Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013613.t1 | XP_003602215.1 | 99.4 | 358 | 2 | 0 | 1 | 358 | 1 | 358 | 2.90E-208 | 734.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013613.t1 | Q94BN2 | 80.6 | 350 | 66 | 2 | 8 | 356 | 8 | 356 | 8.2e-167 | 587.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013613.t1 | G7J6T4 | 99.4 | 358 | 2 | 0 | 1 | 358 | 1 | 358 | 2.1e-208 | 734.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013613 | MS.gene42624 | PPI |
| MS.gene013613 | MS.gene014976 | PPI |
| MS.gene013613 | MS.gene051552 | PPI |
| MS.gene013613 | MS.gene32768 | PPI |
| MS.gene013613 | MS.gene058418 | PPI |
| MS.gene013613 | MS.gene016160 | PPI |
| MS.gene42684 | MS.gene013613 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013613.t1 | MTR_3g091090 | 99.441 | 358 | 2 | 0 | 1 | 358 | 1 | 358 | 0.0 | 738 |
| MS.gene013613.t1 | MTR_1g028360 | 80.938 | 341 | 61 | 2 | 17 | 357 | 25 | 361 | 0.0 | 548 |
| MS.gene013613.t1 | MTR_5g034470 | 68.167 | 311 | 82 | 4 | 44 | 353 | 44 | 338 | 1.50e-159 | 451 |
| MS.gene013613.t1 | MTR_8g063940 | 66.019 | 309 | 90 | 3 | 45 | 353 | 44 | 337 | 1.18e-154 | 438 |
| MS.gene013613.t1 | MTR_5g034470 | 68.243 | 296 | 77 | 3 | 44 | 338 | 44 | 323 | 8.46e-152 | 431 |
| MS.gene013613.t1 | MTR_3g078190 | 58.719 | 281 | 92 | 4 | 75 | 350 | 50 | 311 | 3.04e-112 | 330 |
| MS.gene013613.t1 | MTR_5g006140 | 33.645 | 214 | 134 | 6 | 95 | 303 | 51 | 261 | 4.57e-33 | 125 |
| MS.gene013613.t1 | MTR_5g006140 | 33.491 | 212 | 133 | 6 | 95 | 301 | 51 | 259 | 8.65e-33 | 123 |
| MS.gene013613.t1 | MTR_1g015300 | 29.078 | 282 | 189 | 8 | 83 | 358 | 46 | 322 | 2.52e-29 | 115 |
| MS.gene013613.t1 | MTR_3g104960 | 28.241 | 216 | 138 | 7 | 95 | 305 | 60 | 263 | 2.53e-19 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene013613.t1 | AT5G53120 | 80.571 | 350 | 66 | 2 | 8 | 356 | 8 | 356 | 0.0 | 560 |
| MS.gene013613.t1 | AT5G53120 | 80.571 | 350 | 66 | 2 | 8 | 356 | 8 | 356 | 0.0 | 560 |
| MS.gene013613.t1 | AT5G53120 | 80.571 | 350 | 66 | 2 | 8 | 356 | 8 | 356 | 0.0 | 560 |
| MS.gene013613.t1 | AT5G53120 | 80.571 | 350 | 66 | 2 | 8 | 356 | 8 | 356 | 0.0 | 560 |
| MS.gene013613.t1 | AT5G53120 | 80.571 | 350 | 66 | 2 | 8 | 356 | 8 | 356 | 0.0 | 560 |
| MS.gene013613.t1 | AT5G53120 | 80.571 | 350 | 66 | 2 | 8 | 356 | 25 | 373 | 0.0 | 559 |
| MS.gene013613.t1 | AT5G53120 | 72.679 | 377 | 74 | 4 | 8 | 356 | 8 | 383 | 0.0 | 551 |
| MS.gene013613.t1 | AT1G23820 | 66.775 | 307 | 86 | 2 | 44 | 350 | 36 | 326 | 4.00e-158 | 447 |
| MS.gene013613.t1 | AT1G70310 | 65.472 | 307 | 92 | 2 | 44 | 350 | 40 | 332 | 9.09e-154 | 436 |
| MS.gene013613.t1 | AT1G23820 | 60.839 | 286 | 92 | 2 | 14 | 293 | 44 | 315 | 1.33e-128 | 372 |
| MS.gene013613.t1 | AT5G19530 | 28.968 | 252 | 171 | 6 | 57 | 303 | 14 | 262 | 1.78e-32 | 124 |
| MS.gene013613.t1 | AT5G19530 | 28.968 | 252 | 171 | 6 | 57 | 303 | 21 | 269 | 2.23e-32 | 124 |
Find 97 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCACTCTACCGTTGTTTC+GGG | 0.194129 | 3.4:-83484185 | MS.gene013613:CDS |
| GTGGAGATGGTGGGGTTCTA+AGG | 0.243049 | 3.4:-83482882 | MS.gene013613:CDS |
| ATTTGTCGAGAAACATTTAA+AGG | 0.261361 | 3.4:-83481206 | MS.gene013613:CDS |
| TTGTCACTCTACCGTTGTTT+CGG | 0.279338 | 3.4:-83484186 | MS.gene013613:CDS |
| CGGTGGAGTTCTTTGTAATA+TGG | 0.303405 | 3.4:-83481276 | MS.gene013613:CDS |
| TCTTCTCTACTTTGATTGAA+TGG | 0.326205 | 3.4:+83483563 | None:intergenic |
| CCTTCCCATCCATAGTCTTC+TGG | 0.342826 | 3.4:+83484291 | None:intergenic |
| ATGGTTTCTCTACAAGTTCC+TGG | 0.346919 | 3.4:+83481330 | None:intergenic |
| CTTCTCTACTTTGATTGAAT+GGG | 0.348057 | 3.4:+83483564 | None:intergenic |
| TGGAGAGCATGTCTTGAATA+AGG | 0.362663 | 3.4:+83481228 | None:intergenic |
| TTAGTTGTTGGTGGTGGAGA+TGG | 0.363986 | 3.4:-83482895 | MS.gene013613:CDS |
| ATAAGCATCGGAGGAATCTT+AGG | 0.367711 | 3.4:-83480404 | MS.gene013613:CDS |
| TTTAAATGTTTCTCGACAAA+TGG | 0.372736 | 3.4:+83481208 | None:intergenic |
| TGACAATTGGCCTCCAACTC+AGG | 0.374602 | 3.4:+83484203 | None:intergenic |
| GGGAAAGTTCTTGTACTTGA+TGG | 0.375756 | 3.4:-83483399 | MS.gene013613:CDS |
| TTGGTATGCAGTGGTGTGAT+AGG | 0.380687 | 3.4:-83480507 | MS.gene013613:intron |
| GTTGTTGGTGGTGGAGATGG+TGG | 0.389147 | 3.4:-83482892 | MS.gene013613:CDS |
| TTGTTGGTGGTGGAGATGGT+GGG | 0.396225 | 3.4:-83482891 | MS.gene013613:CDS |
| GGCTTCAGCCCCTGAGTTGG+AGG | 0.399000 | 3.4:-83484213 | MS.gene013613:CDS |
| AATCCCATTGAAAAGTTAGA+AGG | 0.400616 | 3.4:-83480432 | MS.gene013613:CDS |
| TGGATGGGAAGGCGAGTAAC+AGG | 0.416616 | 3.4:-83484280 | MS.gene013613:CDS |
| ACGGCGTCATACCTCCCTTC+AGG | 0.420015 | 3.4:+83482494 | None:intergenic |
| GTCACTGTACCAAGAGGTCT+TGG | 0.430881 | 3.4:-83483524 | MS.gene013613:CDS |
| AACAGTCACCTGGCCACATT+GGG | 0.439358 | 3.4:+83483995 | None:intergenic |
| TTTGGAATGCCAGAAGACTA+TGG | 0.441748 | 3.4:-83484300 | MS.gene013613:CDS |
| GGCGAGTAACAGGAATGGTT+TGG | 0.443384 | 3.4:-83484270 | MS.gene013613:CDS |
| TTCTCTACAAGTTCCTGGGC+AGG | 0.463913 | 3.4:+83481335 | None:intergenic |
| GGAAAGTTCTTGTACTTGAT+GGG | 0.470422 | 3.4:-83483398 | MS.gene013613:CDS |
| TCAGCATCTCAAACTTGCTC+TGG | 0.472000 | 3.4:-83484155 | MS.gene013613:intron |
| TTCAACAACCCAATGTGGCC+AGG | 0.474309 | 3.4:-83484003 | MS.gene013613:intron |
| ACCTCATTCTTCAGAAATGC+AGG | 0.477276 | 3.4:+83480204 | None:intergenic |
| TGTTGGTGGTGGAGATGGTG+GGG | 0.479762 | 3.4:-83482890 | MS.gene013613:CDS |
| GGACGCCGTAGAAAGAGGTT+TGG | 0.482254 | 3.4:-83484318 | MS.gene013613:CDS |
| ATCTGAGGAATCAACAATTA+CGG | 0.484857 | 3.4:+83482475 | None:intergenic |
| TATTTGTGAGATAGATAAGA+TGG | 0.498631 | 3.4:-83482824 | MS.gene013613:CDS |
| GCATTCCAAACCTCTTTCTA+CGG | 0.502649 | 3.4:+83484313 | None:intergenic |
| AAGGTTCTGTACATTATGCA+TGG | 0.503330 | 3.4:-83481187 | MS.gene013613:CDS |
| GTAATATGGCAGAAAGTATG+TGG | 0.507464 | 3.4:-83481262 | MS.gene013613:CDS |
| CAACTCAGGGGCTGAAGCCA+TGG | 0.509823 | 3.4:+83484217 | None:intergenic |
| TTCATGTTGTTTGAAAGCCA+TGG | 0.510589 | 3.4:-83484234 | MS.gene013613:CDS |
| TGGAGATGGTGGGGTTCTAA+GGG | 0.514791 | 3.4:-83482881 | MS.gene013613:CDS |
| TGGTATGCAGTGGTGTGATA+GGG | 0.519393 | 3.4:-83480506 | MS.gene013613:intron |
| AAACTCTACCTTGGATATGT+TGG | 0.521419 | 3.4:+83481155 | None:intergenic |
| GAATGCCAGAAGACTATGGA+TGG | 0.522599 | 3.4:-83484296 | MS.gene013613:CDS |
| TAACAGTCACCTGGCCACAT+TGG | 0.523868 | 3.4:+83483994 | None:intergenic |
| AACAACGGTAGAGTGACAAT+TGG | 0.525820 | 3.4:+83484190 | None:intergenic |
| AAAGGATGAATGTGCTTACC+AGG | 0.527996 | 3.4:-83483358 | MS.gene013613:CDS |
| TTTCTTAAACGTGCACCTGA+AGG | 0.534171 | 3.4:-83482509 | MS.gene013613:CDS |
| GACAATTGGCCTCCAACTCA+GGG | 0.536122 | 3.4:+83484204 | None:intergenic |
| TCAAAGCCAACAGCTAACTC+TGG | 0.546141 | 3.4:+83482703 | None:intergenic |
| GGAGATGAGCTATCATCTCC+TGG | 0.549717 | 3.4:+83483340 | None:intergenic |
| TTCTTAAACGTGCACCTGAA+GGG | 0.550495 | 3.4:-83482508 | MS.gene013613:CDS |
| TGGTTTCTCTACAAGTTCCT+GGG | 0.552051 | 3.4:+83481331 | None:intergenic |
| TTTCTTCTATGCTCAACAGA+GGG | 0.553053 | 3.4:-83480483 | MS.gene013613:CDS |
| CATGGCTTCAGCCCCTGAGT+TGG | 0.564808 | 3.4:-83484216 | MS.gene013613:CDS |
| TGTTGATTCCTCAGATCCTG+TGG | 0.566155 | 3.4:-83482468 | MS.gene013613:CDS |
| GGGACGGAATGGAACAGAGG+GGG | 0.567127 | 3.4:+83483319 | None:intergenic |
| CATATTACAAAGAACTCCAC+CGG | 0.568035 | 3.4:+83481277 | None:intergenic |
| TATGCTCCACAGAGCTGTGG+CGG | 0.569419 | 3.4:+83482851 | None:intergenic |
| AGGTTCTGTACATTATGCAT+GGG | 0.569562 | 3.4:-83481186 | MS.gene013613:CDS |
| TTGTAATTTAGGTCCTGCCC+AGG | 0.572216 | 3.4:-83481348 | MS.gene013613:intron |
| ATGCTCCACAGAGCTGTGGC+GGG | 0.576101 | 3.4:+83482852 | None:intergenic |
| CCAGAAGACTATGGATGGGA+AGG | 0.584299 | 3.4:-83484291 | MS.gene013613:CDS |
| TAACAGGAATGGTTTGGAGA+AGG | 0.585433 | 3.4:-83484264 | MS.gene013613:CDS |
| GATTGTTCAGTTGACTGAAA+AGG | 0.585805 | 3.4:-83483376 | MS.gene013613:CDS |
| CTATCTAAGGCATTAAGACC+CGG | 0.594959 | 3.4:-83481296 | MS.gene013613:CDS |
| TTACTCACCCACAGGATCTG+AGG | 0.608698 | 3.4:+83482460 | None:intergenic |
| TAGAAGGTGCTGATAAGCAT+CGG | 0.610775 | 3.4:-83480416 | MS.gene013613:CDS |
| ACTCTACCGTTGTTTCGGGG+TGG | 0.610888 | 3.4:-83484181 | MS.gene013613:CDS |
| GTACACTTGCATGTTGGTGA+TGG | 0.618204 | 3.4:-83482670 | MS.gene013613:intron |
| GTCACTCTACCGTTGTTTCG+GGG | 0.620935 | 3.4:-83484184 | MS.gene013613:CDS |
| GCCTGCATTTCTGAAGAATG+AGG | 0.621479 | 3.4:-83480205 | MS.gene013613:CDS |
| ATGGCTTTCAAACAACATGA+AGG | 0.623348 | 3.4:+83484236 | None:intergenic |
| CAAGCAAGCATTGCTACTGA+CGG | 0.624255 | 3.4:+83480172 | None:intergenic |
| TTTATTTCAACAACCCAATG+TGG | 0.626443 | 3.4:-83484008 | MS.gene013613:CDS |
| CAAGTGTTCCAACATATCCA+AGG | 0.643163 | 3.4:-83481163 | MS.gene013613:intron |
| CAATATGCTCCACAGAGCTG+TGG | 0.644313 | 3.4:+83482848 | None:intergenic |
| TTCTTCTATGCTCAACAGAG+GGG | 0.645049 | 3.4:-83480482 | MS.gene013613:CDS |
| GTTTCTTCTATGCTCAACAG+AGG | 0.646189 | 3.4:-83480484 | MS.gene013613:CDS |
| TTAAACGTGCACCTGAAGGG+AGG | 0.651100 | 3.4:-83482505 | MS.gene013613:CDS |
| TCTTATGCAGATACATACAG+CGG | 0.652959 | 3.4:-83480238 | MS.gene013613:intron |
| AGTATCCCGCCACAGCTCTG+TGG | 0.654087 | 3.4:-83482857 | MS.gene013613:CDS |
| GGGAAGGCGAGTAACAGGAA+TGG | 0.657558 | 3.4:-83484275 | MS.gene013613:CDS |
| GGGTTCACAAAATCAACATG+CGG | 0.658739 | 3.4:+83480459 | None:intergenic |
| CCTCGTGTACACTTGCATGT+TGG | 0.668273 | 3.4:-83482676 | MS.gene013613:CDS |
| AGAAAAGTCACTGTACCAAG+AGG | 0.670694 | 3.4:-83483530 | MS.gene013613:CDS |
| AATGCCAGAAGACTATGGAT+GGG | 0.672149 | 3.4:-83484295 | MS.gene013613:CDS |
| CCAACATGCAAGTGTACACG+AGG | 0.673468 | 3.4:+83482676 | None:intergenic |
| TGAGAACCACCCCGAAACAA+CGG | 0.682894 | 3.4:+83484175 | None:intergenic |
| GTTGATTCCTCAGATCCTGT+GGG | 0.684990 | 3.4:-83482467 | MS.gene013613:intron |
| ATATTACAAAGAACTCCACC+GGG | 0.685339 | 3.4:+83481278 | None:intergenic |
| GGGGACGGAATGGAACAGAG+GGG | 0.690224 | 3.4:+83483318 | None:intergenic |
| AAGGTGCTGATAAGCATCGG+AGG | 0.691606 | 3.4:-83480413 | MS.gene013613:CDS |
| TCTTAGGTTCTATAACTCAG+AGG | 0.692345 | 3.4:-83480388 | MS.gene013613:intron |
| ACAATTGGCCTCCAACTCAG+GGG | 0.704373 | 3.4:+83484205 | None:intergenic |
| TCTAAGGCATTAAGACCCGG+TGG | 0.706210 | 3.4:-83481293 | MS.gene013613:CDS |
| CATTTCTGAAGAATGAGGTG+AGG | 0.708001 | 3.4:-83480200 | MS.gene013613:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTTAAATAAATACAATATA+TGG | + | chr3.4:83484158-83484177 | None:intergenic | 10.0% |
| !! | TCTAAAAAAGTTAAAAATTT+AGG | - | chr3.4:83483707-83483726 | MS.gene013613:intron | 10.0% |
| !!! | TAGTTCAATATAAATATTTT+AGG | + | chr3.4:83483029-83483048 | None:intergenic | 10.0% |
| !! | TCTGATTTATCTATTTATTT+AGG | + | chr3.4:83482454-83482473 | None:intergenic | 15.0% |
| !! | TGAGTAATTTAAATTCAAAA+TGG | - | chr3.4:83482064-83482083 | MS.gene013613:intron | 15.0% |
| !!! | AATTTTTATGTTGTTAATTC+AGG | - | chr3.4:83481588-83481607 | MS.gene013613:intron | 15.0% |
| !!! | ATATCTTTGAAAATAACTTT+TGG | - | chr3.4:83480759-83480778 | MS.gene013613:intron | 15.0% |
| !!! | CTTTGTTATAATTGAATTTT+TGG | - | chr3.4:83483821-83483840 | MS.gene013613:intron | 15.0% |
| !!! | TTCTTTAAAAGTAAAATCAA+AGG | + | chr3.4:83483428-83483447 | None:intergenic | 15.0% |
| !! | AAAATATTAAAGAATAGAGC+AGG | + | chr3.4:83481410-83481429 | None:intergenic | 20.0% |
| !! | AAACAATATGAAAGAAATCA+CGG | + | chr3.4:83482889-83482908 | None:intergenic | 20.0% |
| !! | CATAAAAATTATTTAGCAGA+CGG | + | chr3.4:83481578-83481597 | None:intergenic | 20.0% |
| !! | CATTACATGAAATTAATAAG+TGG | + | chr3.4:83483075-83483094 | None:intergenic | 20.0% |
| !! | GAATAAAAAGAGAACAATAT+AGG | + | chr3.4:83481033-83481052 | None:intergenic | 20.0% |
| !!! | AAATTTTGCAACAAAATATC+AGG | - | chr3.4:83484192-83484211 | MS.gene013613:CDS | 20.0% |
| !!! | ACTAAACATGATTGTAATTT+TGG | - | chr3.4:83483929-83483948 | MS.gene013613:intron | 20.0% |
| !!! | AGATACTGATTCATATTTAT+AGG | - | chr3.4:83482411-83482430 | MS.gene013613:intron | 20.0% |
| !!! | ATCAAAAGACTTTACATTTT+TGG | + | chr3.4:83481215-83481234 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTTGGTTTAAGA+AGG | - | chr3.4:83483831-83483850 | MS.gene013613:intron | 20.0% |
| !!! | ATTTTAGGAACAAAAATTCA+GGG | + | chr3.4:83483014-83483033 | None:intergenic | 20.0% |
| !!! | CAATATCACTTTTGTAATTT+AGG | - | chr3.4:83483149-83483168 | MS.gene013613:intron | 20.0% |
| !!! | GATACTCTAAAATTATAAAG+TGG | - | chr3.4:83482530-83482549 | MS.gene013613:intron | 20.0% |
| !!! | GATACTGATTCATATTTATA+GGG | - | chr3.4:83482412-83482431 | MS.gene013613:intron | 20.0% |
| !!! | TAATTTTTGTGTGTATATGA+CGG | - | chr3.4:83480882-83480901 | MS.gene013613:intron | 20.0% |
| !!! | TATTTTAGGAACAAAAATTC+AGG | + | chr3.4:83483015-83483034 | None:intergenic | 20.0% |
| !!! | TCAAAAGACTTTACATTTTT+GGG | + | chr3.4:83481214-83481233 | None:intergenic | 20.0% |
| !!! | TGGGTTTTAGATAAAAAAAA+AGG | - | chr3.4:83482326-83482345 | MS.gene013613:intron | 20.0% |
| !!! | TTTCTTTCATATTGTTTTGT+TGG | - | chr3.4:83482892-83482911 | MS.gene013613:CDS | 20.0% |
| !!! | TTTTACAGTCATTAACATAT+GGG | - | chr3.4:83481089-83481108 | MS.gene013613:intron | 20.0% |
| !!! | TTTTTACAGTCATTAACATA+TGG | - | chr3.4:83481088-83481107 | MS.gene013613:intron | 20.0% |
| !!! | TTTTTTTACAGAAAAATCAG+AGG | - | chr3.4:83480471-83480490 | MS.gene013613:CDS | 20.0% |
| ! | AAATTGCTTAACTAGATCAT+TGG | - | chr3.4:83482261-83482280 | MS.gene013613:intron | 25.0% |
| ! | AACAAAAATTCAGGGAAAAT+CGG | + | chr3.4:83483006-83483025 | None:intergenic | 25.0% |
| ! | ACAAAATATTGAAGTAACGT+TGG | - | chr3.4:83481284-83481303 | MS.gene013613:CDS | 25.0% |
| ! | ACAAAATTTGTGATTATGGT+TGG | - | chr3.4:83483574-83483593 | MS.gene013613:intron | 25.0% |
| ! | ACACACAAAAATTACATACT+TGG | + | chr3.4:83480876-83480895 | None:intergenic | 25.0% |
| ! | ATAGTTCTCTATTATCACTT+AGG | - | chr3.4:83481322-83481341 | MS.gene013613:CDS | 25.0% |
| ! | ATCAAACTTACTACATATTG+TGG | - | chr3.4:83480817-83480836 | MS.gene013613:intron | 25.0% |
| ! | ATGAAATGAACTTATTGCAA+TGG | - | chr3.4:83481753-83481772 | MS.gene013613:intron | 25.0% |
| ! | ATGACTTTAGATTGTTTCAT+TGG | - | chr3.4:83482811-83482830 | MS.gene013613:intron | 25.0% |
| ! | ATGGTTATTGATGTAAGTTA+TGG | - | chr3.4:83481703-83481722 | MS.gene013613:intron | 25.0% |
| ! | ATTTGTCGAGAAACATTTAA+AGG | - | chr3.4:83483302-83483321 | MS.gene013613:intron | 25.0% |
| ! | CAGTAAATAATGCACATTAT+TGG | - | chr3.4:83482154-83482173 | MS.gene013613:intron | 25.0% |
| ! | CTGAAATTTCTCATAAATGA+AGG | + | chr3.4:83482789-83482808 | None:intergenic | 25.0% |
| ! | GAGATACTATTAGATATTGA+AGG | - | chr3.4:83482590-83482609 | MS.gene013613:intron | 25.0% |
| ! | GTTAATCACTTCTCATTTAT+AGG | + | chr3.4:83481058-83481077 | None:intergenic | 25.0% |
| ! | TAAAAATAACCAACCAGAAA+AGG | + | chr3.4:83483118-83483137 | None:intergenic | 25.0% |
| ! | TAGTTCTCTATTATCACTTA+GGG | - | chr3.4:83481323-83481342 | MS.gene013613:CDS | 25.0% |
| ! | TATGTATCTGCATAAGAAAA+GGG | + | chr3.4:83484267-83484286 | None:intergenic | 25.0% |
| ! | TATTTGTGAGATAGATAAGA+TGG | - | chr3.4:83481684-83481703 | MS.gene013613:intron | 25.0% |
| ! | TTAGATAGAGTCTCAAAAAA+TGG | + | chr3.4:83483200-83483219 | None:intergenic | 25.0% |
| ! | TTATCATCTTGACAATGTAT+TGG | - | chr3.4:83481437-83481456 | MS.gene013613:intron | 25.0% |
| ! | TTTAAATGTTTCTCGACAAA+TGG | + | chr3.4:83483303-83483322 | None:intergenic | 25.0% |
| ! | TTTGTAACATTTACAACAAG+TGG | + | chr3.4:83483644-83483663 | None:intergenic | 25.0% |
| !! | AAACAAAAGATTGTTGTTAG+TGG | + | chr3.4:83480437-83480456 | None:intergenic | 25.0% |
| !! | AACCATAATCACAAATTTTG+TGG | + | chr3.4:83483575-83483594 | None:intergenic | 25.0% |
| !! | ACCATAATCACAAATTTTGT+GGG | + | chr3.4:83483574-83483593 | None:intergenic | 25.0% |
| !! | AGTTAGTTATGTTAGTTTCA+GGG | + | chr3.4:83482639-83482658 | None:intergenic | 25.0% |
| !! | CAAAAGACTTTACATTTTTG+GGG | + | chr3.4:83481213-83481232 | None:intergenic | 25.0% |
| !! | TAGTTAGTTATGTTAGTTTC+AGG | + | chr3.4:83482640-83482659 | None:intergenic | 25.0% |
| !! | TCTATATTTTCTCACTAGTA+TGG | - | chr3.4:83482238-83482257 | MS.gene013613:intron | 25.0% |
| !! | TTACTGGTTACAAACTATTA+AGG | - | chr3.4:83481921-83481940 | MS.gene013613:intron | 25.0% |
| !! | TTTGTAACATTTTCAACAAG+TGG | + | chr3.4:83483681-83483700 | None:intergenic | 25.0% |
| !!! | AAAAGACTTTACATTTTTGG+GGG | + | chr3.4:83481212-83481231 | None:intergenic | 25.0% |
| !!! | AAGGGTAATTTTTTTTACAG+TGG | - | chr3.4:83483490-83483509 | MS.gene013613:intron | 25.0% |
| !!! | AGGGTAATTTTTTTTACAGT+GGG | - | chr3.4:83483491-83483510 | MS.gene013613:intron | 25.0% |
| !!! | AGTATCTTTTTTGTCTTTGA+TGG | + | chr3.4:83482683-83482702 | None:intergenic | 25.0% |
| !!! | ATTTTTTGAGACTCTATCTA+AGG | - | chr3.4:83483199-83483218 | MS.gene013613:intron | 25.0% |
| !!! | GTATCTTTTTTGTCTTTGAT+GGG | + | chr3.4:83482682-83482701 | None:intergenic | 25.0% |
| !!! | TATTGCAATGGTTATTTTGT+AGG | - | chr3.4:83481765-83481784 | MS.gene013613:intron | 25.0% |
| !!! | TTAATTCAGGTTTTAGTTGT+TGG | - | chr3.4:83481601-83481620 | MS.gene013613:intron | 25.0% |
| AAAAATTATTTAGCAGACGG+TGG | + | chr3.4:83481575-83481594 | None:intergenic | 30.0% | |
| AATCATGTTTAGTAACTGTC+AGG | + | chr3.4:83483922-83483941 | None:intergenic | 30.0% | |
| AATCCCATTGAAAAGTTAGA+AGG | - | chr3.4:83484076-83484095 | MS.gene013613:intron | 30.0% | |
| AATTCAATAGCTGGCAAAAA+TGG | + | chr3.4:83481981-83482000 | None:intergenic | 30.0% | |
| AATTTAAATTACTCACCCAC+AGG | + | chr3.4:83482059-83482078 | None:intergenic | 30.0% | |
| ACATGTAGAAACAGAAAACT+TGG | + | chr3.4:83483461-83483480 | None:intergenic | 30.0% | |
| AGTTCTCTATTATCACTTAG+GGG | - | chr3.4:83481324-83481343 | MS.gene013613:CDS | 30.0% | |
| ATATTGAAGGAGTTTGAAAG+AGG | - | chr3.4:83482603-83482622 | MS.gene013613:intron | 30.0% | |
| ATCATGTTTAGTAACTGTCA+GGG | + | chr3.4:83483921-83483940 | None:intergenic | 30.0% | |
| ATCTGAGGAATCAACAATTA+CGG | + | chr3.4:83482036-83482055 | None:intergenic | 30.0% | |
| ATGTTCAGTAAGCACATTAT+TGG | - | chr3.4:83482097-83482116 | MS.gene013613:intron | 30.0% | |
| ATTCAATAGCTGGCAAAAAT+GGG | + | chr3.4:83481980-83481999 | None:intergenic | 30.0% | |
| CAGTAAATTAAAGCCATAGT+TGG | + | chr3.4:83481907-83481926 | None:intergenic | 30.0% | |
| CGTTTAAGAAATTCAATAGC+TGG | + | chr3.4:83481990-83482009 | None:intergenic | 30.0% | |
| CTTCTCTACTTTGATTGAAT+GGG | + | chr3.4:83480947-83480966 | None:intergenic | 30.0% | |
| GAAAGGAAATGGGAAATATT+TGG | + | chr3.4:83480410-83480429 | None:intergenic | 30.0% | |
| GAGACTGACTAAAATTTGAA+AGG | - | chr3.4:83481503-83481522 | MS.gene013613:intron | 30.0% | |
| GTATGTATCTGCATAAGAAA+AGG | + | chr3.4:83484268-83484287 | None:intergenic | 30.0% | |
| GTTTACACTATTCAAATTGC+TGG | - | chr3.4:83483372-83483391 | MS.gene013613:CDS | 30.0% | |
| TCCCACAAAATTTGTGATTA+TGG | - | chr3.4:83483570-83483589 | MS.gene013613:CDS | 30.0% | |
| TCTTCTCTACTTTGATTGAA+TGG | + | chr3.4:83480948-83480967 | None:intergenic | 30.0% | |
| TGCTTATTGTATTCCTTTCT+TGG | - | chr3.4:83483982-83484001 | MS.gene013613:intron | 30.0% | |
| TGGTCTAATGAGATAAACTA+AGG | - | chr3.4:83482550-83482569 | MS.gene013613:intron | 30.0% | |
| TGTGTTAGATTGAGATACAA+GGG | + | chr3.4:83482293-83482312 | None:intergenic | 30.0% | |
| TTCATGTATACTTGCAACTT+TGG | - | chr3.4:83480561-83480580 | MS.gene013613:intron | 30.0% | |
| TTTATTTCAACAACCCAATG+TGG | - | chr3.4:83480500-83480519 | MS.gene013613:intron | 30.0% | |
| ! | AAAGATTGTTGTTAGTGGAA+TGG | + | chr3.4:83480432-83480451 | None:intergenic | 30.0% |
| ! | AACATTTAGTTTATCCTCCT+TGG | + | chr3.4:83480785-83480804 | None:intergenic | 30.0% |
| ! | AACTTTTCAATGGGATTGAT+GGG | + | chr3.4:83484073-83484092 | None:intergenic | 30.0% |
| ! | AGATTTTTACTTGCCTAGTT+TGG | - | chr3.4:83483858-83483877 | MS.gene013613:intron | 30.0% |
| ! | ATGAAAAAAGTCGTGTTTTG+AGG | - | chr3.4:83482211-83482230 | MS.gene013613:intron | 30.0% |
| ! | GAGTTAGATTATTCCTTTTC+TGG | - | chr3.4:83483102-83483121 | MS.gene013613:intron | 30.0% |
| ! | GTTAGTTATGTTAGTTTCAG+GGG | + | chr3.4:83482638-83482657 | None:intergenic | 30.0% |
| ! | TAACTTTTCAATGGGATTGA+TGG | + | chr3.4:83484074-83484093 | None:intergenic | 30.0% |
| ! | TTGAAAATAACTTTTGGCCA+AGG | - | chr3.4:83480765-83480784 | MS.gene013613:intron | 30.0% |
| ! | TTGGTTCATCTTGATAGTAT+TGG | - | chr3.4:83483948-83483967 | MS.gene013613:intron | 30.0% |
| !! | CAACTATGGCTTTAATTTAC+TGG | - | chr3.4:83481905-83481924 | MS.gene013613:intron | 30.0% |
| !! | TAGATTATTCCTTTTCTGGT+TGG | - | chr3.4:83483106-83483125 | MS.gene013613:intron | 30.0% |
| !! | TCTTGACAATGTATTGGTTA+TGG | - | chr3.4:83481443-83481462 | MS.gene013613:intron | 30.0% |
| !! | TGGTTATTTTGTAGGTTTCT+AGG | - | chr3.4:83481773-83481792 | MS.gene013613:intron | 30.0% |
| AAACTCTACCTTGGATATGT+TGG | + | chr3.4:83483356-83483375 | None:intergenic | 35.0% | |
| AACAGAGCTGATATGAATAG+TGG | + | chr3.4:83482745-83482764 | None:intergenic | 35.0% | |
| AAGGTTCTGTACATTATGCA+TGG | - | chr3.4:83483321-83483340 | MS.gene013613:CDS | 35.0% | |
| AATTACTGAAGATCCATCAG+TGG | + | chr3.4:83483545-83483564 | None:intergenic | 35.0% | |
| ACTAGGCAAGTAAAAATCTC+AGG | + | chr3.4:83483857-83483876 | None:intergenic | 35.0% | |
| AGGTTCTGTACATTATGCAT+GGG | - | chr3.4:83483322-83483341 | MS.gene013613:CDS | 35.0% | |
| ATAACTCAGAGGTAAGTATC+TGG | - | chr3.4:83484131-83484150 | MS.gene013613:intron | 35.0% | |
| ATATTACAAAGAACTCCACC+GGG | + | chr3.4:83483233-83483252 | None:intergenic | 35.0% | |
| ATATTCATCCTTCTCCATGA+AGG | + | chr3.4:83480706-83480725 | None:intergenic | 35.0% | |
| ATGCTCTTATATGTGTATGG+AGG | - | chr3.4:83481471-83481490 | MS.gene013613:intron | 35.0% | |
| ATGGCTTTCAAACAACATGA+AGG | + | chr3.4:83480275-83480294 | None:intergenic | 35.0% | |
| ATTACTGAAGATCCATCAGT+GGG | + | chr3.4:83483544-83483563 | None:intergenic | 35.0% | |
| ATTAGTGTGCTTAAAGGTTG+TGG | - | chr3.4:83483765-83483784 | MS.gene013613:intron | 35.0% | |
| CATATTACAAAGAACTCCAC+CGG | + | chr3.4:83483234-83483253 | None:intergenic | 35.0% | |
| CCAATGCTCTTATATGTGTA+TGG | - | chr3.4:83481468-83481487 | MS.gene013613:intron | 35.0% | |
| GAATAGTGTAAACTCTACCT+TGG | + | chr3.4:83483365-83483384 | None:intergenic | 35.0% | |
| GATCTGATCATCAGTGTATT+GGG | - | chr3.4:83481232-83481251 | MS.gene013613:CDS | 35.0% | |
| GATGGATCTTCAGTAATTGT+TGG | - | chr3.4:83483547-83483566 | MS.gene013613:CDS | 35.0% | |
| GATTGTTCAGTTGACTGAAA+AGG | - | chr3.4:83481132-83481151 | MS.gene013613:intron | 35.0% | |
| GGAAAGTTCTTGTACTTGAT+GGG | - | chr3.4:83481110-83481129 | MS.gene013613:intron | 35.0% | |
| GTGTGTTAGATTGAGATACA+AGG | + | chr3.4:83482294-83482313 | None:intergenic | 35.0% | |
| TAGATTGAGATACAAGGGTT+GGG | + | chr3.4:83482288-83482307 | None:intergenic | 35.0% | |
| TAGTGGAATGGAAAGGAAAT+GGG | + | chr3.4:83480420-83480439 | None:intergenic | 35.0% | |
| TCATGGAGAAGGATGAATAT+GGG | - | chr3.4:83480706-83480725 | MS.gene013613:intron | 35.0% | |
| TCTACATGTTGTGAGAGTAA+GGG | - | chr3.4:83483472-83483491 | MS.gene013613:intron | 35.0% | |
| TCTTAGGTTCTATAACTCAG+AGG | - | chr3.4:83484120-83484139 | MS.gene013613:intron | 35.0% | |
| TCTTATGCAGATACATACAG+CGG | - | chr3.4:83484270-83484289 | MS.gene013613:CDS | 35.0% | |
| TGATCTGATCATCAGTGTAT+TGG | - | chr3.4:83481231-83481250 | MS.gene013613:CDS | 35.0% | |
| TGGAAACAGTATGGGAAAAA+AGG | + | chr3.4:83481555-83481574 | None:intergenic | 35.0% | |
| TTAGATTGAGATACAAGGGT+TGG | + | chr3.4:83482289-83482308 | None:intergenic | 35.0% | |
| TTAGTGGAATGGAAAGGAAA+TGG | + | chr3.4:83480421-83480440 | None:intergenic | 35.0% | |
| TTCATGGAGAAGGATGAATA+TGG | - | chr3.4:83480705-83480724 | MS.gene013613:intron | 35.0% | |
| TTCTACATGTTGTGAGAGTA+AGG | - | chr3.4:83483471-83483490 | MS.gene013613:intron | 35.0% | |
| TTGAGACTGCTGAATATCAA+AGG | + | chr3.4:83481376-83481395 | None:intergenic | 35.0% | |
| TTTCACATTACCTTCTTGAG+AGG | - | chr3.4:83483793-83483812 | MS.gene013613:intron | 35.0% | |
| TTTCTTCTATGCTCAACAGA+GGG | - | chr3.4:83484025-83484044 | MS.gene013613:CDS | 35.0% | |
| ! | AAAATAACTTTTGGCCAAGG+AGG | - | chr3.4:83480768-83480787 | MS.gene013613:intron | 35.0% |
| ! | AACACACTTTTCGAAGATGT+GGG | - | chr3.4:83482307-83482326 | MS.gene013613:intron | 35.0% |
| ! | ACTTTTCAATGGGATTGATG+GGG | + | chr3.4:83484072-83484091 | None:intergenic | 35.0% |
| ! | AGCACCTTCTAACTTTTCAA+TGG | + | chr3.4:83484083-83484102 | None:intergenic | 35.0% |
| ! | CCATACACATATAAGAGCAT+TGG | + | chr3.4:83481471-83481490 | None:intergenic | 35.0% |
| ! | GCACCTTCTAACTTTTCAAT+GGG | + | chr3.4:83484082-83484101 | None:intergenic | 35.0% |
| ! | GTAATATGGCAGAAAGTATG+TGG | - | chr3.4:83483246-83483265 | MS.gene013613:intron | 35.0% |
| ! | GTGTTGCTGGAAAAATTCAT+AGG | - | chr3.4:83483598-83483617 | MS.gene013613:intron | 35.0% |
| ! | TAACACACTTTTCGAAGATG+TGG | - | chr3.4:83482306-83482325 | MS.gene013613:intron | 35.0% |
| ! | TTCATGTTGTTTGAAAGCCA+TGG | - | chr3.4:83480274-83480293 | MS.gene013613:intron | 35.0% |
| ! | TTGTTGTTAGTGGAATGGAA+AGG | + | chr3.4:83480427-83480446 | None:intergenic | 35.0% |
| ! | TTTGGTGTGTGTCTATCATT+AGG | - | chr3.4:83480916-83480935 | MS.gene013613:intron | 35.0% |
| !! | CAATCTTTTGTTTCATCGTG+TGG | - | chr3.4:83480444-83480463 | MS.gene013613:CDS | 35.0% |
| !! | GTTTGTTATCATGCCAACTA+TGG | - | chr3.4:83481891-83481910 | MS.gene013613:intron | 35.0% |
| !!! | AAAAAAGTCGTGTTTTGAGG+AGG | - | chr3.4:83482214-83482233 | MS.gene013613:intron | 35.0% |
| !!! | ATTCAGGTTTTAGTTGTTGG+TGG | - | chr3.4:83481604-83481623 | MS.gene013613:intron | 35.0% |
| !!! | TGGCATTTTGGAACAGTATA+GGG | - | chr3.4:83483878-83483897 | MS.gene013613:intron | 35.0% |
| !!! | TTGGCATTTTGGAACAGTAT+AGG | - | chr3.4:83483877-83483896 | MS.gene013613:intron | 35.0% |
| !!! | TTTTTTCCAGAGTTAGCTGT+TGG | - | chr3.4:83481799-83481818 | MS.gene013613:intron | 35.0% |
| AAAGGATGAATGTGCTTACC+AGG | - | chr3.4:83481150-83481169 | MS.gene013613:intron | 40.0% | |
| AACAACGGTAGAGTGACAAT+TGG | + | chr3.4:83480321-83480340 | None:intergenic | 40.0% | |
| AATAGCTGGCAAAAATGGGT+GGG | + | chr3.4:83481976-83481995 | None:intergenic | 40.0% | |
| AATGCCAGAAGACTATGGAT+GGG | - | chr3.4:83480213-83480232 | MS.gene013613:CDS | 40.0% | |
| ACCTCATTCTTCAGAAATGC+AGG | + | chr3.4:83484307-83484326 | None:intergenic | 40.0% | |
| AGAAAAGTCACTGTACCAAG+AGG | - | chr3.4:83480978-83480997 | MS.gene013613:intron | 40.0% | |
| AGATTGAGATACAAGGGTTG+GGG | + | chr3.4:83482287-83482306 | None:intergenic | 40.0% | |
| ATGGAGAAGGATGAATATGG+GGG | - | chr3.4:83480708-83480727 | MS.gene013613:intron | 40.0% | |
| ATGGTTTCTCTACAAGTTCC+TGG | + | chr3.4:83483181-83483200 | None:intergenic | 40.0% | |
| ATTCCTTTCTTGGTATGCAG+TGG | - | chr3.4:83483992-83484011 | MS.gene013613:intron | 40.0% | |
| CAAAGTGAATCCTCTCAAGA+AGG | + | chr3.4:83483806-83483825 | None:intergenic | 40.0% | |
| CAAGTGTTCCAACATATCCA+AGG | - | chr3.4:83483345-83483364 | MS.gene013613:CDS | 40.0% | |
| CATGGAGAAGGATGAATATG+GGG | - | chr3.4:83480707-83480726 | MS.gene013613:intron | 40.0% | |
| CGGTGGAGTTCTTTGTAATA+TGG | - | chr3.4:83483232-83483251 | MS.gene013613:intron | 40.0% | |
| CGTTGCATTAGTGTGCTTAA+AGG | - | chr3.4:83483759-83483778 | MS.gene013613:intron | 40.0% | |
| CTGTTCCAAAATGCCAAACT+AGG | + | chr3.4:83483874-83483893 | None:intergenic | 40.0% | |
| GCATTCCAAACCTCTTTCTA+CGG | + | chr3.4:83480198-83480217 | None:intergenic | 40.0% | |
| GGGAAAGTTCTTGTACTTGA+TGG | - | chr3.4:83481109-83481128 | MS.gene013613:intron | 40.0% | |
| GGGTTCACAAAATCAACATG+CGG | + | chr3.4:83484052-83484071 | None:intergenic | 40.0% | |
| GTAAGATCTTTCTTGCATGC+AGG | + | chr3.4:83484242-83484261 | None:intergenic | 40.0% | |
| GTGGGATCAACTTTATCATG+AGG | + | chr3.4:83483526-83483545 | None:intergenic | 40.0% | |
| GTTTCTTCTATGCTCAACAG+AGG | - | chr3.4:83484024-83484043 | MS.gene013613:CDS | 40.0% | |
| TGCAACGTGACAAACCAAAA+AGG | + | chr3.4:83483746-83483765 | None:intergenic | 40.0% | |
| TGGTTTCTCTACAAGTTCCT+GGG | + | chr3.4:83483180-83483199 | None:intergenic | 40.0% | |
| TGTGCAAAATAACAGTCACC+TGG | + | chr3.4:83480526-83480545 | None:intergenic | 40.0% | |
| TTCTTAAACGTGCACCTGAA+GGG | - | chr3.4:83482000-83482019 | MS.gene013613:intron | 40.0% | |
| TTCTTCTATGCTCAACAGAG+GGG | - | chr3.4:83484026-83484045 | MS.gene013613:CDS | 40.0% | |
| TTGAAGGAGTTTGAAAGAGG+AGG | - | chr3.4:83482606-83482625 | MS.gene013613:intron | 40.0% | |
| TTGTCACTCTACCGTTGTTT+CGG | - | chr3.4:83480322-83480341 | MS.gene013613:intron | 40.0% | |
| TTTCTTAAACGTGCACCTGA+AGG | - | chr3.4:83481999-83482018 | MS.gene013613:intron | 40.0% | |
| ! | ACTTGCCTAGTTTGGCATTT+TGG | - | chr3.4:83483866-83483885 | MS.gene013613:intron | 40.0% |
| ! | CATTTCTGAAGAATGAGGTG+AGG | - | chr3.4:83484308-83484327 | MS.gene013613:CDS | 40.0% |
| ! | CTATCTAAGGCATTAAGACC+CGG | - | chr3.4:83483212-83483231 | MS.gene013613:intron | 40.0% |
| ! | CTTGGTACAGTGACTTTTCT+TGG | + | chr3.4:83480978-83480997 | None:intergenic | 40.0% |
| ! | GATAAAGTTGATCCCACTGA+TGG | - | chr3.4:83483529-83483548 | MS.gene013613:CDS | 40.0% |
| ! | TAACAGGAATGGTTTGGAGA+AGG | - | chr3.4:83480244-83480263 | MS.gene013613:intron | 40.0% |
| ! | TGGAGAGCATGTCTTGAATA+AGG | + | chr3.4:83483283-83483302 | None:intergenic | 40.0% |
| ! | TTTGGAATGCCAGAAGACTA+TGG | - | chr3.4:83480208-83480227 | MS.gene013613:CDS | 40.0% |
| !! | ATAAGCATCGGAGGAATCTT+AGG | - | chr3.4:83484104-83484123 | MS.gene013613:intron | 40.0% |
| !! | CATATTGTTTTGTTGGCTGC+TGG | - | chr3.4:83482899-83482918 | MS.gene013613:CDS | 40.0% |
| !! | GACTTTACATTTTTGGGGGA+CGG | + | chr3.4:83481208-83481227 | None:intergenic | 40.0% |
| !! | TAGAAGGTGCTGATAAGCAT+CGG | - | chr3.4:83484092-83484111 | MS.gene013613:intron | 40.0% |
| !!! | AGGTCTTGGTTTTTGAGGTA+TGG | - | chr3.4:83480998-83481017 | MS.gene013613:intron | 40.0% |
| !!! | GGCATTTTGGAACAGTATAG+GGG | - | chr3.4:83483879-83483898 | MS.gene013613:intron | 40.0% |
| !!! | GGTGACTGTTATTTTGCACA+TGG | - | chr3.4:83480526-83480545 | MS.gene013613:intron | 40.0% |
| ACACCACTGCATACCAAGAA+AGG | + | chr3.4:83483998-83484017 | None:intergenic | 45.0% | |
| AGAAGGATGAATATGGGGGT+GGG | - | chr3.4:83480712-83480731 | MS.gene013613:intron | 45.0% | |
| CAATAGCTGGCAAAAATGGG+TGG | + | chr3.4:83481977-83481996 | None:intergenic | 45.0% | |
| CCTCAAAAACCAAGACCTCT+TGG | + | chr3.4:83480996-83481015 | None:intergenic | 45.0% | |
| CGTGACAAACCAAAAAGGCT+AGG | + | chr3.4:83483741-83483760 | None:intergenic | 45.0% | |
| GAATGCCAGAAGACTATGGA+TGG | - | chr3.4:83480212-83480231 | MS.gene013613:CDS | 45.0% | |
| GGAAAATCGGAGCAAAACGA+AGG | + | chr3.4:83482993-83483012 | None:intergenic | 45.0% | |
| GTGTGCTTAAAGGTTGTGGT+AGG | - | chr3.4:83483769-83483788 | MS.gene013613:intron | 45.0% | |
| GTTTAGTAACTGTCAGGGCA+CGG | + | chr3.4:83483916-83483935 | None:intergenic | 45.0% | |
| TCAAAGCCAACAGCTAACTC+TGG | + | chr3.4:83481808-83481827 | None:intergenic | 45.0% | |
| TGGGCAAATGTTAGCAGTGT+TGG | + | chr3.4:83482663-83482682 | None:intergenic | 45.0% | |
| TGGTATGCAGTGGTGTGATA+GGG | - | chr3.4:83484002-83484021 | MS.gene013613:intron | 45.0% | |
| TTGATACAACCGAGCCTTCA+TGG | - | chr3.4:83480689-83480708 | MS.gene013613:intron | 45.0% | |
| TTGGTATGCAGTGGTGTGAT+AGG | - | chr3.4:83484001-83484020 | MS.gene013613:intron | 45.0% | |
| TTGTAATTTAGGTCCTGCCC+AGG | - | chr3.4:83483160-83483179 | MS.gene013613:intron | 45.0% | |
| ! | GATTATGGTTGGTGTGTTGC+TGG | - | chr3.4:83483585-83483604 | MS.gene013613:intron | 45.0% |
| ! | GCCTGCATTTCTGAAGAATG+AGG | - | chr3.4:83484303-83484322 | MS.gene013613:CDS | 45.0% |
| ! | GTACACTTGCATGTTGGTGA+TGG | - | chr3.4:83481838-83481857 | MS.gene013613:intron | 45.0% |
| ! | GTTGATTCCTCAGATCCTGT+GGG | - | chr3.4:83482041-83482060 | MS.gene013613:intron | 45.0% |
| ! | TCAGCATCTCAAACTTGCTC+TGG | - | chr3.4:83480353-83480372 | MS.gene013613:intron | 45.0% |
| ! | TGTCACTCTACCGTTGTTTC+GGG | - | chr3.4:83480323-83480342 | MS.gene013613:intron | 45.0% |
| !! | CCAAGAGGTCTTGGTTTTTG+AGG | - | chr3.4:83480993-83481012 | MS.gene013613:intron | 45.0% |
| !! | GCAGTTGATCCTAGCCTTTT+TGG | - | chr3.4:83483729-83483748 | MS.gene013613:intron | 45.0% |
| !! | TACATTTTTGGGGGACGGAA+TGG | + | chr3.4:83481203-83481222 | None:intergenic | 45.0% |
| !! | TGTTGATTCCTCAGATCCTG+TGG | - | chr3.4:83482040-83482059 | MS.gene013613:intron | 45.0% |
| !! | TTAGTTGTTGGTGGTGGAGA+TGG | - | chr3.4:83481613-83481632 | MS.gene013613:intron | 45.0% |
| !!! | CAGGTTTTAGTTGTTGGTGG+TGG | - | chr3.4:83481607-83481626 | MS.gene013613:intron | 45.0% |
| AACAGTCACCTGGCCACATT+GGG | + | chr3.4:83480516-83480535 | None:intergenic | 50.0% | |
| AAGGATGAATATGGGGGTGG+GGG | - | chr3.4:83480714-83480733 | MS.gene013613:intron | 50.0% | |
| AGCAGACGGTGGAAACAGTA+TGG | + | chr3.4:83481564-83481583 | None:intergenic | 50.0% | |
| CAATATGCTCCACAGAGCTG+TGG | + | chr3.4:83481663-83481682 | None:intergenic | 50.0% | |
| CATCCTTCTCCATGAAGGCT+CGG | + | chr3.4:83480701-83480720 | None:intergenic | 50.0% | |
| CCAACATGCAAGTGTACACG+AGG | + | chr3.4:83481835-83481854 | None:intergenic | 50.0% | |
| CCAGAAGACTATGGATGGGA+AGG | - | chr3.4:83480217-83480236 | MS.gene013613:CDS | 50.0% | |
| CCTCGTGTACACTTGCATGT+TGG | - | chr3.4:83481832-83481851 | MS.gene013613:intron | 50.0% | |
| CCTTCCCATCCATAGTCTTC+TGG | + | chr3.4:83480220-83480239 | None:intergenic | 50.0% | |
| GAAGGATGAATATGGGGGTG+GGG | - | chr3.4:83480713-83480732 | MS.gene013613:intron | 50.0% | |
| GAGAAGGATGAATATGGGGG+TGG | - | chr3.4:83480711-83480730 | MS.gene013613:intron | 50.0% | |
| GCAGACGGTGGAAACAGTAT+GGG | + | chr3.4:83481563-83481582 | None:intergenic | 50.0% | |
| GGAGATGAGCTATCATCTCC+TGG | + | chr3.4:83481171-83481190 | None:intergenic | 50.0% | |
| GGCGAGTAACAGGAATGGTT+TGG | - | chr3.4:83480238-83480257 | MS.gene013613:intron | 50.0% | |
| GTCACTGTACCAAGAGGTCT+TGG | - | chr3.4:83480984-83481003 | MS.gene013613:intron | 50.0% | |
| GTGTATATGACGGCTGCTGA+TGG | - | chr3.4:83480892-83480911 | MS.gene013613:intron | 50.0% | |
| TAACAGTCACCTGGCCACAT+TGG | + | chr3.4:83480517-83480536 | None:intergenic | 50.0% | |
| TGAGAACCACCCCGAAACAA+CGG | + | chr3.4:83480336-83480355 | None:intergenic | 50.0% | |
| TTAAACGTGCACCTGAAGGG+AGG | - | chr3.4:83482003-83482022 | MS.gene013613:intron | 50.0% | |
| TTACTCACCCACAGGATCTG+AGG | + | chr3.4:83482051-83482070 | None:intergenic | 50.0% | |
| TTCAACAACCCAATGTGGCC+AGG | - | chr3.4:83480505-83480524 | MS.gene013613:intron | 50.0% | |
| TTCTCTACAAGTTCCTGGGC+AGG | + | chr3.4:83483176-83483195 | None:intergenic | 50.0% | |
| ! | ACAATTGGCCTCCAACTCAG+GGG | + | chr3.4:83480306-83480325 | None:intergenic | 50.0% |
| ! | ATGACGGCTGCTGATGGTTT+TGG | - | chr3.4:83480898-83480917 | MS.gene013613:intron | 50.0% |
| ! | GACAATTGGCCTCCAACTCA+GGG | + | chr3.4:83480307-83480326 | None:intergenic | 50.0% |
| ! | GTCACTCTACCGTTGTTTCG+GGG | - | chr3.4:83480324-83480343 | MS.gene013613:intron | 50.0% |
| ! | TCTAAGGCATTAAGACCCGG+TGG | - | chr3.4:83483215-83483234 | MS.gene013613:intron | 50.0% |
| ! | TGACAATTGGCCTCCAACTC+AGG | + | chr3.4:83480308-83480327 | None:intergenic | 50.0% |
| !! | AAGGTGCTGATAAGCATCGG+AGG | - | chr3.4:83484095-83484114 | MS.gene013613:intron | 50.0% |
| !! | TGGAGATGGTGGGGTTCTAA+GGG | - | chr3.4:83481627-83481646 | MS.gene013613:intron | 50.0% |
| !! | TTGTTGGTGGTGGAGATGGT+GGG | - | chr3.4:83481617-83481636 | MS.gene013613:intron | 50.0% |
| ATGAATATGGGGGTGGGGGA+AGG | - | chr3.4:83480718-83480737 | MS.gene013613:intron | 55.0% | |
| CAACCGAGCCTTCATGGAGA+AGG | - | chr3.4:83480695-83480714 | MS.gene013613:intron | 55.0% | |
| GGACGCCGTAGAAAGAGGTT+TGG | - | chr3.4:83480190-83480209 | MS.gene013613:CDS | 55.0% | |
| GGGAAGGCGAGTAACAGGAA+TGG | - | chr3.4:83480233-83480252 | MS.gene013613:intron | 55.0% | |
| TATGCTCCACAGAGCTGTGG+CGG | + | chr3.4:83481660-83481679 | None:intergenic | 55.0% | |
| TGGATGGGAAGGCGAGTAAC+AGG | - | chr3.4:83480228-83480247 | MS.gene013613:CDS | 55.0% | |
| ! | ACTCTACCGTTGTTTCGGGG+TGG | - | chr3.4:83480327-83480346 | MS.gene013613:intron | 55.0% |
| !! | GTGGAGATGGTGGGGTTCTA+AGG | - | chr3.4:83481626-83481645 | MS.gene013613:intron | 55.0% |
| !! | GTTGTTGGTGGTGGAGATGG+TGG | - | chr3.4:83481616-83481635 | MS.gene013613:intron | 55.0% |
| !! | TGTTGGTGGTGGAGATGGTG+GGG | - | chr3.4:83481618-83481637 | MS.gene013613:intron | 55.0% |
| ACGGCGTCATACCTCCCTTC+AGG | + | chr3.4:83482017-83482036 | None:intergenic | 60.0% | |
| AGTATCCCGCCACAGCTCTG+TGG | - | chr3.4:83481651-83481670 | MS.gene013613:intron | 60.0% | |
| ATGCTCCACAGAGCTGTGGC+GGG | + | chr3.4:83481659-83481678 | None:intergenic | 60.0% | |
| ATGGGGGACGCCGTAGAAAG+AGG | - | chr3.4:83480185-83480204 | MS.gene013613:CDS | 60.0% | |
| CAACTCAGGGGCTGAAGCCA+TGG | + | chr3.4:83480294-83480313 | None:intergenic | 60.0% | |
| CATGGCTTCAGCCCCTGAGT+TGG | - | chr3.4:83480292-83480311 | MS.gene013613:intron | 60.0% | |
| GGGACGGAATGGAACAGAGG+GGG | + | chr3.4:83481192-83481211 | None:intergenic | 60.0% | |
| GGGGACGGAATGGAACAGAG+GGG | + | chr3.4:83481193-83481212 | None:intergenic | 60.0% | |
| GGGGGACGGAATGGAACAGA+GGG | + | chr3.4:83481194-83481213 | None:intergenic | 60.0% | |
| TGGGGGACGGAATGGAACAG+AGG | + | chr3.4:83481195-83481214 | None:intergenic | 60.0% | |
| ! | GGCTTCAGCCCCTGAGTTGG+AGG | - | chr3.4:83480295-83480314 | MS.gene013613:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 83480185 | 83484345 | 83480185 | ID=MS.gene013613 |
| chr3.4 | mRNA | 83480185 | 83484345 | 83480185 | ID=MS.gene013613.t1;Parent=MS.gene013613 |
| chr3.4 | exon | 83484156 | 83484345 | 83484156 | ID=MS.gene013613.t1.exon1;Parent=MS.gene013613.t1 |
| chr3.4 | CDS | 83484156 | 83484345 | 83484156 | ID=cds.MS.gene013613.t1;Parent=MS.gene013613.t1 |
| chr3.4 | exon | 83484004 | 83484048 | 83484004 | ID=MS.gene013613.t1.exon2;Parent=MS.gene013613.t1 |
| chr3.4 | CDS | 83484004 | 83484048 | 83484004 | ID=cds.MS.gene013613.t1;Parent=MS.gene013613.t1 |
| chr3.4 | exon | 83483516 | 83483592 | 83483516 | ID=MS.gene013613.t1.exon3;Parent=MS.gene013613.t1 |
| chr3.4 | CDS | 83483516 | 83483592 | 83483516 | ID=cds.MS.gene013613.t1;Parent=MS.gene013613.t1 |
| chr3.4 | exon | 83483311 | 83483433 | 83483311 | ID=MS.gene013613.t1.exon4;Parent=MS.gene013613.t1 |
| chr3.4 | CDS | 83483311 | 83483433 | 83483311 | ID=cds.MS.gene013613.t1;Parent=MS.gene013613.t1 |
| chr3.4 | exon | 83482816 | 83482920 | 83482816 | ID=MS.gene013613.t1.exon5;Parent=MS.gene013613.t1 |
| chr3.4 | CDS | 83482816 | 83482920 | 83482816 | ID=cds.MS.gene013613.t1;Parent=MS.gene013613.t1 |
| chr3.4 | exon | 83482671 | 83482743 | 83482671 | ID=MS.gene013613.t1.exon6;Parent=MS.gene013613.t1 |
| chr3.4 | CDS | 83482671 | 83482743 | 83482671 | ID=cds.MS.gene013613.t1;Parent=MS.gene013613.t1 |
| chr3.4 | exon | 83482468 | 83482539 | 83482468 | ID=MS.gene013613.t1.exon7;Parent=MS.gene013613.t1 |
| chr3.4 | CDS | 83482468 | 83482539 | 83482468 | ID=cds.MS.gene013613.t1;Parent=MS.gene013613.t1 |
| chr3.4 | exon | 83481164 | 83481359 | 83481164 | ID=MS.gene013613.t1.exon8;Parent=MS.gene013613.t1 |
| chr3.4 | CDS | 83481164 | 83481359 | 83481164 | ID=cds.MS.gene013613.t1;Parent=MS.gene013613.t1 |
| chr3.4 | exon | 83480389 | 83480518 | 83480389 | ID=MS.gene013613.t1.exon9;Parent=MS.gene013613.t1 |
| chr3.4 | CDS | 83480389 | 83480518 | 83480389 | ID=cds.MS.gene013613.t1;Parent=MS.gene013613.t1 |
| chr3.4 | exon | 83480185 | 83480250 | 83480185 | ID=MS.gene013613.t1.exon10;Parent=MS.gene013613.t1 |
| chr3.4 | CDS | 83480185 | 83480250 | 83480185 | ID=cds.MS.gene013613.t1;Parent=MS.gene013613.t1 |
| Gene Sequence |
| Protein sequence |
