4.1:14311612-14311631 | MS.gene09288:intron | 40.0% | |
| ATGGAACATCTCAGGATGAA+TGG | - | chr4.1:14307707-14307726 | MS.gene09288:intron | 40.0% | |
| ATGTTGTAACCCATTTGGGT+TGG | - | chr4.1:14309840-14309859 | MS.gene09288:intron | 40.0% | |
| ATTGTCAGGAAAGGATAGAC+AGG | + | chr4.1:14312154-14312173 | None:intergenic | 40.0% | |
| CACAAACCAAAACATGAAGC+AGG | + | chr4.1:14310891-14310910 | None:intergenic | 40.0% | |
| CCAAGCGACGTAATATTGAT+AGG | + | chr4.1:14308493-14308512 | None:intergenic | 40.0% | |
| CCTATCAATATTACGTCGCT+TGG | - | chr4.1:14308490-14308509 | MS.gene09288:intron | 40.0% | |
| CGGAAATGACAATGCTATGA+TGG | - | chr4.1:14311774-14311793 | MS.gene09288:intron | 40.0% | |
| CGTGAACCAAGTATCTCAAA+AGG | - | chr4.1:14311072-14311091 | MS.gene09288:intron | 40.0% | |
| CTAAACTAGACCACCCAAAT+TGG | + | chr4.1:14309936-14309955 | None:intergenic | 40.0% | |
| CTAAAGTGTGGACAATGCAT+AGG | - | chr4.1:14310948-14310967 | MS.gene09288:intron | 40.0% | |
| CTAGCCTGATCATGATTGAT+AGG | - | chr4.1:14310417-14310436 | MS.gene09288:intron | 40.0% | |
| CTATGCATTGTCCACACTTT+AGG | + | chr4.1:14310950-14310969 | None:intergenic | 40.0% | |
| CTCCATGGCATTTGTATGAT+TGG | + | chr4.1:14311340-14311359 | None:intergenic | 40.0% | |
| CTCTGTTGAAACTTGAAAGG+TGG | + | chr4.1:14309305-14309324 | None:intergenic | 40.0% | |
| CTTGTTGACAAGGACTTACT+TGG | - | chr4.1:14310212-14310231 | MS.gene09288:intron | 40.0% | |
| CTTTCTGGACATATTGTTGC+TGG | + | chr4.1:14309055-14309074 | None:intergenic | 40.0% | |
| GAACACATTGAATGAAGCAG+TGG | - | chr4.1:14309763-14309782 | MS.gene09288:intron | 40.0% | |
| GAACCCTATCAATCATGATC+AGG | + | chr4.1:14310424-14310443 | None:intergenic | 40.0% | |
| GAATCAAACATGAGACCTTG+AGG | + | chr4.1:14309904-14309923 | None:intergenic | 40.0% | |
| GACACTGAAATTCTAGCGTA+AGG | - | chr4.1:14311259-14311278 | MS.gene09288:CDS | 40.0% | |
| GACTATGAGAAATTGGTAGG+TGG | - | chr4.1:14309642-14309661 | MS.gene09288:CDS | 40.0% | |
| GAGACAACCATTTGGATTGA+AGG | - | chr4.1:14309406-14309425 | MS.gene09288:CDS | 40.0% | |
| GAGGGAAGACTATGAGAAAT+TGG | - | chr4.1:14309635-14309654 | MS.gene09288:CDS | 40.0% | |
| GCAGTCAATACAACACAACA+TGG | + | chr4.1:14309980-14309999 | None:intergenic | 40.0% | |
| GCATTCTTCATGAAACCTAG+TGG | - | chr4.1:14310855-14310874 | MS.gene09288:intron | 40.0% | |
| GTCACTAGATCTTGTTGACA+AGG | - | chr4.1:14310202-14310221 | MS.gene09288:intron | 40.0% | |
| GTCCCTTATGAGTTTATAGG+TGG | - | chr4.1:14311450-14311469 | MS.gene09288:intron | 40.0% | |
| GTCTCATGTTTGATTCTCTC+CGG | - | chr4.1:14309908-14309927 | MS.gene09288:intron | 40.0% | |
| GTTAAATCTGGAGGTCTGAA+TGG | - | chr4.1:14310257-14310276 | MS.gene09288:intron | 40.0% | |
| TACATAAGGCCGGTAAAGAT+TGG | + | chr4.1:14308190-14308209 | None:intergenic | 40.0% | |
| TAGCCAAGTGATGACTAACA+AGG | - | chr4.1:14309550-14309569 | MS.gene09288:intron | 40.0% | |
| TCATGATTGATAGGGTTCAC+TGG | - | chr4.1:14310426-14310445 | MS.gene09288:intron | 40.0% | |
| TCATTTGGTCATAGAGGCTT+TGG | - | chr4.1:14311041-14311060 | MS.gene09288:intron | 40.0% | |
| TGAGCTATAGATCCAAGTGT+TGG | - | chr4.1:14309719-14309738 | MS.gene09288:intron | 40.0% | |
| TGAGTTCCCTTCAATCCAAA+TGG | + | chr4.1:14309416-14309435 | None:intergenic | 40.0% | |
| TGCCATGTTGTAACCCATTT+GGG | - | chr4.1:14309836-14309855 | MS.gene09288:intron | 40.0% | |
| TGTGAGCGACAAGTTAAATC+TGG | - | chr4.1:14310245-14310264 | MS.gene09288:intron | 40.0% | |
| TGTTACGAGCCTGTTTGAAT+TGG | - | chr4.1:14307989-14308008 | MS.gene09288:intron | 40.0% | |
| TGTTAGGACACAGAAAATGG+TGG | - | chr4.1:14310597-14310616 | MS.gene09288:intron | 40.0% | |
| TTAACTGCCCTTGATCTTCT+CGG | - | chr4.1:14307743-14307762 | MS.gene09288:intron | 40.0% | |
| TTGACAAGGACTTACTTGGT+TGG | - | chr4.1:14310216-14310235 | MS.gene09288:intron | 40.0% | |
| TTGCCATGTTGTAACCCATT+TGG | - | chr4.1:14309835-14309854 | MS.gene09288:intron | 40.0% | |
| TTGTCAGGAAAGGATAGACA+GGG | + | chr4.1:14312153-14312172 | None:intergenic | 40.0% | |
| ! | AAGACCCATCTTCATTTTGC+AGG | + | chr4.1:14308323-14308342 | None:intergenic | 40.0% |
| ! | ATATTGTCGGCTAGTCATTC+CGG | + | chr4.1:14309809-14309828 | None:intergenic | 40.0% |
| ! | CAATTTGGGTGGTCTAGTTT+AGG | - | chr4.1:14309934-14309953 | MS.gene09288:intron | 40.0% |
| ! | CTATCATACATACTTTGGGG+TGG | - | chr4.1:14310653-14310672 | MS.gene09288:intron | 40.0% |
| ! | GAGATGATGGTTAAACCTAC+CGG | - | chr4.1:14309787-14309806 | MS.gene09288:intron | 40.0% |
| ! | GAGTTTTCCGAGAAGATCAA+GGG | + | chr4.1:14307753-14307772 | None:intergenic | 40.0% |
| ! | GCAGCTCTTGTTTGATAATC+AGG | + | chr4.1:14309162-14309181 | None:intergenic | 40.0% |
| ! | GTTAGCCTGCAAAATGAAGA+TGG | - | chr4.1:14308315-14308334 | MS.gene09288:intron | 40.0% |
| ! | TTATGTGGTTTGGGTTTGTG+TGG | - | chr4.1:14311866-14311885 | MS.gene09288:intron | 40.0% |
| ! | TTGTTGCCTGCTTCATGTTT+TGG | - | chr4.1:14310882-14310901 | MS.gene09288:intron | 40.0% |
| ! | TTTAGGTTCATTGCTGGAGA+TGG | - | chr4.1:14310321-14310340 | MS.gene09288:intron | 40.0% |
| ! | TTTCAGTTTTCTGCTGTGTG+GGG | - | chr4.1:14310162-14310181 | MS.gene09288:intron | 40.0% |
| !! | AACCCAAATGGGTTACAACA+TGG | + | chr4.1:14309841-14309860 | None:intergenic | 40.0% |
| !! | AACTGATTGGATGGTTCTGA+AGG | - | chr4.1:14309682-14309701 | MS.gene09288:intron | 40.0% |
| !! | ACCAGTTTTTAGATCTTGCC+AGG | - | chr4.1:14310370-14310389 | MS.gene09288:intron | 40.0% |
| !! | ATGAGAAAGAGAGAGGTGTT+GGG | + | chr4.1:14310749-14310768 | None:intergenic | 40.0% |
| !! | CTATAGATCCAAGTGTTGGA+AGG | - | chr4.1:14309723-14309742 | MS.gene09288:intron | 40.0% |
| !! | CTGATAAGAAGTGTTGATCG+GGG | - | chr4.1:14311907-14311926 | MS.gene09288:intron | 40.0% |
| !! | TAACGCTGCTGTTTCAACAA+AGG | + | chr4.1:14309522-14309541 | None:intergenic | 40.0% |
| !! | TACACAGAAAGTGCTACATG+GGG | - | chr4.1:14311314-14311333 | MS.gene09288:CDS | 40.0% |
| !! | TTGTATTGACTGCTCACTCA+AGG | - | chr4.1:14309987-14310006 | MS.gene09288:intron | 40.0% |
| !!! | CTCTTTTTTGATGGGCTCTT+AGG | - | chr4.1:14309381-14309400 | MS.gene09288:CDS | 40.0% |
| !!! | GGTCTTTTTCAGGGGATATA+TGG | - | chr4.1:14308337-14308356 | MS.gene09288:intron | 40.0% |
| !!! | TGAAGATGGGTCTTTTTCAG+GGG | - | chr4.1:14308329-14308348 | MS.gene09288:intron | 40.0% |
| AAAGCATAAGCCGGGTCTAT+CGG | + | chr4.1:14312263-14312282 | None:intergenic | 45.0% | |
| AACCATAGGTTCAAGCATGG+TGG | - | chr4.1:14311615-14311634 | MS.gene09288:intron | 45.0% | |
| AAGTTGGAGCTCGTCTTATG+TGG | - | chr4.1:14311851-14311870 | MS.gene09288:intron | 45.0% | |
| ACAAGGACTTACTTGGTTGG+TGG | - | chr4.1:14310219-14310238 | MS.gene09288:intron | 45.0% | |
| ACTGGCTGGATATCAACCAT+AGG | - | chr4.1:14311601-14311620 | MS.gene09288:intron | 45.0% | |
| AGCTGCAAAAACATGGATGG+TGG | - | chr4.1:14308551-14308570 | MS.gene09288:intron | 45.0% | |
| AGGATGAATGGAGCATACTG+GGG | - | chr4.1:14307719-14307738 | MS.gene09288:intron | 45.0% | |
| ATCAGTTGTCACCACGATGA+TGG | - | chr4.1:14307809-14307828 | MS.gene09288:intron | 45.0% | |
| ATCCGATTGACAACGTCTAC+GGG | + | chr4.1:14312287-14312306 | None:intergenic | 45.0% | |
| ATGAAGCAGTGGTGAGATGA+TGG | - | chr4.1:14309774-14309793 | MS.gene09288:intron | 45.0% | |
| CAGGATGAATGGAGCATACT+GGG | - | chr4.1:14307718-14307737 | MS.gene09288:intron | 45.0% | |
| CTTAGGTCGAGACAACCATT+TGG | - | chr4.1:14309398-14309417 | MS.gene09288:CDS | 45.0% | |
| GAGCGACAAGTTAAATCTGG+AGG | - | chr4.1:14310248-14310267 | MS.gene09288:intron | 45.0% | |
| GAGCTCGTCTTATGTGGTTT+GGG | - | chr4.1:14311857-14311876 | MS.gene09288:intron | 45.0% | |
| GCAGGCAACAAAAAACCACT+AGG | + | chr4.1:14310873-14310892 | None:intergenic | 45.0% | |
| GCTCCTTGTTAGTCATCACT+TGG | + | chr4.1:14309556-14309575 | None:intergenic | 45.0% | |
| GGCCAATCATACAAATGCCA+TGG | - | chr4.1:14311335-14311354 | MS.gene09288:CDS | 45.0% | |
| GGCCCACAAGCTTAGAATTA+TGG | + | chr4.1:14310929-14310948 | None:intergenic | 45.0% | |
| GGGCTTGGGACAAGTTAATA+GGG | + | chr4.1:14309284-14309303 | None:intergenic | 45.0% | |
| GTATCCTTTGACACGTGTGT+TGG | - | chr4.1:14307948-14307967 | MS.gene09288:intron | 45.0% | |
| TACCACCATGCTTGAACCTA+TGG | + | chr4.1:14311620-14311639 | None:intergenic | 45.0% | |
| TACCCGTAGACGTTGTCAAT+CGG | - | chr4.1:14312282-14312301 | MS.gene09288:CDS | 45.0% | |
| TAGACATCCACAGCATCATC+CGG | + | chr4.1:14310636-14310655 | None:intergenic | 45.0% | |
| TAGGGTTCACTGGATCAGTA+AGG | - | chr4.1:14310436-14310455 | MS.gene09288:intron | 45.0% | |
| TAGTGACCCCGTTATAGCAA+GGG | + | chr4.1:14310189-14310208 | None:intergenic | 45.0% | |
| TCAAACATGAGACCTTGAGG+AGG | + | chr4.1:14309901-14309920 | None:intergenic | 45.0% | |
| TCAGGATGAATGGAGCATAC+TGG | - | chr4.1:14307717-14307736 | MS.gene09288:intron | 45.0% | |
| TCAGTTGTCACCACGATGAT+GGG | - | chr4.1:14307810-14307829 | MS.gene09288:intron | 45.0% | |
| TCTACGGGTAAAGCATAAGC+CGG | + | chr4.1:14312272-14312291 | None:intergenic | 45.0% | |
| TGAACCAACACACGTGTCAA+AGG | + | chr4.1:14307955-14307974 | None:intergenic | 45.0% | |
| TGGACTGCCAGGTTATTTAG+TGG | - | chr4.1:14310480-14310499 | MS.gene09288:intron | 45.0% | |
| TGGGCTTGGGACAAGTTAAT+AGG | + | chr4.1:14309285-14309304 | None:intergenic | 45.0% | |
| TGGTGGAATTTCAGACAGAC+CGG | - | chr4.1:14310614-14310633 | MS.gene09288:intron | 45.0% | |
| TTATGGCCAAAGGAAGTCAC+TGG | + | chr4.1:14310814-14310833 | None:intergenic | 45.0% | |
| ! | ATTCTCTCCGGTGCCAATTT+GGG | - | chr4.1:14309920-14309939 | MS.gene09288:intron | 45.0% |
| ! | CATGAGAAAGAGAGAGGTGT+TGG | + | chr4.1:14310750-14310769 | None:intergenic | 45.0% |
| ! | CGAGTTTTCCGAGAAGATCA+AGG | + | chr4.1:14307754-14307773 | None:intergenic | 45.0% |
| ! | GAAACTTGAAAGGTGGGCTT+GGG | + | chr4.1:14309298-14309317 | None:intergenic | 45.0% |
| ! | TGAAACTTGAAAGGTGGGCT+TGG | + | chr4.1:14309299-14309318 | None:intergenic | 45.0% |
| ! | TTCAGTTTTCTGCTGTGTGG+GGG | - | chr4.1:14310163-14310182 | MS.gene09288:intron | 45.0% |
| !! | ATAAGAAGTGTTGATCGGGG+TGG | - | chr4.1:14311910-14311929 | MS.gene09288:intron | 45.0% |
| !! | CCTATATGAAGTGCTGTGTG+CGG | - | chr4.1:14308718-14308737 | MS.gene09288:intron | 45.0% |
| !! | CGTGTGTTGGTTCACTTTGA+AGG | - | chr4.1:14307961-14307980 | MS.gene09288:intron | 45.0% |
| !! | CTATATGAAGTGCTGTGTGC+GGG | - | chr4.1:14308719-14308738 | MS.gene09288:intron | 45.0% |
| !! | CTGCTGTTTCAACAAAGGCA+GGG | + | chr4.1:14309517-14309536 | None:intergenic | 45.0% |
| !! | CTGTGGTAATGGAACATCTC+AGG | - | chr4.1:14307699-14307718 | MS.gene09288:intron | 45.0% |
| !! | TATGGGGTGAAGTTGATACC+CGG | - | chr4.1:14308355-14308374 | MS.gene09288:intron | 45.0% |
| !! | TGAGAAAGAGAGAGGTGTTG+GGG | + | chr4.1:14310748-14310767 | None:intergenic | 45.0% |
| !!! | TTATTTTTTTTTAAATATTC+TGG | - | chr4.1:14308259-14308278 | MS.gene09288:intron | 5.0% |
| AAGCTTGTGGGCCTAAAGTG+TGG | - | chr4.1:14310936-14310955 | MS.gene09288:intron | 50.0% | |
| ATTTGGTTGCACACCTGGTG+GGG | - | chr4.1:14308574-14308593 | MS.gene09288:intron | 50.0% | |
| CACTGACCAGTGACTTCCTT+TGG | - | chr4.1:14310805-14310824 | MS.gene09288:intron | 50.0% | |
| CAGACGGCACATGAACTGAT+TGG | - | chr4.1:14309669-14309688 | MS.gene09288:CDS | 50.0% | |
| CAGTTGTCACCACGATGATG+GGG | - | chr4.1:14307811-14307830 | MS.gene09288:intron | 50.0% | |
| CCAGGTATGCTACTCATGGT+GGG | - | chr4.1:14310388-14310407 | MS.gene09288:intron | 50.0% | |
| CCGCACACAGCACTTCATAT+AGG | + | chr4.1:14308721-14308740 | None:intergenic | 50.0% | |
| CGACACCGTAGATGTTGATG+AGG | - | chr4.1:14307772-14307791 | MS.gene09288:intron | 50.0% | |
| CGGCACATGAACTGATTGGA+TGG | - | chr4.1:14309673-14309692 | MS.gene09288:CDS | 50.0% | |
| CTACGGGTAAAGCATAAGCC+GGG | + | chr4.1:14312271-14312290 | None:intergenic | 50.0% | |
| CTAGTGACCCCGTTATAGCA+AGG | + | chr4.1:14310190-14310209 | None:intergenic | 50.0% | |
| CTCACATCAGGGAGTTTCTC+TGG | + | chr4.1:14310287-14310306 | None:intergenic | 50.0% | |
| CTTGCCAGGTATGCTACTCA+TGG | - | chr4.1:14310384-14310403 | MS.gene09288:intron | 50.0% | |
| GACTAGGCAGAAGACGTCTT+GGG | + | chr4.1:14309016-14309035 | None:intergenic | 50.0% | |
| GAGCGCATGGTGACTAAGTT+TGG | - | chr4.1:14311363-14311382 | MS.gene09288:CDS | 50.0% | |
| GGAGCTCGTCTTATGTGGTT+TGG | - | chr4.1:14311856-14311875 | MS.gene09288:intron | 50.0% | |
| GGGTTAGGGGCCAATTTGAT+AGG | - | chr4.1:14308739-14308758 | MS.gene09288:intron | 50.0% | |
| TAGACCACCCAAATTGGCAC+CGG | + | chr4.1:14309930-14309949 | None:intergenic | 50.0% | |
| TGACTAGGCAGAAGACGTCT+TGG | + | chr4.1:14309017-14309036 | None:intergenic | 50.0% | |
| TGGAGTGAAACCGATAGACC+CGG | - | chr4.1:14312250-14312269 | MS.gene09288:intron | 50.0% | |
| ! | AGTTGTCACCACGATGATGG+GGG | - | chr4.1:14307812-14307831 | MS.gene09288:intron | 50.0% |
| ! | GATTCTCTCCGGTGCCAATT+TGG | - | chr4.1:14309919-14309938 | MS.gene09288:intron | 50.0% |
| ! | GATTTGGTTGCACACCTGGT+GGG | - | chr4.1:14308573-14308592 | MS.gene09288:intron | 50.0% |
| ! | GGTTGATATCCAGCCAGTTC+AGG | + | chr4.1:14311599-14311618 | None:intergenic | 50.0% |
| ! | TTGTGTCGGAGCTTAGCTCT+GGG | + | chr4.1:14308884-14308903 | None:intergenic | 50.0% |
| !! | CATACATACTTTGGGGTGGC+TGG | - | chr4.1:14310657-14310676 | MS.gene09288:intron | 50.0% |
| !! | CCAAGTGTTGGAAGGTCACA+CGG | - | chr4.1:14309731-14309750 | MS.gene09288:intron | 50.0% |
| !! | CTCTCTCACTTTTACGCTGC+TGG | - | chr4.1:14312061-14312080 | MS.gene09288:CDS | 50.0% |
| !! | GCTGCTGTTTCAACAAAGGC+AGG | + | chr4.1:14309518-14309537 | None:intergenic | 50.0% |
| !! | GGGGGATTTGCTGGAAATGT+TGG | - | chr4.1:14307830-14307849 | MS.gene09288:intron | 50.0% |
| ACCACCAGGCCAACCCAAAT+GGG | + | chr4.1:14309852-14309871 | None:intergenic | 55.0% | |
| AGACAGACCGGATGATGCTG+TGG | - | chr4.1:14310626-14310645 | MS.gene09288:intron | 55.0% | |
| CACCATGCGCTCTATCTCCA+TGG | + | chr4.1:14311355-14311374 | None:intergenic | 55.0% | |
| CAGCAAATCCCCCATCATCG+TGG | + | chr4.1:14307823-14307842 | None:intergenic | 55.0% | |
| CCCACCATGAGTAGCATACC+TGG | + | chr4.1:14310391-14310410 | None:intergenic | 55.0% | |
| CCGTGTGACCTTCCAACACT+TGG | + | chr4.1:14309734-14309753 | None:intergenic | 55.0% | |
| GCCAGGTATGCTACTCATGG+TGG | - | chr4.1:14310387-14310406 | MS.gene09288:intron | 55.0% | |
| GTTGTGTCGGAGCTTAGCTC+TGG | + | chr4.1:14308885-14308904 | None:intergenic | 55.0% | |
| TGCCATGGAGATAGAGCGCA+TGG | - | chr4.1:14311350-14311369 | MS.gene09288:CDS | 55.0% | |
| TTGGAGTGTGCTCCTCCTCA+AGG | - | chr4.1:14309886-14309905 | MS.gene09288:intron | 55.0% | |
| ! | GGATTTGGTTGCACACCTGG+TGG | - | chr4.1:14308572-14308591 | MS.gene09288:intron | 55.0% |
| ! | GGTGGATTTGGTTGCACACC+TGG | - | chr4.1:14308569-14308588 | MS.gene09288:intron | 55.0% |
| ! | TGTCGGCTAGTCATTCCGGT+AGG | + | chr4.1:14309805-14309824 | None:intergenic | 55.0% |
| ! | TGTGGGGGCCCTTGCTATAA+CGG | - | chr4.1:14310178-14310197 | MS.gene09288:intron | 55.0% |
| !! | AAGTGCTGTGTGCGGGTTAG+GGG | - | chr4.1:14308726-14308745 | MS.gene09288:intron | 55.0% |
| !! | ATTGGTAGGTGGGCTGCAGA+CGG | - | chr4.1:14309653-14309672 | MS.gene09288:CDS | 55.0% |
| !! | CACGATGATGGGGGATTTGC+TGG | - | chr4.1:14307821-14307840 | MS.gene09288:intron | 55.0% |
| !! | GAAGTGCTGTGTGCGGGTTA+GGG | - | chr4.1:14308725-14308744 | MS.gene09288:intron | 55.0% |
| !! | GGGTCTATCGGTTTCACTCC+AGG | + | chr4.1:14312251-14312270 | None:intergenic | 55.0% |
| !! | GTAACCCATTTGGGTTGGCC+TGG | - | chr4.1:14309845-14309864 | MS.gene09288:intron | 55.0% |
| !! | GTGGTGTTGGCTTGAGGTCT+TGG | - | chr4.1:14309867-14309886 | MS.gene09288:intron | 55.0% |
| !! | TGAAGTGCTGTGTGCGGGTT+AGG | - | chr4.1:14308724-14308743 | MS.gene09288:intron | 55.0% |
| CACCACCAGGCCAACCCAAA+TGG | + | chr4.1:14309853-14309872 | None:intergenic | 60.0% | |
| CCAGCATGAGATTCCCCACC+AGG | + | chr4.1:14308590-14308609 | None:intergenic | 60.0% | |
| CCTGGTGGGGAATCTCATGC+TGG | - | chr4.1:14308587-14308606 | MS.gene09288:intron | 60.0% | |
| GACCTCAAGCCAACACCACC+AGG | + | chr4.1:14309866-14309885 | None:intergenic | 60.0% | |
| ! | CTCTCCGGTGCCAATTTGGG+TGG | - | chr4.1:14309923-14309942 | MS.gene09288:intron | 60.0% |
| ! | GTGGGGGCCCTTGCTATAAC+GGG | - | chr4.1:14310179-14310198 | MS.gene09288:intron | 60.0% |
| ! | TGGGGGCCCTTGCTATAACG+GGG | - | chr4.1:14310180-14310199 | MS.gene09288:intron | 60.0% |
| !! | ACCCATTTGGGTTGGCCTGG+TGG | - | chr4.1:14309848-14309867 | MS.gene09288:intron | 60.0% |
| !! | TTGGGTTGGCCTGGTGGTGT+TGG | - | chr4.1:14309854-14309873 | MS.gene09288:intron | 60.0% |
| !! | GGCCTGGTGGTGTTGGCTTG+AGG | - | chr4.1:14309861-14309880 | MS.gene09288:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 14307538 | 14312322 | 14307538 | ID=MS.gene09288 |
| chr4.1 | mRNA | 14307538 | 14312322 | 14307538 | ID=MS.gene09288.t1;Parent=MS.gene09288 |
| chr4.1 | exon | 14312269 | 14312322 | 14312269 | ID=MS.gene09288.t1.exon1;Parent=MS.gene09288.t1 |
| chr4.1 | CDS | 14312269 | 14312322 | 14312269 | ID=cds.MS.gene09288.t1;Parent=MS.gene09288.t1 |
| chr4.1 | exon | 14311913 | 14312180 | 14311913 | ID=MS.gene09288.t1.exon2;Parent=MS.gene09288.t1 |
| chr4.1 | CDS | 14311913 | 14312180 | 14311913 | ID=cds.MS.gene09288.t1;Parent=MS.gene09288.t1 |
| chr4.1 | exon | 14311484 | 14311550 | 14311484 | ID=MS.gene09288.t1.exon3;Parent=MS.gene09288.t1 |
| chr4.1 | CDS | 14311484 | 14311550 | 14311484 | ID=cds.MS.gene09288.t1;Parent=MS.gene09288.t1 |
| chr4.1 | exon | 14311246 | 14311394 | 14311246 | ID=MS.gene09288.t1.exon4;Parent=MS.gene09288.t1 |
| chr4.1 | CDS | 14311246 | 14311394 | 14311246 | ID=cds.MS.gene09288.t1;Parent=MS.gene09288.t1 |
| chr4.1 | exon | 14309559 | 14309692 | 14309559 | ID=MS.gene09288.t1.exon5;Parent=MS.gene09288.t1 |
| chr4.1 | CDS | 14309559 | 14309692 | 14309559 | ID=cds.MS.gene09288.t1;Parent=MS.gene09288.t1 |
| chr4.1 | exon | 14309370 | 14309468 | 14309370 | ID=MS.gene09288.t1.exon6;Parent=MS.gene09288.t1 |
| chr4.1 | CDS | 14309370 | 14309468 | 14309370 | ID=cds.MS.gene09288.t1;Parent=MS.gene09288.t1 |
| chr4.1 | exon | 14309182 | 14309257 | 14309182 | ID=MS.gene09288.t1.exon7;Parent=MS.gene09288.t1 |
| chr4.1 | CDS | 14309182 | 14309257 | 14309182 | ID=cds.MS.gene09288.t1;Parent=MS.gene09288.t1 |
| chr4.1 | exon | 14307538 | 14307632 | 14307538 | ID=MS.gene09288.t1.exon8;Parent=MS.gene09288.t1 |
| chr4.1 | CDS | 14307538 | 14307632 | 14307538 | ID=cds.MS.gene09288.t1;Parent=MS.gene09288.t1 |
| Gene Sequence |
| Protein sequence |
